201 results on '"Bettecken, T"'
Search Results
2. Next Generation Sequencing in der diagnostischen Praxis: Von der Variante zum Befund
- Author
-
Bettecken, T., Pfeufer, A., Sudbrak, R., Siddiqui, R., Franke, A., Wienker, T.F., and Krawczak, M.
- Published
- 2014
- Full Text
- View/download PDF
3. TMEM132D, a new candidate for anxiety phenotypes: evidence from human and mouse studies
- Author
-
Erhardt, A, Czibere, L, Roeske, D, Lucae, S, Unschuld, P G, Ripke, S, Specht, M, Kohli, M A, Kloiber, S, Ising, M, Heck, A, Pfister, H, Zimmermann, P, Lieb, R, Pütz, B, Uhr, M, Weber, P, Deussing, J M, Gonik, M, Bunck, M, Keßler, M S, Frank, E, Hohoff, C, Domschke, K, Krakowitzky, P, Maier, W, Bandelow, B, Jacob, C, Deckert, J, Schreiber, S, Strohmaier, J, Nöthen, M, Cichon, S, Rietschel, M, Bettecken, T, Keck, M E, Landgraf, R, Müller-Myhsok, B, Holsboer, F, and Binder, E B
- Published
- 2011
- Full Text
- View/download PDF
4. Proteomic-based genotyping in a mouse model of trait anxiety exposes disease-relevant pathways
- Author
-
Ditzen, C, Varadarajulu, J, Czibere, L, Gonik, M, Targosz, B S, Hambsch, B, Bettecken, T, Keßler, M S, Frank, E, Bunck, M, Teplytska, L, Erhardt, A, Holsboer, F, Müller-Myhsok, B, Landgraf, R, and Turck, C W
- Published
- 2010
- Full Text
- View/download PDF
5. The GABA transporter 1 (SLC6A1): a novel candidate gene for anxiety disorders
- Author
-
Thoeringer, C. K., Ripke, S., Unschuld, P. G., Lucae, S., Ising, M., Bettecken, T., Uhr, M., Keck, M. E., Mueller-Myhsok, B., Holsboer, F., Binder, E. B., and Erhardt, A.
- Published
- 2009
- Full Text
- View/download PDF
6. IL2RA and IL7RA genes confer susceptibility for multiple sclerosis in two independent European populations
- Author
-
Weber, F, Fontaine, B, Cournu-Rebeix, I, Kroner, A, Knop, M, Lutz, S, Müller-Sarnowski, F, Uhr, M, Bettecken, T, Kohli, M, Ripke, S, Ising, M, Rieckmann, P, Brassat, D, Semana, G, Babron, M-C, Mrejen, S, Gout, C, Lyon-Caen, O, Yaouanq, J, Edan, G, Clanet, M, Holsboer, F, Clerget-Darpoux, F, and Müller-Myhsok, B
- Published
- 2008
- Full Text
- View/download PDF
7. Family-based association study of serotonergic candidate genes and attention-deficit/hyperactivity disorder in a German sample
- Author
-
Heiser, P., Dempfle, A., Friedel, S., Konrad, K., Hinney, A., Kiefl, H., Walitza, S., Bettecken, T., Saar, K., Linder, M., Warnke, A., Herpertz-Dahlmann, B., Schäfer, H., Remschmidt, H., and Hebebrand, J.
- Published
- 2007
- Full Text
- View/download PDF
8. Variants within the GABA transaminase (ABAT) gene region are associated with somatosensory evoked EEG potentials in families at high risk for affective disorders
- Author
-
Wegerer, M., Adena, S., Pfennig, A., Czamara, D., Sailer, U., Bettecken, T., Müller-Myhsok, B., Modell, S., and Ising, M.
- Published
- 2013
9. Single-nucleotide polymorphisms in HLA- and non-HLA genes associated with the development of antibodies to interferon-β therapy in multiple sclerosis patients
- Author
-
Weber, F, Cepok, S, Wolf, C, Berthele, A, Uhr, M, Bettecken, T h, Buck, D, Hartung, H P, Holsboer, F, Müller-Myhsok, B, and Hemmer, B
- Published
- 2012
- Full Text
- View/download PDF
10. More CLEC16A gene variants associated with multiple sclerosis
- Author
-
Nischwitz, S., Cepok, S., Kroner, A., Wolf, C., Knop, M., Müller-Sarnowski, F., Pfister, H., Rieckmann, P., Hemmer, B., Ising, M., Uhr, M., Bettecken, T., Holsboer, F., Müller-Myhsok, B., and Weber, F.
- Published
- 2011
- Full Text
- View/download PDF
11. Pharmacogenetics of antidepressant treatment outcome – Results from a genome-wide multilocus analysis including clinical predictors
- Author
-
Ising, M., Lucae, S., Binder, E. B., Bettecken, T., Uhr, M., Ripke, S., Kohli, M. A., Hennings, J., Horstmann, S., Kloiber, S., Menke, A., Bondy, B., Rupprecht, R., Domschke, K., Baune, B. T., Arolt, V., Rush, A. J., Holsboer, F., and Müller-Myhsok, B.
- Published
- 2009
- Full Text
- View/download PDF
12. Evidence for associations between PDE4D polymorphisms and a subtype of neuroticism
- Author
-
Heck, A, Lieb, R, Unschuld, P G, Ellgas, A, Pfister, H, Lucae, S, Erhardt, A, Himmerich, H, Horstmann, S, Kloiber, S, Ripke, S, Müller-Myhsok, B, Bettecken, T, Uhr, M, Holsboer, F, and Ising, M
- Published
- 2008
- Full Text
- View/download PDF
13. A 400-kb tandem duplication within the dystrophin gene leads to severe Becker muscular dystrophy
- Author
-
Gold, R., Kreß, W., Bettecken, T., Reichmann, H., and Müller, C. R.
- Published
- 1994
- Full Text
- View/download PDF
14. Tetrasomy 21pter→q21.2 in a male infant without typical Down’s syndrome dysmorphic features but moderate mental retardation
- Author
-
Rost, I, Fiegler, H, Fauth, C, Carr, P, Bettecken, T, Kraus, J, Meyer, C, Enders, A, Wirtz, A, Meitinger, T, Carter, N P, and Speicher, M R
- Published
- 2004
15. Reduced amplification efficiency of KIAA0027/MLC1 alleles: implications for the molecular diagnosis of megalencephalic leukoencephalopathy with subcortical cysts
- Author
-
Bettecken, T., Rubie, C., Lichtner, P., Siekiera, M., Meitinger, T., and Stöber, G.
- Published
- 2002
- Full Text
- View/download PDF
16. Genetik der Muskeldystrophien
- Author
-
Grimm, T., Apacik, C., Bettecken, T., Heindrichs, K., Kostrzewa, E., Meng, G., Müller, B., Kind, E., Wuschek, U., Müller, C. R., Fischer, Peter-Alexander, editor, Baas, Horst, editor, and Enzensberger, Wolfgang, editor
- Published
- 1989
- Full Text
- View/download PDF
17. MS susceptibility is not affected by single nucleotide polymorphisms in the MMP9 gene
- Author
-
Nischwitz, S., Wolf, C., Andlauer, T.F.M., Czamara, D., Zettl, U.K., Rieckmann, P., Buck, D., Ising, M., Bettecken, T., Mueller-Myhsok, B., and Weber, F.
- Published
- 2015
- Full Text
- View/download PDF
18. The association between lower educational attainment and depression owing to shared genetic effects? Results in ∼25 000 subjects: Results in ~25,000 subjects
- Author
-
Peyrot, W. J., Lee, S. H., Milaneschi, Y., Abdellaoui, A., Byrne, E. M., Esko, T., de Geus, E. J. C., Hemani, G., Hottenga, J. J., Kloiber, S., Levinson, D. F., Lucae, S., Martin, N. G., Medland, S. E., Metspalu, A., Milani, L., Noethen, M. M., Potash, J. B., Rietschel, M., Rietveld, C. A., Ripke, S., Shi, J., Willemsen, G., Zhu, Z., Boomsma, D. I., Wray, N. R., Penninx, B. W. J. H., Lewis, C. M., Hamilton, S. P., Weissman, M. M., Breen, G., Blackwood, D. H., Cichon, S., Heath, A. C., Holsboer, F., Madden, Pamela A., McGuffin, P., Muglia, P., Pergadia, M. L., Lin, D., Müller-Myhsok, B., Steinberg, S., Grabe, H. J., Lichtenstein, P., Magnusson, P., Perlis, R. H., Preisig, M., Smoller, J. W., Stefansson, K., Uher, R., Kutalik, Z., Tansey, K. E., Teumer, A., Viktorin, A., Barnes, M. R., Bettecken, T., Binder, E. B., Breuer, R., Castro, V. M., Churchill, S. E., Coryell, W. H., Craddock, N., Craig, I. W., Czamara, D., Degenhardt, F., Farmer, A. E., Fava, M., Frank, J., Gainer, V. S., Gallagher, P. J., Gordon, S. D., Goryachev, S., Gross, M., Guipponi, M., Henders, A. K., Herms, S., Hickie, I. B., Hoefels, S., Hoogendijk, W., Iosifescu, D. V., Ising, M., Jones, I., Jones, L., Jung-Ying, T., Knowles, J. A., Kohane, I. S., Kohli, M. A., Korszun, A., Landen, M., Lawson, W. B., Lewis, G., Macintyre, D., Maier, W., Mattheisen, M., McGrath, P. J., McIntosh, A., McLean, A., Middeldorp, C. M., Middleton, L., Montgomery, G. M., Murphy, S. N., Nauck, M., Nolen, W. A., Nyholt, Dale R., O'Donovan, M., Oskarsson, H., Pedersen, N., Scheftner, W. A., Schulz, A., Schulze, T. G., Shyn, S. I., Sigurdsson, E., Slager, S. L., Smit, J. H., Stefansson, H., Steffens, M., Thorgeirsson, T., Tozzi, F., Treutlein, J., Uhr, M., van den Oord, E. J., van Grootheest, G., Völzke, H., Weilburg, J. B., Zitman, F. G., Neale, B., Daly, M., Sullivan, P. F., Agrawal, Arpana, Albrecht, Eva, Z Alizadeh, Behrooz, Allik, J. ri, Amin, Najaf, Attia, John R., Bandinelli, Stefania, Barnard, John, Bastardot, Franois, e Baumeister, Sebastian, Beauchamp, Jonathan, Benjamin, Daniel J., Benke, Kelly S., Bennett, David A., Berger, Klaus, Bielak, Lawrence F., Bierut, Laura J., Boatman, Jeffrey A., Boyle, Patricia A., Bültmann, Ute, Campbell, Harry, Cesarini, David, Chabris, Christopher F., Cherkas, Lynn, Chung, Mina K., Conley, Dalton, Cucca, Francesco, Davey-Smith, George, Davies, Gail, de Andrade, Mariza, de Jager, Philip L., de Leeuw, Christiaan, de Neve, Jan-Emmanuel, Deary, Ian J., Dedoussis, George V., Deloukas, Panos, Derringer, Jaime, Dimitriou, Maria, Eiriksdottir, Gudny, Eklund, Niina, Elderson, Martin F., Eriksson, Johan G., Evans, Daniel S., Evans, David M., Faul, Jessica D., Fehrmann, Rudolf, Ferrucci, Luigi, Fischer, Krista, Franke, Lude, Garcia, Melissa E., Gieger, Christian, Gjessing, Hkon K., Groenen, Patrick J. F., Grönberg, Henrik, Gudnason, Vilmundur, Hägg, Sara, Hall, Per, Harris, Jennifer R., Harris, Juliette M., Harris, Tamara B., Hastie, Nicholas D., Hayward, Caroline, Hernandez, Dena G., Hoffmann, Wolgang, Hofman, Adriaan, Hofman, Albert, Holle, Rolf, Holliday, Elizabeth G., Holzapfel, Christina, Iacono, William G., Ibrahim-Verbaas, Carla A., Illig, Thomas, Ingelsson, Erik, Jacobsson, Bo, Järvelin, Marjo-Riitta, Jhun, Min A., Johannesson, Magnus, Joshi, Peter K., Jugessur, Astanand, Kaakinen, Marika, Kähönen, Mika, Kanoni, Stavroula, Kaprio, Jaakkko, Kardia, Sharon L. R., Karjalainen, Juha, Kirkpatrick, Robert M., Koellinger, Philipp D., Kolcic, Ivana, Kowgier, Matthew, Kristiansson, Kati, Krueger, Robert F., Kutalik, Z. ltan, Lahti, Jari, Laibson, David, Latvala, Antti, Launer, Lenore J., Lawlor, Debbie A., Lethimäki, Terho, Li, Jingmei, Lichtenstein, Paul, Lichtner, Peter K., Liewald, David C., Lin, Peng, Lind, Penelope A., Liu, Yongmei, Lohman, Kurt, Loitfelder, Marisa, Magnusson, Patrick K. E., Mäkinen, Tomi E., Vidal, Pedro Marques, Martin, Nicolas W., Masala, Marco, McGue, Matt, McMahon, George, Meirelles, Osorio, Meyer, Michelle N., Mielck, Andreas, Miller, Michael B., Montgomery, Grant W., Mukherjee, Sutapa, Myhre, Ronny, Nuotio, Marja-Liisa, J Oldmeadow, Christopher, Oostra, Ben A., Palmer, Lyle J., Palotie, Aarno, Perola, Markus, Petrovic, Katja E., Peyser, Patricia A., Polašek, Ozren, Posthuma, Danielle, Preisig, Martin, Quaye, Lydia, Räikkönen, Katri, Raitakari, Olli T., Realo, Anu, Reinmaa, Eva, Rice, John P., Ring, Susan M., Ripatti, Samuli, Rivadeneira, Fernando, Rizzi, Thais S., Rudan, Igor, Rustichini, Aldo, Salomaa, Veikko, Sarin, Antti-Pekka, Schlessinger, David, Schmidt, Helena, Schmidt, Reinhold, Scott, Rodney J., Shakhbazov, Konstantin, Smith, Albert V., Smith, Jennifer A., Snieder, Harold, St Pourcain, Beate, Starr, John M., Sul, Jae Hoon, Surakka, Ida, Svento, Rauli, Tanaka, Toshiko, Terracciano, Antonio, Teumer, Alexander, Thurik, A. Roy, Tiemeier, Henning, Timpson, Nicholas J., Uitterlinden, André G., van der Loos, Matthijs J. H. M., van Duijn, Cornelia M., van Rooij, Frank J. A., van Wagoner, David R., Vartiainen, Erkki, Viikari, Jorma, Visscher, Peter M., Vitart, Veronique, Vollenweider, Peter K., Völzke, Henry, Vonk, Judith M., Waeber, G. rard, Weir, David R., Wellmann, J. rgen, Westra, Harm-Jan, Wichmann, H. Erich, Widen, Elisabeth, Wilson, James F., Wright, Alan F., Yang, Jian, Yu, Lei, Zhao, Wei, and Academic Medical Center
- Subjects
Adult ,Male ,Psychiatric Status Rating Scales ,Likelihood Functions ,Genotype ,Estonia/epidemiology ,Netherlands/epidemiology ,Depressive Disorder, Major/epidemiology ,Middle Aged ,Polymorphism, Single Nucleotide/genetics ,Cohort Studies ,Odds Ratio ,Educational Status ,Humans ,Regression Analysis ,Female ,Gene-Environment Interaction ,Genetic Association Studies ,Aged - Abstract
An association between lower educational attainment (EA) and an increased risk for depression has been confirmed in various western countries. This study examines whether pleiotropic genetic effects contribute to this association. Therefore, data were analyzed from a total of 9662 major depressive disorder (MDD) cases and 14 949 controls (with no lifetime MDD diagnosis) from the Psychiatric Genomics Consortium with additional Dutch and Estonian data. The association of EA and MDD was assessed with logistic regression in 15 138 individuals indicating a significantly negative association in our sample with an odds ratio for MDD 0.78 (0.75-0.82) per standard deviation increase in EA. With data of 884 105 autosomal common single-nucleotide polymorphisms (SNPs), three methods were applied to test for pleiotropy between MDD and EA: (i) genetic profile risk scores (GPRS) derived from training data for EA (independent meta-analysis on ∼120 000 subjects) and MDD (using a 10-fold leave-one-out procedure in the current sample), (ii) bivariate genomic-relationship-matrix restricted maximum likelihood (GREML) and (iii) SNP effect concordance analysis (SECA). With these methods, we found (i) that the EA-GPRS did not predict MDD status, and MDD-GPRS did not predict EA, (ii) a weak negative genetic correlation with bivariate GREML analyses, but this correlation was not consistently significant, (iii) no evidence for concordance of MDD and EA SNP effects with SECA analysis. To conclude, our study confirms an association of lower EA and MDD risk, but this association was not because of measurable pleiotropic genetic effects, which suggests that environmental factors could be involved, for example, socioeconomic status.
- Published
- 2015
19. Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways
- Author
-
O’dushlaine, C, Rossin, L, Lee, PH, Duncan, L, Parikshak, NN, Newhouse, S, Ripke, S, Neale, BM, Purcell, SM, Posthuma, D, Nurnberger, JI, Lee, SH, Faraone, SV, Perlis, RH, Mowry, BJ, Thapar, A, Goddard, ME, Witte, JS, Absher, D, Agartz, I, Akil, H, Amin, F, Andreassen, OA, Anjorin, A, Anney, R, Anttila, V, Arking, DE, Asherson, P, Azevedo, MH, Backlund, L, Badner, JA, Bailey, AJ, Banaschewski, T, Barchas, JD, Barnes, MR, Barrett, TB, Bass, N, Battaglia, A, Bauer, M, Bayés, M, Bellivier, F, Bergen, SE, Berrettini, W, Betancur, C, Bettecken, T, Biederman, J, Binder, EB, Black, DW, Blackwood, DHR, Bloss, CS, Boehnke, M, Boomsma, DI, Breuer, R, Bruggeman, R, Cormican, P, Buccola, NG, Buitelaar, JK, Bunney, WE, Buxbaum, JD, Byerley, WF, Byrne, EM, Caesar, S, Cahn, W, Cantor, RM, Casas, M, Chakravarti, A, Chambert, K, Choudhury, K, and Cichon, S
- Abstract
© 2015 Nature America, Inc. All rights reserved. Genome-wide association studies (GWAS) of psychiatric disorders have identified multiple genetic associations with such disorders, but better methods are needed to derive the underlying biological mechanisms that these signals indicate. We sought to identify biological pathways in GWAS data from over 60,000 participants from the Psychiatric Genomics Consortium. We developed an analysis framework to rank pathways that requires only summary statistics. We combined this score across disorders to find common pathways across three adult psychiatric disorders: schizophrenia, major depression and bipolar disorder. Histone methylation processes showed the strongest association, and we also found statistically significant evidence for associations with multiple immune and neuronal signaling pathways and with the postsynaptic density. Our study indicates that risk variants for psychiatric disorders aggregate in particular biological pathways and that these pathways are frequently shared between disorders. Our results confirm known mechanisms and suggest several novel insights into the etiology of psychiatric disorders.
- Published
- 2015
- Full Text
- View/download PDF
20. Exome Array GWAS in 10,000 Germans Identifies Association between MUC22 and Multiple Sclerosis
- Author
-
Dankowski, T., Buck, D., Andlauer, T. F., Antony, G., Bayas, A., Bechmann, Lars Peter, Berthele, A., Bettecken, T., Chan, A., Franke, A., Gold, R., Graetz, C., Haas, J., Hecker, M., Herms, S., Hohlfeld, R., Infante-Duarte, C., Jöckel, Karl-Heinz, Kieseier, B. C., Knier, B., Knop, M., Lichtner, P., Lieb, W., Lill, C. M., Limmroth, V., Linker, R. A., Loleit, V., Meuth, S., Moebus, Susanne, Mueller-Myhsok, B., Nischwitz, S., Noethen, M. M., Friedemann, P., Pütz, Martin, Ruck, T., Salmen, A., Stangel, M., Stellmann, J. -. P., Strauch, K., Stuerner, K. H., Tackenberg, B., Bergh, F. T. h. e. n., Tumani, H., Waldenberger, M., Weber, F., Wiend, H., Wildemann, B., Zettl, U. K., Ziemann, U., Zipp, F., Hemmer, B., and Ziegler, A.
- Subjects
Medizin - Published
- 2015
21. Multiplexing of primer extension products for mass spectrometry
- Author
-
Wjst, M., Herbon, N., Bettecken, T., and Immervoll, T.
- Subjects
Human genetics -- Research ,Mass spectrometry -- Usage ,DNA sequencers -- Research ,Biological sciences - Published
- 2001
22. Psychiatric genome-wide association study analyses implicate neuronal, immune and histone pathways.
- Author
-
O'Dushlaine, C., Rossin, L., Lee, P.H., Duncan, L., Parikshak, N.N., Newhouse, S., Ripke, S., Neale, B.M., Purcell, S., Posthuma, D., Nurnberger, J.I., Lee, S.H., Faraone, S.V., Perlis, R.H., Mowry, B.J., Thapar, A., Goddard, M.E., Witte, J.S., Absher, D., Agartz, I., Akil, H., Amin, F., Andreassen, O.A., Anjorin, A., Anney, R., Anttila, V., Arking, D.E., Asherson, P., Azevedo, M.H., Backlund, L., Badner, J.A., Bailey, A.J., Banaschewski, T., Barchas, J.D., Barnes, M.R., Barrett, T.B., Bass, N., Battaglia, A., Bauer, M., Bayes, M., Bellivier, F., Bergen, S.E., Berrettini, W., Betancur, C., Bettecken, T., Biederman, J., Binder, E.B., Black, D.W., Blackwood, D.H., Bloss, C.S., Boehnke, M., Boomsma, D.I., Breuer, R., Bruggeman, R., Cormican, P., Buccola, N.G., Buitelaar, J.K., Bunney, W.E., Buxbaum, J.D., Byerley, W.F., Byrne, E.M., Caesar, S., Cahn, W., Cantor, R.M., Casas, M., Chakravarti, A., Chambert, K., Choudhury, K., Cichon, S., Mattheisen, M., Cloninger, C.R., Collier, D.A., Cook, E.H., Coon, H., Cormand, B., Corvin, A., Coryell, W.H., Craig, D.W., Craig, I., Crosbie, J., Cuccaro, M.L., Curtis, D., Czamara, D., Datta, S., Dawson, G., Day, R., Geus, E.J. de, Degenhardt, F., Djurovic, S., Donohoe, G., Doyle, A., Duan, J., Dudbridge, F., Duketis, E., Ebstein, R.P., Edenberg, H.J., Elia, J., Ennis, S., Etain, B., Fanous, A., Farmer, A., Ferrier, I.N., Flickinger, M., Foroud, T.M., Frank, J., Franke, B., Fraser, C., Freedman, R., Freimer, N.B., Freitag, C.M., Friedl, M., Frisen, L., Gallagher, L., Gejman, P.V., Georgieva, L., Gershon, E.S., Giegling, I., Gill, M., Gordon, S., Gordon-Smith, K., Green, E.K., Greenwood, T.A., Grice, D.E., Gross, M., Grozeva, D., Guan, W., Gurling, H., Haan, L. de, Haines, J.L., Hakonarson, H., Hallmayer, J., Hamilton, S.P., Hamshere, M., Hansen, T., Hartmann, A.M., Hauutzinger, M., Heath, A.C., Henders, A.K., Herms, S., Hickie, I., et al., O'Dushlaine, C., Rossin, L., Lee, P.H., Duncan, L., Parikshak, N.N., Newhouse, S., Ripke, S., Neale, B.M., Purcell, S., Posthuma, D., Nurnberger, J.I., Lee, S.H., Faraone, S.V., Perlis, R.H., Mowry, B.J., Thapar, A., Goddard, M.E., Witte, J.S., Absher, D., Agartz, I., Akil, H., Amin, F., Andreassen, O.A., Anjorin, A., Anney, R., Anttila, V., Arking, D.E., Asherson, P., Azevedo, M.H., Backlund, L., Badner, J.A., Bailey, A.J., Banaschewski, T., Barchas, J.D., Barnes, M.R., Barrett, T.B., Bass, N., Battaglia, A., Bauer, M., Bayes, M., Bellivier, F., Bergen, S.E., Berrettini, W., Betancur, C., Bettecken, T., Biederman, J., Binder, E.B., Black, D.W., Blackwood, D.H., Bloss, C.S., Boehnke, M., Boomsma, D.I., Breuer, R., Bruggeman, R., Cormican, P., Buccola, N.G., Buitelaar, J.K., Bunney, W.E., Buxbaum, J.D., Byerley, W.F., Byrne, E.M., Caesar, S., Cahn, W., Cantor, R.M., Casas, M., Chakravarti, A., Chambert, K., Choudhury, K., Cichon, S., Mattheisen, M., Cloninger, C.R., Collier, D.A., Cook, E.H., Coon, H., Cormand, B., Corvin, A., Coryell, W.H., Craig, D.W., Craig, I., Crosbie, J., Cuccaro, M.L., Curtis, D., Czamara, D., Datta, S., Dawson, G., Day, R., Geus, E.J. de, Degenhardt, F., Djurovic, S., Donohoe, G., Doyle, A., Duan, J., Dudbridge, F., Duketis, E., Ebstein, R.P., Edenberg, H.J., Elia, J., Ennis, S., Etain, B., Fanous, A., Farmer, A., Ferrier, I.N., Flickinger, M., Foroud, T.M., Frank, J., Franke, B., Fraser, C., Freedman, R., Freimer, N.B., Freitag, C.M., Friedl, M., Frisen, L., Gallagher, L., Gejman, P.V., Georgieva, L., Gershon, E.S., Giegling, I., Gill, M., Gordon, S., Gordon-Smith, K., Green, E.K., Greenwood, T.A., Grice, D.E., Gross, M., Grozeva, D., Guan, W., Gurling, H., Haan, L. de, Haines, J.L., Hakonarson, H., Hallmayer, J., Hamilton, S.P., Hamshere, M., Hansen, T., Hartmann, A.M., Hauutzinger, M., Heath, A.C., Henders, A.K., Herms, S., Hickie, I., and et al.
- Abstract
Contains fulltext : 153763pre.pdf (preprint version ) (Open Access)
- Published
- 2015
23. Identification of risk loci with shared effects on five major psychiatric disorders:a genome-wide analysis
- Author
-
Smoller, J.W., Ripke, S., Lee, P.H., Neale, B., Nurnberger, J.I., Santangelo, S., Sullivan, P.F., Perlis, R.H., Purcell, S.M., Fanous, A., Neale, M.C., Rietschel, M., Schulze, T.G., Thapar, A., Anney, R., Buitelaar, J.K., Farone, S.V., Hoogendijk, W.J.G., Levinson, D.F., Lesch, K.P., Riley, B., Schachar, R., Sonuga-Barke, E.J., Absher, D., Agartz, I., Akil, H., Amin, F., Andreassen, O.A., Anjorin, A., Arking, D., Asherson, P., Azevedo, M.H., Backlund, L., Badner, J.A., Banaschewski, T., Barchas, J.D., Barnes, M.R., Bass, N., Bauer, M.C.R., Bellivier, F., Bergen, S.E., Berrettini, W., Bettecken, T., Biederman, J, Binder, E.B., Black, D.W., Blackwood, D.H., Bloss, C.S., Boehnke, M., Boomsma, D.I., Breen, G., Breuer, R., Buccola, N.G., Bunner, W.E., Burmeister, M., Buxbaum, J.D., Byerley, W. F., Sian, C., Cantor, R.M., Chakravarti, A., Chambert, K., Chicon, S., Cloniger, C.R., Collier, D.A., Cook, E., Coon, H., Corvin, A., Coryell, W.H., Craig, D.W., Craig, I.W., Curtis, D., Czamara, D., Daly, M., Datta, S., Day, R., de Geus, E.J.C., Degenhardt, F., Devlin, B., Srdjan, D., Doyle, A.E., Duan, J., Dudbridge, F., Edenberg, H.J., Elkin, A., Etain, B., Farmer, A.E., Ferreira, M.A.R., Ferrier, I.N., Flickinger, M., Foroud, T., Frank, J., Franke, B., Fraser, C., Freedman, R., Freimer, N.B., Friedl, M., Frisén, L., Gejman, P.V., Georgieva, L., Gershon, E.S., Giegling, I., Gill, M., Gordon, S.D., Gordon-Smith, K., Green, E.K., Greenwood, T.A., Gross, M., Grozeva, D., Guan, W., Gurling, H., Gustafsson, O., Hakonarson, H., Hamilton, S.P., Hamshere, M.L., Hansen, T.F., Hartmann, A.M., Hautzinger, M., Heath, A.C., Henders, A.K., Herms, S., Hickie, I.B., Hipolito, M., Hoefels, S., Holmans, P.A., Holsboer, F., Hottenga, J.J., Hultman, C. M., Ingason, A., Ising, M., Jamain, S., Jones, E.G., Jones, L., Jones, I., Jung-Ying, T., Kahler, A., Kandaswamy, R., Keller, M.C., Kelsoe, J., Kennedy, J.L., Kenny, E., Kim, Y., Kirov, G. K., Knowles, J.A., Kohli, M.A., Koller, D.L., Konte, B., Korszun, A., Krasucki, R., Kuntsi, J., Phoenix, K., Landén, M., Langstrom, N., Lathrop, M., Lawrence, J., Lawson, W.B., Leboyer, M., Lencz, T., Lewis, C.M., Li, J., Lichtenstein, P., Lieberman, J. A., Lin, D., Liu, C., Lohoff, F.W., Loo, S.K., Lucae, S., MacIntyre, D.J., Madden, P.A.F., Magnusson, P., Mahon, P.B., Maier, W., Malhotra, A.K., Mattheisen, M., Matthews, K., Mattingsdal, M., McCarroll, S., McGhee, K.A., McGough, J.J., McGrath, P.J., McGuffin, P., McInnis, M.G., McIntosh, A., McKinney, R., McClean, A.W., McMahon, F.J., McQuillin, A., Medeiros, H., Medland, S.E., Meier, S., Melle, I., Meng, F., Middeldorp, C.M., Middleton, L., Vihra, M., Mitchell, P.B., Montgomery, G.W., Moran, J., Morken, G., Morris, D.W., Moskvina, V., Mowry, B. J., Muglia, P., Mühleisen, T.W., Muir, W.J., Müller-Myhsok, B., Myers, R.M., Nelson, S.F., Nievergelt, C.M., Nikolovq, I., Nimgaonkar, V.L., Nolen, W.A., Nöthen, M.M., Nwulia, E.A., Nyholt, DR, O'Donovan, M.C., O'Dushlaine, C., Oades, R.D., Olincy, A., Olsen, L., Ophoff, R.A., Osby, U., Óskarsson, H., Owen, M.J., Palotie, A., Pato, M.T., Pato, C.N., Penninx, B.W.J.H., Pergadia, M.L., Petursson, H., Pickard, B.S., Pimm, J., Piven, J., Porgeirsson, P., Posthuma, D., Potash, J.B., Propping, J., Puri, V., Quested, D., Quinn, E.M., Rasmussen, H.B., Raychaudhuri, S., Rehnström, K., Reif, A., Rice, J., Rossin, L., Rothenberger, A., Rouleau, G., Ruderfer, D., Rujescu, D., Sanders, A.R., Schalling, M., Schatzberg, A.F., Scheftner, W.A., Schellenberg, G.D., Schofield, P.R., Schork, N.J., Schumacher, J., Schwarz, M.M., Scolnick, E., Scott, L.J., Shi, J., Shillling, P.D., Shyn, S.I., Sigurdsson, E., Silverman, J.M., Sklar, P., Slager, S.L., Smalley, S.L., Smit, J.H., Smith, E.N., Sonuga-Barke, E., St Clair, D., State, M., Stefansson, K., Stefansson, H., Steffans, M., Steinberg, S., Steinhausen, H.C., Strauss, J., Strohmaier, J., Stroup, T.S., Sutcliffe, J., Szatmari, P., Szelinger, S., Thirumalai, S., Thompson, R.C., Tozzi, F., Treutlein, J., Uhr, M., van den Oord, E.J., Grootheest, G., Vieland, V., Vincent, J.B., Visscher, P.M., Watson, S.J., Weissman, M.M., Werge, T., Wienker, T.F., Willemsen, G., Williamson, R., Witt, S.H., Wray, N.R., Wright, A., Xu, W., Young, A.H., Zammit, S., Zandi, P.P., Zhang, P., Zitman, F.G., Zöllner, S., Kendler, K.S., Psychiatry, Human genetics, Epidemiology and Data Science, NCA - Brain mechanisms in health and disease, NCA - Neurobiology of mental health, EMGO - Mental health, NCA - Brain imaging technology, Biological Psychology, Functional Genomics, Neuroscience Campus Amsterdam - Brain Mechanisms in Health & Disease, Neuroscience Campus Amsterdam - Neurobiology of Mental Health, EMGO+ - Mental Health, Neuroscience Campus Amsterdam - Brain Imaging Technology, Psychiatrie & Neuropsychologie, Farmacologie en Toxicologie, RS: CARIM School for Cardiovascular Diseases, RS: MHeNs School for Mental Health and Neuroscience, Oades, Robert D. (Beitragende*r), and Oades, Robert D.
- Subjects
Netherlands Twin Register (NTR) ,Adult ,medicine.medical_specialty ,Bipolar Disorder ,Calcium Channels, L-Type ,Population ,Medizin ,Genome-wide association study ,Biology ,Polymorphism, Single Nucleotide ,Article ,Genomic disorders and inherited multi-system disorders DCN MP - Plasticity and memory [IGMD 3] ,medicine ,ddc:61 ,Attention deficit hyperactivity disorder ,Humans ,DCN PAC - Perception action and control NCEBP 9 - Mental health ,ddc:610 ,Medizinische Fakultät » Universitätsklinikum Essen » LVR-Klinikum Essen » Klinik für Psychiatrie, Psychosomatik und Psychotherapie des Kindes- und Jugendalters ,Bipolar disorder ,Age of Onset ,Psychiatry ,education ,Child ,Genetics ,education.field_of_study ,Depressive Disorder, Major ,General Medicine ,Genomic disorders and inherited multi-system disorders [DCN PAC - Perception action and control IGMD 3] ,medicine.disease ,Logistic Models ,Autism spectrum disorder ,Schizophrenia ,Attention Deficit Disorder with Hyperactivity ,Child Development Disorders, Pervasive ,Genetic Loci ,Expression quantitative trait loci ,Major depressive disorder ,Genome-Wide Association Study - Abstract
Item does not contain fulltext BACKGROUND: Findings from family and twin studies suggest that genetic contributions to psychiatric disorders do not in all cases map to present diagnostic categories. We aimed to identify specific variants underlying genetic effects shared between the five disorders in the Psychiatric Genomics Consortium: autism spectrum disorder, attention deficit-hyperactivity disorder, bipolar disorder, major depressive disorder, and schizophrenia. METHODS: We analysed genome-wide single-nucleotide polymorphism (SNP) data for the five disorders in 33,332 cases and 27,888 controls of European ancestory. To characterise allelic effects on each disorder, we applied a multinomial logistic regression procedure with model selection to identify the best-fitting model of relations between genotype and phenotype. We examined cross-disorder effects of genome-wide significant loci previously identified for bipolar disorder and schizophrenia, and used polygenic risk-score analysis to examine such effects from a broader set of common variants. We undertook pathway analyses to establish the biological associations underlying genetic overlap for the five disorders. We used enrichment analysis of expression quantitative trait loci (eQTL) data to assess whether SNPs with cross-disorder association were enriched for regulatory SNPs in post-mortem brain-tissue samples. FINDINGS: SNPs at four loci surpassed the cutoff for genome-wide significance (p
- Published
- 2013
- Full Text
- View/download PDF
24. A mega-analysis of genome-wide association studies for major depressive disorder
- Author
-
Ripke, S, Wray, NR, Lewis, CM, Hamilton, SP, Weissman, MM, Breen, G, Byrne, EM, Blackwood, DHR, Boomsma, DI, Cichon, S, Heath, AC, Holsboer, F, Lucae, S, Madden, PA, Martin, NG, McGuffin, P, Muglia, P, Noethen, MM, Penninx, BP, Pergadia, ML, Potash, JB, Rietschel, M, Lin, DY, Muller-Myhsok, B, Shi, J, Steinberg, S, Grabe, HJ, Lichtenstein, P, Magnusson, P, Perlis, RH, Preisig, M, Smoller, JW, Stefansson, K, Uher, R, Kutalik, Z, Tansey, KE, Teumer, A, Viktorin, A, Barnes, MR, Bettecken, T, Binder, EB, Breuer, R, Castro, VM, Churchill, SE, Coryell, WH, Craddock, N, Craig, IW, Czamara, D, de Geus, EJC, Degenhardt, F, Farmer, AE, Fava, M, Frank, J, Gainer, VS, Gallagher, PJ, Gordon, SD, Goryachev, S, Gross, M, Guipponi, M, Henders, AK, Herms, S, Hickie, IB, Hoefels, S, Hoogendijk, Witte, Hottenga, JJ (Jouke Jan), Iosifescu, DV, Ising, M, Jones, I, Jones, L, Jung-Ying, T, Knowles, JA, Kohane, IS, Kohli, MA, Korszun, A, Landen, M, Lawson, WB, Lewis, G, MacIntyre, DJ, Maier, W, Mattheisen, M, McGrath, PJ, McIntosh, A, McLean, AW, Middeldorp, CM (Christel), Middleton, L, Montgomery, GM, Murphy, SN, Nauck, M, Nolen, WA, Nyholt, DR, O' Donovan, M, Oskarsson, H, Pedersen, N, Scheftner, WA, Schulz, TG, Shyn, SI, Sigurdsson, E, Slager, SL, Smit, JH, Stefansson, H, Steffens, M, Thorgeirsson, T, Tozzi, F, Treutlein, J, Uhr, M, van den Oord, EJCG (Edwin), Van Grootheest, G, Volzke, H, Weilburg, JB, Willemsen, G, Zitman, FG, Neale, BM, Daly, M, Levinson, DF, Sullivan, PF, Psychiatry, Epidemiology, and Child and Adolescent Psychiatry / Psychology
- Published
- 2013
25. Genotyping of Fanconi Anemia Patients by Whole Exome Sequencing: Advantages and Challenges
- Author
-
Knies, K., Schuster, B., Ameziane, N., Rooimans, M., Bettecken, T., de Winter, J.P., Schindler, D, Human genetics, and CCA - Oncogenesis
- Subjects
Male ,Genotype ,Gene Identification and Analysis ,Medizin ,lcsh:Medicine ,Molecular Genetics ,Autosomal Recessive ,Genome Analysis Tools ,Genetics ,Humans ,Exome ,ddc:610 ,lcsh:Science ,Biology ,Clinical Genetics ,Base Sequence ,Fanconi Anemia Complementation Group D2 Protein ,lcsh:R ,Cell Cycle ,Computational Biology ,High-Throughput Nucleotide Sequencing ,Reproducibility of Results ,Human Genetics ,Anemia ,Genomics ,Hematology ,Bone Marrow Failure ,Pedigree ,Fanconi Anemia ,Mutation ,Medicine ,lcsh:Q ,Female ,Sequence Analysis ,Research Article - Abstract
Fanconi anemia (FA) is a rare genomic instability syndrome. Disease-causing are biallelic mutations in any one of at least 15 genes encoding members of the FA/BRCA pathway of DNA-interstrand crosslink repair. Patients are diagnosed based upon phenotypical manifestations and the diagnosis of FA is confirmed by the hypersensitivity of cells to DNA interstrand crosslinking agents. Customary molecular diagnostics has become increasingly cumbersome, time-consuming and expensive the more FA genes have been identified. We performed Whole Exome Sequencing (WES) in four FA patients in order to investigate the potential of this method for FA genotyping. In search of an optimal WES methodology we explored different enrichment and sequencing techniques. In each case we were able to identify the pathogenic mutations so that WES provided both, complementation group assignment and mutation detection in a single approach. The mutations included homozygous and heterozygous single base pair substitutions and a two-base-pair duplication in FANCJ, -D1, or -D2. Different WES strategies had no critical influence on the individual outcome. However, database errors and in particular pseudogenes impose obstacles that may prevent correct data perception and interpretation, and thus cause pitfalls. With these difficulties in mind, our results show that WES is a valuable tool for the molecular diagnosis of FA and a sufficiently safe technique, capable of engaging increasingly in competition with classical genetic approaches.
- Published
- 2012
- Full Text
- View/download PDF
26. More CLEC16A gene variants associated with multiple sclerosis
- Author
-
Nischwitz, S., Cepok, S., Kroner, A., Wolf, C., Knop, M., Müller-Sarnowski, Felix, Pfister, H., Rieckmann, P., Hemmer, B., Ising, M., Uhr, M., Bettecken, T., Holsboer, F., Müller-Myhsok, B., and Weber, F.
- Published
- 2010
27. Genome-wide meta-analysis of myopia and hyperopia provides evidence for replication of 11 loci
- Author
-
Simpson, C.L. (Claire), Wojciechowski, R. (Robert), Oexle, K. (Konrad), Murgia, D. (Daniela), Portas, L. (Laura), Li, X. (Xiaohui), Virginie, J.M.V. (J.M. Verhoeven), Vitart, V. (Veronique), Schache, M. (Maria), Mohsen Hosseini, S., Hysi, P.G. (Pirro), Raffel, L.J. (Leslie), Cotch, M.F. (Mary Frances), Chew, E.Y. (Emily), Klein, B.E.K. (Barbara), Klein, R. (Ronald), Wong, T.Y. (Tien Yin), Duijn, C.M. (Cornelia) van, Mitchell, P. (Paul), Saw, S-M. (Seang-Mei), Fossarello, M. (Maurizio), Wang, J.J. (Jie Jin), Polasek, O. (Ozren), Campbell, H. (Harry), Rudan, I. (Igor), Oostra, B.A. (Ben), Uitterlinden, A.G. (André), Hofman, A. (Albert), Rivadeneira Ramirez, F. (Fernando), Amin, N. (Najaf), Karssen, L.C. (Lennart), Vingerling, J.R. (Hans), Döring, A. (Angela), Bettecken, T. (Thomas), Bencic, G. (Goran), Gieger, C. (Christian), Wichmann, H.E. (Heinz Erich), Wilson, J.F. (James F), Venturini, C. (Cristina), Fleck, B. (Brian), Cumberland, P. (Phillippa), Rahi, J.S. (Jugnoo), Hammond, C.J. (Christopher), Hayward, C. (Caroline), Wright, A. (Alan), Paterson, A.D. (Andrew), Baird, P.N. (Paul), Klaver, C.C.W. (Caroline), Rotter, J.I. (Jerome I.), Pirastu, M. (Mario), Meitinger, T. (Thomas), Bailey-Wilson, J.E. (Joan E.), Stambolian, D.E. (Dwight), Simpson, C.L. (Claire), Wojciechowski, R. (Robert), Oexle, K. (Konrad), Murgia, D. (Daniela), Portas, L. (Laura), Li, X. (Xiaohui), Virginie, J.M.V. (J.M. Verhoeven), Vitart, V. (Veronique), Schache, M. (Maria), Mohsen Hosseini, S., Hysi, P.G. (Pirro), Raffel, L.J. (Leslie), Cotch, M.F. (Mary Frances), Chew, E.Y. (Emily), Klein, B.E.K. (Barbara), Klein, R. (Ronald), Wong, T.Y. (Tien Yin), Duijn, C.M. (Cornelia) van, Mitchell, P. (Paul), Saw, S-M. (Seang-Mei), Fossarello, M. (Maurizio), Wang, J.J. (Jie Jin), Polasek, O. (Ozren), Campbell, H. (Harry), Rudan, I. (Igor), Oostra, B.A. (Ben), Uitterlinden, A.G. (André), Hofman, A. (Albert), Rivadeneira Ramirez, F. (Fernando), Amin, N. (Najaf), Karssen, L.C. (Lennart), Vingerling, J.R. (Hans), Döring, A. (Angela), Bettecken, T. (Thomas), Bencic, G. (Goran), Gieger, C. (Christian), Wichmann, H.E. (Heinz Erich), Wilson, J.F. (James F), Venturini, C. (Cristina), Fleck, B. (Brian), Cumberland, P. (Phillippa), Rahi, J.S. (Jugnoo), Hammond, C.J. (Christopher), Hayward, C. (Caroline), Wright, A. (Alan), Paterson, A.D. (Andrew), Baird, P.N. (Paul), Klaver, C.C.W. (Caroline), Rotter, J.I. (Jerome I.), Pirastu, M. (Mario), Meitinger, T. (Thomas), Bailey-Wilson, J.E. (Joan E.), and Stambolian, D.E. (Dwight)
- Abstract
Refractive error (RE) is a complex, multifactorial disorder characterized by a mismatch between the optical power of the eye and its axial length that causes object images to be focused off the retina. The two major subtypes of RE are myopia (nearsightedness) and hyperopia (farsightedness), which represent opposite ends of the distribution of the quantitative measure of spherical refraction. We performed a fixed effects meta-analysis of genome-wide association results of myopia and hyperopia from 9 studies of European-derived populations: AREDS, KORA, FES, OGP-Talana, MESA, RSI, RSII, RSIII and ERF. One genome-wide significant region was observed for myopia, corresponding to a previously identified myopia locus on 8q12 (p = 1.25610-8), which has been reported by Kiefer et al. as significantly associated with myopia age at onset and Verhoeven et al. as significantly associated to mean spherical-equivalent (MSE) refractive error. We observed two genomewide significant associations
- Published
- 2014
- Full Text
- View/download PDF
28. Genome-Wide Meta-Analysis of Myopia and Hyperopia Provides Evidence for Replication of 11 Loci
- Author
-
Miao, X, Simpson, CL, Wojciechowski, R, Oexle, K, Murgia, F, Portas, L, Li, X, Verhoeven, VJM, Vitart, V, Schache, M, Hosseini, SM, Hysi, PG, Raffel, LJ, Cotch, MF, Chew, E, Klein, BEK, Klein, R, Wong, TY, Van Duijn, CM, Mitchell, P, Saw, SM, Fossarello, M, Wang, JJ, Polasek, O, Campbell, H, Rudan, I, Oostra, BA, Uitterlinden, AG, Hofman, A, Rivadeneira, F, Amin, N, Karssen, LC, Vingerling, JR, Doering, A, Bettecken, T, Bencic, G, Gieger, C, Wichmann, H-E, Wilson, JF, Venturini, C, Fleck, B, Cumberland, PM, Rahi, JS, Hammond, CJ, Hayward, C, Wright, AF, Paterson, AD, Baird, PN, Klaver, CCW, Rotter, JI, Pirastu, M, Meitinger, T, Bailey-Wilson, JE, Stambolian, D, Miao, X, Simpson, CL, Wojciechowski, R, Oexle, K, Murgia, F, Portas, L, Li, X, Verhoeven, VJM, Vitart, V, Schache, M, Hosseini, SM, Hysi, PG, Raffel, LJ, Cotch, MF, Chew, E, Klein, BEK, Klein, R, Wong, TY, Van Duijn, CM, Mitchell, P, Saw, SM, Fossarello, M, Wang, JJ, Polasek, O, Campbell, H, Rudan, I, Oostra, BA, Uitterlinden, AG, Hofman, A, Rivadeneira, F, Amin, N, Karssen, LC, Vingerling, JR, Doering, A, Bettecken, T, Bencic, G, Gieger, C, Wichmann, H-E, Wilson, JF, Venturini, C, Fleck, B, Cumberland, PM, Rahi, JS, Hammond, CJ, Hayward, C, Wright, AF, Paterson, AD, Baird, PN, Klaver, CCW, Rotter, JI, Pirastu, M, Meitinger, T, Bailey-Wilson, JE, and Stambolian, D
- Abstract
Refractive error (RE) is a complex, multifactorial disorder characterized by a mismatch between the optical power of the eye and its axial length that causes object images to be focused off the retina. The two major subtypes of RE are myopia (nearsightedness) and hyperopia (farsightedness), which represent opposite ends of the distribution of the quantitative measure of spherical refraction. We performed a fixed effects meta-analysis of genome-wide association results of myopia and hyperopia from 9 studies of European-derived populations: AREDS, KORA, FES, OGP-Talana, MESA, RSI, RSII, RSIII and ERF. One genome-wide significant region was observed for myopia, corresponding to a previously identified myopia locus on 8q12 (p = 1.25×10(-8)), which has been reported by Kiefer et al. as significantly associated with myopia age at onset and Verhoeven et al. as significantly associated to mean spherical-equivalent (MSE) refractive error. We observed two genome-wide significant associations with hyperopia. These regions overlapped with loci on 15q14 (minimum p value = 9.11×10(-11)) and 8q12 (minimum p value 1.82×10(-11)) previously reported for MSE and myopia age at onset. We also used an intermarker linkage- disequilibrium-based method for calculating the effective number of tests in targeted regional replication analyses. We analyzed myopia (which represents the closest phenotype in our data to the one used by Kiefer et al.) and showed replication of 10 additional loci associated with myopia previously reported by Kiefer et al. This is the first replication of these loci using myopia as the trait under analysis. "Replication-level" association was also seen between hyperopia and 12 of Kiefer et al.'s published loci. For the loci that show evidence of association to both myopia and hyperopia, the estimated effect of the risk alleles were in opposite directions for the two traits. This suggests that these loci are important contributors to variation of refractive error acros
- Published
- 2014
29. Genome-Wide Meta-Analysis of Myopia and Hyperopia Provides Evidence for Replication of 11 Loci
- Author
-
Simpson, CL, Wojciechowski, R, Oexle, K, Murgia, F, Portas, L, Li, XH, Verhoeven, Virginie, Vitart, V, Schache, M, Hosseini, SM, Hysi, PG, Raffel, LJ, Cotch, MF, Chew, E, Klein, BEK, Klein, R, Wong, TY (Tien Yin), Duijn, Cornelia, Mitchell, P, Saw, SM, Fossarello, M, Wang, JJ, Polasek, O, Campbell, H, Rudan, I, Oostra, Ben, Uitterlinden, André, Hofman, Bert, Rivadeneira, Fernando, Amin, Najaf, Karssen, Lennart, Vingerling, Hans, Doering, A, Bettecken, T, Bencic, G, Gieger, C, Wichmann, HE, Wilson, JF, Venturini, C, Fleck, B, Cumberland, PM, Rahi, JS, Hammond, CJ, Hayward, C, Wright, AF, Paterson, AD, Baird, PN, Klaver, Caroline, Rotter, JI, Pirastu, M, Meitinger, T, Bailey-Wilson, JE, Stambolian, D, Simpson, CL, Wojciechowski, R, Oexle, K, Murgia, F, Portas, L, Li, XH, Verhoeven, Virginie, Vitart, V, Schache, M, Hosseini, SM, Hysi, PG, Raffel, LJ, Cotch, MF, Chew, E, Klein, BEK, Klein, R, Wong, TY (Tien Yin), Duijn, Cornelia, Mitchell, P, Saw, SM, Fossarello, M, Wang, JJ, Polasek, O, Campbell, H, Rudan, I, Oostra, Ben, Uitterlinden, André, Hofman, Bert, Rivadeneira, Fernando, Amin, Najaf, Karssen, Lennart, Vingerling, Hans, Doering, A, Bettecken, T, Bencic, G, Gieger, C, Wichmann, HE, Wilson, JF, Venturini, C, Fleck, B, Cumberland, PM, Rahi, JS, Hammond, CJ, Hayward, C, Wright, AF, Paterson, AD, Baird, PN, Klaver, Caroline, Rotter, JI, Pirastu, M, Meitinger, T, Bailey-Wilson, JE, and Stambolian, D
- Abstract
Refractive error (RE) is a complex, multifactorial disorder characterized by a mismatch between the optical power of the eye and its axial length that causes object images to be focused off the retina. The two major subtypes of RE are myopia (nearsightedness) and hyperopia (farsightedness), which represent opposite ends of the distribution of the quantitative measure of spherical refraction. We performed a fixed effects meta-analysis of genome-wide association results of myopia and hyperopia from 9 studies of European-derived populations: AREDS, KORA, FES, OGP-Talana, MESA, RSI, RSII, RSIII and ERF. One genome-wide significant region was observed for myopia, corresponding to a previously identified myopia locus on 8q12 (p = 1.25x10(-8)), which has been reported by Kiefer et al. as significantly associated with myopia age at onset and Verhoeven et al. as significantly associated to mean spherical-equivalent (MSE) refractive error. We observed two genome-wide significant associations with hyperopia. These regions overlapped with loci on 15q14 (minimum p value = 9.11x10(-11)) and 8q12 (minimum p value 1.82x10(-11)) previously reported for MSE and myopia age at onset. We also used an intermarker linkage-disequilibrium-based method for calculating the effective number of tests in targeted regional replication analyses. We analyzed myopia (which represents the closest phenotype in our data to the one used by Kiefer et al.) and showed replication of 10 additional loci associated with myopia previously reported by Kiefer et al. This is the first replication of these loci using myopia as the trait under analysis. "Replication-level'' association was also seen between hyperopia and 12 of Kiefer et al.'s published loci. For the loci that show evidence of association to both myopia and hyperopia, the estimated effect of the risk alleles were in opposite directions for the two traits. This suggests that these loci are important contributors to variation of refractive error acros
- Published
- 2014
30. Segregation einer 220-kb-Insertion in die Bande Xp21.1 in einer Familie mit Duchennescher Muskeldystrophie
- Author
-
Bettecken, T., primary, Grimm, T., additional, and Müller, C. R., additional
- Published
- 1989
- Full Text
- View/download PDF
31. Systematic mutation analysis of KIAA0767 and KIAA I646 in chromosome 22q-linked periodic catatonia
- Author
-
Stöber, G., Kohlmann, B., Iekiera, M., Rubie, C., Gawlik, M., Möller-Ehrlich, K., Meitinger, T., and Bettecken, T.
- Abstract
BACKGROUND: Periodic catatonia is a familial subtype of schizophrenia characterized by hyperkinetic and akinetic episodes, followed by a catatonic residual syndrome. The phenotype has been evaluated in two independent genome-wide linkage scans with evidence for a major locus on chromosome 15q15, and a second independent locus on chromosome 22qtel. METHODS: In the positional and brain-expressed candidate genes KIAA0767 and KIAA1646, we searched for variants in the complete exons and adjacent splice-junctions as well as in parts of the 5'- and 3'-untranslated regions by means of a systematic mutation screening in individuals from chromosome 22q-linked pedigrees. RESULTS: The mutation scan revealed 24 single nucleotide polymorphisms, among them two rare codon variants (KIAA0767: S159I; KIAA1646: V338G). However, both were neither found segregating with the disease in the respective pedigree nor found at a significant frequency in a case-control association sample. CONCLUSION: Starting from linkage signals at chromosome22qtel in periodic catatonia, we screened two positional brain-expressed candidate genes for genetic variation. Our study excludes genetic variations in the coding and putative promoter regions of KIAA0767 and KIAA1646 as causative factors for periodic catatonia.
- Published
- 2005
32. Linkage analysis in myopia
- Author
-
Rudolph, G, Kalpadakis, P, Dellantonio, K, Tasser, J, Bettecken, T, and Meitinger, T
- Subjects
ddc: 610 - Published
- 2004
33. Genetic relationship between five psychiatric disorders estimated from genome-wide SNPs
- Author
-
Lee, Shermin, Ripke, S., Neale, B.M., Faraone, S.V., Purcell, S.M., Perlis, R.H., Mowry, B.J., Thapar, A., Goddard, M.E., Witte, J.S., Absher, D., Agartz, I., Akil, H., Amin, F., Andreassen, O.A., Anjorin, A., Anney, R., Anttila, V., Arking, D.E., Asherson, P., Azevedo, M.H., Backlund, L., Badner, J.A., Bailey, A.J., Banaschewski, T., Barchas, J.D., Barnes, M.R., Barrett, T.B., Bass, N., Battaglia, A., Bauer, M., Bayes, M., Bellivier, F., Bergen, S.E., Berrettini, W., Betancur, C., Bettecken, T., Biederman, J., Binder, E.B., Black, D.W., Blackwood, D.H., Bloss, C.S., Boehnke, M., Boomsma, D.I., Breen, G., Breuer, R., Bruggeman, R., Cormican, P., Buccola, N.G., Buitelaar, J.K., Bunney, W.E., Buxbaum, J.D., Byerley, W.F., Byrne, E.M., Caesar, S., Cahn, W., Cantor, R.M., Casas, M., Chakravarti, A., Chambert, K., Choudhury, K., Cichon, S., Cloninger, C.R., Collier, D.A., Cook, E.H., Coon, H., Cormand, B., Corvin, A., Coryell, W.H., Craig, D.W., Craig, I.W., Crosbie, J., Cuccaro, M.L., Curtis, D., Czamara, D., Datta, S., Dawson, G., Day, R., Geus, E.J. de, Degenhardt, F., Djurovic, S., Donohoe, G.J., Doyle, A.E., Duan, J., Dudbridge, F., Duketis, E., Ebstein, R.P., Edenberg, H.J., Elia, J., Ennis, S., Etain, B., Fanous, A., Farmer, A.E., Ferrier, I.N., Flickinger, M., Fombonne, E., Foroud, T., Frank, J., Franke, B., et al., Lee, Shermin, Ripke, S., Neale, B.M., Faraone, S.V., Purcell, S.M., Perlis, R.H., Mowry, B.J., Thapar, A., Goddard, M.E., Witte, J.S., Absher, D., Agartz, I., Akil, H., Amin, F., Andreassen, O.A., Anjorin, A., Anney, R., Anttila, V., Arking, D.E., Asherson, P., Azevedo, M.H., Backlund, L., Badner, J.A., Bailey, A.J., Banaschewski, T., Barchas, J.D., Barnes, M.R., Barrett, T.B., Bass, N., Battaglia, A., Bauer, M., Bayes, M., Bellivier, F., Bergen, S.E., Berrettini, W., Betancur, C., Bettecken, T., Biederman, J., Binder, E.B., Black, D.W., Blackwood, D.H., Bloss, C.S., Boehnke, M., Boomsma, D.I., Breen, G., Breuer, R., Bruggeman, R., Cormican, P., Buccola, N.G., Buitelaar, J.K., Bunney, W.E., Buxbaum, J.D., Byerley, W.F., Byrne, E.M., Caesar, S., Cahn, W., Cantor, R.M., Casas, M., Chakravarti, A., Chambert, K., Choudhury, K., Cichon, S., Cloninger, C.R., Collier, D.A., Cook, E.H., Coon, H., Cormand, B., Corvin, A., Coryell, W.H., Craig, D.W., Craig, I.W., Crosbie, J., Cuccaro, M.L., Curtis, D., Czamara, D., Datta, S., Dawson, G., Day, R., Geus, E.J. de, Degenhardt, F., Djurovic, S., Donohoe, G.J., Doyle, A.E., Duan, J., Dudbridge, F., Duketis, E., Ebstein, R.P., Edenberg, H.J., Elia, J., Ennis, S., Etain, B., Fanous, A., Farmer, A.E., Ferrier, I.N., Flickinger, M., Fombonne, E., Foroud, T., Frank, J., Franke, B., and et al.
- Abstract
Item does not contain fulltext, Most psychiatric disorders are moderately to highly heritable. The degree to which genetic variation is unique to individual disorders or shared across disorders is unclear. To examine shared genetic etiology, we use genome-wide genotype data from the Psychiatric Genomics Consortium (PGC) for cases and controls in schizophrenia, bipolar disorder, major depressive disorder, autism spectrum disorders (ASD) and attention-deficit/hyperactivity disorder (ADHD). We apply univariate and bivariate methods for the estimation of genetic variation within and covariation between disorders. SNPs explained 17-29% of the variance in liability. The genetic correlation calculated using common SNPs was high between schizophrenia and bipolar disorder (0.68 +/- 0.04 s.e.), moderate between schizophrenia and major depressive disorder (0.43 +/- 0.06 s.e.), bipolar disorder and major depressive disorder (0.47 +/- 0.06 s.e.), and ADHD and major depressive disorder (0.32 +/- 0.07 s.e.), low between schizophrenia and ASD (0.16 +/- 0.06 s.e.) and non-significant for other pairs of disorders as well as between psychiatric disorders and the negative control of Crohn's disease. This empirical evidence of shared genetic etiology for psychiatric disorders can inform nosology and encourages the investigation of common pathophysiologies for related disorders.
- Published
- 2013
34. Campomelic dysplasia without sex reversal in a Turkish patient is due to mutation Ala119Val within the SOX9 gene
- Author
-
Koch G, Sibylle Jakubiczka, Bettecken T, Wieacker P, Beyhan Tüysüz, and Bernd Wollnik
- Subjects
Male ,Parents ,Turkey ,DNA Mutational Analysis ,Disorders of Sex Development ,SOX9 ,medicine.disease_cause ,Osteochondrodysplasias ,Pathology and Forensic Medicine ,Exon ,medicine ,Humans ,Point Mutation ,Genetics (clinical) ,Genetics ,Mutation ,business.industry ,Point mutation ,High Mobility Group Proteins ,Karyotype ,SOX9 Transcription Factor ,General Medicine ,Sex reversal ,medicine.disease ,Campomelic dysplasia ,Child, Preschool ,HMG-Box Domains ,Pediatrics, Perinatology and Child Health ,Anatomy ,Haploinsufficiency ,business ,Transcription Factors - Abstract
Campomelic dysplasia is a rare neonatal skeletal malformation syndrome mainly characterized by congenital bowing and angulation of long bones in combination with other skeletal and extraskeletal defects. Two thirds of karyotypic males exhibit male-to-female sex reversal. Point mutations within SOX9 in 17q24-25 or rearrangements upstream to SOX9 as well as a deletion of a complete gene, causing haploinsufficiency of the gene product, have been detected in some patients. Recurrent mutations appear to be rare and most mutations detected in campomelic dysplasia are family specific. Here, we report on a Turkish patient with a 46,XY karyotype affected by campomelic dysplasia without sex reversal. Sequencing the SOX9 gene revealed a heterozygous Ala119Val mutation in exon 1, coding for the highly conserved HMG-box of the gene. This mutation is not present in the parents' lymphocyte DNAs. The same mutation was recently reported in a patient with 46,XX karyotype. Additionally, our patient is homozygous for the common polymorphism c507C-->T, while both parents are heterozygous.
- Published
- 2001
35. Large scale international replication and meta-analysis study confirms association of the 15q14 locus with myopia. The CREAM consortium
- Author
-
Verhoeven, V.J.M. (Virginie), Hysi, P.G. (Pirro), Saw, S-M. (Seang-Mei), Vitart, V. (Veronique), Mirshahi, A. (Alireza), Guggenheim, J. (Jean), Cotch, M.F. (Mary Frances), Yamashiro, K. (Kenji), Baird, P.N. (Paul), Mackey, D.A. (David), Wojciechowski, R. (Robert), Ikram, M.K. (Kamran), Hewit, A.W. (Alex), Duggal, P. (Priya), Janmahasatian, S. (Sarayut), Khor, C.C., Fan, Q. (Qiao), Zhou, X. (Xinying), Young, T.L. (Terri), Tai, E.S. (Shyong), Goh, L.-K., Li, Y.J. (Yi), Aung, T. (Tin), Vithana, E.N. (Eranga), Teo, Y.Y. (Yik Ying), Tay, W.-T., Sim, X. (Xueling), Rudan, I. (Igor), Hayward, C. (Caroline), Wright, A.F. (Alan), Polasek, O. (Ozren), Campbell, H. (Harry), Wilson, J.F. (James), Fleck, B. (Brian), Nakata, I. (Isao), Yoshimura, N., Yamada, R. (Ryo), Matsuda, F. (Fumihiko), Ohno-Matsui, K. (Kyoko), Nag, A. (Abhishek), Mcmahon, G. (George), St Pourcain, B. (Beate), Lu, Y. (Yi), Rahi, J.S. (Jugnoo), Cumberland, P. (Phillippa), Bhattacharya, S. (Shoumo), Simpson, C.L. (Claire), Atwood, L.D. (Larry), Li, X. (Xiaohui), Raffel, L.J. (Leslie), Murgia, D. (Daniela), Portas, L. (Laura), Despriet, D.D.G. (Dominique), Koolwijk, L.M.E. (Leonieke) van, Wolfram, C. (Christian), Lackner, K.J. (Karl), Tönjes, A. (Anke), Mägi, R. (Reedik), Lehtimäki, T. (Terho), Kähönen, M. (Mika), Esko, T. (Tõnu), Metspalu, A. (Andres), Rantanen, T. (Taina), Pärssinen, O. (Olavi), Klein, B.E.K. (Barbara), Meitinger, T. (Thomas), Spector, T.D. (Timothy), Oostra, B.A. (Ben), Smith, A.V. (Davey), Jong, P.T.V.M. (Paulus) de, Hofman, A. (Albert), Amin, N. (Najaf), Karssen, L.C. (Lennart), Rivadeneira Ramirez, F. (Fernando), Vingerling, J.R. (Hans), Eiriksdottir, G. (Gudny), Gudnason, V. (Vilmundur), Döring, A. (Angela), Bettecken, T. (Thomas), Uitterlinden, A.G. (André), Williams, C. (Cathy), Zeller, T. (Tanja), Castagne, R. (Raphaële), Oexle, K. (Konrad), Duijn, C.M. (Cornelia) van, Iyengar, S.K. (Sudha), Mitchell, P. (Paul), Wang, J.J. (Jie Jin), Höhn, R. (René), Pfeiffer, A.F.H. (Andreas), Bailey-Wilson, J.E. (Joan), Stambolian, D.E. (Dwight), Wong, T.Y. (Tien Yin), Hammond, C.J. (Christopher), Klaver, C.C.W. (Caroline), Verhoeven, V.J.M. (Virginie), Hysi, P.G. (Pirro), Saw, S-M. (Seang-Mei), Vitart, V. (Veronique), Mirshahi, A. (Alireza), Guggenheim, J. (Jean), Cotch, M.F. (Mary Frances), Yamashiro, K. (Kenji), Baird, P.N. (Paul), Mackey, D.A. (David), Wojciechowski, R. (Robert), Ikram, M.K. (Kamran), Hewit, A.W. (Alex), Duggal, P. (Priya), Janmahasatian, S. (Sarayut), Khor, C.C., Fan, Q. (Qiao), Zhou, X. (Xinying), Young, T.L. (Terri), Tai, E.S. (Shyong), Goh, L.-K., Li, Y.J. (Yi), Aung, T. (Tin), Vithana, E.N. (Eranga), Teo, Y.Y. (Yik Ying), Tay, W.-T., Sim, X. (Xueling), Rudan, I. (Igor), Hayward, C. (Caroline), Wright, A.F. (Alan), Polasek, O. (Ozren), Campbell, H. (Harry), Wilson, J.F. (James), Fleck, B. (Brian), Nakata, I. (Isao), Yoshimura, N., Yamada, R. (Ryo), Matsuda, F. (Fumihiko), Ohno-Matsui, K. (Kyoko), Nag, A. (Abhishek), Mcmahon, G. (George), St Pourcain, B. (Beate), Lu, Y. (Yi), Rahi, J.S. (Jugnoo), Cumberland, P. (Phillippa), Bhattacharya, S. (Shoumo), Simpson, C.L. (Claire), Atwood, L.D. (Larry), Li, X. (Xiaohui), Raffel, L.J. (Leslie), Murgia, D. (Daniela), Portas, L. (Laura), Despriet, D.D.G. (Dominique), Koolwijk, L.M.E. (Leonieke) van, Wolfram, C. (Christian), Lackner, K.J. (Karl), Tönjes, A. (Anke), Mägi, R. (Reedik), Lehtimäki, T. (Terho), Kähönen, M. (Mika), Esko, T. (Tõnu), Metspalu, A. (Andres), Rantanen, T. (Taina), Pärssinen, O. (Olavi), Klein, B.E.K. (Barbara), Meitinger, T. (Thomas), Spector, T.D. (Timothy), Oostra, B.A. (Ben), Smith, A.V. (Davey), Jong, P.T.V.M. (Paulus) de, Hofman, A. (Albert), Amin, N. (Najaf), Karssen, L.C. (Lennart), Rivadeneira Ramirez, F. (Fernando), Vingerling, J.R. (Hans), Eiriksdottir, G. (Gudny), Gudnason, V. (Vilmundur), Döring, A. (Angela), Bettecken, T. (Thomas), Uitterlinden, A.G. (André), Williams, C. (Cathy), Zeller, T. (Tanja), Castagne, R. (Raphaële), Oexle, K. (Konrad), Duijn, C.M. (Cornelia) van, Iyengar, S.K. (Sudha), Mitchell, P. (Paul), Wang, J.J. (Jie Jin), Höhn, R. (René), Pfeiffer, A.F.H. (Andreas), Bailey-Wilson, J.E. (Joan), Stambolian, D.E. (Dwight), Wong, T.Y. (Tien Yin), Hammond, C.J. (Christopher), and Klaver, C.C.W. (Caroline)
- Abstract
Myopia is a complex genetic disorder and a common cause of visual impairment among working age adults. Genome-wide association studies have identified susceptibility loci on chromosomes 15q14 and 15q25 in Caucasian populations of European ancestry. Here, we present a confirmation and meta-analysis study in which we assessed whether these two loci are also associated with myopia in other populations. The study population comprised 31 cohorts from the Consortium of Refractive Error and Myopia (CREAM) representing 4 different continents with 55,177 individuals; 42,845 Caucasians and 12,332 Asians. We performed a meta-analysis of 14 single nucleotide polymorphisms (SNPs) on 15q14 and 5 SNPs on 15q25 using linear regression analysis with spherical equivalent as a quantitative outcome, adjusted for age and sex. We calculated the odds ratio (OR) of myopia versus hyperopia for carriers of the top-SNP alleles using a fixed effects meta-analysis. At locus 15q14, all SNPs were significantly replicated, with the lowest P value 3.87 × 10 -12 for SNP rs634990 in Caucasians, and 9.65 × 10 -4 for rs8032019 in Asians. The overall meta-analysis provided P value 9.20 × 10 -23 for the top SNP rs634990. The risk of myopia versus hyperopia was OR 1.88 (95 % CI 1.64, 2.16, P < 0.001) for homozygous carriers of the risk allele at the top SNP rs634990, and OR 1.33 (95 % CI 1.19, 1.49, P < 0.001) for heterozygous carriers. SNPs at locus 15q25 did not replicate significantly (P value 5.81 × 10 -2 for top SNP rs939661). We conclude that common variants at chromosome 15q14 influence susceptibility for myopia in Caucasian and Asian populations world-wide.
- Published
- 2012
- Full Text
- View/download PDF
36. Large scale international replication and meta-analysis study confirms association of the 15q14 locus with myopia. The CREAM consortium
- Author
-
Verhoeven, VJM, Hysi, PG, Saw, S-M, Vitart, V, Mirshahi, A, Guggenheim, JA, Cotch, MF, Yamashiro, K, Baird, PN, Mackey, DA, Wojciechowski, R, Ikram, MK, Hewitt, AW, Duggal, P, Janmahasatian, S, Khor, C-C, Fan, Q, Zhou, X, Young, TL, Tai, E-S, Goh, L-K, Li, Y-J, Aung, T, Vithana, E, Teo, Y-Y, Tay, W, Sim, X, Rudan, I, Hayward, C, Wright, AF, Polasek, O, Campbell, H, Wilson, JF, Fleck, BW, Nakata, I, Yoshimura, N, Yamada, R, Matsuda, F, Ohno-Matsui, K, Nag, A, McMahon, G, St Pourcain, B, Lu, Y, Rahi, JS, Cumberland, PM, Bhattacharya, S, Simpson, CL, Atwood, LD, Li, X, Raffel, LJ, Murgia, F, Portas, L, Despriet, DDG, van Koolwijk, LME, Wolfram, C, Lackner, KJ, Toenjes, A, Maegi, R, Lehtimaki, T, Kahonen, M, Esko, T, Metspalu, A, Rantanen, T, Parssinen, O, Klein, BE, Meitinger, T, Spector, TD, Oostra, BA, Smith, AV, de Jong, PTVM, Hofman, A, Amin, N, Karssen, LC, Rivadeneira, F, Vingerling, JR, Eiriksdottir, G, Gudnason, V, Doering, A, Bettecken, T, Uitterlinden, AG, Williams, C, Zeller, T, Castagne, R, Oexle, K, van Duijn, CM, Iyengar, SK, Mitchell, P, Wang, JJ, Hoehn, R, Pfeiffer, N, Bailey-Wilson, JE, Stambolian, D, Wong, T-Y, Hammond, CJ, Klaver, CCW, Verhoeven, VJM, Hysi, PG, Saw, S-M, Vitart, V, Mirshahi, A, Guggenheim, JA, Cotch, MF, Yamashiro, K, Baird, PN, Mackey, DA, Wojciechowski, R, Ikram, MK, Hewitt, AW, Duggal, P, Janmahasatian, S, Khor, C-C, Fan, Q, Zhou, X, Young, TL, Tai, E-S, Goh, L-K, Li, Y-J, Aung, T, Vithana, E, Teo, Y-Y, Tay, W, Sim, X, Rudan, I, Hayward, C, Wright, AF, Polasek, O, Campbell, H, Wilson, JF, Fleck, BW, Nakata, I, Yoshimura, N, Yamada, R, Matsuda, F, Ohno-Matsui, K, Nag, A, McMahon, G, St Pourcain, B, Lu, Y, Rahi, JS, Cumberland, PM, Bhattacharya, S, Simpson, CL, Atwood, LD, Li, X, Raffel, LJ, Murgia, F, Portas, L, Despriet, DDG, van Koolwijk, LME, Wolfram, C, Lackner, KJ, Toenjes, A, Maegi, R, Lehtimaki, T, Kahonen, M, Esko, T, Metspalu, A, Rantanen, T, Parssinen, O, Klein, BE, Meitinger, T, Spector, TD, Oostra, BA, Smith, AV, de Jong, PTVM, Hofman, A, Amin, N, Karssen, LC, Rivadeneira, F, Vingerling, JR, Eiriksdottir, G, Gudnason, V, Doering, A, Bettecken, T, Uitterlinden, AG, Williams, C, Zeller, T, Castagne, R, Oexle, K, van Duijn, CM, Iyengar, SK, Mitchell, P, Wang, JJ, Hoehn, R, Pfeiffer, N, Bailey-Wilson, JE, Stambolian, D, Wong, T-Y, Hammond, CJ, and Klaver, CCW
- Abstract
Myopia is a complex genetic disorder and a common cause of visual impairment among working age adults. Genome-wide association studies have identified susceptibility loci on chromosomes 15q14 and 15q25 in Caucasian populations of European ancestry. Here, we present a confirmation and meta-analysis study in which we assessed whether these two loci are also associated with myopia in other populations. The study population comprised 31 cohorts from the Consortium of Refractive Error and Myopia (CREAM) representing 4 different continents with 55,177 individuals; 42,845 Caucasians and 12,332 Asians. We performed a meta-analysis of 14 single nucleotide polymorphisms (SNPs) on 15q14 and 5 SNPs on 15q25 using linear regression analysis with spherical equivalent as a quantitative outcome, adjusted for age and sex. We calculated the odds ratio (OR) of myopia versus hyperopia for carriers of the top-SNP alleles using a fixed effects meta-analysis. At locus 15q14, all SNPs were significantly replicated, with the lowest P value 3.87 × 10(-12) for SNP rs634990 in Caucasians, and 9.65 × 10(-4) for rs8032019 in Asians. The overall meta-analysis provided P value 9.20 × 10(-23) for the top SNP rs634990. The risk of myopia versus hyperopia was OR 1.88 (95 % CI 1.64, 2.16, P < 0.001) for homozygous carriers of the risk allele at the top SNP rs634990, and OR 1.33 (95 % CI 1.19, 1.49, P < 0.001) for heterozygous carriers. SNPs at locus 15q25 did not replicate significantly (P value 5.81 × 10(-2) for top SNP rs939661). We conclude that common variants at chromosome 15q14 influence susceptibility for myopia in Caucasian and Asian populations world-wide.
- Published
- 2012
37. Large scale international replication and meta-analysis study confirms association of the 15q14 locus with myopia. The CREAM consortium
- Author
-
Verhoeven, Virginie, Hysi, PG, Saw, SM, Vitart, V, Mirshahi, A, Guggenheim, JA, Cotch, MF, Yamashiro, K, Baird, PN, Mackey, DA, Wojciechowski, R, Ikram, Kamran, Hewitt, AW, Duggal, P, Janmahasatian, S, Khor, CC, Fan, Q, Zhou, X, Young, TL, Tai, ES, Goh, LK, Li, YJ, Aung, T, Vithana, E, Teo, YY, Tay, W, Sim, X, Rudan, I, Hayward, C, Wright, AF, Polasek, O, Campbell, H, Wilson, JF, Fleck, BW, Nakata, I, Yoshimura, N, Yamada, R, Matsuda, F, Ohno-Matsui, K, Nag, A, McMahon, G, St Pourcain, B, Lu, Y (Yi), Rahi, JS, Cumberland, PM, Bhattacharya, S, Simpson, CL, Atwood, LD, Li, XH, Raffel, LJ, Murgia, F, Portas, L, Despriet, Dominiek, Koolwijk, Leonieke, Wolfram, C, Lackner, KJ, Tonjes, A, Magi, R, Lehtimaki, T, Kahonen, M, Esko, T, Metspalu, A, Rantanen, T, Parssinen, O, Klein, BE, Meitinger, T, Spector, TD, Oostra, Ben, Smith, AV, de Jong, PTVM (Paulus), Hofman, Bert, Amin, Najaf, Karssen, Lennart, Rivadeneira, Fernando, Vingerling, Hans, Eiriksdottir, G, Gudnason, V, Doring, A, Bettecken, T, Uitterlinden, André, Williams, C, Zeller, T, Castagne, R, Oexle, K, Duijn, Cornelia, Iyengar, SK, Mitchell, P, Wang, JJ, Hohn, R, Pfeiffer, N, Bailey-Wilson, JE, Stambolian, D, Wong, TY, Hammond, CJ, Klaver, Caroline, Verhoeven, Virginie, Hysi, PG, Saw, SM, Vitart, V, Mirshahi, A, Guggenheim, JA, Cotch, MF, Yamashiro, K, Baird, PN, Mackey, DA, Wojciechowski, R, Ikram, Kamran, Hewitt, AW, Duggal, P, Janmahasatian, S, Khor, CC, Fan, Q, Zhou, X, Young, TL, Tai, ES, Goh, LK, Li, YJ, Aung, T, Vithana, E, Teo, YY, Tay, W, Sim, X, Rudan, I, Hayward, C, Wright, AF, Polasek, O, Campbell, H, Wilson, JF, Fleck, BW, Nakata, I, Yoshimura, N, Yamada, R, Matsuda, F, Ohno-Matsui, K, Nag, A, McMahon, G, St Pourcain, B, Lu, Y (Yi), Rahi, JS, Cumberland, PM, Bhattacharya, S, Simpson, CL, Atwood, LD, Li, XH, Raffel, LJ, Murgia, F, Portas, L, Despriet, Dominiek, Koolwijk, Leonieke, Wolfram, C, Lackner, KJ, Tonjes, A, Magi, R, Lehtimaki, T, Kahonen, M, Esko, T, Metspalu, A, Rantanen, T, Parssinen, O, Klein, BE, Meitinger, T, Spector, TD, Oostra, Ben, Smith, AV, de Jong, PTVM (Paulus), Hofman, Bert, Amin, Najaf, Karssen, Lennart, Rivadeneira, Fernando, Vingerling, Hans, Eiriksdottir, G, Gudnason, V, Doring, A, Bettecken, T, Uitterlinden, André, Williams, C, Zeller, T, Castagne, R, Oexle, K, Duijn, Cornelia, Iyengar, SK, Mitchell, P, Wang, JJ, Hohn, R, Pfeiffer, N, Bailey-Wilson, JE, Stambolian, D, Wong, TY, Hammond, CJ, and Klaver, Caroline
- Abstract
Myopia is a complex genetic disorder and a common cause of visual impairment among working age adults. Genome-wide association studies have identified susceptibility loci on chromosomes 15q14 and 15q25 in Caucasian populations of European ancestry. Here, we present a confirmation and meta-analysis study in which we assessed whether these two loci are also associated with myopia in other populations. The study population comprised 31 cohorts from the Consortium of Refractive Error and Myopia (CREAM) representing 4 different continents with 55,177 individuals; 42,845 Caucasians and 12,332 Asians. We performed a meta-analysis of 14 single nucleotide polymorphisms (SNPs) on 15q14 and 5 SNPs on 15q25 using linear regression analysis with spherical equivalent as a quantitative outcome, adjusted for age and sex. We calculated the odds ratio (OR) of myopia versus hyperopia for carriers of the top-SNP alleles using a fixed effects meta-analysis. At locus 15q14, all SNPs were significantly replicated, with the lowest P value 3.87 x 10(-12) for SNP rs634990 in Caucasians, and 9.65 x 10(-4) for rs8032019 in Asians. The overall meta-analysis provided P value 9.20 x 10(-23) for the top SNP rs634990. The risk of myopia versus hyperopia was OR 1.88 (95 % CI 1.64, 2.16, P < 0.001) for homozygous carriers of the risk allele at the top SNP rs634990, and OR 1.33 (95 % CI 1.19, 1.49, P < 0.001) for heterozygous carriers. SNPs at locus 15q25 did not replicate significantly (P value 5.81 x 10(-2) for top SNP rs939661). We conclude that common variants at chromosome 15q14 influence susceptibility for myopia in Caucasian and Asian populations world-wide.
- Published
- 2012
38. Proteomic-based genotyping in a mouse model of trait anxiety exposes disease: relevant pathways
- Author
-
Ditzen, C., Varadarajulu, J., Czibere, L., Gonik, M., Targosz, B., Hambsch, B., Bettecken, T., Kessler, Melanie, Frank, Elisabeth T, Bunck, M., Teplytska, L., Erhardt, A., Holsboer, F., Muller-Myhsok, B., Landgraf, R., Turck, C., Ditzen, C., Varadarajulu, J., Czibere, L., Gonik, M., Targosz, B., Hambsch, B., Bettecken, T., Kessler, Melanie, Frank, Elisabeth T, Bunck, M., Teplytska, L., Erhardt, A., Holsboer, F., Muller-Myhsok, B., Landgraf, R., and Turck, C.
- Published
- 2010
39. Variants within the GABA transaminase (ABAT) gene region are associated with somatosensory evoked EEG potentials in families at high risk for affective disorders
- Author
-
Wegerer, M., primary, Adena, S., additional, Pfennig, A., additional, Czamara, D., additional, Sailer, U., additional, Bettecken, T., additional, Müller-Myhsok, B., additional, Modell, S., additional, and Ising, M., additional
- Published
- 2012
- Full Text
- View/download PDF
40. Searching for biomarkers in a historic sample of Amyotrophic Lateral Sclerosis – The Munich Historic Brain Bank Project
- Author
-
Büll, D, primary, Sato, M, additional, Burgmaier, W, additional, Bettecken, T, additional, Weber, M, additional, Rein, T, additional, Uhr, M, additional, and Schmidt, U, additional
- Published
- 2011
- Full Text
- View/download PDF
41. A 400-kb tandem duplication within the dystrophin gene leads to severe Becker muscular dystrophy
- Author
-
Ralf Gold, Bettecken T, Heinz Reichmann, Wolfram Kress, and Clemens R. Müller
- Subjects
Adult ,Electrophoresis ,Male ,Biology ,Muscular Dystrophies ,Dystrophin ,Exon ,Gene duplication ,medicine ,Humans ,Muscular dystrophy ,Gene ,Southern blot ,Repetitive Sequences, Nucleic Acid ,Genetics ,DNA ,Exons ,medicine.disease ,Phenotype ,Immunohistochemistry ,Blotting, Southern ,Neurology ,Multigene Family ,biology.protein ,Female ,Neurology (clinical) ,Tandem exon duplication - Abstract
We describe a family with a large duplication of exons 2–16 of the dystrophin gene. It was characterized by immunocytochemistry, field-inversion gel electrophoresis and quantitative Southern blots. Our observations are of clinical interest in that they demonstrate an intermediate disease course despite a disrupted reading frame of dystrophin as postulated from exon-intron boundaries. We discuss possible mechanisms which may explain the unusual phenotype in our patient.
- Published
- 1994
42. More CLEC16A gene variants associated with multiple sclerosis
- Author
-
Nischwitz, S., primary, Cepok, S., additional, Kroner, A., additional, Wolf, C., additional, Knop, M., additional, Müller-Sarnowski, F., additional, Pfister, H., additional, Rieckmann, P., additional, Hemmer, B., additional, Ising, M., additional, Uhr, M., additional, Bettecken, T., additional, Holsboer, F., additional, Müller-Myhsok, B., additional, and Weber, F., additional
- Published
- 2010
- Full Text
- View/download PDF
43. TMEM132D, a new candidate for anxiety phenotypes: evidence from human and mouse studies
- Author
-
Erhardt, A, primary, Czibere, L, additional, Roeske, D, additional, Lucae, S, additional, Unschuld, P G, additional, Ripke, S, additional, Specht, M, additional, Kohli, M A, additional, Kloiber, S, additional, Ising, M, additional, Heck, A, additional, Pfister, H, additional, Zimmermann, P, additional, Lieb, R, additional, Pütz, B, additional, Uhr, M, additional, Weber, P, additional, Deussing, J M, additional, Gonik, M, additional, Bunck, M, additional, Keßler, M S, additional, Frank, E, additional, Hohoff, C, additional, Domschke, K, additional, Krakowitzky, P, additional, Maier, W, additional, Bandelow, B, additional, Jacob, C, additional, Deckert, J, additional, Schreiber, S, additional, Strohmaier, J, additional, Nöthen, M, additional, Cichon, S, additional, Rietschel, M, additional, Bettecken, T, additional, Keck, M E, additional, Landgraf, R, additional, Müller-Myhsok, B, additional, Holsboer, F, additional, and Binder, E B, additional
- Published
- 2010
- Full Text
- View/download PDF
44. A genome-wide association study points to multiple loci predicting antidepressant treatment outcome in depression
- Author
-
Ising, M, primary, Lucae, S, additional, Binder, EB, additional, Bettecken, T, additional, Uhr, M, additional, Ripke, S, additional, Kohli, MA, additional, Hennings, JM, additional, Horstmann, S, additional, Kloiber, S, additional, Menke, A, additional, Bondy, B, additional, Rupprecht, R, additional, Domschke, K, additional, Baune, BT, additional, Arolt, V, additional, Rush, AJ, additional, Holsboer, F, additional, and Müller-Myhsok, B, additional
- Published
- 2009
- Full Text
- View/download PDF
45. The Munich PTSD Biomarker Study (MPBS)
- Author
-
Schmidt, U, primary, Gall-Kleebach, D, additional, Pfister, H, additional, Czesny, N, additional, Spoormaker, VI, additional, Rein, T, additional, Uhr, M, additional, Bettecken, T, additional, Holsboer, F, additional, and Ising, M, additional
- Published
- 2009
- Full Text
- View/download PDF
46. The neuronal transporter gene SLC6A15 confers risk to major depression
- Author
-
Lucae, S, primary, Kohli, MA, additional, Schmidt, MV, additional, Sämann, PG, additional, Demirkan, A, additional, Hek, K, additional, Salyakina, D, additional, Ripke, S, additional, Roeske, D, additional, van Duijn, CM, additional, Uhr, M, additional, Bettecken, T, additional, Holsboer, F, additional, Müller-Myhsok, B, additional, and Binder, EB, additional
- Published
- 2009
- Full Text
- View/download PDF
47. Characterisation of DNA methylation marks in stress exposed hippocampal astrocytes
- Author
-
Zimmermann, N, primary, Zschocke, J, additional, Bettecken, T, additional, Pütz, B, additional, Holsboer, F, additional, and Rein, T, additional
- Published
- 2009
- Full Text
- View/download PDF
48. Polymorphisms within the 4-aminobutyrate aminotransferase gene are associated with long-latency somatosensory potentials in families vulnerable for affective disorders
- Author
-
Wegerer, M, primary, Adena, S, additional, Binder, EB, additional, Huber, J, additional, Sailer, U, additional, Bettecken, T, additional, Müller-Myhsok, B, additional, Modell, S, additional, Holsboer, F, additional, and Ising, M, additional
- Published
- 2009
- Full Text
- View/download PDF
49. Proteomic-based genotyping in a mouse model of trait anxiety exposes disease-relevant pathways
- Author
-
Ditzen, C, primary, Varadarajulu, J, additional, Czibere, L, additional, Gonik, M, additional, Targosz, B S, additional, Hambsch, B, additional, Bettecken, T, additional, Keßler, M S, additional, Frank, E, additional, Bunck, M, additional, Teplytska, L, additional, Erhardt, A, additional, Holsboer, F, additional, Müller-Myhsok, B, additional, Landgraf, R, additional, and Turck, C W, additional
- Published
- 2009
- Full Text
- View/download PDF
50. Mitochondrial 12S rRNA susceptibility mutations in aminoglycoside-associated and idiopathic bilateral vestibulopathy
- Author
-
Elstner, M., primary, Schmidt, C., additional, Zingler, V.C., additional, Prokisch, H., additional, Bettecken, T., additional, Elson, J.L., additional, Rudolph, G., additional, Bender, A., additional, Halmagyi, G.M., additional, Brandt, T., additional, Strupp, M., additional, and Klopstock, T., additional
- Published
- 2008
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.