43 results on '"Berryman S"'
Search Results
2. Manufacturing Bill-of-Materials Plus Operations Visualization Using D3
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Bhat, P., primary, Berryman, S., additional, Burkhardt, A., additional, Cho, M., additional, Ferkau, S., additional, Gharbiah, H., additional, Johnston, K., additional, Kaiser, A., additional, Lynch, K., additional, Mittman, S., additional, Risch, Q., additional, and Swansen, M., additional
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- 2021
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3. Method for Extraction and Multielement Analysis of Hypogymnia physodes samples from the Athabasca Oil Sands Region
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Edgerton, E.S., primary, Fort, J.M., additional, Baumann, K., additional, Graney, J.R., additional, Landis, M.S., additional, Berryman, S., additional, and Krupa, S., additional
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- 2012
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4. Detection of Bovine Antibodies against a Conserved Capsid Epitope as the Basis of a Novel Universal Serological Test for Foot-and-Mouth Disease
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Asfor, A. S., primary, Howe, N., additional, Grazioli, S., additional, Berryman, S., additional, Parekh, K., additional, Wilsden, G., additional, Ludi, A., additional, King, D. P., additional, Parida, S., additional, Brocchi, E., additional, and Tuthill, T. J., additional
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- 2020
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5. Detection of antibodies against a conserved capsid epitope as the basis of a novel universal serological test for foot-and-mouth disease
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Asfor, A, primary, Howe, N, additional, Grazioli, S, additional, Berryman, S, additional, Parekh, K, additional, Wilsden, G, additional, Ludi, A, additional, King, DP, additional, Parida, S, additional, Brocchi, E, additional, and Tuthill, TJ, additional
- Published
- 2019
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6. Spatial patterns of cadmium and lead deposition on and adjacent to National Park Service lands in the vicinity of Red Dog Mine, Alaska
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Hasselbach, L., primary, Ver Hoef, J.M., additional, Ford, J., additional, Neitlich, P., additional, Crecelius, E., additional, Berryman, S., additional, Wolk, B., additional, and Bohle, T., additional
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- 2005
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7. Nutritional status of patients with amyotrophic lateral sclerosis: relation to the proximity of death
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Kasarskis, EJ, primary, Berryman, S, additional, Vanderleest, JG, additional, Schneider, AR, additional, and McClain, CJ, additional
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- 1996
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8. Working Class without Work: High School Students in a De-Industrializing Economy. By Lois Weis. Routledge, 1990. 214 pp. $13.95
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Berryman, S. E., primary
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- 1992
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9. Extracorporeal membrane oxygenation in a Scottish intensive care unit.
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Berryman S
- Subjects
- *
EXTRACORPOREAL membrane oxygenation , *HEALTH care teams , *INTENSIVE care nursing , *INTENSIVE care units , *PATIENT-family relations , *NURSING assessment , *HEALTH outcome assessment , *PROFESSIONAL employee training , *REFLECTION (Philosophy) , *TREATMENT effectiveness , *INFLUENZA A virus, H1N1 subtype , *EDUCATION , *ECONOMICS ,RESPIRATORY insufficiency treatment - Abstract
I reflected on the training I had on an extraordinary treatment for profound respiratory failure. The result of training enabled us to successfully treat a young female with the influenza A virus with extracorporeal membrane oxygenation (ECMO). I report the positive outcome that occurred, while continuing to run a busy general intensive care unit (ICU). She was the first of six patients who were all successfully treated with ECMO. Ten trained and experienced critical care nurses and two doctors attended the ECMO training course provided by the national centre in the UK. Five patients had already received ECMO therapy in the Scottish specialist unit (over the period of 8 years). As our Scottish specialist unit purchased exactly the same equipment as the national centre, it was easier for the multidisciplinary team to utilize their new-found knowledge and treat future patients with ECMO. With the predicted swine flu (H1N1) pandemic and the subsequent demand for critical care beds, funding was obtained to facilitate ECMO training. The potential need for increased provision of ECMO therapies was highlighted by recent events in Australia and New Zealand. Their most recent winter produced 68 patients requiring ECMO, whereas the previous year had manifested only three. Using our new equipment and adapted protocols from the national centre, we used these new skills to treat our first patient in October 2009. Johns' reflective practice tool was used to evaluate the care provided. Our patient was on ECMO for 9 days. She went on to make a remarkable recovery and was discharged from the ICU 1 week after ECMO was discontinued. She was discharged to the cardiothoracic high-dependency unit, where she was successfully rehabilitated. We were able to successfully treat a young lady, while providing the care for all other patients. This was a complex treatment, one that uses many resources including time and finance. Now that we have all the equipment, the necessary training and the knowledge, we can continue to deliver this service to the public in our locality. [ABSTRACT FROM AUTHOR]
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- 2010
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10. Assessment protocol for serial casting after botulinum toxin A injections to treat equinus gait.
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Kelly B, MacKay-Lyons MJ, Berryman S, Hyndman J, and Wood E
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- 2008
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11. Characteristics of deoxyribonucleic acid polymerase activity in nuclear and supernatant fractions of cultured mouse cells
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Lindsay, J. G., Berryman, S., and Adams, R. L. P.
- Abstract
1. DNA polymerase activity is present in both nuclear and supernatant fractions prepared from rapidly dividing L929 mouse cells. 2. Nuclear preparations are 2–5 times more active with added native DNA as template and the supernatant fractions show an equivalent preference for heat-denatured DNA. 3. Isolated nuclei can carry on limited DNA synthesis in the absence of added template but are stimulated five- to ten-fold by addition of 50μg of native DNA per assay. 4. DNA polymerase activity can be released from intact nuclei by ultrasonic treatment or by extraction with 1.5m-potassium chloride. 5. The activities in nuclear and supernatant fractions, with their preferred templates, respond similarly to changes in pH and Mg2+ and K+ concentrations. 6. Maximal enzyme activity is approached with 40μg of DNA per assay and activation of the DNA template by treatment with deoxyribonuclease does not decrease the amount of DNA required to reach saturation. 7. The nuclear enzyme, incubated with native DNA, is markedly inhibited by the addition of heat-denatured DNA to the assay. In contrast, the supernatant DNA polymerase activity on denatured templates is not affected by the presence of native DNA. 8. The nuclear enzyme exhibits high activity in the absence of one or more deoxyribonucleoside triphosphates but this is much diminished after partial purification of the enzyme by precipitation at pH5 and fractionation on Sephadex G-200 columns. 9. The 3H-labelled DNA products formed by Sephadex-purified nuclear and supernatant fractions, with their preferred templates, were found to be resistant to treatment with exonuclease I. Alkali-denaturation of the 3H-labelled DNA products rendered them susceptible to attack by exonuclease I. 10. Analysis of the products on alkaline sucrose density gradients suggests that the newly synthesized material may not be covalently bound to the original DNA template. 11. By using their preferred templates the specific activity of supernatant fractions varies markedly with the position of the cells in the cell-cycle, but the specific activity of nuclear fractions varies only slightly.
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- 1970
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12. Use of automated reminder letters to improve diabetes management in primary care: Outcomes of a quality improvement initiative
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Berryman, S. H., Sick, B. T., Qi Wang, M. S., Swan, P. J., and Anne Weber-Main
13. Wilford Seymour Conrow
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Artists & Designers, Berryman, S., Artists & Designers, and Berryman, S.
14. Deoxyribonucleoside triphosphate pools in synchronized and drug-inhibited L929 cells
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Adams, R.L.P., primary, Berryman, S., additional, and Thomson, A., additional
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- 1971
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15. Impact of Virtual Care on Outpatient Urinary Tract Infection Management.
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DeWitt-Foy ME, Albersheim J, Grove S, Hamid L, Berryman S, Freese R, and Elliott SP
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- Adult, Humans, Anti-Bacterial Agents therapeutic use, Hospitalization, Retrospective Studies, Telemedicine, Outpatients, Urinary Tract Infections diagnosis, Urinary Tract Infections drug therapy, Urinary Tract Infections complications
- Abstract
Objective: To examine the effect of virtual care on urine testing, antibiotic prescription patterns, and outcomes of care in urinary tract infection (UTI) management., Methods: We conducted retrospective analysis of adults treated for UTI in an ambulatory setting across a large health system from March 2020-2021. Outcomes included urine testing, antibiotic prescription, and retreatment or hospitalization, stratified by in-person vs virtual visit. Multivariable logistic regression was performed to examine factors contributing to outcomes., Results: Significantly fewer patients seen virtually had urine testing as compared to those seen in-person (19% vs 69%, P <.001). On multivariable logistic regression analysis, virtual visit was the most significant predictor of urine testing, associated with an 86% reduction in the odds of urine testing (odds ratio (OR) 0.14, P <.001). Having a complicated UTI did not affect the likelihood of urine testing (OR 1.0, P = .95). Patients seen virtually were more likely to have a subsequent repeat ambulatory UTI visit (OR 1.16) or repeat antibiotic prescription (1.06) more than 2 weeks after the index encounter, though no more likely to be hospitalized for UTI (OR 1.00)., Conclusion: Virtual care for UTI is associated with a significant reduction in urine testing and an increase in repeat UTI encounters and additional antibiotics among patients with complicated and uncomplicated UTIs., Competing Interests: Declaration of Competing Interest SPE: consultant and speaker for Boston Scientific, PI of clinical trial and consultant for urotronic, investment interest for percuvision. The other authors report no conflict of interest., (Copyright © 2023. Published by Elsevier Inc.)
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- 2023
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16. Impacts on tundra vegetation from heavy metal-enriched fugitive dust on National Park Service lands along the Red Dog Mine haul road, Alaska.
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Neitlich PN, Berryman S, Geiser LH, Mines A, and Shiel AE
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- Alaska, Bayes Theorem, Cadmium analysis, Dust analysis, Environmental Monitoring, Lead, Parks, Recreational, Tundra, Zinc analysis, Lichens, Metals, Heavy analysis, Soil Pollutants analysis
- Abstract
The DeLong Mountain Transportation System (DMTS) haul road links the Red Dog Mine-one of the world's largest zinc mines-with a shipping port on the Chukchi Sea in northwest Alaska, USA. The road traverses 32 km of National Park Service (NPS) lands managed by Cape Krusenstern National Monument (CAKR). Fugitive dusts from ore concentrate transport and mining operations have dispersed zinc (Zn), lead (Pb), cadmium (Cd), and metal sulfides onto NPS lands since the mine began operating in 1989. This study assessed the effects of metal-enriched road dusts on the diversity and community structure of lichens, bryophytes, and vascular plants in dwarf-shrub tundra within CAKR. In a Bayesian posterior predictions model, lichen species richness (LSR) was highly correlated to distance from the haul road and was distributed on the landscape consistently with the spatial patterns of Zn, Pb and Cd patterns published earlier in this journal. The mean modeled LSR of the 3000-4000 m distance class was 41.3, and LSR decreased progressively down to 9.4 species in the 0-50 m class. An ordination of 93 lichen species by 91 plots revealed strong community patterns based on distance from the haul road. The major community gradient was highly correlated (r = 0.99) with LSR and negatively correlated with Cd, Pb and Zn (-0.79 < r < -0.74). Ordinations of bryophyte classes showed less response than lichens to distance from the road and heavy metals values, and vascular plant ordination showed less still. Measures of bryophyte health such as the midrib blackening and frond width of Hylocomium splendens were positively correlated with distance from the haul road and negatively correlated with this same suite of elements. A total area of approximately 55 km2 showed moderate to strong impacts on lichens from fugitive dusts. This is equivalent to an area of almost 1 km on both sides of the haul road running 32 km through CAKR., Competing Interests: The authors have declared that no competing interests exist.
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- 2022
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17. Image-based phenotyping of disaggregated cells using deep learning.
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Berryman S, Matthews K, Lee JH, Duffy SP, and Ma H
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- Cell Line, Tumor, Humans, Intracellular Space diagnostic imaging, Microscopy, Fluorescence, Phenotype, Cells classification, Deep Learning, Image Processing, Computer-Assisted methods, Single-Cell Analysis methods
- Abstract
The ability to phenotype cells is fundamentally important in biological research and medicine. Current methods rely primarily on fluorescence labeling of specific markers. However, there are many situations where this approach is unavailable or undesirable. Machine learning has been used for image cytometry but has been limited by cell agglomeration and it is currently unclear if this approach can reliably phenotype cells that are difficult to distinguish by the human eye. Here, we show disaggregated single cells can be phenotyped with a high degree of accuracy using low-resolution bright-field and non-specific fluorescence images of the nucleus, cytoplasm, and cytoskeleton. Specifically, we trained a convolutional neural network using automatically segmented images of cells from eight standard cancer cell-lines. These cells could be identified with an average F1-score of 95.3%, tested using separately acquired images. Our results demonstrate the potential to develop an "electronic eye" to phenotype cells directly from microscopy images.
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- 2020
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18. Solid-state nanopore fabrication by automated controlled breakdown.
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Waugh M, Briggs K, Gunn D, Gibeault M, King S, Ingram Q, Jimenez AM, Berryman S, Lomovtsev D, Andrzejewski L, and Tabard-Cossa V
- Subjects
- Automation, Membranes, Artificial, Nanopores, Nanotechnology instrumentation
- Abstract
Solid-state nanopores are now well established as single-biomolecule sensors that hold great promise as sensing elements in diagnostic and sequencing applications. However, until recently this promise has been limited by the expensive, labor-intensive, and low-yield methods used to fabricate low-noise and precisely sized pores. To address this problem, we pioneered a low-cost and scalable solid-state nanopore fabrication method, termed controlled breakdown (CBD), which is rapidly becoming the method of choice for fabricating solid-state nanopores. Since its initial development, nanopore research groups around the world have applied and adapted the CBD method in a variety of ways, with varying levels of success. In this work, we present our accumulated knowledge of nanopore fabrication by CBD, including a detailed description of the instrumentation, software, and procedures required to reliably fabricate low-noise and precisely sized solid-state nanopores with a yield of >85% in less than 1 h. The assembly instructions for the various custom instruments can be found in the Supplementary Manual, and take approximately a day to complete, depending on the unit that the user is building and their level of skill with mechanical and electrical assembly. Unlike traditional beam-based nanopore fabrication technologies, the methods presented here are accessible to non-experts, lowering the cost of, and technical barriers to, fabricating nanoscale pores in thin solid-state membranes.
- Published
- 2020
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19. Environmental impacts of abrasive blasting of transmission towers in protected areas.
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Lashmar N, Young Berryman S, Liddell MJ, Morrison AL, Cernusak LA, Northfield TD, Goosem S, and Jennison B
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- Australia, Dust, Metals, Queensland, Occupational Exposure
- Abstract
In Australia, and other parts of the world, tower infrastructure in electricity transmission networks are nearing the end of their asset life. In changing economic, political and regulatory environments Transmission Network Service Providers are implementing new approaches to asset management and reinvestment, such as refurbishment to extend the life of existing assets, instead of replacement. As part of these refurbishment efforts, abrasive blasting and recoating is being employed to remove corrosion and extend the life of steel electricity transmission towers. New controls and procedures have been developed to manage the most likely impacts associated with the abrasive blasting of transmission towers. However, little or no data have been available on the environmental impacts of abrasive blasting or the effectiveness of management procedures currently being used to mitigate potential adverse environmental impacts.We conducted an integrated study on the impacts of abrasive blasting, which brought together on-site research; modelling; and controlled laboratory trials. The study was undertaken during a transmission tower refurbishment project within the World Heritage listed Wet Tropics Region in Queensland, Australia. Measured metal deposition around towers due to blasting, was primarily as large particles (>PM10) at 12-30 m from the tower. Soil concentrations of metals were highest under towers, with a small number of samples showing elevated zinc at 12-30 m. The presence of spent abrasive media and dust on the geofabric material used under the towers and up to 15 m from the tower base, as part of control measures used to contain the abrasive products, indicates that deposition also occurs between 0 and 12 m from the tower.The potential impacts of the abrasive blasting technique on plants and invertebrates appear to be low. Five species of tropical rainforest tree seedlings exposed to abrasive blasting dust at worst-case levels had no negative impact on physiological performance or plant health. This research will assist Transmission Network Service Providers and other operators of corroded linear infrastructure to plan and implement mitigating management actions and procedures during abrasive blasting projects and assist regulators and the community to better understand the impacts of the practice., (Copyright © 2019. Published by Elsevier Ltd.)
- Published
- 2019
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20. Casting Protocols Following BoNT-A Injections to Treat Spastic Hypertonia of the Triceps Surae in Children with Cerebral Palsy and Equinus Gait: A Randomized Controlled Trial.
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Kelly B, MacKay-Lyons M, Berryman S, Hyndman J, and Wood E
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- Botulinum Toxins, Type A administration & dosage, Cerebral Palsy complications, Child, Child, Preschool, Disability Evaluation, Equinus Deformity etiology, Female, Follow-Up Studies, Gait Disorders, Neurologic complications, Humans, Male, Muscle Spasticity etiology, Muscle, Skeletal drug effects, Neuromuscular Agents administration & dosage, Patient Satisfaction statistics & numerical data, Treatment Outcome, Casts, Surgical statistics & numerical data, Cerebral Palsy therapy, Equinus Deformity therapy, Gait Disorders, Neurologic therapy, Muscle Spasticity therapy
- Abstract
Aim: To study the effects of single versus serial casting post-Botulinum toxin A (BoNT-A) injections on hypoextensibility of triceps surae in children, 2-7 years old, with cerebral palsy and equinus gait., Methods: A randomized, stratified, parallel, two-group trial was conducted at a pediatric health center with assessments at baseline, precast, postcast and, 1-, 2-, and 6-month follow-ups. One week following BoNT-A injections into triceps surae muscle, a single below-knee cast (n = 10) or 3 serial casts (n = 10) were applied for 3 weeks. Primary outcome measure was the Modified Tardieu Scale (MTS), secondary outcome measures were Modified Ashworth Scale (MAS), GAITRite™, Gross Motor Function Measure-66 (GMFM-66), and Pediatric Evaluation of Disability Inventory (PEDI)., Results: Significant effects of time, but not group-by-time, were found for MTS R1 (P < 0.001), MTS R2 (P < 0.001), MAS (P = 0.001), GMFM-66 (P = 0.002), and PEDI (P < 0.001-0.009). One participant who received a single cast did not complete the 6-month assessment., Conclusions: Magnitudes of improvements were similar using single or serial casting. If these findings are corroborated in a larger scale study, the recommendation of a single cast may be appropriate due to its greater convenience for families and clinicians.
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- 2019
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21. Generation and characterisation of recombinant FMDV antibodies: Applications for advancing diagnostic and laboratory assays.
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Shimmon G, Kotecha A, Ren J, Asfor AS, Newman J, Berryman S, Cottam EM, Gold S, Tuthill TJ, King DP, Brocchi E, King AMQ, Owens R, Fry EE, Stuart DI, Burman A, and Jackson T
- Subjects
- Amino Acid Sequence, Animals, Antibody Specificity, Binding Sites, Antibody, Capsid immunology, Cattle, Cell Line, Enzyme-Linked Immunosorbent Assay, Foot-and-Mouth Disease immunology, Foot-and-Mouth Disease pathology, Humans, Mice, Models, Molecular, Protein Binding, Rabbits, Recombinant Fusion Proteins immunology, Swine, Antibodies, Viral genetics, Antibodies, Viral immunology, Foot-and-Mouth Disease diagnosis, Foot-and-Mouth Disease Virus immunology, Foot-and-Mouth Disease Virus isolation & purification
- Abstract
Foot-and-mouth disease (FMD) affects economically important livestock and is one of the most contagious viral diseases. The most commonly used FMD diagnostic assay is a sandwich ELISA. However, the main disadvantage of this ELISA is that it requires anti-FMD virus (FMDV) serotype-specific antibodies raised in small animals. This problem can be, in part, overcome by using anti-FMDV monoclonal antibodies (MAbs) as detecting reagents. However, the long-term use of MAbs may be problematic and they may need to be replaced. Here we have constructed chimeric antibodies (mouse/rabbit D9) and Fabs (fragment antigen-binding) (mouse/cattle D9) using the Fv (fragment variable) regions of a mouse MAb, D9 (MAb D9), which recognises type O FMDV. The mouse/rabbit D9 chimeric antibody retained the FMDV serotype-specificity of MAb D9 and performed well in a FMDV detection ELISA as well as in routine laboratory assays. Cryo-electron microscopy analysis confirmed engagement with antigenic site 1 and peptide competition studies identified the aspartic acid at residue VP1 147 as a novel component of the D9 epitope. This chimeric expression approach is a simple but effective way to preserve valuable FMDV antibodies, and has the potential for unlimited generation of antibodies and antibody fragments in recombinant systems with the concomitant positive impacts on the 3Rs (Replacement, Reduction and Refinement) principles., Competing Interests: The authors have declared that no competing interests exist.
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- 2018
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22. Irreversible inactivation of ISG15 by a viral leader protease enables alternative infection detection strategies.
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Swatek KN, Aumayr M, Pruneda JN, Visser LJ, Berryman S, Kueck AF, Geurink PP, Ovaa H, van Kuppeveld FJM, Tuthill TJ, Skern T, and Komander D
- Subjects
- Crystallography, HeLa Cells, Host-Pathogen Interactions, Humans, Models, Molecular, Protein Binding, Substrate Specificity, Cytokines chemistry, Cytokines metabolism, Endopeptidases chemistry, Endopeptidases metabolism, Ubiquitin metabolism, Ubiquitins chemistry, Ubiquitins metabolism
- Abstract
In response to viral infection, cells mount a potent inflammatory response that relies on ISG15 and ubiquitin posttranslational modifications. Many viruses use deubiquitinases and deISGylases that reverse these modifications and antagonize host signaling processes. We here reveal that the leader protease, Lb
pro , from foot-and-mouth disease virus (FMDV) targets ISG15 and to a lesser extent, ubiquitin in an unprecedented manner. Unlike canonical deISGylases that hydrolyze the isopeptide linkage after the C-terminal GlyGly motif, Lbpro cleaves the peptide bond preceding the GlyGly motif. Consequently, the GlyGly dipeptide remains attached to the substrate Lys, and cleaved ISG15 is rendered incompetent for reconjugation. A crystal structure of Lbpro bound to an engineered ISG15 suicide probe revealed the molecular basis for ISG15 proteolysis. Importantly, anti-GlyGly antibodies, developed for ubiquitin proteomics, are able to detect Lbpro cleavage products during viral infection. This opens avenues for infection detection of FMDV based on an immutable, host-derived epitope., Competing Interests: Conflict of interest statement: D.K. is part of the DUB Alliance, which includes Cancer Research Technology and FORMA Therapeutics., (Copyright © 2018 the Author(s). Published by PNAS.)- Published
- 2018
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23. The Cellular Chaperone Heat Shock Protein 90 Is Required for Foot-and-Mouth Disease Virus Capsid Precursor Processing and Assembly of Capsid Pentamers.
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Newman J, Asfor AS, Berryman S, Jackson T, Curry S, and Tuthill TJ
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- 3C Viral Proteases, Animals, Benzoquinones pharmacology, Capsid Proteins drug effects, Cell Line, Cell Survival, Cell-Free System, Cricetinae, Cysteine Endopeptidases genetics, Cysteine Endopeptidases metabolism, Foot-and-Mouth Disease metabolism, Foot-and-Mouth Disease Virus genetics, Foot-and-Mouth Disease Virus growth & development, HSP90 Heat-Shock Proteins drug effects, Isoxazoles pharmacology, Lactams, Macrocyclic pharmacology, Protein Precursors drug effects, Protein Precursors metabolism, Protein Processing, Post-Translational, RNA, Viral genetics, RNA, Viral metabolism, Resorcinols pharmacology, Viral Proteins drug effects, Viral Proteins genetics, Viral Proteins metabolism, Virus Replication, Capsid Proteins metabolism, Foot-and-Mouth Disease Virus metabolism, HSP90 Heat-Shock Proteins metabolism, Molecular Chaperones metabolism, Virus Assembly genetics, Virus Assembly physiology
- Abstract
Productive picornavirus infection requires the hijacking of host cell pathways to aid with the different stages of virus entry, synthesis of the viral polyprotein, and viral genome replication. Many picornaviruses, including foot-and-mouth disease virus (FMDV), assemble capsids via the multimerization of several copies of a single capsid precursor protein into a pentameric subunit which further encapsidates the RNA. Pentamer formation is preceded by co- and posttranslational modification of the capsid precursor (P1-2A) by viral and cellular enzymes and the subsequent rearrangement of P1-2A into a structure amenable to pentamer formation. We have developed a cell-free system to study FMDV pentamer assembly using recombinantly expressed FMDV capsid precursor and 3C protease. Using this assay, we have shown that two structurally different inhibitors of the cellular chaperone heat shock protein 90 (hsp90) impeded FMDV capsid precursor processing and subsequent pentamer formation. Treatment of FMDV permissive cells with the hsp90 inhibitor prior to infection reduced the endpoint titer by more than 10-fold while not affecting the activity of a subgenomic replicon, indicating that translation and replication of viral RNA were unaffected by the drug. IMPORTANCE FMDV of the Picornaviridae family is a pathogen of huge economic importance to the livestock industry due to its effect on the restriction of livestock movement and necessary control measures required following an outbreak. The study of FMDV capsid assembly, and picornavirus capsid assembly more generally, has tended to be focused upon the formation of capsids from pentameric intermediates or the immediate cotranslational modification of the capsid precursor protein. Here, we describe a system to analyze the early stages of FMDV pentameric capsid intermediate assembly and demonstrate a novel requirement for the cellular chaperone hsp90 in the formation of these pentameric intermediates. We show the added complexity involved for this process to occur, which could be the basis for a novel antiviral control mechanism for FMDV., (Copyright © 2018 Newman et al.)
- Published
- 2018
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24. Truncated Bovine Integrin Alpha-v/Beta-6 as a Universal Capture Ligand for FMD Diagnosis.
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Shimmon G, Wood BA, Morris A, Mioulet V, Grazioli S, Brocchi E, Berryman S, Tuthill T, King DP, Burman A, and Jackson T
- Subjects
- Animals, Cattle, Foot-and-Mouth Disease virology, Foot-and-Mouth Disease Virus immunology, Rabbits, Antibodies, Monoclonal immunology, Antibodies, Viral immunology, Antigens, Neoplasm immunology, Capsid immunology, Foot-and-Mouth Disease diagnosis, Foot-and-Mouth Disease Virus isolation & purification, Integrins immunology
- Abstract
Foot-and-mouth disease (FMD) is endemic in many regions of the world and is one of the most prevalent epizootic animal diseases. FMD affects livestock, such as cattle, sheep, goats and pigs, and causes enormous economic losses due to reduced productivity and trade restrictions. Preparedness and early diagnosis are essential for effective control of FMD. Many diagnostic assays are dependent on raising high-affinity, anti-FMD virus (FMDV) serotype-specific antibodies in small animals (rabbits and guinea pigs) that give broad virus coverage. Here we show that soluble, truncated forms of bovine αvβ6 bind FMDV in an authentic RGD and divalent cation dependent interaction and can be used as the trapping reagent in a FMDV sandwich ELISA. In addition, inclusion of FLAG or His tags facilitates simple purification without the loss of virus binding. We also provide evidence that when combined with a guinea pig polyclonal serum, or serotype-specific monoclonal antibodies, the integrin can be used to detect viruses representative of all FMDV serotypes. We also show that recombinant FMDV empty capsids, with stabilising disulphide bonds, can serve as an antigen in the ELISA and can therefore replace inactivated virus antigen as a positive control for the assay. Our results demonstrate the potential use of bovine αvβ6 and FMDV empty capsids in FMD diagnostic assays.
- Published
- 2016
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25. Foot-and-mouth disease virus replicates independently of phosphatidylinositol 4-phosphate and type III phosphatidylinositol 4-kinases.
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Berryman S, Moffat K, Harak C, Lohmann V, and Jackson T
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- Animals, Cell Line, Humans, Lipid Metabolism, 1-Phosphatidylinositol 4-Kinase metabolism, Foot-and-Mouth Disease Virus physiology, Phosphatidylinositol Phosphates metabolism, Phosphotransferases (Alcohol Group Acceptor) metabolism, Virus Replication
- Abstract
Picornaviruses form replication complexes in association with membranes in structures called replication organelles. Common themes to emerge from studies of picornavirus replication are the need for cholesterol and phosphatidylinositol 4-phosphate (PI4P). In infected cells, type III phosphatidylinositol 4-kinases (PI4KIIIs) generate elevated levels of PI4P, which is then exchanged for cholesterol at replication organelles. For the enteroviruses, replication organelles form at Golgi membranes in a process that utilizes PI4KIIIβ. Other picornaviruses, for example the cardioviruses, are believed to initiate replication at the endoplasmic reticulum and subvert PI4KIIIα to generate PI4P. Here we investigated the role of PI4KIII in foot-and-mouth disease virus (FMDV) replication. Our results showed that, in contrast to the enteroviruses and the cardioviruses, FMDV replication does not require PI4KIII (PI4KIIIα and PI4KIIIβ), and PI4P levels do not increase in FMDV-infected cells and PI4P is not seen at replication organelles. These results point to a unique requirement towards lipids at the FMDV replication membranes.
- Published
- 2016
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26. A role for endoplasmic reticulum exit sites in foot-and-mouth disease virus infection.
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Midgley R, Moffat K, Berryman S, Hawes P, Simpson J, Fullen D, Stephens DJ, Burman A, and Jackson T
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- Animals, Cell Line, Endoplasmic Reticulum metabolism, Foot-and-Mouth Disease Virus physiology, HeLa Cells, Humans, Protein Transport, Secretory Pathway, Swine, Virus Replication, Endoplasmic Reticulum ultrastructure, Endoplasmic Reticulum virology, Foot-and-Mouth Disease Virus pathogenicity, Host-Pathogen Interactions, Monomeric GTP-Binding Proteins metabolism
- Abstract
Picornaviruses replicate their genomes in association with cellular membranes. While enteroviruses are believed to utilize membranes of the early secretory pathway, the origin of the membranes used by foot-and-mouth disease virus (FMDV) for replication are unknown. Secretory-vesicle traffic through the early secretory pathway is mediated by the sequential acquisition of two distinct membrane coat complexes, COPII and COPI, and requires the coordinated actions of Sar1, Arf1 and Rab proteins. Sar1 is essential for generating COPII vesicles at endoplasmic reticulum (ER) exit sites (ERESs), while Arf1 and Rab1 are required for subsequent vesicle transport by COPI vesicles. In the present study, we have provided evidence that FMDV requires pre-Golgi membranes of the early secretory pathway for infection. Small interfering RNA depletion of Sar1 or expression of a dominant-negative (DN) mutant of Sar1a inhibited FMDV infection. In contrast, a dominant-active mutant of Sar1a, which allowed COPII vesicle formation but inhibited the secretory pathway by stabilizing COPII coats, caused major disruption to the ER-Golgi intermediate compartment (ERGIC) but did not inhibit infection. Treatment of cells with brefeldin A, or expression of DN mutants of Arf1 and Rab1a, disrupted the Golgi and enhanced FMDV infection. These results show that reagents that block the early secretory pathway at ERESs have an inhibitory effect on FMDV infection, while reagents that block the early secretory pathway immediately after ER exit but before the ERGIC and Golgi make infection more favourable. Together, these observations argue for a role for Sar1 in FMDV infection and that initial virus replication takes place on membranes that are formed at ERESs.
- Published
- 2013
- Full Text
- View/download PDF
27. Positively charged residues at the five-fold symmetry axis of cell culture-adapted foot-and-mouth disease virus permit novel receptor interactions.
- Author
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Berryman S, Clark S, Kakker NK, Silk R, Seago J, Wadsworth J, Chamberlain K, Knowles NJ, and Jackson T
- Subjects
- Animals, CHO Cells, Capsid Proteins genetics, Capsid Proteins metabolism, Cricetinae, DNA Mutational Analysis, Foot-and-Mouth Disease Virus genetics, Mutagenesis, Site-Directed, Adaptation, Biological, Foot-and-Mouth Disease Virus physiology, Receptors, Virus metabolism, Serial Passage, Viral Tropism
- Abstract
Field isolates of foot-and-mouth disease virus (FMDV) have a restricted cell tropism which is limited by the need for certain RGD-dependent integrin receptors. In contrast, cell culture-adapted viruses use heparan sulfate (HS) or other unidentified molecules as receptors to initiate infection. Here, we report several novel findings resulting from cell culture adaptation of FMDV. In cell culture, a virus with the capsid of the A/Turkey/2/2006 field isolate gained the ability to infect CHO and HS-deficient CHO cells as a result of a single glutamine (Q)-to-lysine (K) substitution at VP1-110 (VP1-(Q)110(K)). Using site-directed mutagenesis, the introduction of lysine at this same site also resulted in an acquired ability to infect CHO cells by type O and Asia-1 FMDV. However, this ability appeared to require a second positively charged residue at VP1-109. CHO cells express two RGD-binding integrins (α5β1 and αvβ5) that, although not used by FMDV, have the potential to be used as receptors; however, viruses with the VP1-(Q)110(K) substitution did not use these integrins. In contrast, the VP1-(Q)110(K) substitution appeared to result in enhanced interactions with αvβ6, which allowed a virus with KGE in place of the normal RGD integrin-binding motif to use αvβ6 as a receptor. Thus, our results confirmed the existence of nonintegrin, non-HS receptors for FMDV on CHO cells and revealed a novel, non-RGD-dependent use of αvβ6 as a receptor. The introduction of lysine at VP1-110 may allow for cell culture adaptation of FMDV by design, which may prove useful for vaccine manufacture when cell culture adaptation proves intractable.
- Published
- 2013
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28. An infectious recombinant foot-and-mouth disease virus expressing a fluorescent marker protein.
- Author
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Seago J, Juleff N, Moffat K, Berryman S, Christie JM, Charleston B, and Jackson T
- Subjects
- Animals, Cells, Cultured, Cytopathogenic Effect, Viral, Flow Cytometry, Foot-and-Mouth Disease virology, Foot-and-Mouth Disease Virus genetics, Foot-and-Mouth Disease Virus physiology, Goats, Green Fluorescent Proteins genetics, Epithelium virology, Foot-and-Mouth Disease Virus pathogenicity, Green Fluorescent Proteins metabolism, Recombination, Genetic
- Abstract
Foot-and-mouth disease virus (FMDV) is one of the most extensively studied animal pathogens because it remains a major threat to livestock economies worldwide. However, the dynamics of FMDV infection are still poorly understood. The application of reverse genetics provides the opportunity to generate molecular tools to further dissect the FMDV life cycle. Here, we have used reverse genetics to determine the capsid packaging limitations for a selected insertion site in the FMDV genome. We show that exogenous RNA up to a defined length can be stably introduced into the FMDV genome, whereas larger insertions are excised by recombination events. This led us to construct a recombinant FMDV expressing the fluorescent marker protein, termed iLOV. Characterization of infectious iLOV-FMDV showed the virus has a plaque morphology and rate of growth similar to the parental virus. In addition, we show that cells infected with iLOV-FMDV are easily differentiated by flow cytometry using the inherent fluorescence of iLOV and that cells infected with iLOV-FMDV can be monitored in real-time with fluorescence microscopy. iLOV-FMDV therefore offers a unique tool to characterize FMDV infection in vitro, and its applications for in vivo studies are discussed.
- Published
- 2013
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29. Foot-and-mouth disease virus induces autophagosomes during cell entry via a class III phosphatidylinositol 3-kinase-independent pathway.
- Author
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Berryman S, Brooks E, Burman A, Hawes P, Roberts R, Netherton C, Monaghan P, Whelband M, Cottam E, Elazar Z, Jackson T, and Wileman T
- Subjects
- Androstadienes, Animals, Autophagy-Related Protein 5, Blotting, Western, CHO Cells, Class III Phosphatidylinositol 3-Kinases metabolism, Cricetinae, Cricetulus, Green Fluorescent Proteins, Mice, Microscopy, Fluorescence, Microtubule-Associated Proteins deficiency, Wortmannin, Autophagy physiology, Foot-and-Mouth Disease Virus physiology, Microtubule-Associated Proteins metabolism, Phagosomes virology, Virus Internalization
- Abstract
Autophagy is an intracellular pathway that can contribute to innate antiviral immunity by delivering viruses to lysosomes for degradation or can be beneficial for viruses by providing specialized membranes for virus replication. Here, we show that the picornavirus foot-and-mouth disease virus (FMDV) induces the formation of autophagosomes. Induction was dependent on Atg5, involved processing of LC3 to LC3II, and led to a redistribution of LC3 from the cytosol to punctate vesicles indicative of authentic autophagosomes. Furthermore, FMDV yields were reduced in cells lacking Atg5, suggesting that autophagy may facilitate FMDV infection. However, induction of autophagosomes by FMDV appeared to differ from starvation, as the generation of LC3 punctae was not inhibited by wortmannin, implying that FMDV-induced autophagosome formation does not require the class III phosphatidylinositol 3-kinase (PI3-kinase) activity of vps34. Unlike other picornaviruses, for which there is strong evidence that autophagosome formation is linked to expression of viral nonstructural proteins, FMDV induced autophagosomes very early during infection. Furthermore, autophagosomes could be triggered by either UV-inactivated virus or empty FMDV capsids, suggesting that autophagosome formation was activated during cell entry. Unlike other picornaviruses, FMDV-induced autophagosomes did not colocalize with the viral 3A or 3D protein. In contrast, ∼50% of the autophagosomes induced by FMDV colocalized with VP1. LC3 and VP1 also colocalized with the cellular adaptor protein p62, which normally targets ubiquitinated proteins to autophagosomes. These results suggest that FMDV induces autophagosomes during cell entry to facilitate infection, but not to provide membranes for replication.
- Published
- 2012
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30. Capsid proteins from field strains of foot-and-mouth disease virus confer a pathogenic phenotype in cattle on an attenuated, cell-culture-adapted virus.
- Author
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Bøtner A, Kakker NK, Barbezange C, Berryman S, Jackson T, and Belsham GJ
- Subjects
- Animals, Capsid Proteins genetics, Cattle, Cattle Diseases, Cell Culture Techniques, Cells, Cultured, Cricetinae, Foot-and-Mouth Disease Virus genetics, Phenotype, Recombinant Proteins genetics, Recombinant Proteins metabolism, Virulence Factors genetics, Capsid Proteins metabolism, Foot-and-Mouth Disease Virus pathogenicity, Virulence Factors metabolism
- Abstract
Chimeric foot-and-mouth disease viruses (FMDVs) have been generated from plasmids containing full-length FMDV cDNAs and characterized. The parental virus cDNA was derived from the cell-culture-adapted O1Kaufbeuren B64 (O1K B64) strain. Chimeric viruses, containing capsid coding sequences derived from the O/UKG/34/2001 or A/Turkey 2/2006 field viruses, were constructed using the backbone from the O1K B64 cDNA, and viable viruses (O1K/O-UKG and O1K/A-Tur, respectively) were successfully rescued in each case. These viruses grew well in primary bovine thyroid cells but grew less efficiently in BHK cells than the rescued parental O1K B64 virus. The two chimeric viruses displayed the expected antigenicity in serotype-specific antigen ELISAs. Following inoculation of each virus into cattle, the rescued O1K B64 strain proved to be attenuated whereas, with each chimeric virus, typical clinical signs of foot-and-mouth disease were observed, which then spread to in-contact animals. Thus, the surface-exposed capsid proteins of the O1K B64 strain are responsible for its attenuation in cattle. Consequently, there is no evidence for any adaptation, acquired during cell culture, outside the capsid coding region within the O1K B64 strain that inhibits replication in cattle. These chimeric infectious cDNA plasmids provide a basis for the analysis of FMDV pathogenicity and characterization of receptor utilization in vivo.
- Published
- 2011
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31. A dominant-negative mutant of rab5 inhibits infection of cells by foot-and-mouth disease virus: implications for virus entry.
- Author
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Johns HL, Berryman S, Monaghan P, Belsham GJ, and Jackson T
- Subjects
- Animals, Cells, Cultured, Clathrin metabolism, Endosomes virology, Foot-and-Mouth Disease Virus genetics, Hydrogen-Ion Concentration, Receptors, Virus metabolism, Swine, rab5 GTP-Binding Proteins metabolism, Foot-and-Mouth Disease virology, Foot-and-Mouth Disease Virus physiology, Integrins metabolism, Virus Internalization, rab5 GTP-Binding Proteins genetics
- Abstract
Foot-and-mouth disease virus (FMDV) can use a number of different integrins (alphavbeta1, alphavbeta3, alphavbeta6, and alphavbeta8) as receptors to initiate infection. Infection mediated by alphavbeta6 is known to occur by clathrin-mediated endocytosis and is dependent on the acidic pH within endosomes. On internalization, virus is detected rapidly in early endosomes (EE) and subsequently in perinuclear recycling endosomes (PNRE), but not in late endosomal compartments. Due to the extreme sensitivity of FMDV to acidic pH, it is thought that EE can provide a pH low enough for infection to occur; however, definitive proof that infection takes place from within these compartments is still lacking. Here we have investigated the intracellular transport steps required for FMDV infection of IBRS-2 cells, which express alphavbeta8 as their FMDV receptor. These experiments confirmed that FMDV infection mediated by alphavbeta8 is also dependent on clathrin-mediate endocytosis and an acidic pH within endosomes. Also, the effect on FMDV infection of dominant-negative (DN) mutants of cellular rab proteins that regulate endosomal traffic was examined. Expression of DN rab5 reduced the number of FMDV-infected cells by 80%, while expression of DN rab4 or DN rab7 had virtually no effect on infection. Expression of DN rab11 inhibited infection by FMDV, albeit to a small extent ( approximately 35%). These results demonstrate that FMDV infection takes place predominantly from within EE and does not require virus trafficking to the late endosomal compartments. However, our results suggest that infection may not be exclusive to EE and that a small amount of infection could occur from within PNRE.
- Published
- 2009
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32. Foot-and-mouth disease virus forms a highly stable, EDTA-resistant complex with its principal receptor, integrin alphavbeta6: implications for infectiousness.
- Author
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Dicara D, Burman A, Clark S, Berryman S, Howard MJ, Hart IR, Marshall JF, and Jackson T
- Subjects
- Protein Binding, Protein Interaction Mapping, Antigens, Neoplasm metabolism, Capsid Proteins metabolism, Foot-and-Mouth Disease Virus physiology, Integrins metabolism, Receptors, Virus metabolism, Virus Attachment
- Abstract
The initial stage of foot-and-mouth disease virus (FMDV) infection is virus binding to cell surface integrins via the RGD motif in the GH loop of the VP1 capsid protein. As for all ligand/integrin interactions, the initial contact between FMDV and its integrin receptors is cation dependent and hence inhibited by EDTA. We have investigated this binding process with RGD-containing peptides derived from the VP1 capsid protein of FMDV and discovered that, upon binding, some of these peptides form highly stable, EDTA-resistant associations with integrin alphavbeta6. Peptides containing specific substitutions show that this stable binding is dependent on a helical structure immediately C terminal to the RGD and, specifically, two leucine residues at positions RGD +1 and RGD +4. These observations have a biological consequence, as we show further that stable, EDTA-resistant binding to alphavbeta6 is a property also exhibited by FMDV particles. Thus, the integrin-binding loop of FMDV appears to have evolved to form very stable complexes with the principal receptor of FMDV, integrin alphavbeta6. An ability to induce such stable complexes with its cellular receptor is likely to contribute significantly to the high infectiousness of FMDV.
- Published
- 2008
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33. Guinea pig-adapted foot-and-mouth disease virus with altered receptor recognition can productively infect a natural host.
- Author
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Núñez JI, Molina N, Baranowski E, Domingo E, Clark S, Burman A, Berryman S, Jackson T, and Sobrino F
- Subjects
- Amino Acid Motifs, Amino Acid Substitution, Animals, Animals, Suckling, Antigens, Viral chemistry, Antigens, Viral genetics, Antigens, Viral metabolism, Capsid Proteins chemistry, Capsid Proteins genetics, Cattle, Cell Line, Foot-and-Mouth Disease Virus genetics, Mice, Mutation, Receptors, Virus metabolism, Antigens, Neoplasm metabolism, Capsid Proteins metabolism, Foot-and-Mouth Disease transmission, Foot-and-Mouth Disease Virus pathogenicity, Guinea Pigs virology, Integrins metabolism, Swine virology
- Abstract
We report that adaptation to infect the guinea pig did not modify the capacity of foot-and-mouth disease virus (FMDV) to kill suckling mice and to cause an acute and transmissible disease in the pig, an important natural host for this pathogen. Adaptive amino acid replacements (I(248)-->T in 2C, Q(44)-->R in 3A, and L(147)-->P in VP1), selected upon serial passages of a type C FMDV isolated from swine (biological clone C-S8c1) in the guinea pig, were maintained after virus multiplication in swine and suckling mice. However, the adaptive replacement L(147)-->P, next to the integrin-binding RGD motif at the GH loop in VP1, abolished growth of the virus in different established cell lines and modified its antigenicity. In contrast, primary bovine thyroid cell cultures could be productively infected by viruses with replacement L(147)-->P, and this infection was inhibited by antibodies to alphavbeta6 and by an FMDV-derived RGD-containing peptide, suggesting that integrin alphavbeta6 may be used as a receptor for these mutants in the animal (porcine, guinea pig, and suckling mice) host. Substitution T(248)-->N in 2C was not detectable in C-S8c1 but was present in a low proportion of the guinea pig-adapted virus. This substitution became rapidly dominant in the viral population after the reintroduction of the guinea pig-adapted virus into pigs. These observations illustrate how the appearance of minority variant viruses in an unnatural host can result in the dominance of these viruses on reinfection of the original host species.
- Published
- 2007
- Full Text
- View/download PDF
34. Early events in integrin alphavbeta6-mediated cell entry of foot-and-mouth disease virus.
- Author
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Berryman S, Clark S, Monaghan P, and Jackson T
- Subjects
- Amino Acid Sequence, Animals, CHO Cells, Cricetinae, Endocytosis, Flow Cytometry, Foot-and-Mouth Disease Virus ultrastructure, Mice, Molecular Sequence Data, Oligopeptides, Antigens, Neoplasm physiology, Foot-and-Mouth Disease Virus physiology, Integrins physiology, Receptors, Virus physiology
- Abstract
We have shown that foot-and-mouth disease virus (FMDV) infection mediated by the integrin alphavbeta6 takes place through clathrin-dependent endocytosis but not caveolae or other endocytic pathways that depend on lipid rafts. Inhibition of clathrin-dependent endocytosis by sucrose treatment or expression of a dominant-negative version of AP180 inhibited virus entry and infection. Similarly, inhibition of endosomal acidification inhibited an early step in infection. Blocking endosomal acidification did not interfere with surface expression of alphavbeta6, virus binding to the cells, uptake of the virus into endosomes, or cytoplasmic virus replication, suggesting that the low pH within endosomes is a prerequisite for delivery of viral RNA into the cytosol. Using immunofluorescence confocal microscopy, FMDV colocalized with alphavbeta6 at the cell surface but not with the B subunit of cholera toxin, a marker for lipid rafts. At 37 degrees C, virus was rapidly taken up into the cells and colocalized with markers for early and recycling endosomes but not with a marker for lysosomes, suggesting that infection occurs from within the early or recycling endosomal compartments. This conclusion was supported by the observation that FMDV infection is not inhibited by nocodazole, a reagent that inhibits vesicular trafficking between early and late endosomes (and hence trafficking to lysosomes). The integrin alphavbeta6 was also seen to accumulate in early and recycling endosomes on virus entry, suggesting that the integrin serves not only as an attachment receptor but also to deliver the virus to the acidic endosomes. These findings are all consistent with FMDV infection proceeding via clathrin-dependent endocytosis.
- Published
- 2005
- Full Text
- View/download PDF
35. Integrin alphavbeta8 functions as a receptor for foot-and-mouth disease virus: role of the beta-chain cytodomain in integrin-mediated infection.
- Author
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Jackson T, Clark S, Berryman S, Burman A, Cambier S, Mu D, Nishimura S, and King AM
- Subjects
- Animals, Cell Line, Cricetinae, Flow Cytometry, Foot-and-Mouth Disease Virus metabolism, Humans, Integrins chemistry, Integrins genetics, Protein Conformation, Receptors, Virus chemistry, Receptors, Virus genetics, Transfection, Foot-and-Mouth Disease Virus pathogenicity, Integrins metabolism, Receptors, Virus metabolism
- Abstract
Field isolates of foot-and-mouth disease virus (FMDV) have been shown to use three alphav integrins, alphavbeta1, alphavbeta3, and alphavbeta6, as cellular receptors. Binding to the integrin is mediated by a highly conserved RGD motif located on a surface-exposed loop of VP1. The RGD tripeptide is recognized by several other members of the integrin family, which therefore have the potential to act as receptors for FMDV. Here we show that SW480 cells are made susceptible to FMDV following transfection with human beta8 cDNA and expression of alphavbeta8 at the cell surface. The involvement of alphavbeta8 in infection was confirmed by showing that virus binding and infection of the transfected cells are inhibited by RGD-containing peptides and by function-blocking monoclonal antibodies specific for either the alphavbeta8 heterodimer or the alphav chain. Similar results were obtained with a chimeric alphavbeta8 including the beta6 cytodomain (alphavbeta8/6), showing that the beta6 cytodomain can substitute efficiently for the corresponding region of beta8. In contrast, virus binding to alphavbeta6 including the beta8 cytodomain (alphavbeta6/8) was lower than that of the wild-type integrin, and this binding did not lead to infection. Further, the alphavbeta6 chimera was recognized poorly by antibodies specific for the ectodomain of alphavbeta6 and displayed a relaxed sequence-binding specificity relative to that of wild-type integrin. These data suggest that the beta6 cytodomain is important for maintaining alphavbeta6 in a conformation required for productive infection by FMDV.
- Published
- 2004
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36. The use of upper extremity anthropometrics in the clinical assessment of patients with amyotrophic lateral sclerosis.
- Author
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Kasarskis EJ, Berryman S, English T, Nyland J, Vanderleest JG, Schneider A, Berger R, and McClain C
- Subjects
- Adult, Aged, Amyotrophic Lateral Sclerosis drug therapy, Ciliary Neurotrophic Factor, Double-Blind Method, Feasibility Studies, Female, Humans, Lung physiopathology, Male, Middle Aged, Muscles diagnostic imaging, Muscles physiopathology, Nerve Tissue Proteins therapeutic use, Tomography, X-Ray Computed, Torque, Amyotrophic Lateral Sclerosis pathology, Amyotrophic Lateral Sclerosis physiopathology, Anthropometry, Arm pathology
- Abstract
We evaluated the feasibility of using upper extremity anthropometrics to monitor the clinical status of 18 patients with amyotrophic lateral sclerosis (ALS). The bone-free arm muscle area (AMA) was computed using measurement of triceps skinfold thickness and the mid-upper arm circumference according to published formulae. The AMA correlated significantly with body mass, isokinetic muscle force generation, cross-sectional muscle area on computerized tomography scanning, and pulmonary functions including forced vital capacity and maximal voluntary ventilation. Serial determinations of AMA demonstrated a decline in 10 of 13 patients over 6 months. We pilot tested the use of AMA in a clinical trial of ciliary neurotrophic factor (CNTF) in the treatment of ALS. The AMA progressively decreased by 13%, 15%, and 30% in ALS patients treated with 0 microg CNTF/kg, 15 microg CNTF/kg, and 30/microg CNTF/kg, respectively, over a 9-month treatment period. We conclude that measurement of AMA provides a simple, inexpensive method to monitor the progression of muscle atrophy in ALS patients. The technique does not require effort on the part of the patient and as such, appears to have potential utility as an outcome measure in clinical drug trials.
- Published
- 1997
- Full Text
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37. Low-iodine tube-feeding diet for iodine-131 scanning and therapy.
- Author
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Ain KB, Dewitt PA, Gardner TG, and Berryman SW
- Subjects
- Adenocarcinoma therapy, Adult, Aged, Enteral Nutrition, Humans, Male, Middle Aged, Neoplasm Recurrence, Local, Nutritional Requirements, Radionuclide Imaging, Thyroid Neoplasms therapy, Thyroidectomy, Adenocarcinoma diagnostic imaging, Adenocarcinoma radiotherapy, Food, Formulated, Iodine administration & dosage, Iodine Radioisotopes therapeutic use, Thyroid Neoplasms diagnostic imaging, Thyroid Neoplasms radiotherapy
- Abstract
Optimal preparation for I-131 scanning and therapy of differentiated thyroid carcinoma requires use of a low iodine diet (< or = 50 micrograms iodine per day) to enhance the delivery of I-131 to thyroid remnants or carcinoma. Because there are no commercial low-iodine tube-feeding diets, the authors formulated and tested a suitable diet that is appropriate for home preparation using commonly available ingredients. A patient was placed on this diet in anticipation of radioiodine therapy after surgical resection of a thyroid carcinoma recurrence in his neck. This patient reduced his 24-hour urinary iodine excretion from 378 micrograms iodine to 13 micrograms iodine after 15 days on the diet. Analysis of the diet reveals that it is nutritionally complete and delivers only 18.2 micrograms of iodine for each 1000 kcal. This diet should improve I-131 therapy of differentiated thyroid carcinoma in patients requiring tube feedings.
- Published
- 1994
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38. Evaluation of the co-mutagenicity of ethanol and delta 9-tetrahydrocannabinol with Trenimon.
- Author
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Berryman SH, Anderson RA Jr, Weis J, and Bartke A
- Subjects
- Analysis of Variance, Animals, Drug Interactions, Female, Fertility, Male, Mice, Mice, Inbred Strains, Mutagenesis, Mutagenicity Tests, Organ Size, Pregnancy, Reference Values, Seminal Vesicles anatomy & histology, Seminal Vesicles drug effects, Testis anatomy & histology, Testis drug effects, Dronabinol toxicity, Ethanol toxicity, Genes, Lethal drug effects, Mutagens toxicity, Triaziquone toxicity
- Abstract
The mutagenic potential of chronic treatments of male CF-1 mice with ethanol and delta 9-tetrahydrocannibinol (THC), and their comutagenic potential with a known mutagenic agent, Trenimon, were examined. This was accomplished by measuring the frequency of dominant lethal mutations arising from mating of treated males with nontreated females. Adult male mice were treated with 5% (v/v) ethanol as part of a liquid diet (28% ethanol-derived calories) for five weeks; 10 mg/kg body weight (p.o.) THC every two days for five weeks; a single injection of Trenimon (0.125 mg/kg, i.p.) on day 28 of diet treatment; and all combinations of treatments. The control group was pair-fed a liquid diet in which isocaloric sucrose replaced ethanol; these males were also given sesame oil (vehicle for THC) and saline (vehicle for Trenimon) on the same schedule as that for the treated males. Neither body weights nor hematocrits were adversely affected by any treatment. Both ethanol and Trenimon treatments resulted in a small (8-9%; p less than 0.05) decrease in testicular weight. The effect of combined treatment with ethanol and Trenimon was roughly additive. Treatment with THC had no effect on testicular weight. Seminal vesicle weights were not affected by any treatment. Treatments were without significant effect on fertility, as measured by the frequency of males producing pregnancies. Ethanol and Trenimon treatments produced approximately 3- and 7-fold increases, respectively in the frequencies of preimplantational loss over that seen for the control group (7.3%), resulting in significant ethanol and Trenimon effects (p less than 0.001). No interactive effects of ethanol and Trenimon treatments were noted. Frequencies of dead fetuses per pregnancy in the ethanol- and Trenimon-treated groups were increased approximately 2.5- and 4-fold, respectively, over the control value of approximately 16%. However, the effect of combined treatments was not greater than that due to Trenimon alone, resulting in Trenimon and ethanol effects (p less than 0.001) and ethanol-Trenimon interaction (p less than 0.001). The calculated mutation index resulting from each treatment yielded significant (p less than 0.001) ethanol- and Trenimon-induced effects. In contrast to effects of ethanol and Trenimon treatments, THC, given alone, or in combination with ethanol and/or Trenimon, had no effect on either preimplantational loss, fetal mortality or the resulting mutation index. The data suggest that chronic ethanol treatment, at levels resulting in minimal fertility impairment, increases the frequency of dominant lethal mutations. In contrast, chronic treatment with THC, as administered in the present study, appears to be without effect.(ABSTRACT TRUNCATED AT 400 WORDS)
- Published
- 1992
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39. Testosterone production by the prepubertal mouse testis is not depressed by ethanol.
- Author
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Anderson RA Jr, Phillips JF, Berryman SH, and Zaneveld LJ
- Subjects
- Aging metabolism, Androstenedione blood, Androstenedione metabolism, Animals, Chorionic Gonadotropin pharmacology, Dihydrotestosterone blood, Dihydrotestosterone metabolism, Ethanol blood, Female, In Vitro Techniques, Leydig Cells drug effects, Leydig Cells metabolism, Male, Mice, Mice, Inbred Strains, Pregnancy, Protein Biosynthesis, Sexual Maturation drug effects, Testis drug effects, Ethanol pharmacology, Testis metabolism, Testosterone biosynthesis
- Abstract
The purpose of the present study was to evaluate the sensitivity of testicular steroidogenesis during pubertal development to inhibition by ethanol. In vivo and in vitro human chorionic gonadotropin (hCG)-stimulated steroidogenesis were examined in CFW mice as a function of age. Plasma androstenedione, testosterone, and dihydrotestosterone (DHT) increased from ages 23 to 60 days in control mice. Acute ethanol treatment (3 g/kg) yielded static levels of androstenedione (0.45 +/- 0.03 ng/mL), testosterone (6.4 +/- 0.56 ng/mL), and DHT (2.3 +/- 0.18 ng/mL) from ages 23 to 60 days, 30 to 60 days, and 35 to 60 days, respectively, resulting in reduction of plasma androstenedione, testosterone, and DHT (P less than 0.05) relative to control values, but not until ages 35, 50, and 45 days, respectively. A similar insensitivity of the prepubertal testis to ethanol was seen in vitro. Inhibition of in vitro androstenedione and testosterone accumulation was seen only after ages 26 and 45 days, respectively. The data indicate that testosterone production by the pubertal testis is relatively insensitive to direct inhibition by ethanol. Previous studies have shown that chronic ethanol treatment of adolescent mice delays testicular maturation. The present study suggests that if chronic ethanol-induced delayed testicular development were due to impaired steroidogenesis, such impairment would be secondary to reduced gonadotropin stimulation and/or due to a chronic, rather than an acute, effect of ethanol.
- Published
- 1989
- Full Text
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40. Ethanol-induced delayed male puberty in mice is not due to impaired Leydig cell function.
- Author
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Anderson RA Jr, Phillips JF, Berryman SH, and Zaneveld LJ
- Subjects
- Aging metabolism, Androstenedione biosynthesis, Animals, Chorionic Gonadotropin pharmacology, Dihydrotestosterone metabolism, Ethanol blood, Female, In Vitro Techniques, Leydig Cells drug effects, Male, Mice, Mice, Inbred Strains, Organ Size drug effects, Pregnancy, Proteins metabolism, Testis drug effects, Testis growth & development, Testis metabolism, Testosterone biosynthesis, Ethanol toxicity, Leydig Cells physiology, Sexual Maturation drug effects
- Abstract
The present study was performed to evaluate the involvement of reduced testosterone in ethanol-induced impairment of male reproductive tract development. In vivo and in vitro gonadotropin (hCG)-stimulated steroidogenesis were examined in CFW mice as a function of chronic ethanol treatment during pubertal development. Chronic ethanol treatment from ages 20 to 49 days impaired testicular growth from ages 35 days (29 +/- 2 mg vs 37 +/- 2 mg for pair-fed controls) to 50 days (42 +/- 2 mg vs 63 +/- 2 mg for pair-fed controls). Consistent with a reduction in testicular weight, testicular content of androstenedione, testosterone, and dihydrotestosterone (DHT) was depressed in ethanol-treated mice. At age 50 days, the content (expressed as pg/testis) of androstenedione, testosterone, and DHT was reduced in ethanol-treated animals by 49%, 31%, and 38%, respectively, as compared to that of their respective controls. However, no difference in plasma (ng/mL) or testicular (pg/mg protein) concentrations of steroids was observed. Except for the DHT response at ages 35 to 40 days, neither in vivo nor in vitro steroidogenesis was impaired by chronic ethanol treatment at ages 26 to 50 days; similarly, the acute ethanol effect on steroidogenesis was unaffected. However, an adaptive increase (54%-173%) in the in vivo testosterone response to hCG was seen at ages 26 to 40 days. The data indicate that 1) chronic ethanol treatment does not impair gonadotropin-stimulated steroidogenesis or result in tolerance to acute ethanol effects on steroidogenesis in older animals; and 2) ethanol-induced reduction in testosterone is not a likely mechanism for delayed sexual maturation.
- Published
- 1989
- Full Text
- View/download PDF
41. Biochemical and structural evidence for ethanol-induced impairment of testicular development: apparent lack of Leydig cell involvement.
- Author
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Anderson RA Jr, Berryman SH, Phillips JF, Feathergill KA, Zaneveld LJ, and Russell LD
- Subjects
- Administration, Oral, Animals, Ethanol blood, Leydig Cells drug effects, Male, Mice, Oxidoreductases metabolism, Sexual Maturation, Testis enzymology, Testis growth & development, Testis pathology, Ethanol toxicity, Testis drug effects
- Abstract
The present study was conducted to provide biochemical and morphological evidence for ethanol-induced impairment of testicular development. The specific activities of testicular postmeiotic enzyme markers--sorbitol dehydrogenase (SDH), lactate dehydrogenase (LDH), and alpha-glycerophosphate dehydrogenase (GDH)--increased with age in CFW mice from ages 23 to 60 days, providing a biochemical measure of testicular development during puberty. Chronic ethanol treatment via liquid diets from ages 20 to 55 days resulted in decreased activities of SDH and LDH at ages 40 and 44 days, and of GDH at ages 34, 40, and 44 days. These decreases were consistent with an arrest in the developmental increase in SDH, LDH, and GDH at ages 31 +/- 0.6, 31 +/- 2.6, and 24 +/- 0.5 days, respectively. After 29 days of ethanol treatment (age 50 days), testicular weights, epididymal sperm content, and sperm motility were reduced, relative to controls, by 37, 83, and 60%, respectively (p less than 0.05). Epididymal weights were unaffected. Light microscopic evaluation of testes revealed disorganization of spermatogenesis, germ cell degeneration, decreased tubular luminal diameter, and vacuolation of Sertoli cells in ethanol-treated mice at age 50 days. Electron microscopic analysis showed that germ cell degeneration was not restricted to a specific cell type. Stage IX-XI tubules were observed in which spermatids had been retained and underwent phagocytosis within the Sertoli cell. Sertoli cells showed evidence of atypical nuclear invaginations. Sertoli cells underwent degenerative changes and were sloughed into the rete testis. However, relative Leydig cell size, as well as fractional volume occupied by the nucleus, mitochondria, and endoplasmic reticulum were unaffected by ethanol. The data (1) confirm previous findings suggesting ethanol-induced delayed testicular development; (2) suggest that certain aspects of testicular development are arrested relatively early in ethanol treatment (4-11 days); and (3) indicate that the Sertoli cell, rather than the Leydig cell, is the primary target with regard to the deleterious effect of chronic ethanol treatment on testicular maturation.
- Published
- 1989
- Full Text
- View/download PDF
42. Anchorage and growth regulation in normal and virus-transformed cells.
- Author
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Stoker M, O'Neill C, Berryman S, and Waxman V
- Subjects
- Animals, Cell Transformation, Neoplastic, Cricetinae, Culture Techniques, DNA biosynthesis, DNA, Neoplasm biosynthesis, Neoplasms, Experimental pathology
- Published
- 1968
- Full Text
- View/download PDF
43. Deoxyribonucleoside triphosphate pools in synchronized and drug-inhibited L 929 cells.
- Author
-
Adams RL, Berryman S, and Thomson A
- Subjects
- Adenine Nucleotides metabolism, Aminopterin pharmacology, Animals, Autoradiography, Cell Line cytology, Cell Line drug effects, Cell Line growth & development, Cell Nucleus metabolism, Cytosine Nucleotides metabolism, DNA biosynthesis, Deoxyribonucleotides metabolism, Depression, Chemical, Guanine Nucleotides metabolism, Hydroxyurea pharmacology, Kinetics, Mice, Stimulation, Chemical, Thymidine pharmacology, Thymine Nucleotides metabolism, Time Factors, Tritium, Cell Line metabolism, Nucleotides metabolism
- Published
- 1971
- Full Text
- View/download PDF
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