64 results on '"Berg JN"'
Search Results
2. De novo and biallelic DEAF1 variants cause a phenotypic spectrum
- Author
-
Nabais Sá, MJ, Jensik, PJ, McGee, SR, Parker, MJ, Lahiri, N, McNeil, EP, Kroes, HY, Hagerman, RJ, Harrison, RE, Montgomery, T, Splitt, M, Palmer, EE, Sachdev, RK, Mefford, HC, Scott, AA, Martinez-Agosto, JA, Lorenz, R, Orenstein, N, Berg, JN, Amiel, J, Heron, D, Keren, B, Cobben, JM, Menke, LA, Marco, EJ, Graham, JM, Pierson, TM, Karimiani, EG, Maroofian, R, Manzini, MC, Cauley, ES, Colombo, R, Odent, S, Dubourg, C, Phornphutkul, C, de Brouwer, APM, de Vries, BBA, Vulto-vanSilfhout, AT, Nabais Sá, MJ, Jensik, PJ, McGee, SR, Parker, MJ, Lahiri, N, McNeil, EP, Kroes, HY, Hagerman, RJ, Harrison, RE, Montgomery, T, Splitt, M, Palmer, EE, Sachdev, RK, Mefford, HC, Scott, AA, Martinez-Agosto, JA, Lorenz, R, Orenstein, N, Berg, JN, Amiel, J, Heron, D, Keren, B, Cobben, JM, Menke, LA, Marco, EJ, Graham, JM, Pierson, TM, Karimiani, EG, Maroofian, R, Manzini, MC, Cauley, ES, Colombo, R, Odent, S, Dubourg, C, Phornphutkul, C, de Brouwer, APM, de Vries, BBA, and Vulto-vanSilfhout, AT
- Abstract
Purpose: To investigate the effect of different DEAF1 variants on the phenotype of patients with autosomal dominant and recessive inheritance patterns and on DEAF1 activity in vitro. Methods: We assembled a cohort of 23 patients with de novo and biallelic DEAF1 variants, described the genotype–phenotype correlation, and investigated the differential effect of de novo and recessive variants on transcription assays using DEAF1 and Eif4g3 promoter luciferase constructs. Results: The proportion of the most prevalent phenotypic features, including intellectual disability, speech delay, motor delay, autism, sleep disturbances, and a high pain threshold, were not significantly different in patients with biallelic and pathogenic de novo DEAF1 variants. However, microcephaly was exclusively observed in patients with recessive variants (p < 0.0001). Conclusion: We propose that different variants in the DEAF1 gene result in a phenotypic spectrum centered around neurodevelopmental delay. While a pathogenic de novo dominant variant would also incapacitate the product of the wild-type allele and result in a dominant-negative effect, a combination of two recessive variants would result in a partial loss of function. Because the clinical picture can be nonspecific, detailed phenotype information, segregation, and functional analysis are fundamental to determine the pathogenicity of novel variants and to improve the care of these patients.
- Published
- 2019
3. MSR1 repeats modulate gene expression and affect risk of breast and prostate cancer
- Author
-
Rose, AM, Krishan, A, Chakarova, CF, Moya, L, Chambers, SK, Hollands, M, Illingworth, JC, Williams, SMG, McCabe, HE, Shah, AZ, Palmer, CNA, Chakravarti, A, Berg, JN, Batra, J, Bhattacharya, SS, Rose, AM, Krishan, A, Chakarova, CF, Moya, L, Chambers, SK, Hollands, M, Illingworth, JC, Williams, SMG, McCabe, HE, Shah, AZ, Palmer, CNA, Chakravarti, A, Berg, JN, Batra, J, and Bhattacharya, SS
- Abstract
© The Author(s) 2018. Published by Oxford University Press on behalf of the European Society for Medical Oncology. All rights reserved. Background: MSR1 repeats are a 36-38 bp minisatellite element that have recently been implicated in the regulation of gene expression, through copy number variation (CNV). Patients and methods: Bioinformatic and experimental methods were used to assess the distribution of MSR1 across the genome, evaluate the regulatory potential of such elements and explore the role of MSR1 elements in cancer, particularly non-familial breast cancer and prostate cancer. Results: MSR1s are predominately located at chromosome 19 and are functionally enriched in regulatory regions of the genome, particularly regions implicated in short-range regulatory activities (H3K27ac, H3K4me1 and H3K4me3). MSR1-regulated genes were found to have specific molecular roles, such as serine-protease activity (P=4.80×10-7) and ion channel activity (P=2.7×10-4). The kallikrein locus was found to contain a large number of MSR1 clusters, and at least six of these showed CNV. An MSR1 cluster was identified within KLK14, with 9 and 11 copies being normal variants. A significant association with the 9-copy allele and non-familial breast cancer was found in two independent populations (P=0.004; P=0.03). In the white British population, the minor allele conferred an increased risk of 1.21-3.51 times for all non-familial disease, or 1.7-5.3 times in earlyonset disease. The 9-copy allele was also found to be associated with increased risk of prostate cancer in an independent population (odds ratio=1.27-1.56; P=0.009). Conclusions: MSR1 repeats act as molecular switches that modulate gene expression. It is likely that CNV of MSR1 will affect risk of development of various forms of cancer, including that of breast and prostate. The MSR1 cluster at KLK14 represents the strongest risk factor identified to date in non-familial breast cancer and a significant risk factor for prostate c
- Published
- 2018
4. Abstract P3-12-11: Combining Genotype at Low Penetrance Breast Cancer Loci with Family History Risk Leads to Significant Risk Reclassification
- Author
-
Martin, AJ, primary, White, S, additional, Onen, A, additional, Gale, J, additional, Dunlop, J, additional, Baker, L, additional, Thompson, AM, additional, Pharoah, PDP, additional, and Berg, JN., additional
- Published
- 2010
- Full Text
- View/download PDF
5. The effects of gender-affirming testosterone therapy in transgender men on the development of acne, acne severity and the relationship with clinical parameters: a three-year follow-up study.
- Author
-
Madsen MC, Berg JN, Fisher AD, T'Sjoen G, Rustemeyer T, Den Heijer M, Wiepjes CM, and Dreijerink KMA
- Subjects
- Humans, Male, Adult, Follow-Up Studies, Young Adult, Prospective Studies, Adolescent, Risk Factors, Prevalence, Female, Body Mass Index, Age Factors, Sex Reassignment Procedures adverse effects, Smoking adverse effects, Smoking epidemiology, Acne Vulgaris drug therapy, Acne Vulgaris chemically induced, Acne Vulgaris epidemiology, Testosterone blood, Testosterone adverse effects, Testosterone therapeutic use, Transgender Persons, Severity of Illness Index
- Abstract
Acne can result from increased testosterone concentrations after gender-affirming masculinizing testosterone therapy (GATT) initiation. The aim of this study was to determine the prevalence and risk factors of acne and acne severity in transgender individuals while receiving GATT. A prospective multicenter follow-up study (2010-2019) was performed to assess self-reported acne and acne severity, and define risk factors for acne in transgender men during the first three years after initiation of GATT (n=323). Investigated risk factors included: age at initiation of GATT, body mass index (BMI), type of testosterone administration, use of lynestrenol, alcohol use, smoking and serum testosterone concentrations during therapy. The prevalence of moderate/severe acne increased from 11.8% to 39.1% after one year of GATT. Multivariate analyses showed BMI >25 kg/m2 (relative risk [RR]: 1.46; 95% confidence interval [CI]: 1.18-1.80), age: 18-25 years (RR: 1.98; 95% CI: 1.19-3.33), testosterone concentration >10 nmol/L (RR: 1.91; 95%CI: 1.28-2.84) and the presence of acne at baseline (RR: 1.82; 95%CI: 1.47-2.25) to be risk factors for development of moderate/severe acne. Acne is a common side effect of GATT. Risk factors that influence the occurrence of moderate to severe acne in testosterone-treated transgender men are high BMI, younger age at initiation of GATT and testosterone concentrations within or above the target range. These observations could be taken into account when counselling transgender men starting GATT.
- Published
- 2024
- Full Text
- View/download PDF
6. De novo and biallelic DEAF1 variants cause a phenotypic spectrum.
- Author
-
Nabais Sá MJ, Jensik PJ, McGee SR, Parker MJ, Lahiri N, McNeil EP, Kroes HY, Hagerman RJ, Harrison RE, Montgomery T, Splitt M, Palmer EE, Sachdev RK, Mefford HC, Scott AA, Martinez-Agosto JA, Lorenz R, Orenstein N, Berg JN, Amiel J, Heron D, Keren B, Cobben JM, Menke LA, Marco EJ, Graham JM Jr, Pierson TM, Karimiani EG, Maroofian R, Manzini MC, Cauley ES, Colombo R, Odent S, Dubourg C, Phornphutkul C, de Brouwer APM, de Vries BBA, and Vulto-vanSilfhout AT
- Subjects
- Adolescent, Adult, Alleles, Autistic Disorder genetics, Autistic Disorder pathology, Child, Child, Preschool, Developmental Disabilities pathology, Exome genetics, Female, Genetic Association Studies, Humans, Intellectual Disability pathology, Language Development Disorders genetics, Language Development Disorders pathology, Male, Microcephaly pathology, Mutation, Missense genetics, Young Adult, DNA-Binding Proteins genetics, Developmental Disabilities genetics, Intellectual Disability genetics, Microcephaly genetics, Transcription Factors genetics
- Abstract
Purpose: To investigate the effect of different DEAF1 variants on the phenotype of patients with autosomal dominant and recessive inheritance patterns and on DEAF1 activity in vitro., Methods: We assembled a cohort of 23 patients with de novo and biallelic DEAF1 variants, described the genotype-phenotype correlation, and investigated the differential effect of de novo and recessive variants on transcription assays using DEAF1 and Eif4g3 promoter luciferase constructs., Results: The proportion of the most prevalent phenotypic features, including intellectual disability, speech delay, motor delay, autism, sleep disturbances, and a high pain threshold, were not significantly different in patients with biallelic and pathogenic de novo DEAF1 variants. However, microcephaly was exclusively observed in patients with recessive variants (p < 0.0001)., Conclusion: We propose that different variants in the DEAF1 gene result in a phenotypic spectrum centered around neurodevelopmental delay. While a pathogenic de novo dominant variant would also incapacitate the product of the wild-type allele and result in a dominant-negative effect, a combination of two recessive variants would result in a partial loss of function. Because the clinical picture can be nonspecific, detailed phenotype information, segregation, and functional analysis are fundamental to determine the pathogenicity of novel variants and to improve the care of these patients.
- Published
- 2019
- Full Text
- View/download PDF
7. Cerebrofaciothoracic dysplasia: Four new patients with a recurrent TMCO1 pathogenic variant.
- Author
-
Michael Yates T, Ng OH, Offiah AC, Willoughby J, Berg JN, and Johnson DS
- Subjects
- Abnormalities, Multiple diagnostic imaging, Abnormalities, Multiple physiopathology, Adolescent, Adult, Consanguinity, Female, Genetic Predisposition to Disease, Homozygote, Humans, Intellectual Disability diagnostic imaging, Intellectual Disability physiopathology, Male, Musculoskeletal Abnormalities diagnostic imaging, Musculoskeletal Abnormalities physiopathology, Mutation genetics, Phenotype, Skeleton abnormalities, Skeleton diagnostic imaging, Tomography, X-Ray Computed, Tooth Abnormalities diagnostic imaging, Tooth Abnormalities genetics, Tooth Abnormalities physiopathology, Abnormalities, Multiple genetics, Calcium Channels genetics, Intellectual Disability genetics, Musculoskeletal Abnormalities genetics
- Abstract
Biallelic loss of function variants in the TMCO1 gene have been previously demonstrated to result in cerebrofaciothoracic dysplasia (CFTD; MIM #213980). The phenotype of this condition includes severe intellectual disability, as well as distinctive craniofacial features, including brachycephaly, synophrys, arched eyebrows, "cupid's bow" upper lip, and microdontia. In addition, nonspecific skeletal anomalies are common, including bifid ribs, scoliosis, and spinal fusion. Only 19 molecularly confirmed patients have been previously described. Here, we present four patients with CFTD, including three brothers from a Pakistani background and an additional unrelated white Scottish patient. All share the characteristic craniofacial appearance, with severe intellectual disability and skeletal abnormalities. We further define the phenotype with comparison to the published literature, and present images to define the dysmorphic features in a previously unreported ethnic group. All of our patient series are homozygous for the same c.292_293del (p.Ser98*) TMCO1 pathogenic variant, which has been previously reported only in an isolated Amish population. Thus we provide evidence that CFTD may be more common than previously thought. The patients presented here further delineate the phenotypic spectrum of CFTD and provide evidence for a recurrent pathogenic variant in TMCO1., (© 2018 Wiley Periodicals, Inc.)
- Published
- 2019
- Full Text
- View/download PDF
8. Pathogenicity and Penetrance of Germline SDHA Variants in Pheochromocytoma and Paraganglioma (PPGL).
- Author
-
Maniam P, Zhou K, Lonergan M, Berg JN, Goudie DR, and Newey PJ
- Abstract
Germline SDHA mutations are reported in a minority of pheochromocytoma/paraganglioma (PPGL) cases but are associated with an increased risk of malignancy, leading some to advocate cascade genetic testing and surveillance screening of "at-risk" first-degree relatives. However, such approaches rely on accurate estimates of variant pathogenicity and disease penetrance, which may have been subject to ascertainment and reporting biases, although the recent provision of large population-based DNA sequence data sets may provide a potentially unbiased resource to aid variant interpretation. Thus, the aim of the current study was to evaluate the pathogenicity and penetrance of SDHA variants reported in literature-based PPGL cases by comparing their frequency to those occurring in the Genome Aggregation Database (GnomAD) data set, which provides high-quality DNA sequence data on 138,632 individuals. In total, 39 different missense or loss-of-function (LOF) SDHA variants were identified in 95 PPGL index cases. Notably, many of the PPGL-associated SDHA alleles were observed at an unexpectedly high frequency in the GnomAD cohort, with ~1% and ~0.1% of the background population harboring a rare missense or LOF variant, respectively. Although the pathogenicity of several SDHA alleles was supported by significant enrichment in PPGL cases relative to GnomAD controls, calculations of disease penetrance based on allele frequencies in the respective cohorts resulted in much lower estimates than previously reported, ranging from 0.1% to 4.9%. Thus, although this study provides support for the etiological role of SDHA in PPGL formation, it suggests that most variant carriers will not manifest PPGLs and are unlikely to benefit from periodic surveillance screening.
- Published
- 2018
- Full Text
- View/download PDF
9. MSR1 repeats modulate gene expression and affect risk of breast and prostate cancer.
- Author
-
Rose AM, Krishan A, Chakarova CF, Moya L, Chambers SK, Hollands M, Illingworth JC, Williams SMG, McCabe HE, Shah AZ, Palmer CNA, Chakravarti A, Berg JN, Batra J, and Bhattacharya SS
- Subjects
- Age of Onset, Breast Neoplasms pathology, Case-Control Studies, Computational Biology, DNA Copy Number Variations, Female, Germ-Line Mutation, Histones genetics, Humans, Kallikreins genetics, Male, Middle Aged, Multigene Family genetics, Prostatic Neoplasms pathology, Risk Assessment methods, Breast Neoplasms genetics, Gene Expression Regulation, Neoplastic genetics, Genetic Predisposition to Disease, Minisatellite Repeats genetics, Prostatic Neoplasms genetics
- Abstract
Background: MSR1 repeats are a 36-38 bp minisatellite element that have recently been implicated in the regulation of gene expression, through copy number variation (CNV)., Patients and Methods: Bioinformatic and experimental methods were used to assess the distribution of MSR1 across the genome, evaluate the regulatory potential of such elements and explore the role of MSR1 elements in cancer, particularly non-familial breast cancer and prostate cancer., Results: MSR1s are predominately located at chromosome 19 and are functionally enriched in regulatory regions of the genome, particularly regions implicated in short-range regulatory activities (H3K27ac, H3K4me1 and H3K4me3). MSR1-regulated genes were found to have specific molecular roles, such as serine-protease activity (P = 4.80 × 10-7) and ion channel activity (P = 2.7 × 10-4). The kallikrein locus was found to contain a large number of MSR1 clusters, and at least six of these showed CNV. An MSR1 cluster was identified within KLK14, with 9 and 11 copies being normal variants. A significant association with the 9-copy allele and non-familial breast cancer was found in two independent populations (P = 0.004; P = 0.03). In the white British population, the minor allele conferred an increased risk of 1.21-3.51 times for all non-familial disease, or 1.7-5.3 times in early-onset disease. The 9-copy allele was also found to be associated with increased risk of prostate cancer in an independent population (odds ratio = 1.27-1.56; P =0.009)., Conclusions: MSR1 repeats act as molecular switches that modulate gene expression. It is likely that CNV of MSR1 will affect risk of development of various forms of cancer, including that of breast and prostate. The MSR1 cluster at KLK14 represents the strongest risk factor identified to date in non-familial breast cancer and a significant risk factor for prostate cancer. Analysis of MSR1 genotype will allow development of precise stratification of disease risk and provide a novel target for therapeutic agents.
- Published
- 2018
- Full Text
- View/download PDF
10. Assessing the effectiveness of NICE criteria for stratifying breast cancer risk in a UK cohort.
- Author
-
Littlejohn LA, Gibbs J, Jordan LB, Miedzybrodzka ZH, Bell C, Goudie D, Dunlop J, and Berg JN
- Subjects
- Adult, BRCA1 Protein genetics, BRCA2 Protein genetics, Breast Neoplasms genetics, Female, Genetic Predisposition to Disease, Humans, Middle Aged, Penetrance, United Kingdom, Breast Neoplasms diagnosis, Genetic Testing standards, Practice Guidelines as Topic
- Abstract
Breast cancer risk is a common indication for referral to clinical genetics services. UK National Institute of Health and Care Excellence (NICE) guidelines use family history (FH) to stratify by 10-year risk of breast cancer from age 40. Patients are stratified into population risk (PR, 10-year risk <3%), moderate (MR, 3-8%) and high risk (HR, >8%). Women at increased risk are offered screening at or prior to age 40. To assess the clinical effectiveness of current risk stratification, FH data were obtained for all unaffected women with a FH of breast cancer aged <50, referred to cancer genetics from 2000-2010. Patients were risk stratified by NICE criteria, identifying patients who subsequently developed breast cancer. A total of 1409 women had 15,414 patient years of follow-up. Thirty invasive breast cancers developed, 13 in MR and 13 in HR women. Kaplan-Meier analysis demonstrated no significant difference in the rate of breast cancer development between PR and MR women from ages 40 to 49 (Log rank p = 0.431). There was a significant difference between ages 40 and 49 years between PR and HR women (p = 0.036), but not on exclusion of BRCA mutation carriers (p = 0.136). NICE absolute 10-year risk thresholds between ages 40 and 49 were not met in any risk group, when risk was estimated using the guidelines (PR = 0.82%, MR = 1.68%, HR = 3.56%). Our data suggest that improved criteria are required for risk assessment prior to age 50 and screening resources may be best focussed on those with highly penetrant mutations in cancer risk genes.
- Published
- 2018
- Full Text
- View/download PDF
11. Utility of Population-Level DNA Sequence Data in the Diagnosis of Hereditary Endocrine Disease.
- Author
-
Newey PJ, Berg JN, Zhou K, Palmer CNA, and Thakker RV
- Abstract
Context: Genetic testing is increasingly used for clinical diagnosis, although variant interpretation presents a major challenge because of high background rates of rare coding-region variation, which may contribute to inaccurate estimates of variant pathogenicity and disease penetrance., Objective: To use the Exome Aggregation Consortium (ExAC) data set to determine the background population frequencies of rare germline coding-region variants in genes associated with hereditary endocrine disease and to evaluate the clinical utility of these data., Design Setting Participants: Cumulative frequencies of rare nonsynonymous single-nucleotide variants were established for 38 endocrine disease genes in 60,706 unrelated control individuals. The utility of gene-level and variant-level metrics of tolerability was assessed, and the pathogenicity and penetrance of germline variants previously associated with endocrine disease evaluated., Results: The frequency of rare coding-region variants differed markedly between genes and was correlated with the degree of evolutionary conservation. Genes associated with dominant monogenic endocrine disorders typically harbored fewer rare missense and/or loss-of-function variants than expected. In silico variant prediction tools demonstrated low clinical specificity. The frequency of several endocrine disease‒associated variants in the ExAC cohort far exceeded estimates of disease prevalence, indicating either misclassification or overestimation of disease penetrance. Finally, we illustrate how rare variant frequencies may be used to anticipate expected rates of background rare variation when performing disease-targeted genetic testing., Conclusions: Quantifying the frequency and spectrum of rare variation using population-level sequence data facilitates improved estimates of variant pathogenicity and penetrance and should be incorporated into the clinical decision-making algorithm when undertaking genetic testing.
- Published
- 2017
- Full Text
- View/download PDF
12. Delineating the phenotypic spectrum of Bainbridge-Ropers syndrome: 12 new patients with de novo , heterozygous, loss-of-function mutations in ASXL3 and review of published literature.
- Author
-
Balasubramanian M, Willoughby J, Fry AE, Weber A, Firth HV, Deshpande C, Berg JN, Chandler K, Metcalfe KA, Lam W, Pilz DT, and Tomkins S
- Subjects
- Adult, Child, Child, Preschool, Developmental Disabilities physiopathology, Female, Humans, Male, Exome Sequencing, Young Adult, Developmental Disabilities genetics, Developmental Disabilities pathology, Loss of Function Mutation genetics, Phenotype, Transcription Factors genetics
- Abstract
Background: Bainbridge-Ropers syndrome (BRPS) is a recently described developmental disorder caused by de novo truncating mutations in the additional sex combs like 3 ( ASXL3 ) gene. To date, there have been fewer than 10 reported patients., Objectives: Here, we delineate the BRPS phenotype further by describing a series of 12 previously unreported patients identified by the Deciphering Developmental Disorders study., Methods: Trio-based exome sequencing was performed on all 12 patients included in this study, which found a de novo truncating mutation in ASXL3 . Detailed phenotypic information and patient images were collected and summarised as part of this study., Results: By obtaining genotype:phenotype data, we have been able to demonstrate a second mutation cluster region within ASXL3 . This report expands the phenotype of older patients with BRPS; common emerging features include severe intellectual disability (11/12), poor/ absent speech (12/12), autistic traits (9/12), distinct face (arched eyebrows, prominent forehead, high-arched palate, hypertelorism and downslanting palpebral fissures), (9/12), hypotonia (11/12) and significant feeding difficulties (9/12) when young., Discussion: Similarities in the patients reported previously in comparison with this cohort included their distinctive craniofacial features, feeding problems, absent/limited speech and intellectual disability. Shared behavioural phenotypes include autistic traits, hand-flapping, rocking, aggressive behaviour and sleep disturbance., Conclusions: This series expands the phenotypic spectrum of this severe disorder and highlights its surprisingly high frequency. With the advent of advanced genomic screening, we are likely to identify more variants in this gene presenting with a variable phenotype, which this study will explore., Competing Interests: Competing interests: None declared., (Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/.)
- Published
- 2017
- Full Text
- View/download PDF
13. Genome-wide association study of sporadic brain arteriovenous malformations.
- Author
-
Weinsheimer S, Bendjilali N, Nelson J, Guo DE, Zaroff JG, Sidney S, McCulloch CE, Al-Shahi Salman R, Berg JN, Koeleman BP, Simon M, Bostroem A, Fontanella M, Sturiale CL, Pola R, Puca A, Lawton MT, Young WL, Pawlikowska L, Klijn CJ, and Kim H
- Subjects
- Adult, Cohort Studies, Female, Gene Frequency, Genetic Predisposition to Disease genetics, Genotype, Humans, Male, White People, Genome-Wide Association Study, Intracranial Arteriovenous Malformations genetics, Polymorphism, Single Nucleotide genetics
- Abstract
Background: The pathogenesis of sporadic brain arteriovenous malformations (BAVMs) remains unknown, but studies suggest a genetic component. We estimated the heritability of sporadic BAVM and performed a genome-wide association study (GWAS) to investigate association of common single nucleotide polymorphisms (SNPs) with risk of sporadic BAVM in the international, multicentre Genetics of Arteriovenous Malformation (GEN-AVM) consortium., Methods: The Caucasian discovery cohort included 515 BAVM cases and 1191 controls genotyped using Affymetrix genome-wide SNP arrays. Genotype data were imputed to 1000 Genomes Project data, and well-imputed SNPs (>0.01 minor allele frequency) were analysed for association with BAVM. 57 top BAVM-associated SNPs (51 SNPs with p<10(-05) or p<10(-04) in candidate pathway genes, and 6 candidate BAVM SNPs) were tested in a replication cohort including 608 BAVM cases and 744 controls., Results: The estimated heritability of BAVM was 17.6% (SE 8.9%, age and sex-adjusted p=0.015). None of the SNPs were significantly associated with BAVM in the replication cohort after correction for multiple testing. 6 SNPs had a nominal p<0.1 in the replication cohort and map to introns in EGFEM1P, SP4 and CDKAL1 or near JAG1 and BNC2. Of the 6 candidate SNPs, 2 in ACVRL1 and MMP3 had a nominal p<0.05 in the replication cohort., Conclusions: We performed the first GWAS of sporadic BAVM in the largest BAVM cohort assembled to date. No GWAS SNPs were replicated, suggesting that common SNPs do not contribute strongly to BAVM susceptibility. However, heritability estimates suggest a modest but significant genetic contribution., (Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://www.bmj.com/company/products-services/rights-and-licensing/)
- Published
- 2016
- Full Text
- View/download PDF
14. Functionally distinct groups of inherited PTEN mutations in autism and tumour syndromes.
- Author
-
Spinelli L, Black FM, Berg JN, Eickholt BJ, and Leslie NR
- Subjects
- Autistic Disorder enzymology, Biocatalysis, Cells, Cultured, Hamartoma Syndrome, Multiple enzymology, Humans, Neurons metabolism, PTEN Phosphohydrolase chemistry, Protein Stability, Autistic Disorder genetics, Genetic Predisposition to Disease, Hamartoma Syndrome, Multiple genetics, Inheritance Patterns genetics, Mutation, Missense genetics, PTEN Phosphohydrolase genetics
- Abstract
Background: Germline mutations in the phosphatase PTEN are associated with diverse human pathologies, including tumour susceptibility, developmental abnormalities and autism, but any genotype-phenotype relationships are poorly understood., Methods: We have studied the functional consequences of seven PTEN mutations identified in patients diagnosed with autism and macrocephaly and five mutations from severe tumour bearing sufferers of PTEN hamartoma tumour syndrome (PHTS)., Results: All seven autism-associated PTEN mutants investigated retained the ability to suppress cellular AKT signalling, although five were highly unstable. Observed effects on AKT also correlated with the ability to suppress soma size and the length and density of dendritic spines in primary neurons. Conversely, all five PTEN mutations from severe cases of PHTS appeared to directly and strongly disrupt the ability to inhibit AKT signalling., Conclusions: Our work implies that alleles causing incomplete loss of PTEN function are more commonly linked to autism than to severe PHTS cases., (Published by the BMJ Publishing Group Limited. For permission to use (where not already granted under a licence) please go to http://group.bmj.com/group/rights-licensing/permissions.)
- Published
- 2015
- Full Text
- View/download PDF
15. Attenuated familial adenomatous polyposis manifests as autosomal dominant late-onset colorectal cancer.
- Author
-
Ibrahim A, Barnes DR, Dunlop J, Barrowdale D, Antoniou AC, and Berg JN
- Subjects
- Adenomatous Polyposis Coli complications, Adenomatous Polyposis Coli Protein genetics, Adenomatous Polyposis Coli Protein metabolism, Adult, Aged, Colorectal Neoplasms complications, Colorectal Neoplasms diagnosis, Exons, Female, Genetic Testing, Germ-Line Mutation, Humans, Male, Middle Aged, Pedigree, Risk Factors, Young Adult, Adenomatous Polyposis Coli genetics, Colorectal Neoplasms genetics
- Abstract
Colorectal cancer (CRC) risk is well defined for families of patients with classical familial adenomatous polyposis (FAP). However, the risk for those with an attenuated form of FAP is less well characterised. In this study, we estimated CRC risks for carriers of a novel germline mutation in the APC gene that causes attenuated FAP (AFAP). We performed genetic testing on 53 individuals from seven AFAP families harbouring an identical APC:c.288T>A mutation. Using a modified segregation analysis, we estimated relative and absolute CRC risks for mutation carriers. Twenty-three individuals harboured the disease causing mutation. CRC occurred in 28 individuals (mean 61.7 years, range 32-80 years). The estimated CRC relative risks for mutation carriers aged 60-69 and ≥70 years were 19 (95% CI: 1.77-204.08) and 45 (95% CI: 11.32-180.10), respectively, while the absolute CRC lifetime risk for men was 94% (95% CI: 67.5-99.9%), and for women, 84% (95% CI: 50.9-99.0%). This study shows that AFAP can manifest as autosomal dominant late-onset CRC. These findings highlight a subgroup of inherited CRCs that require new criteria for identification and surveillance.
- Published
- 2014
- Full Text
- View/download PDF
16. Germline FH mutations presenting with pheochromocytoma.
- Author
-
Clark GR, Sciacovelli M, Gaude E, Walsh DM, Kirby G, Simpson MA, Trembath RC, Berg JN, Woodward ER, Kinning E, Morrison PJ, Frezza C, and Maher ER
- Subjects
- Adolescent, Age of Onset, Aged, Child, Child, Preschool, Female, Humans, Infant, Infant, Newborn, Male, Middle Aged, Paraganglioma genetics, Young Adult, Adrenal Gland Neoplasms genetics, Fumarate Hydratase genetics, Germ-Line Mutation, Mutation, Missense, Pheochromocytoma genetics
- Abstract
Context: At least a third of the patients with pheochromocytoma (PCC) or paraganglioma (PGL) harbor an underlying germline mutation in a known PCC/PGL gene. Mutations in genes (SDHB, SDHD, SDHC, and SDHA) encoding a component of the tricarboxylic acid cycle, succinate dehydrogenase (SDH), are a major cause of inherited PCC and PGL. SDHB mutations are also, albeit less frequently, associated with inherited renal cell carcinoma. Inactivation of SDH and another tricarboxylic acid cycle component, fumarate hydratase (FH), have both been associated with abnormalities of cellular metabolism, responsible for the activation of hypoxic gene response pathways and epigenetic alterations (eg, DNA methylation). However, the clinical phenotype of germline mutations in SDHx genes and FH is usually distinct, with FH mutations classically associated with hereditary cutaneous and uterine leiomyomatosis and renal cell carcinoma, although recently an association with PCC/PGL has been reported., Objective and Design: To identify potential novel PCC/PGL predisposition genes, we initially undertook exome resequencing studies in a case of childhood PCC, and subsequently FH mutation analysis in a further 71 patients with PCC, PGL, or head and neck PGL., Results: After identifying a candidate FH missense mutation in the exome study, we then detected a further candidate missense mutation (p.Glu53Lys) by candidate gene sequencing. In vitro analyses demonstrated that both missense mutations (p.Cys434Tyr and p.Glu53Lys) were catalytically inactive., Conclusions: These findings 1) confirm that germline FH mutations may present, albeit rarely with PCC or PGL; and 2) extend the clinical phenotype associated with FH mutations to pediatric PCC.
- Published
- 2014
- Full Text
- View/download PDF
17. EXOSC3 mutations in pontocerebellar hypoplasia type 1: novel mutations and genotype-phenotype correlations.
- Author
-
Eggens VR, Barth PG, Niermeijer JM, Berg JN, Darin N, Dixit A, Fluss J, Foulds N, Fowler D, Hortobágyi T, Jacques T, King MD, Makrythanasis P, Máté A, Nicoll JA, O'Rourke D, Price S, Williams AN, Wilson L, Suri M, Sztriha L, Dijns-de Wissel MB, van Meegen MT, van Ruissen F, Aronica E, Troost D, Majoie CB, Marquering HA, Poll-Thé BT, and Baas F
- Subjects
- Brain pathology, Female, Genetic Association Studies, Humans, Male, Mutation, Exosome Multienzyme Ribonuclease Complex genetics, Olivopontocerebellar Atrophies genetics, RNA-Binding Proteins genetics
- Abstract
Background: Pontocerebellar hypoplasia (PCH) represents a group of neurodegenerative disorders with prenatal onset. Eight subtypes have been described thus far (PCH1-8) based on clinical and genetic features. Common characteristics include hypoplasia and atrophy of the cerebellum, variable pontine atrophy, and severe mental and motor impairments. PCH1 is distinctly characterized by the combination with degeneration of spinal motor neurons. Recently, mutations in the exosome component 3 gene (EXOSC3) have been identified in approximately half of the patients with PCH subtype 1., Methods: We selected a cohort of 99 PCH patients (90 families) tested negative for mutations in the TSEN genes, RARS2, VRK1 and CASK. Patients in this cohort were referred with a tentative diagnose PCH type 1, 2, 4, 7 or unclassified PCH. Genetic analysis of the EXOSC3 gene was performed using Sanger sequencing. Clinical data, MR images and autopsy reports of patients positive for EXOSC3 mutations were analyzed., Results: EXOSC3 mutations were found in twelve families with PCH subtype 1, and were not found in patients with other PCH subtypes. Identified mutations included a large deletion, nonsense and missense mutations. Examination of clinical data reveals a prolonged disease course in patients with a homozygous p.D132A mutation. MRI shows variable pontine hypoplasia in EXOSC3 mediated PCH, where the pons is largely preserved in patients with a homozygous p.D132A mutation, but attenuated in patients with other mutations. Additionally, bilateral cerebellar cysts were found in patients compound heterozygous for a p.D132A mutation and a nonsense allele., Conclusions: EXOSC3 mediated PCH shows clear genotype-phenotype correlations. A homozygous p.D132A mutation leads to PCH with possible survival into early puberty, and preservation of the pons. Compound heterozygosity for a p.D132A mutation and a nonsense or p.Y109N allele, a homozygous p.G31A mutation or a p.G135E mutation causes a more rapidly progressive course leading to death in infancy and attenuation of the ventral pons.Our findings imply a clear correlation between genetic mutation and clinical outcome in EXOSC3 mediated PCH, including variable involvement of the pons.
- Published
- 2014
- Full Text
- View/download PDF
18. Lifestyle changes in women at genetic risk of breast cancer: an observational study.
- Author
-
McLeish L, Reis MM, Stewart C, Goudie DR, Berg JN, Harvie M, Hanning KA, Vysny H, and Steel CM
- Subjects
- Adult, Alcohol Drinking prevention & control, Breast Neoplasms genetics, Exercise, Female, Humans, Middle Aged, Obesity prevention & control, Regression Analysis, Risk Factors, Scotland, Smoking Prevention, Surveys and Questionnaires, Women, Attitude to Health, Breast Neoplasms prevention & control, Internal-External Control, Life Style, Risk Reduction Behavior
- Abstract
Background: Lifestyle influences breast cancer risk. Women at increased familial risk may benefit from modifying behaviour, but it is not known to what extent they do so., Purpose: This study aims to measure changes that UK (Scottish) women make in response to increased familial risk of breast cancer and attitudes to a risk-reduction trial., Methods: A questionnaire, completed by 140 "breast cancer family" clinic patients, generated data on habitual diet, alcohol consumption and exercise, changes made after learning of breast cancer risk and attitudes to possible further changes. Subgroups of patients were defined by criteria likely to influence changes in behaviour. Between-group differences were analysed by Fisher's exact test and overall correlations by linear regression., Results: Thirty-six subjects (26 %) reported no behavioural change but, overall, around 25 % of diet, exercise and alcohol items had been changed. Women perceiving their lifetime cancer risk to be high (>50 %) and those who were obese (BMI >25) had made significantly more changes than others. Younger women (<40 years) and those with daughters had made fewer changes. Almost all suggested elements of a risk-reduction trial were strongly supported., Conclusions: Scottish women at increased risk of breast cancer have scope for protective changes in lifestyle and support a risk-reduction trial. The needs of younger women and of those with daughters should be addressed in its design.
- Published
- 2013
- Full Text
- View/download PDF
19. FGFR2 protein expression in breast cancer: nuclear localisation and correlation with patient genotype.
- Author
-
Martin AJ, Grant A, Ashfield AM, Palmer CN, Baker L, Quinlan PR, Purdie CA, Thompson AM, Jordan LB, and Berg JN
- Abstract
Background: Single Nucleotide Polymorphisms (SNPs) in intron 2 of the Fibroblast Growth Factor Receptor Type 2 (FGFR2) gene, including rs2981582, contribute to multifactorial breast cancer susceptibility. The high risk polymorphism haplotype in the FGFR2 gene has been associated with increased mRNA transcription and altered transcription factor binding but the effect on FGFR2 protein expression is unknown. 40 breast tumours were identified from individuals with known rs2981582 genotype. Tumour sections were stained for FGFR2 protein expression, and scored for nuclear and cytoplasmic staining in tumour and surrounding normal tissue., Findings: FGFR2 immunohistochemistry demonstrated variable nuclear staining in normal tissue and tumour tissue, as well as consistent cytoplasmic staining. We did not find an association between nuclear staining for FGFR2 and genotype, and there was no association between FGFR2 staining and estrogen or progestogen receptor status. There was an association between presence of nuclear staining for FGFR2 in normal tissue and presence of nuclear staining in the adjacent tumour (Fishers exact test, p = 0.002)., Conclusions: Variable nuclear staining for FGFR2 in breast cancer, but an absence of correlation with rs2981582 genotype suggests that the mechanism of action of polymorphisms at the FGFR2 locus may be more complex than a direct effect on mRNA expression levels in the final cancer. The effect may relate to FGFR2 function or localisation during breast development or tumourigenesis. Nuclear localisation of FGFR2 suggests an important additional role for this protein in breast development and breast cancer, in addition to its function as a classical cell surface receptor.
- Published
- 2011
- Full Text
- View/download PDF
20. Sulfonylureas and on-clopidogrel platelet reactivity in type 2 diabetes mellitus patients.
- Author
-
Harmsze AM, Van Werkum JW, Moral F, Ten Berg JN, Hackeng CM, Klungel OH, De Boer A, and Deneer VH
- Subjects
- Aged, Clopidogrel, Cohort Studies, Cytochrome P-450 Enzyme System metabolism, Drug Interactions, Female, Humans, Hypoglycemic Agents pharmacology, Hypoglycemic Agents therapeutic use, Male, Middle Aged, Platelet Function Tests, Ticlopidine therapeutic use, Blood Platelets drug effects, Blood Platelets metabolism, Diabetes Mellitus, Type 2 drug therapy, Diabetes Mellitus, Type 2 pathology, Platelet Aggregation Inhibitors pharmacology, Platelet Aggregation Inhibitors therapeutic use, Sulfonylurea Compounds pharmacology, Sulfonylurea Compounds therapeutic use, Ticlopidine analogs & derivatives
- Abstract
Clopidogrel is a prodrug that needs to be converted in?vivo by several cytochrome (CYP) P450 iso-enzymes to become active. Both clopidogrel and the oral hypoglycemic drug class sulfonylureas are metabolized by the iso-enzyme CYP2C9. The objective of the study was to evaluate the relationship of sulfonylureas and on-clopidogrel platelet reactivity in type 2 diabetes mellitus patients undergoing elective coronary stent implantation. In this prospective, observational study, on-clopidogrel platelet reactivity was quantified using adenosine diphosphate (ADP)-induced light transmittance aggregometry in 139 type 2 diabetes mellitus patients undergoing elective coronary stent implantation treated with clopidogrel and aspirin. High on-clopidogrel platelet reactivity was defined as >70.7% platelet reactivity to 20 μmol/L ADP. A total of 53 patients (38.1%) were on concomitant treatment with sulfonylureas. The remaining 86 patients were on other hypoglycemic drugs. On-clopidogrel platelet reactivity was significantly higher in patients with concomitant sulfonylurea treatment as compared to patients without concomitant sulfonylurea treatment (for 5 μmol/L ADP: 46.0% ± 11.8 vs. 40.6% ± 16.0; p=0.035, adjusted p=0.032 and for 20 μmol/L ADP: 64.6% ± 10.8 vs. 58.7% ± 15.5; p=0.019, adjusted p=0.017). The concomitant use of sulfonylureas was associated with a 2.2-fold increased risk of high on-clopidogrel platelet reactivity (OR 2.2, 95% CI 1.1-4.7, p=0.039 and after adjustment for confounders: OR(adj) 2.0, 95% CI 1.0-5.7, p=0.048). Concomitant treatment with sulfonylureas might be associated with decreased platelet inhibition by clopidogrel in type 2 diabetes mellitus patients on dual antiplatelet therapy undergoing elective coronary stent implantation.
- Published
- 2011
- Full Text
- View/download PDF
21. A boy with supernumerary mosaic trisomy 19q, involving 19q13.11-19q13.2, with macrocephaly, obesity and mild facial dysmorphism.
- Author
-
Hall CEJ, Cunningham JJP, Hislop RG, and Berg JN
- Subjects
- Child, Preschool, Humans, Male, Abnormalities, Multiple genetics, Chromosomes, Human, Pair 18, Face abnormalities, Megalencephaly, Mosaicism, Obesity
- Published
- 2010
- Full Text
- View/download PDF
22. Life expectancy and death from cardiomyopathy amongst carriers of Duchenne and Becker muscular dystrophy in Scotland.
- Author
-
Holloway SM, Wilcox DE, Wilcox A, Dean JC, Berg JN, Goudie DR, Denvir MA, and Porteous ME
- Subjects
- Adult, Aged, Aged, 80 and over, Cardiomyopathy, Dilated genetics, Dystrophin genetics, Female, Heterozygote, Humans, Male, Middle Aged, Muscular Dystrophy, Duchenne genetics, Pedigree, Registries, Scotland epidemiology, Sex Factors, Survival Analysis, Cardiomyopathy, Dilated mortality, Life Expectancy, Muscular Dystrophy, Duchenne mortality
- Abstract
Objectives: To assess life expectancy and cardiovascular mortality in carriers of Duchenne and Becker muscular dystrophy., Design: Family pedigrees of individuals affected with these conditions, held by the four genetics centres in Scotland, were examined to identify a cohort of definite carriers. Electronic death registration data, held by the General Register Office for Scotland, were used to identify death certificates of carriers who had died, to obtain age at death and cause of death. Survival and mortality data were obtained for the general population for comparison., Patients: 397 definite carriers in 202 pedigrees were identified from which 94 deaths were identified by record linkage to death certificates., Main Outcome Measures: Observed numbers surviving to certain ages and numbers dying of cardiac causes were compared with expected numbers calculated from general population data., Results: There were no significant differences between observed and expected numbers surviving to ages 40-90. The standardised mortality ratio for the 371 carriers alive in 1974 was 0.53 (95% confidence interval 0.32 to 0.82)., Conclusions: Whereas female carriers may have clinical features of cardiomyopathy, this study does not suggest that this is associated with reduced life expectancy or increased risk of cardiac death. Routine cardiac surveillance of obligate carriers is therefore probably unnecessary.
- Published
- 2008
- Full Text
- View/download PDF
23. Human retroviral gag- and gag-pol-like proteins interact with the transforming growth factor-beta receptor activin receptor-like kinase 1.
- Author
-
Lux A, Beil C, Majety M, Barron S, Gallione CJ, Kuhn HM, Berg JN, Kioschis P, Marchuk DA, and Hafner M
- Subjects
- Activin Receptors, Type II, Amino Acid Motifs, Animals, Blotting, Northern, Blotting, Western, CHO Cells, COS Cells, Cell Line, Cloning, Molecular, Cricetinae, Cytoplasm metabolism, DNA Transposable Elements, Gene Library, Genes, Reporter, Humans, Immunoprecipitation, Luciferases metabolism, Microscopy, Fluorescence, Models, Genetic, Mutation, Neurons metabolism, Open Reading Frames, Polymerase Chain Reaction, Protein Binding, Protein Structure, Tertiary, Retroviridae genetics, Reverse Transcriptase Polymerase Chain Reaction, Signal Transduction, Tissue Distribution, Transfection, Two-Hybrid System Techniques, U937 Cells, Activin Receptors, Type I metabolism, Fusion Proteins, gag-pol metabolism, Gene Products, gag metabolism, Retroviridae metabolism, Transforming Growth Factor beta metabolism
- Abstract
Mutations in activin receptor-like kinase 1 (ALK1), a transforming growth factor (TGF)-beta type I receptor, lead to the vascular disorder hereditary hemorrhagic telangiectasia caused by abnormal vascular remodeling. The underlying molecular cause of this disease is not well understood. Identifying binding partners for ALK1 will help to understand its cellular function. Using the two-hybrid system, we identified an ALK1-binding protein encoded by an ancient retroviral/retrotransposon element integrated as a single copy gene known as PEG10 on human chromosome 7q21. PEG10 contains two overlapping reading frames from which two proteins, PEG10-RF1 and PEG10-RF1/2, are translated by a typical retroviral -1 ribosomal frameshift mechanism. Reverse transcription-PCR and Northern blot analysis showed a broad range of PEG10 expression in different tissues and cell types, i.e. human placenta, brain, kidney, endothelial cells, lymphoblasts, and HepG2 and HEK293 cells. However, endogenous PEG10-RF1 and PEG10-RF1/2 proteins were only detected in HepG2 and HEK293 cells. PEG10-RF1, which is the major PEG10 protein product, represents a gag-like protein, and PEG10-RF1/2 represents a gag-pol-like protein. PEG10-RF1 also interacts with different members of TGF-beta superfamily type I and II receptors. PEG10-RF1 binding to ALK1 is mediated by a 200-amino acid domain with no recognized motif. PEG10-RF1 inhibits ALK1 as well as ALK5 signaling. Co-expression of ALK1 and PEG10-RF1 in different cell types induced morphological changes reminiscent of neuronal cells or sprouting cells. This is the first report of a human retroviral-like protein interacting with members of the TGF-beta receptor family.
- Published
- 2005
- Full Text
- View/download PDF
24. Evidence for loss of heterozygosity of 5q in sporadic haemangiomas: are somatic mutations involved in haemangioma formation?
- Author
-
Berg JN, Walter JW, Thisanagayam U, Evans M, Blei F, Waner M, Diamond AG, Marchuk DA, and Porteous ME
- Subjects
- Chromosomes, Human, Pair 9 genetics, Female, Humans, Infant, Male, Microsatellite Repeats, Chromosomes, Human, Pair 5 genetics, Hemangioma genetics, Loss of Heterozygosity
- Abstract
Background/aims: Haemangiomas are common benign tumours of infancy that consist of rapidly proliferating endothelial cells. A locus for an autosomal dominant predisposition to haemangioma has been identified recently on chromosome 5q. This study aimed to investigate loss of heterozygosity on chromosomes 5 and 9 in haemangiomas., Methods: Sporadic proliferative phase haemangiomas were microdissected. Polymerase chain reaction amplification and analysis of microsatellite markers on chromosomes 5 and 9 was carried out., Results: There was a significant loss of heterozygosity for markers on chromosome 5q in haemangioma tissue, when compared with either markers from chromosome 5p (p < 0.05) or markers from chromosome 9 (p < 0.05)., Conclusions: These results suggest that haemangioma formation might be associated with somatic mutational events, and provides evidence that a locus on 5q is involved in the formation of sporadic haemangiomas.
- Published
- 2001
- Full Text
- View/download PDF
25. A family with hereditary port wine stain.
- Author
-
Berg JN, Quaba AA, Georgantopoulou A, and Porteous ME
- Subjects
- Family Health, Female, Humans, Male, Pedigree, Port-Wine Stain genetics
- Published
- 2000
- Full Text
- View/download PDF
26. Two common endoglin mutations in families with hereditary hemorrhagic telangiectasia in the Netherlands Antilles: evidence for a founder effect.
- Author
-
Gallione CJ, Scheessele EA, Reinhardt D, Duits AJ, Berg JN, Westermann CJ, and Marchuk DA
- Subjects
- Alleles, Antigens, CD, Chromosomes, Human, Pair 9, DNA Mutational Analysis, Endoglin, Family Health, Genetic Markers, Genotype, Haplotypes, Humans, Netherlands Antilles, Polymorphism, Genetic, Receptors, Cell Surface, Founder Effect, Mutation, Telangiectasia, Hereditary Hemorrhagic genetics, Vascular Cell Adhesion Molecule-1 genetics
- Abstract
Hereditary hemorrhagic telangiectasia (HHT) is an autosomal dominant bleeding disorder characterized by localized angiodysplasia. Mutations in either of two genes, endoglin or ALK-1, can cause HHT. Both genes encode putative receptors for the transforming growth factor-beta superfamily of ligands. Many mutations in each gene have been identified in HHT kindreds from around the world, and with few exceptions mutations are unique and family specific. The prevalence of HHT in the Leeward Islands of the Netherlands Antilles is possibly the highest of any geographical location. We wished to establish whether this high prevalence is due to a genetic founder effect or to multiple mutational events. HHT kindreds from the Netherlands Antilles and The Netherlands were screened for mutations in the two genes associated with HHT. Haplotype analysis of a 5-cM region on chromosome 9 flanking the endoglin gene revealed three distinct disease haplotypes in the ten Antillean families studied. Seven of these families share a splice-site mutation in exon 1 of endoglin. Two other Antillean families share a missense mutation in exon 9a of endoglin. This mutation was also found in a Dutch family that shares the same disease haplotype as the Antillean families with this mutation. Thus it appears that HHT in the Netherlands Antilles is due to a limited number of ancestral mutations in the endoglin gene, and that one of these mutations was introduced into the African slave population by a Dutch colonist. The limited scope of mutations suggests that a presymptomatic screening program for HHT would be feasible in this population.
- Published
- 2000
- Full Text
- View/download PDF
27. Allelic and locus heterogeneity in inherited venous malformations.
- Author
-
Calvert JT, Riney TJ, Kontos CD, Cha EH, Prieto VG, Shea CR, Berg JN, Nevin NC, Simpson SA, Pasyk KA, Speer MC, Peters KG, and Marchuk DA
- Subjects
- Amino Acid Sequence, Amino Acid Substitution, Animals, Base Sequence, COS Cells, Female, Humans, Ligands, Male, Molecular Sequence Data, Mutation, Pedigree, Phosphorylation, Sequence Alignment, Transfection, Vascular Diseases pathology, Genetic Variation, Vascular Diseases genetics
- Abstract
Venous malformations are low-flow vascular lesions consisting of disorganized thin-walled vascular channels. These can occur sporadically but also as an autosomal dominant condition termed venous malformations, cutaneous and mucosal (VMCM; OMIM 600195). In two large unrelated kindreds mapping to chromosome 9, the identical R849W missense mutation was identified in the first kinase domain of Tie2, an endothelial cell-specific receptor tyrosine kinase. We report here the identification of four new kindreds with inherited venous malformations. Unlike the initial two families described, these four families demonstrate allelic and locus heterogeneity. In one of these families, the R849W mutation co-segregates with the disease phenotype. Three other families with venous malformations lack this mutation. One of these families is linked to markers near TIE2 on chromosome 9. In this family, we identified a novel mutation within the first kinase domain of Tie2 resulting in a Y897S change. Results from COS-1 cell transfections using expression constructs containing either the R849W or the Y897S mutation suggest that the receptors containing either mutation show ligand-independent hyperphosphorylation. These results suggest a gain-of-function mechanism for development of venous malformations in these families. Of the two remaining families, one excludes linkage to the TIE2 locus, establishing the existence of at least one additional locus for dominantly inherited venous malformations.
- Published
- 1999
- Full Text
- View/download PDF
28. Mutation and expression analysis of the endoglin gene in hereditary hemorrhagic telangiectasia reveals null alleles.
- Author
-
Gallione CJ, Klaus DJ, Yeh EY, Stenzel TT, Xue Y, Anthony KB, McAllister KA, Baldwin MA, Berg JN, Lux A, Smith JD, Vary CP, Craigen WJ, Westermann CJ, Warner ML, Miller YE, Jackson CE, Guttmacher AE, and Marchuk DA
- Subjects
- Alleles, Antigens, CD, Base Sequence, DNA Primers genetics, Endoglin, Gene Expression, Genetic Linkage, Humans, Molecular Sequence Data, Phenotype, Polymerase Chain Reaction, Receptors, Cell Surface, Telangiectasia, Hereditary Hemorrhagic etiology, Mutation, Telangiectasia, Hereditary Hemorrhagic genetics, Vascular Cell Adhesion Molecule-1 genetics
- Abstract
Hereditary Hemorrhagic Telangiectasia (HHT) is an autosomal dominant disorder characterized by multisystemic vascular dysplasia and recurrent hemorrhage from the sites of vascular lesions. Two genes have been identified for HHT. Endoglin, a TGF-beta binding protein which maps to chromosome 9q3, is the gene for HHT1. The type and location of most of the previously described mutations in the endoglin (ENG) gene suggested a dominant-negative model of receptor-complex dysfunction for the molecular basis of this disorder. In this article we describe 11 novel ENG mutations in HHT kindreds, which include missense and splice-site mutations. Two identical missense mutations in unrelated families disrupt the start codon of the gene. In addition, some frameshift and nonsense mutations lead to very low or undetectable levels of transcript from the mutant allele. These combined data suggest that the nature of most ENG mutations is to create a null (nonfunctional) allele, and that there is no requirement for the synthesis of a truncated endoglin protein in the pathogenesis of HHT.
- Published
- 1998
- Full Text
- View/download PDF
29. The activin receptor-like kinase 1 gene: genomic structure and mutations in hereditary hemorrhagic telangiectasia type 2.
- Author
-
Berg JN, Gallione CJ, Stenzel TT, Johnson DW, Allen WP, Schwartz CE, Jackson CE, Porteous ME, and Marchuk DA
- Subjects
- Activin Receptors, Alleles, Animals, Female, Genetic Linkage, Humans, Male, Mice, Molecular Sequence Data, Pedigree, Chromosomes, Human, Pair 12, Chromosomes, Human, Pair 9, Genome, Human, Mutation, Protein Serine-Threonine Kinases genetics, Telangiectasia, Hereditary Hemorrhagic genetics
- Abstract
The activin receptor-like kinase 1 gene (ALK-1) is the second locus for the autosomal dominant vascular disease hereditary hemorrhagic telangiectasia (HHT). In this paper we present the genomic structure of the ALK-1 gene, a type I serine-threonine kinase receptor expressed predominantly in endothelial cells. The coding region is contained within nine exons, spanning < 15 kb of genomic DNA. All introns follow the GT-AG rule, except for intron 6, which has a TAG/gcaag 5' splice junction. The positions of introns in the intracellular domain are almost identical to those of the mouse serine-threonine kinase receptor TSK-7L. By sequencing ALK-1 from genomic DNA, mutations were found in six of six families with HHT either shown to link to chromosome 12q13 or in which linkage of HHT to chromosome 9q33 had been excluded. Mutations were also found in three of six patients from families in which available linkage data were insufficient to allow certainty with regard to the locus involved. The high rate of detection of mutations by genomic sequencing of ALK-1 suggests that this will be a useful diagnostic test for HHT2, particularly where preliminary linkage to chromosome 12q13 can be established. In two cases in which premature termination codons were found in genomic DNA, the mutant mRNA was either not present or present at barely detectable levels. These data suggest that mutations in ALK-1 are functionally null alleles.
- Published
- 1997
- Full Text
- View/download PDF
30. Dietary fish oil enhances circulating interferon-gamma in mice during listeriosis without altering in vitro production of this cytokine.
- Author
-
Fritsche KL, Feng C, and Berg JN
- Subjects
- Animals, Dietary Fats pharmacology, Female, Interferon-gamma biosynthesis, Mice, Mice, Inbred C3H, Fish Oils pharmacology, Interferon-gamma blood, Listeriosis immunology
- Abstract
The objective of this study was to investigate the impact of feeding mice a diet rich in n-3 polyunsaturated fatty acids (PUFA) from fish oil on the interferon-gamma (IFN-gamma) response during an active infection with Listeria monocytogenes. Weanling female C3H/Hen mice were fed experimental diets containing 20% by weight one of the following fats: soybean oil, lard, or a mixture of menhaden fish oil and corn oil (17:3, w/w). After 4 weeks, mice were injected with 10(5) live L. monocytogenes, and the concentration of IFN-gamma in serum and spleen was determined 0, 2, 4, and 7 days postinfection by enzyme-linked immunosorbent assay (ELISA). Fish oil-fed mice showed significantly higher IFN-gamma in their blood at 2 and 4 days postchallenge compared with mice fed the soybean oil-containing or lard-containing diets (p < 0.001). A higher concentration of IFN-gamma was also found in the spleen homogenate of fish oil-fed mice on day 4 postchallenge (p < 0.005). To examine in vitro IFN-gamma production, splenocytes were isolated from fish oil-fed and soybean oil-fed mice on day 4 postchallenge and cultured with concanavalin A (1 microgram/ml and 10 micrograms/ml) for 24 and 48 h. There were no significant differences in the IFN-gamma concentration in cell culture supernatants between these diet treatments. This study demonstrated that the elevation in the concentration of IFN-gamma in blood and spleen during murine listeriosis is accentuated and prolonged by dietary n-3 PUFA, and these effects may not be due to changes in IFN-gamma production.
- Published
- 1997
- Full Text
- View/download PDF
31. Dietary fish oil reduces survival and impairs bacterial clearance in C3H/Hen mice challenged with Listeria monocytogenes.
- Author
-
Fritsche KL, Shahbazian LM, Feng C, and Berg JN
- Subjects
- Animals, Cattle, Colony Count, Microbial, Corn Oil, Dietary Fats administration & dosage, Female, Immunity, Innate, Listeriosis microbiology, Liver microbiology, Macrophages immunology, Mice, Mice, Inbred C3H, Neutrophils immunology, Random Allocation, Glycine max, Spleen microbiology, Dietary Fats, Unsaturated adverse effects, Fatty Acids, Omega-3 adverse effects, Fish Oils adverse effects, Listeriosis immunology, Nutritional Status
- Abstract
1. To investigate the effect of dietary fat source on host resistance to intracellular pathogens, weanling female C3H/Hen mice were fed one of three experimental diets containing, 20% by weight, lard, soybean oil or 17% menhaden fish oil plus 3% corn oil. After 4 weeks, survival of mice (n = 12/treatment group) injected intraperitoneally with 2 x 10(6) colony forming units of live Listeria monocytogenes was determined. In a second study, bacterial clearance from the liver and spleen at 2, 4 and 7 days post-challenge was determined (n = 8/treatment group). 2. We found that the survival of mice fed the diets with soybean oil or menhaden fish oil was significantly lower than those fed lard (P < 0.05). Survival rates were 58% (7/12), 33% (4/12) and 100% (12/12), respectively, for mice fed soybean oil, menhaden fish oil and lard. In the second study, mice fed menhaden fish oil had approximately 1 log10 greater bacteria in their spleens at day 4 than mice fed lard or soybean oil (P < 0.001). There were no significant treatment differences in the number of bacteria recovered from liver samples. 3. In summary, dietary fat source significantly affects murine resistance to Listeria, with diets rich in n-3 polyunsaturated fatty acids, such as from fish oil, having the most detrimental effect.
- Published
- 1997
- Full Text
- View/download PDF
32. Mutations in the activin receptor-like kinase 1 gene in hereditary haemorrhagic telangiectasia type 2.
- Author
-
Johnson DW, Berg JN, Baldwin MA, Gallione CJ, Marondel I, Yoon SJ, Stenzel TT, Speer M, Pericak-Vance MA, Diamond A, Guttmacher AE, Jackson CE, Attisano L, Kucherlapati R, Porteous ME, and Marchuk DA
- Subjects
- Activin Receptors, Amino Acid Sequence, Base Sequence, Chromosome Mapping, Female, Humans, Male, Molecular Sequence Data, Pedigree, Telangiectasia, Hereditary Hemorrhagic classification, Chromosomes, Human, Pair 12, Mutation, Protein Serine-Threonine Kinases genetics, Telangiectasia, Hereditary Hemorrhagic genetics
- Abstract
Hereditary haemorrhagic telangiectasia, or Osler-Rendu-Weber (ORW) syndrome, is an autosomal dominant vascular dysplasia. So far, two loci have been demonstrated for ORW. Linkage studies established an ORW locus at chromosome 9q3; endoglin was subsequently identified as the ORW1 gene. A second locus, designated ORW2, was mapped to chromosome 12. Here we report a new 4 cM interval for ORW2 that does not overlap with any previously defined. A 1.38-Mb YAC contig spans the entire interval. It includes the activin receptor like kinase 1 gene (ACVRLK1 or ALK1), a member of the serine-threonine kinase receptor family expressed in endothelium. We report three mutations in the coding sequence of the ALK1 gene in those families which show linkage of the ORW phenotype to chromosome 12. Our data suggest a critical role for ALK1 in the control of blood vessel development or repair.
- Published
- 1996
- Full Text
- View/download PDF
33. Clinical heterogeneity in hereditary haemorrhagic telangiectasia: are pulmonary arteriovenous malformations more common in families linked to endoglin?
- Author
-
Berg JN, Guttmacher AE, Marchuk DA, and Porteous ME
- Subjects
- Antigens, CD, Arteriovenous Fistula complications, Arteriovenous Fistula epidemiology, Endoglin, Epistaxis genetics, Female, Genetic Carrier Screening, Genetic Linkage, Humans, Male, Pedigree, Prevalence, Receptors, Cell Surface, Arteriovenous Fistula genetics, Pulmonary Artery abnormalities, Pulmonary Veins abnormalities, Telangiectasia, Hereditary Hemorrhagic genetics, Vascular Cell Adhesion Molecule-1 genetics
- Abstract
Pulmonary arteriovenous malformations (PAVMs) occur in up to 27% of patients with hereditary haemorrhagic telangiectasia (HHT) and are associated with a rate of paradoxical cerebral embolism at presentation of up to 36%. At least two different loci have been shown for HHT. Mutations in endoglin have been found in some families and the locus designated ORW1. In other families this locus has been excluded. In this paper we confirm that in families linked to ORW1 there is a prevalence of PAVMs among affected members of 29.2%, compared to a prevalence of 2.9% in families in which this locus has been excluded (chi 2 = 19.2, p < 0.001). This information can be used to decide how to screen HHT patients for PAVMs.
- Published
- 1996
- Full Text
- View/download PDF
34. Six novel mutations in the endoglin gene in hereditary hemorrhagic telangiectasia type 1 suggest a dominant-negative effect of receptor function.
- Author
-
McAllister KA, Baldwin MA, Thukkani AK, Gallione CJ, Berg JN, Porteous ME, Guttmacher AE, and Marchuk DA
- Subjects
- Amino Acid Sequence, Antigens, CD, Base Sequence, Chromosome Mapping, Codon, Endoglin, Exons, Female, Frameshift Mutation, Genetic Linkage, Humans, Male, Molecular Sequence Data, Pedigree, Point Mutation, Polymerase Chain Reaction, Receptors, Cell Surface, Restriction Mapping, Sequence Deletion, Vascular Cell Adhesion Molecule-1 metabolism, Chromosomes, Human, Pair 9, Mutation, Telangiectasia, Hereditary Hemorrhagic genetics, Vascular Cell Adhesion Molecule-1 genetics
- Published
- 1995
- Full Text
- View/download PDF
35. A second locus for hereditary hemorrhagic telangiectasia maps to chromosome 12.
- Author
-
Johnson DW, Berg JN, Gallione CJ, McAllister KA, Warner JP, Helmbold EA, Markel DS, Jackson CE, Porteous ME, and Marchuk DA
- Subjects
- Chromosome Mapping, Chromosomes, Human, Pair 9 genetics, Female, Humans, Incidence, Lod Score, Lung blood supply, Lung pathology, Male, Pedigree, Telangiectasia, Hereditary Hemorrhagic pathology, Chromosomes, Human, Pair 12 genetics, Genetic Heterogeneity, Telangiectasia, Hereditary Hemorrhagic genetics
- Abstract
Hereditary hemorrhagic telangiectasia (HHT) or Osler-Rendu-Weber (ORW) disease is an autosomal dominant vascular dysplasia. Initial linkage studies identified an ORW gene localized to 9q33-q34 but with some families clearly excluding this region. A probable correlation in clinical phenotype between the 9q3-linked families and unlinked families was described with a significantly lower incidence of pulmonary arteriovenous malformations observed in the unlinked families. In this study we examined four unrelated ORW families for which linkage to chromosome 9q33-q34 has been previously excluded. Linkage was established for all four families to markers on chromosome 12, with a combined maximum lod score of 10.77 (theta = 0.04) with D12S339. Mapping of crossovers using haplotype analysis indicated that the candidate region lies in an 11-CM interval between D12S345 and D12S339, in the pericentromeric region of chromosome 12. A map location for a second ORW locus is thus established that exhibits a significantly reduced incidence of pulmonary involvement.
- Published
- 1995
- Full Text
- View/download PDF
36. Effects of three occlusive dressing materials on healing of full-thickness skin wounds in dogs.
- Author
-
Ramsey DT, Pope ER, Wagner-Mann C, Berg JN, and Swaim SF
- Subjects
- Amnion, Animals, Bacteria drug effects, Bacteria growth & development, Chlorhexidine therapeutic use, Epithelium physiology, Female, Horses, Male, Occlusive Dressings veterinary, Skin injuries, Wound Healing, Wounds and Injuries physiopathology
- Abstract
The effects of 3 occlusive dressing materials and a standard, nonadherent dressing material on healing of full-thickness skin defects were evaluated in dogs. Two wounds measuring 2 x 2 cm were created bilaterally (4 wounds/dog) on the dorsolateral aspect of the trunk of 12 Beagles. Wound treatments were evenly distributed between 4 sites, using a Latin square design. Treatments evaluated were: equine amnion (group A), biosynthetic hydrogel dressing (group B), transparent polyethylene sheeting (group T), and a semi-occlusive rayon/polyethylene, nonadherent dressing (group C). Rates of contraction and epithelialization of group-A wounds were significantly greater than those of wounds of groups C, B, and T. On days 14, 21, and 28, mean percentage of wound contraction and mean percentage of total wound healed in group A exceeded those wounds in groups C, B, and T. On day 28, wounds in group A were significantly smaller than wounds in groups B and T, but were not significantly smaller than wounds in group C. All wounds in group A achieved 100% healing during the 28-day study period. Mean time for complete healing of group-A wounds was 21 days. The percentages of wounds completely healed by day 28 for groups B, C, and T were 25, 67, and 25%, respectively. Results indicate that use of equine amnion as an occlusive biological dressing on full-thickness wounds in dogs increases rate of healing.
- Published
- 1995
37. Evaluation of a one-step surgical preparation technique in dogs.
- Author
-
Rochat MC, Mann FA, and Berg JN
- Subjects
- Animals, Bacteria growth & development, Colony Count, Microbial veterinary, Elective Surgical Procedures veterinary, Evaluation Studies as Topic, Female, Hysterectomy veterinary, Ovariectomy veterinary, Povidone-Iodine, Random Allocation, Skin microbiology, Surgical Wound Infection prevention & control, Yeasts growth & development, Dog Diseases prevention & control, Dogs surgery, Preoperative Care veterinary, Surgical Wound Infection veterinary
- Abstract
The efficacy of a 1-step surgical preparation technique for skin of dogs prior to elective ovariohysterectomy was evaluated. Dogs randomly assigned to group 1 (n = 30) had their skin prepared for surgery by use of a 2-step method, whereas the skin of dogs in group 2 (n = 30) was prepared for surgery by use of a commercially available product for a 1-step technique. Culture plates for quantitative bacterial counts were applied to the proposed incision site on dogs under general anesthesia after hair at the site was clipped and vacuumed but before antiseptic was applied. A second quantitative bacterial culture plate was applied to the proposed incision site after completion of the surgical preparation technique. Surgeries were routinely completed, and dogs were evaluated by physical examination the next day and at the time of suture removal (7 to 10 days after surgery) for complications. Postoperative complications were minor and consisted primarily of subcutaneous swelling, which resolved with time. All cultures obtained prior to skin preparation included bacteria or yeast. Sixteen cultures obtained after skin preparation (group 1, n = 11; group 2, n = 5) included bacteria or yeast. The total number of colonies of potential pathogens (Staphylococcus sp and Enterobacteriaceae) on the preparation cultures was 9,339; 4 colonies were counted on the postpreparation cultures. Potential bacterial pathogens, ie Streptococcus intermedius and gram-negative bacteria, were isolated from dogs prepared with the 2-step technique.(ABSTRACT TRUNCATED AT 250 WORDS)
- Published
- 1993
38. Ultrastructure and molecular characterization of Fusobacterium necrophorum biovars.
- Author
-
Garcia MM, Becker SA, Brooks BW, Berg JN, and Finegold SM
- Subjects
- Animals, Bacterial Capsules ultrastructure, Bacterial Proteins analysis, Bacterial Typing Techniques, Cattle, Cell Wall ultrastructure, Electrophoresis, Polyacrylamide Gel, Electrophoresis, Starch Gel, Fusobacterium necrophorum chemistry, Fusobacterium necrophorum classification, Fusobacterium necrophorum enzymology, Humans, Immunoblotting, Microscopy, Electron, Microscopy, Electron, Scanning, Oxidoreductases analysis, Sheep, Transferases analysis, Fusobacterium Infections microbiology, Fusobacterium necrophorum ultrastructure
- Abstract
The ultrastructural features and molecular components of 18 strains of Fusobacterium necrophorum biovars A, AB and B, isolated from animal and human infections, were examined by electron microscopy, multilocus enzyme electrophoresis (MEE) and by sodium dodecyl sulfate-gradient polyacrylamide gel electrophoresis (SDS-PAGE). High resolution scanning electron microscopy revealed that the strains possessed a convoluted surface pattern. Transmission electron microscopy showed that all strains possessed a cell wall structure typical of gram-negative bacteria. Bleb formation was not uncommon. Numerous extracellular materials, resembling lipopolysaccharide (LPS) fragments, surrounded cells of both human strains and biovar B animal strains. Biovar A field strains revealed capsules as stained by ruthenium red whereas a stock culture strain showed the capsule only when immunostabilized with hyperimmune serum. Starch gel electrophoresis showed all strains to possess adenyl kinase, glutamate dehydrogenases and lactate dehydrogenase; each enzyme migrated uniformly (monomorphic) among the strains and represented an electrotype. However, SDS-PAGE indicated differences in the protein profiles between all of the strains; the most distinctly different was a human isolate (FN 606). Silver staining to detect LPS showed extensive "ladder" patterns among the majority of biovar A strains but not in the animal biovar B strains. Immunoblotting of LPS with a rabbit antiserum prepared against phenol extracted LPS from a biovar A animal isolate (LA 19) suggested marked variability in the LPS antigens among the isolates studied.
- Published
- 1992
39. Release of tumor necrosis factor-alpha from bovine alveolar macrophages stimulated with bovine respiratory viruses and bacterial endotoxins.
- Author
-
Bienhoff SE, Allen GK, and Berg JN
- Subjects
- Animals, Antibodies, Monoclonal, Blotting, Western, Cattle, Cattle Diseases microbiology, Cells, Cultured, Endotoxins, Escherichia coli immunology, Herpesvirus 1, Bovine immunology, Macrophages, Alveolar microbiology, Parainfluenza Virus 3, Human immunology, Pasteurella immunology, Respiratory Syncytial Viruses immunology, Respiratory Tract Infections immunology, Respiratory Tract Infections microbiology, Cattle Diseases immunology, Macrophage Activation, Macrophages, Alveolar immunology, Respiratory Tract Infections veterinary, Tumor Necrosis Factor-alpha biosynthesis
- Abstract
The release of tumor necrosis factor-alpha (TNF-alpha) from cultured bovine alveolar macrophages (BAM) was evaluated following stimulation of BAM with bovine herpesvirus-1 (BHV-1), parainfluenza-3 (PI-3) virus, bovine respiratory syncytial virus (BRSV), Escherichia coli 0111:B4 endotoxin, Pasteurella haemolytica type 1 endotoxin, Pasteurella multocida endotoxin, and virus/endotoxin combinations. A cytotoxic assay system using Georgia bovine kidney cells as targets was used to measure TNF-alpha activity. The cytotoxic activity was neutralized by an anti-human TNF-alpha monoclonal antibody. Stimulation of BAM with 1 median tissue culture infectious dose (TCID50) of live or ultraviolet (UV)-inactivated PI-3 virus/cell resulted in release of TNF-alpha in significantly (P less than 0.05) higher amounts than sham-induced BAM. The quantities of TNF-alpha released after live or UV-inactivated BHV-1 or BRSV induction were not significantly higher than sham-induced BAM. E. coli 0111:B4, P. haemolytica type 1 and P. multocida endotoxins stimulated TNF-alpha release in a dose-dependent manner. Sequential exposure of BAM to 1 TCID50 per cell of either live BHV-1, PI-3 virus or BRSV and then 5 micrograms ml-1 of either E. coli 0111:B4, P. haemolytica type 1 or P. multocida endotoxin caused a significant (P less than 0.05) reduction in detectable TNF-alpha in seven of nine virus/endotoxin combinations tested, when compared with 5 micrograms ml-1 of endotoxin alone. Parainfluenza-3 virus/endotoxin combinations stimulated higher TNF-alpha release when compared with other virus/endotoxin combinations. Five out of six test animals had serum-neutralizing antibodies to PI-3 virus, one out of six had serum-neutralizing antibodies to BHV-1, and two out of six had serum-neutralizing antibodies to BRSV, suggesting a possible relationship between serum neutralizing antibodies and TNF-alpha release from in vitro cultivated BAM.
- Published
- 1992
- Full Text
- View/download PDF
40. Efficacy of ethylenediamine dihydriodide as an agent to prevent experimentally induced bovine foot rot.
- Author
-
Berg JN, Maas JP, Paterson JA, Krause GF, and Davis LE
- Subjects
- Animals, Bacteroides Infections prevention & control, Cattle, Disease Models, Animal, Female, Fusobacterium Infections prevention & control, Fusobacterium necrophorum, Iodine blood, Male, Mice, Mice, Inbred Strains, Prevotella melaninogenica, Bacteroides Infections veterinary, Cattle Diseases prevention & control, Ethylenediamines therapeutic use, Foot Rot prevention & control, Fusobacterium Infections veterinary
- Abstract
Ethylenediamine dihydriodide (EDDI) was administered by capsule and as a feed premix to cattle in 2 studies. In study I (32 steers), EDDI was given at 0, 12.5, 50, and 200 mg/animal each day and in study II (36 steers) at 0, 30, and 200 mg/animal each day. Serum iodine levels were monitored during the studies. The cattle were inoculated intradermally in the interdigital space with a mixture of Fusobacterium necrophorum and Bacteroides melaninogenicus to induce acute foot rot at day 15 (study I) or day 28 (study II) after EDDI administration was started. Lesions and lameness were evaluated 5 days after challenge exposure, using a subjective scoring system. The cattle receiving EDDI had significantly less severe lesions and lameness than control cattle in both studies (study I, P less than 0.003; study II, P less than 0.001). The results indicated that EDDI was efficacious in prevention of foot rot. The studies demonstrated a direct relationship between dosage levels of EDDI and serum iodine levels. However, at the large dosage level (200 mg) there were some individuals that showed an inability to metabolize and excrete the iodine as demonstrated by high serum iodine levels (600 to 700 micrograms of iodine/dl of serum).
- Published
- 1984
41. Iodine concentrations in milk of dairy cattle fed various amounts of iodine as ethylenediamine dihydroiodide.
- Author
-
Berg JN, Padgitt D, and McCarthy B
- Subjects
- Animals, Female, Iodine administration & dosage, Iodine blood, Iodine metabolism, Cattle metabolism, Diet, Ethylenediamines administration & dosage, Iodine analysis, Milk analysis
- Abstract
Due to concerns about high I in milk, the dairy industry has proposed a voluntary standard of 500 micrograms of I/L as the maximum allowable I in milk sold for processing and human consumption. This study was undertaken to determine the amount of ethylenediamine dihydroiodide that could be fed to dairy cattle without exceeding this standard. Various amounts (0 to 45 mg/head per d) of the I compound were fed to a commercial dairy herd for 50 wk. Individual and bulk milk samples were analyzed for total iodine. Milk I in herd bulk milk was directly correlated (r = .92) with the amounts fed. However, the correlation of milk I of individual cows was not as high (r = .66), indicating some individual variation in metabolism and secretion of the I into the mammary gland. Milk production and number of lactations did not correlate with I in milk. Regression analysis indicated that 25 to 30 mg of ethylenediamine dihydroiodide per day can be fed to dairy cattle receiving a diet otherwise low in I without exceeding a 500 micrograms concentration in milk.
- Published
- 1988
- Full Text
- View/download PDF
42. Clinical models for anaerobic bacterial infections in dogs and their use in testing the efficacy of clindamycin and lincomycin.
- Author
-
Berg JN, Scanlan CM, Buening GM, Fales WH, Schmidt DA, and Wilson JC
- Subjects
- Animals, Anti-Bacterial Agents administration & dosage, Anti-Bacterial Agents therapeutic use, Bacterial Infections drug therapy, Bacterial Infections microbiology, Clindamycin administration & dosage, Dogs, Dose-Response Relationship, Drug, Lincomycin administration & dosage, Mice, Bacteria, Anaerobic, Bacterial Infections veterinary, Clindamycin therapeutic use, Dog Diseases drug therapy, Lincomycin therapeutic use
- Abstract
Two canine models of clinical anaerobic bacterial infections were developed for the study of the clinical parameters associated with these infections and for evaluation of antimicrobial agents that might be useful in therapy. In model I, a mixed culture of Bacteroides fragilis, B melaninogenicus, and Fusobacterium necrophorum was used as the inoculum. In model II, a mixed culture of B fragilis and Clostridium perfringens combined with an infection enhancer (sterile cinder dust) was used as the inoculum. In both models, reproducible localized pyogenic or gangrenous infections were induced. Clinical signs of fever, depression, and leukocytosis with a left shift were present. A depression in the nonspecific cell-mediated immune response was noticed. The 2 models were used to evaluate clindamycin and lincomycin for therapy of anaerobic bacterial infections, using a subjective scoring system for severity of lesions and general clinical appearance. Clindamycin at dosage levels of 5.5 mg or 11 mg/kg of body weight, twice a day was highly efficacious in the treatment of anaerobic bacterial infections in both models. Dogs given lincomycin (22 mg/kg twice a day) responded to the treatment, but the response was less than that seen with clindamycin.
- Published
- 1984
43. Efficacy of ethylenediamine dihydriodide in the prevention of naturally occurring foot rot in cattle.
- Author
-
Maas J, Davis LE, Hempstead C, Berg JN, and Hoffman KA
- Subjects
- Animals, Cattle, Cattle Diseases microbiology, Cattle Diseases pathology, Female, Foot Rot microbiology, Foot Rot pathology, Fusobacterium necrophorum isolation & purification, Lameness, Animal, Male, Prevotella melaninogenica isolation & purification, Cattle Diseases prevention & control, Ethylenediamines therapeutic use, Foot Rot prevention & control
- Abstract
The efficacy of an ethylenediamine dihydriodide containing salt mixture was evaluated with regard to the prevention of naturally occurring foot rot in pastured cattle. Ninety-six cattle were assigned to the treatment group and 96 were assigned to the control group. The groups were allowed consumption of salt-mineral mixtures, ad libitum, that were identical, except with respect to iodine concentration. The control group's mixture contained 0.0025% iodine and the treatment group's mixture contained 0.125% iodine (0.156% ethylenediamine dihydriodide). The incidence of foot rot was measured, as was the severity of the lesions and accompanying lameness. The incidence of foot rot in the control group (20.8%) was significantly (P less than 0.05) greater than the incidence in the treatment group (8.3%). The severity of foot rot was greater (P = 0.024) in the control calves vs the treatment calves. Total serum iodine concentrations were measured in the 2 groups on days 0, 46, and 130 of the experiment. The serum iodine values of the treatment group on day 46 (46 +/- 19.8 g/dl) and day 130 (23 +/- 12.3 g/dl) were significantly different (P less than 0.01) than the serum iodine concentrations of the control animals and the pretreatment values (day 0) of both groups. Production was measured via calf weaning weights. There were no detectable differences between the 205-day adjusted weaning weights of the calves in the control group vs the calves in the treatment group. Clinical signs of iodism were not observed in the cattle involved in this study.
- Published
- 1984
44. Studies of Fusobacterium necrophorum from bovine hepatic abscesses: biotypes, quantitation, virulence, and antibiotic susceptibility.
- Author
-
Berg JN and Scanlan CM
- Subjects
- Animals, Anti-Bacterial Agents pharmacology, Anti-Bacterial Agents therapeutic use, Cattle, Cattle Diseases drug therapy, Endotoxins pharmacology, Fusobacterium Infections drug therapy, Fusobacterium Infections microbiology, Liver Abscess drug therapy, Liver Abscess microbiology, Rumen microbiology, Serotyping veterinary, Virulence, Cattle Diseases microbiology, Fusobacterium Infections veterinary, Fusobacterium necrophorum classification, Fusobacterium necrophorum drug effects, Fusobacterium necrophorum pathogenicity, Liver Abscess veterinary
- Abstract
Isolates of Fusobacterium necrophorum were obtained from 124 bovine hepatic abscesses (in 119 cattle) and from the ruminal contents of 12 cattle. Three biotypes (A, AB, and B) were found. Type A isolates were most common in hepatic abscesses, and type B isolates were most common in ruminal contents. Virulence studies in mice indicated that type A isolates were more pathogenic than types AB or B isolates. The difference in virulences between types A and B isolates was not related to the toxicity of the endotoxin. Results of serotesting (passive hemagglutination) showed that a wide heterogeneity existed between isolates. Minimal inhibitory concentrations of antibiotics for 12 of the isolates (7 type A, 1 type AB, and 4 type B) were as follows: less than or equal to 0.06 IU of penicillin G/ml; less than or equal to 0.5 micrograms of cephaloridine/ml; less than or equal to 2 micrograms of chloramphenicol/ml; less than or equal to 0.06 micrograms of clindamycin/ml; less than or equal to 8 micrograms of erythromycin/ml; less than or equal to 128 micrograms of gentamicin/ml; less than or equal to 0.25 micrograms of oxytetracycline/ml; and less than or equal to 4 micrograms of tylosin/ml.
- Published
- 1982
45. Identification of common antigens in ribosome-rich extracts from Fusobacterium necrophorum.
- Author
-
Berg JN and Evans JW
- Subjects
- Animals, Bacterial Vaccines immunology, Cattle, Cattle Diseases microbiology, Foot Rot microbiology, Fusobacterium necrophorum isolation & purification, Immunodiffusion, Liver Abscess microbiology, Liver Abscess veterinary, Microscopy, Electron, Rabbits, Ribosomes immunology, Sheep, Sheep Diseases microbiology, Antigens, Bacterial analysis, Fusobacterium necrophorum immunology
- Abstract
Ribosome-rich extracts (RRE) were prepared by differential and ultracentrifugation from 25 bovine and 6 ovine isolates of Fusobacterium necrophorum (FN) including both biotypes A and B. A pooled rabbit antiserum was prepared against whole-cell and sonicated whole-cell bacterins of F necrophorum isolate FN 3080, and a 2nd pooled rabbit antiserum was prepared against a RRE of FN 3080. The RRE of the 25 bovine isolates were tested against the FN 3080 whole-cell antiserum, using Ouchterlony double-immunodiffusion procedures. One to 3 precipitin lines were observed with the 25 isolates. The individual bovine isolates were found to have lines of identity with 5 to 21 of the other 24 isolates. The 25 bovine isolates and the 6 ovine isolates were then compared, using the FN 3080 RRE antiserum. One to 3 precipitin lines were observed for the 31 isolates with the RRE antiserum, and lines of identity were observed between all 31 of the isolates. These results indicated that common antigens are present in the RRE from a wide variety of F necrophorum isolates including both A and B biotypes.
- Published
- 1985
46. Endotoxemia following experimental intestinal strangulation obstruction in ponies.
- Author
-
Moore JN, White NA, Berg JN, Trim CM, and Garner HE
- Subjects
- Animals, Horses, Intestinal Obstruction blood, Jejunal Diseases blood, Limulus Test, Time Factors, Endotoxins blood, Horse Diseases blood, Intestinal Obstruction veterinary, Jejunal Diseases veterinary
- Abstract
Experimental small intestinal strangulation obstruction was produced in anesthetized ponies. The limulus amoebocyte lysate test demonstrated the presence of endotoxin in the general circulation 60 and 120 minutes following restoration of mesenteric blood flow. Mucosal degeneration, with loss of villus epithelial cells, was demonstrated coincident with endotoxemia. The findings were consistent with an ischemia-mediated alteration in the intestinal barrier to endotoxin.
- Published
- 1981
47. Comparative in vitro leukotoxin production of three bovine strains of Fusobacterium necrophorum.
- Author
-
Scanlan CM, Berg JN, and Fales WH
- Subjects
- Animals, Cattle, Endotoxins isolation & purification, Exotoxins isolation & purification, Fusobacterium necrophorum pathogenicity, Macrophages drug effects, Mice, Virulence, Exotoxins biosynthesis, Fusobacterium necrophorum metabolism
- Abstract
The in vitro leukotoxic activity of 3 bovine isolates of Fusobacterium necrophorum which varied in pathogenicity were compared. Monolayers of mouse peritoneal macrophages were exposed to culture filtrates from each F necrophorum strain, and cell viability was determined, using the trypan blue dye exclusion test. Two methods were used for production of the leukotoxin: (1) medium M-1 continuous dialysis sac cultures and (2) brain-heart infusion agar plate cultures. Supernatant cultural fluids containing the leukotoxin were subjected to membrane-partition chromatography, using ultrafilters with approximate molecular weight (mol wt) exclusion limits of 100,000, 10,000, 2,000, and 500. All ultrafiltrates had a cytotoxic effect on the monolayers. Cytotoxic activity was not found in the ultrafilter residues or in the control media ultrafiltrates. Comparative study of leukotoxin production indicated that F necrophorum 2101, type A, produced the most leukotoxin; F necrophorum 2030, type AB, produced slightly less leukotoxin; and F necrophorum 2035, type B, produced small amounts of leukotoxin. Endotoxin activity, as demonstrated by the mouse lethality test, was found in the residues of the XM-100A ultrafilter (100,000 mol wt), but not in the filtrates. Culture supernatant fluids and the XM-100A ultrafiltrates were positive for endotoxin, using the limulus amebocyte lysate assay; however, the other ultrafiltrates with lower mol wt exclusion limits were negative.
- Published
- 1982
48. Intracecal endotoxin and lactate during the onset of equine laminitis: a preliminary report.
- Author
-
Moore JN, Garner HE, Berg JN, and Sprouse RF
- Subjects
- Animals, Female, Foot Diseases etiology, Foot Diseases metabolism, Foot Diseases veterinary, Horse Diseases metabolism, Horses, Hydrogen-Ion Concentration, Limulus Test, Male, Cecum metabolism, Endotoxins analysis, Hoof and Claw, Horse Diseases etiology, Lactates metabolism
- Abstract
Cecal fluid from two adult horses was assayed by the limulus amebocyte lysate system for endotoxin before and after carbohydrate overload of the gastrointestinal tract. There were increases in cecal fluid endotoxin concentrations at the 3-, 6-, and 12-hour samplings when compared with base-line values. Concomitant cecal fluid lactate concentrations and pH values increased and decreased, respectively. Both horses subsequently developed clinical signs of acute laminitis.
- Published
- 1979
49. Biochemical characterization of the leukotoxins of three bovine strains of Fusobacterium necrophorum.
- Author
-
Scanlan CM, Berg JN, and Campbell FF
- Subjects
- Animals, Cattle, Cell Survival drug effects, Cells, Cultured, Culture Media, Exotoxins isolation & purification, Fusobacterium Infections microbiology, Fusobacterium necrophorum isolation & purification, Hydrogen-Ion Concentration, Kinetics, Macrophages drug effects, Mice, Temperature, Cattle Diseases microbiology, Exotoxins toxicity, Fusobacterium Infections veterinary, Fusobacterium necrophorum analysis, Macrophages cytology
- Abstract
The biochemical characteristics of the leukotoxins of 3 bovine isolates of Fusobacterium necrophorum which represent biotypes A, AB, and B were compared. Two methods were used for the production of the leukotoxins: medium M-1 continuous dialysis sac cultures and brain-heart infusion agar plate cultures. The supernatant cultural fluids were fractionated sequentially by membrane-partition chromatography, using ultrafilters with approximate molecular weight (mol wt) exclusion limits of 100,000, 10,000, 2,000, and 500. The ultrafiltrates (less than 500 mol wt) were fractionated by gel-permeation chromatography, using G-10 Sephadex. The leukotoxins of the 3 F necrophorum strains were estimated to have a molecular weight between 350 and 450. The leukotoxins in the ultrafiltrates (less than 500 mol wt) were stable at 60 C for 4 hours and at 100 C for 30 minutes, stable to extremes of pH (3 to 11), and stable to degradative enzymes including trypsin, protease, alpha-amylase, lipase, deoxyribonuclease, and ribonuclease. Significant differences were not observed in the biochemical characteristics of the leukotoxins produced in vitro by the 3 F necrophorum biotypes. These assays were done, using monolayers of mouse peritoneal macrophages. The monolayers were exposed to the 4 ultrafiltrates of both the continuous dialysis sac and brain-heart infusion agar cultures (pH 7.2) for 4 hours at 4 C, 25 C, and 37 C. Maximal cytotoxic activity in the assays was at 37 C.
- Published
- 1986
50. Fusobacterium necrophorum and Bacteroides melaninogenicus as etiologic agents of foot rot in cattle.
- Author
-
Berg JN and Loan RW
- Subjects
- Administration, Topical, Animals, Bacterial Infections microbiology, Bacterial Infections pathology, Bacteroides isolation & purification, Bacteroides Infections microbiology, Bacteroides Infections pathology, Bandages, Cattle, Cattle Diseases microbiology, Cattle Diseases pathology, Female, Foot microbiology, Foot Rot microbiology, Foot Rot pathology, Injections, Intradermal, Male, Bacterial Infections veterinary, Bacteroides Infections veterinary, Cattle Diseases etiology, Foot Rot etiology, Fusobacterium isolation & purification
- Abstract
Fusobacterium necrophorum (Sphaerophorus necrophorus) and Bacteroides melaninogenicus were the predominant bacteria isolated from biopsy specimens of lesions in cattle affected with foot rot. Mixed inoculums of the 2 bacteria, applied to the scarified interdigital skin or inoculated intradermally into the interdigital skin of test cattle, induced typical lesions of foot rot. Both bacteria were reisolated in large numbers from the induced lesions.
- Published
- 1975
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.