25 results on '"Berg, C.A.T. van den"'
Search Results
2. Towards real-time motion estimation for MR-guided radiotherapy: From MR-images to MR-MOTUS
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Berg, C.A.T. van den, Luijten, P.R., Sbrizzi, A., Huttinga, Niek Ricardo Ferdinand, Berg, C.A.T. van den, Luijten, P.R., Sbrizzi, A., and Huttinga, Niek Ricardo Ferdinand
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- 2023
3. Virtual Neurostimulation: Computer-aided transcranial magnetic stimulation (TMS) guidance and dosimetry
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Dijkhuizen, R.M., Neggers, S.F.W., Berg, C.A.T. van den, Petrov, Petar Ivanov, Dijkhuizen, R.M., Neggers, S.F.W., Berg, C.A.T. van den, and Petrov, Petar Ivanov
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- 2023
4. Real-time MRI-guided radiotherapy with deep learning
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Berg, C.A.T. van den, Lagendijk, J.J.W., Maspero, M., Terpstra, Maarten Lennart, Berg, C.A.T. van den, Lagendijk, J.J.W., Maspero, M., and Terpstra, Maarten Lennart
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- 2023
5. RF safety assessment in ultra-high field MRI: New approaches to reduce local SAR estimation errors
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Berg, C.A.T. van den, Luijten, P.R., Raaijmakers, A.J.E., Sbrizzi, A., Meliadò, Ettore Flavio, Berg, C.A.T. van den, Luijten, P.R., Raaijmakers, A.J.E., Sbrizzi, A., and Meliadò, Ettore Flavio
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- 2023
6. Activity-dependent spinal cord neuromodulation rapidly restores trunk and leg motor functions after complete paralysis
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Rowald, A., Komi, S., Demesmaeker, R., Baaklini, E., Hernandez-Charpak, S.D., Paoles, E., Montanaro, H., Cassara, A., Becce, F., Lloyd, B., Newton, T., Ravier, J., Kinany, N., D'Ercole, M., Paley, A., Hankov, N., Varescon, C., McCracken, L., Vat, M., Caban, M., Watrin, A., Jacquet, C., Bole-Feysot, L., Harte, Cathal, Lorach, H., Galvez, A., Tschopp, M., Herrmann, N., Wacker, M., Geernaert, L., Fodor, I., Radevich, V., Keybus, K. Van Den, Eberle, G., Pralong, E., Roulet, M., Ledoux, J.B., Fornari, E., Mandija, S., Mattera, L., Martuzzi, R., Nazarian, B., Benkler, S., Callegari, S., Greiner, N., Fuhrer, B., Froeling, M., Buse, N., Denison, T., Buschman, R., Wende, C., Ganty, D., Bakker, Jurriaan, Delattre, V., Lambert, H., Minassian, K., Berg, C.A.T. van den, Kavounoudias, A., Micera, S., Ville, D. Van De, Barraud, Q., Kurt, E., Kuster, N., Neufeld, E., Capogrosso, M., Asboth, L., Wagner, F.B., Bloch, J., Courtine, G., Rowald, A., Komi, S., Demesmaeker, R., Baaklini, E., Hernandez-Charpak, S.D., Paoles, E., Montanaro, H., Cassara, A., Becce, F., Lloyd, B., Newton, T., Ravier, J., Kinany, N., D'Ercole, M., Paley, A., Hankov, N., Varescon, C., McCracken, L., Vat, M., Caban, M., Watrin, A., Jacquet, C., Bole-Feysot, L., Harte, Cathal, Lorach, H., Galvez, A., Tschopp, M., Herrmann, N., Wacker, M., Geernaert, L., Fodor, I., Radevich, V., Keybus, K. Van Den, Eberle, G., Pralong, E., Roulet, M., Ledoux, J.B., Fornari, E., Mandija, S., Mattera, L., Martuzzi, R., Nazarian, B., Benkler, S., Callegari, S., Greiner, N., Fuhrer, B., Froeling, M., Buse, N., Denison, T., Buschman, R., Wende, C., Ganty, D., Bakker, Jurriaan, Delattre, V., Lambert, H., Minassian, K., Berg, C.A.T. van den, Kavounoudias, A., Micera, S., Ville, D. Van De, Barraud, Q., Kurt, E., Kuster, N., Neufeld, E., Capogrosso, M., Asboth, L., Wagner, F.B., Bloch, J., and Courtine, G.
- Abstract
Item does not contain fulltext, Epidural electrical stimulation (EES) targeting the dorsal roots of lumbosacral segments restores walking in people with spinal cord injury (SCI). However, EES is delivered with multielectrode paddle leads that were originally designed to target the dorsal column of the spinal cord. Here, we hypothesized that an arrangement of electrodes targeting the ensemble of dorsal roots involved in leg and trunk movements would result in superior efficacy, restoring more diverse motor activities after the most severe SCI. To test this hypothesis, we established a computational framework that informed the optimal arrangement of electrodes on a new paddle lead and guided its neurosurgical positioning. We also developed software supporting the rapid configuration of activity-specific stimulation programs that reproduced the natural activation of motor neurons underlying each activity. We tested these neurotechnologies in three individuals with complete sensorimotor paralysis as part of an ongoing clinical trial ( www.clinicaltrials.gov identifier NCT02936453). Within a single day, activity-specific stimulation programs enabled these three individuals to stand, walk, cycle, swim and control trunk movements. Neurorehabilitation mediated sufficient improvement to restore these activities in community settings, opening a realistic path to support everyday mobility with EES in people with SCI.
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- 2022
7. See without being seen: Novel, radiolucent MRI receive arrays for MR-linac and PET/MRI
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Berg, C.A.T. van den, Lagendijk, J.J.W., Tijssen, H.N., Zijlema, Stefan Emiel, Berg, C.A.T. van den, Lagendijk, J.J.W., Tijssen, H.N., and Zijlema, Stefan Emiel
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- 2022
8. Blood pressure during endovascular treatment under conscious sedation or local anesthesia
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Samuels, N., Graaf, R.A. van de, Berg, C.A.T. van den, Nieboer, D., Eralp, I., Treurniet, K.M., Emmer, B.J., Immink, R.V., Majoie, C., Zwam, W.H. van, Bokkers, R.P., Uyttenboogaart, M., Hasselt, B. van, Muhling, J., Burke, J.F., Roozenbeek, B., Lugt, A. van der, Dippel, D.W., Jenniskens, S.F.M., Boogaarts, H.D., Dijk, E.J. van, Lingsma, H.F., Es, A. van, ACS - Atherosclerosis & ischemic syndromes, ACS - Microcirculation, Radiology and Nuclear Medicine, ACS - Diabetes & metabolism, Anesthesiology, Basic and Translational Research and Imaging Methodology Development in Groningen (BRIDGE), Beeldvorming, MUMC+: DA BV Medisch Specialisten Radiologie (9), RS: Carim - B05 Cerebral small vessel disease, RS: Carim - B06 Imaging, Neurology, Radiology & Nuclear Medicine, and Public Health
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Intraoperative Neurophysiological Monitoring ,Vascular damage Radboud Institute for Health Sciences [Radboudumc 16] ,Conscious Sedation ,Blood Pressure ,THERAPY ,Brain Ischemia ,0302 clinical medicine ,Modified Rankin Scale ,Local anesthesia ,Prospective Studies ,Registries ,ACUTE ISCHEMIC-STROKE ,030212 general & internal medicine ,Prospective cohort study ,Netherlands ,OUTCOMES ,STATEMENT ,Endovascular Procedures ,THROMBECTOMY ,Disorders of movement Donders Center for Medical Neuroscience [Radboudumc 3] ,3. Good health ,Anesthesia ,medicine.symptom ,Mean arterial pressure ,Sedation ,Clinical Neurology ,Article ,Healthcare improvement science Radboud Institute for Health Sciences [Radboudumc 18] ,EVENTS ,GENERAL-ANESTHESIA ,03 medical and health sciences ,MANAGEMENT ,medicine ,Humans ,Endovascular treatment ,Ischemic Stroke ,INTRAOPERATIVE HYPOTENSION ,business.industry ,Other Research Radboud Institute for Health Sciences [Radboudumc 0] ,Odds ratio ,CARE ,Confidence interval ,Blood pressure ,Anesthetic ,Ischemic stroke ,Neurology (clinical) ,business ,030217 neurology & neurosurgery ,Anesthesia, Local - Abstract
ObjectiveTo evaluate the role of blood pressure as mediator of the effect of conscious sedation (CS) compared to local anesthesia (LA) on functional outcome after EVT.MethodsPatients treated in MR CLEAN Registry centers with CS or LA as preferred anesthetic approach during EVT for ischemic stroke were analyzed. First, we evaluated the effect of CS on area under the threshold (AUT), relative difference between baseline and lowest procedural mean arterial pressure (∆LMAP) and procedural blood pressure trend, compared to LA. Second, we assessed the association between blood pressure and functional outcome (modified Rankin Scale, mRS) with multivariable regression. Lastly, we evaluated whether blood pressure explained the effect of CS on mRS.ResultsIn 440 patients with available blood pressure data, patients treated under CS (n = 262) had larger AUTs (median 228 vs 23 mm Hg*min), larger ∆LMAP (median 16% vs 6%) and a more negative blood pressure trend (−0.22 vs −0.08 mm Hg/min) compared to LA (n = 178). Larger ∆LMAP and AUTs were associated with worse mRS (adjusted common OR (acOR) per 10%-drop 0.87, 95%CI 0.78–0.97, and acOR per 300 mm Hg*min 0.89, 95%CI 0.82–0.97). Patients treated under CS had worse mRS compared to LA (acOR 0.59, 95%CI 0.40–0.87) and this association remained when adjusting for ∆LMAP and AUT (acOR 0.62, 95%CI0.42–0.92).ConclusionsLarge blood pressure drops are associated with worse functional outcome. However, blood pressure drops do not explain the worse outcomes in the CS group.
- Published
- 2021
9. Phantom-based quality assurance for multicenter quantitative MRI in locally advanced cervical cancer
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Houdt, P.J. van, Kallehauge, J.F., Tanderup, K., Nout, R., Zaletelj, M., Tadic, T., Kesteren, Z.J. van, Berg, C.A.T. van den, Georg, D., Cote, J.C., Levesque, I.R., Swamidas, J., Malinen, E., Telliskivi, S., Brynolfsson, P., Mahmood, F., Heide, U.A. van der, Embrace Collaborative Grp, CCA - Imaging and biomarkers, and Radiotherapy
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Uterine cervical neoplasms ,Imaging biomarker ,Uterine Cervical Neoplasms ,Imaging phantom ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Magnetic resonance imaging ,Multicenter trial ,Medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Protocol (science) ,Reproducibility ,medicine.diagnostic_test ,Radiotherapy ,business.industry ,Phantoms, Imaging ,Reproducibility of Results ,Hematology ,Repeatability ,Magnetic Resonance Imaging ,Diffusion Magnetic Resonance Imaging ,Oncology ,030220 oncology & carcinogenesis ,Female ,business ,Nuclear medicine ,Quality assurance - Abstract
Background and purpose: A wide variation of MRI systems is a challenge in multicenter imaging biomarker studies as it adds variation in quantitative MRI values. The aim of this study was to design and test a quality assurance (QA) framework based on phantom measurements, for the quantitative MRI protocols of a multicenter imaging biomarker trial of locally advanced cervical cancer.Materials and methods: Fifteen institutes participated (five 1.5 T and ten 3 T scanners). Each institute optimized protocols for T2, diffusion-weighted imaging, T1, and dynamic contrast-enhanced (DCE-)MRI according to system possibilities, institutional preferences and study-specific constraints. Calibration phantoms with known values were used for validation. Benchmark protocols, similar on all systems, were used to investigate whether differences resulted from variations in institutional protocols or from system variations. Bias, repeatability (%RC), and reproducibility (%RDC) were determined. Ratios were used for T2 and T1 values.Results: The institutional protocols showed a range in bias of 0.88-0.98 for T2 (median %RC = 1%; % RDC = 12%), -0.007 to 0.029 x 10(-3) mm(2)/s for the apparent diffusion coefficient (median %RC = 3%; % RDC = 18%), and 0.39-1.29 for T1 (median %RC = 1%; %RDC = 33%). For DCE a nonlinear vendor-specific relation was observed between measured and true concentrations with magnitude data, whereas the relation was linear when phase data was used.Conclusion: We designed a QA framework for quantitative MRI protocols and demonstrated for a multi-center trial for cervical cancer that measurement of consistent T2 and apparent diffusion coefficient values is feasible despite protocol differences. For DCE-MRI and T1 mapping with the variable flip angle method, this was more challenging. (C) 2020 The Authors. Published by Elsevier B.V.
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- 2020
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10. Technical developments for quantitative and motion resolved MR-guided radiotherapy
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Lagendijk, J.J.W., Berg, C.A.T. van den, Tijssen, H.N., Sbrizzi, A., Bruijnen, Tom, Lagendijk, J.J.W., Berg, C.A.T. van den, Tijssen, H.N., Sbrizzi, A., and Bruijnen, Tom
- Published
- 2021
11. Clinical value of (dedicated) 3 Tesla and 7 Tesla MRI for cT1 glottic carcinoma
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Egmond, S.L. van, Vonck, B.M.D., Bluemink, J.J., Pameijer, F.A., Dankbaar, J.W., Stegeman, I., Philippens, M.E.P., Berg, C.A.T. van den, Janssen, L.M., and Terhaard, C.H.
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7 Tesla ,magnetic resonance imaging ,3 Tesla ,MRI ,early glottic cancer - Abstract
Objective To assess the feasibility of the clinical use of 3 Tesla and 7 Tesla Magnetic Resonance Imaging for early (cT1) glottic carcinoma, including structural assessment of technical image quality and visibility of the tumor; and if feasible, to correlate MRI findings to routine diagnostics. Methods Prospective feasibility study. Twenty patients with primary clinical T1 glottic carcinoma underwent both routine clinical staging and CT. In addition, a 3 T and 7 T MRI protocol, developed for small laryngeal lesions, was performed in a 4-point immobilization mask, using dedicated surface coils. Afterwards, routine endoscopic direct suspension laryngoscopy under general anaesthesia was performed. Results Only 2 of 7 (29%) of 7 T MRI scans were rated as moderate to good technical image quality. After exclusion of three patients with only mild to moderate dysplasia at the time of MRI, 13 of 17 (76%) of 3 T MRIs were of adequate technical image quality. Tumor visualization was adequate in 8 of 13 (62%) of patients with invasive squamous cell carcinomas. With exclusion of the four MRIs with motion artefacts, the tumor and its boundaries could be adequately seen in 8 of 9 (89%) patients with squamous cell carcinoma versus only one in four (25%) of patients with carcinoma in situ lesions. Conclusions 7 Tesla MRI was considered not feasible. 3 Tesla MRI, with adequate patient selection, namely clinical exclusion of patients with a history of claustrophobia and inclusion of only histologically proven invasive squamous cell carcinoma, can be feasible. Especially with further improvement of MR image q
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- 2019
12. Dosimetric impact of soft-tissue based intrafraction motion from 3D cine-MR in prostate SBRT
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Muinck-Keizer, D.M. de, Kontaxis, C., Kerkmeijer, L.G.W., Voorst-van Zyp, J.R.N. van der, Berg, C.A.T. van den, Raaymakers, B.W., Lagendijk, J.J., Boer, J.C. den, Muinck-Keizer, D.M. de, Kontaxis, C., Kerkmeijer, L.G.W., Voorst-van Zyp, J.R.N. van der, Berg, C.A.T. van den, Raaymakers, B.W., Lagendijk, J.J., and Boer, J.C. den
- Abstract
Item does not contain fulltext, To investigate the dosimetric impact of intrafraction translation and rotation motion of the prostate, as extracted from daily acquired post-treatment 3D cine-MR based on soft-tissue contrast, in extremely hypofractionated (SBRT) prostate patients. Accurate dose reconstruction is performed by using a prostate intrafraction motion trace which is obtained with a soft-tissue based rigid registration method on 3D cine-MR dynamics with a temporal resolution of 11 s. The recorded motion of each time-point was applied to the planning CT, resulting in the respective dynamic volume used for dose calculation. For each treatment fraction, the treatment delivery record was generated by proportionally splitting the plan into 11 s intervals based on the delivered monitor units. For each fraction the doses of all partial plan/dynamic volume combinations were calculated and were summed to lead to the motion-affected fraction dose. Finally, for each patient the five fraction doses were summed, yielding the total treatment dose. Both daily and total doses were compared to the original reference dose of the respective patient to assess the impact of the intrafraction motion. Depending on the underlying motion of the prostate, different types of motion-affected dose distributions were observed. The planning target volumes (PTVs) ensured CTV_30 (seminal vesicles) D99% coverage for all patients, CTV_35 (prostate corpus) coverage for 97% of the patients and GTV_50 (local boost) for 83% of the patients when compared against the strict planning target D99% value. The dosimetric impact due to prostate intrafraction motion in extremely hypofractionated treatments was determined. The presented study is an essential step towards establishing the actual delivered dose to the patient during radiotherapy fractions.
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- 2020
13. Deep learning-based MR-to-CT synthesis: The influence of varying gradient echo-based MR images as input channels
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Florkow, M.C., Zijlstra, F., Willemsen, K., Maspero, M., Berg, C.A.T. van den, Kerkmeijer, L.G.W., Castelein, R.M., Weinans, H., Viergever, M.A., Stralen, M. van, Seevinck, P.R., Florkow, M.C., Zijlstra, F., Willemsen, K., Maspero, M., Berg, C.A.T. van den, Kerkmeijer, L.G.W., Castelein, R.M., Weinans, H., Viergever, M.A., Stralen, M. van, and Seevinck, P.R.
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Contains fulltext : 219835.pdf (Publisher’s version ) (Open Access), PURPOSE: To study the influence of gradient echo-based contrasts as input channels to a 3D patch-based neural network trained for synthetic CT (sCT) generation in canine and human populations. METHODS: Magnetic resonance images and CT scans of human and canine pelvic regions were acquired and paired using nonrigid registration. Magnitude MR images and Dixon reconstructed water, fat, in-phase and opposed-phase images were obtained from a single T1 -weighted multi-echo gradient-echo acquisition. From this set, 6 input configurations were defined, each containing 1 to 4 MR images regarded as input channels. For each configuration, a UNet-derived deep learning model was trained for synthetic CT generation. Reconstructed Hounsfield unit maps were evaluated with peak SNR, mean absolute error, and mean error. Dice similarity coefficient and surface distance maps assessed the geometric fidelity of bones. Repeatability was estimated by replicating the training up to 10 times. RESULTS: Seventeen canines and 23 human subjects were included in the study. Performance and repeatability of single-channel models were dependent on the TE-related water-fat interference with variations of up to 17% in mean absolute error, and variations of up to 28% specifically in bones. Repeatability, Dice similarity coefficient, and mean absolute error were statistically significantly better in multichannel models with mean absolute error ranging from 33 to 40 Hounsfield units in humans and from 35 to 47 Hounsfield units in canines. CONCLUSION: Significant differences in performance and robustness of deep learning models for synthetic CT generation were observed depending on the input. In-phase images outperformed opposed-phase images, and Dixon reconstructed multichannel inputs outperformed single-channel inputs.
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- 2020
14. MRI safety of implants: transfer function determination from MR images
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Luijten, P.R., Berg, C.A.T. van den, Raaijmakers, A.J.E., Tokaya, Janot Philippe, Luijten, P.R., Berg, C.A.T. van den, Raaijmakers, A.J.E., and Tokaya, Janot Philippe
- Published
- 2020
15. Visualization of gold fiducial markers in the prostate using phase-cycled bSSFP imaging for MRI-only radiotherapy
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Shcherbakova, Y., Bartels, L.W., Mandija, S., Beld, E., Seevinck, P.R., Voort van Zyp, J.R.N. van der, Kerkmeijer, L.G.W., Moonen, C.T., Lagendijk, J.J., Berg, C.A.T. van den, Shcherbakova, Y., Bartels, L.W., Mandija, S., Beld, E., Seevinck, P.R., Voort van Zyp, J.R.N. van der, Kerkmeijer, L.G.W., Moonen, C.T., Lagendijk, J.J., and Berg, C.A.T. van den
- Abstract
Contains fulltext : 215740.pdf (publisher's version ) (Open Access), In this work, we present a new method for visualization of fiducial markers (FMs) in the prostate for MRI-only radiotherapy with a positive contrast directly at the MR console. The method is based on high bandwidth phase-cycled balanced steady-state free precession (bSSFP) sequence, which is available on many clinical scanners, does not require any additional post-processing or software, and has a higher signal-to-noise (SNR) compared to conventional gradient-echo (GE) imaging. Complex phase-cycled bSSFP data is acquired with different RF phase increment settings such that the manifestation of the artifacts around FMs in the acquired complex images is different for each dynamic acquisition and depends on the RF phase increment used. First, we performed numerical simulations to investigate the complex-valued phase-cycled bSSFP signal in the presence of a gold FM, and to investigate the relation of the true physical location of the FM with the geometrical manifestation of the artifacts. Next, to validate the simulations, we performed phantoms and in vivo studies and compared the experimentally obtained artifacts with those predicted in simulations. The accuracy of the method was assessed by comparing the distances between the FM's centers and the center of mass of FMs system measured using phase-cycled bSSFP MR images and using reference CT (or MRI-only) images. The results show accurate (within 1 mm) matching of FMs localization between CT and MR images on five patients, proving the feasibility of in vivo FMs detection on MR images only. The FMs show a positive contrast with respect to the prostate background on real/imaginary phase-cycled bSSFP images, which was confirmed by simulations. The proposed method facilitates robust FMs visualization with positive contrast directly at the MR console, allowing RT technicians to obtain immediate feedback on the anticipated feasibility of accurate FMs localization while the patient is being scanned.
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- 2019
16. Fiducial marker based intra-fraction motion assessment on cine-MR for MR-linac treatment of prostate cancer
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Muinck Keizer, D.M.D. de, Pathmanathan, A.U., Andreychenko, A., Kerkmeijer, L.G.W., Voort van Zyp, J.R.N. van der, Tree, A.C., Berg, C.A.T. van den, Boer, J.C.J. de, Muinck Keizer, D.M.D. de, Pathmanathan, A.U., Andreychenko, A., Kerkmeijer, L.G.W., Voort van Zyp, J.R.N. van der, Tree, A.C., Berg, C.A.T. van den, and Boer, J.C.J. de
- Abstract
Item does not contain fulltext, We have developed a method to determine intrafraction motion of the prostate through automatic fiducial marker (FM) tracking on 3D cine-magnetic resonance (MR) images with high spatial and temporal resolution. Twenty-nine patients undergoing prostate stereotactic body radiotherapy (SBRT), with four implanted cylindrical gold FMs, had cine-MR imaging sessions after each of five weekly fractions. Each cine-MR examination consisted of 55 sequentially obtained 3D datasets ('dynamics'), acquired over a 11 s period, covering a total of 10 min. FM locations in the first dynamic were manually identified by a clinician, FM centers in subsequent dynamics were automatically determined. Center of mass (COM) translations and rotations were determined by calculating the rigid transformations between the FM template of the first and subsequent dynamics. The algorithm was applied to 7315 dynamics over 133 scans of 29 patients and the obtained results were validated by comparing the COM locations recorded by the clinician at the halfway-dynamic (after 5 min) and end dynamic (after 10 min). The mean COM translations at 10 min were X: 0.0 [Formula: see text] 0.8 mm, Y: 1.0 [Formula: see text] 1.9 mm and Z: 0.9 [Formula: see text] 2.0 mm. The mean rotation results at 10 min were X: 0.1 [Formula: see text] 3.9 degrees , Y: 0.0 [Formula: see text] 1.3 degrees and Z: 0.1 [Formula: see text] 1.2 degrees . The tracking success rate was 97.7% with a mean 3D COM error of 1.1 mm. We have developed a robust, fast and accurate FM tracking algorithm for cine-MR data, which allows for continuous monitoring of prostate motion during MR-guided radiotherapy (MRgRT). These results will be used to validate automatic prostate tracking based on soft-tissue contrast.
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- 2019
17. Soft-tissue prostate intrafraction motion tracking in 3D cine-MR for MR-guided radiotherapy
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Keizer, D.M. de Muinck, Kerkmeijer, L.G.W., Maspero, M., Andreychenko, A., Voort van Zyp, J.R.N. van der, Berg, C.A.T. van den, Raaymakers, B.W., Lagendijk, J.J., Boer, J.C. den, Keizer, D.M. de Muinck, Kerkmeijer, L.G.W., Maspero, M., Andreychenko, A., Voort van Zyp, J.R.N. van der, Berg, C.A.T. van den, Raaymakers, B.W., Lagendijk, J.J., and Boer, J.C. den
- Abstract
Item does not contain fulltext, To develop a method to automatically determine intrafraction motion of the prostate based on soft tissue contrast on 3D cine-magnetic resonance (MR) images with high spatial and temporal resolution. Twenty-nine patients who underwent prostate stereotactic body radiotherapy (SBRT), with four implanted cylindrical gold fiducial markers (FMs), had cine-MR imaging sessions after each of five weekly fractions. Each cine-MR session consisted of 55 sequentially obtained 3D data sets ('dynamics') and was acquired over an 11 s period, covering a total of 10 min. The prostate was delineated on the first dynamic of every dataset and this delineation was used as the starting position for the soft tissue tracking (SST). Each subsequent dynamic was rigidly aligned to the first dynamic, based on the contrast of the prostate. The obtained translation and rotation describes the intrafraction motion of the prostate. The algorithm was applied to 6270 dynamics over 114 scans of 29 patients and the results were validated by comparing to previously obtained fiducial marker tracking data of the same dataset. Our proposed tracking method was also retro-perspectively applied to cine-MR images acquired during MR-guided radiotherapy of our first prostate patient treated on the MR-Linac. The difference in the 3D translation results between the soft tissue and marker tracking was below 1 mm for 98.2% of the time. The mean translation at 10 min were X: 0.0 [Formula: see text] 0.8 mm, Y: 1.0 [Formula: see text] 1.8 mm and Z: [Formula: see text] mm. The mean rotation results at 10 min were X: [Formula: see text], Y: 0.1 [Formula: see text] 0.6 degrees and Z: 0.0 [Formula: see text] 0.7 degrees . A fast, robust and accurate SST algorithm was developed which obviates the need for FMs during MR-guided prostate radiotherapy. To our knowledge, this is the first data using full 3D cine-MR images for real-time soft tissue prostate tracking, which is validated against previously obtained marker tracking d
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- 2019
18. Assessment of RF heating by MR-based measurements and models
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Lagendijk, J.J.W., Berg, C.A.T. van den, Simonis, F.F.J., Lagendijk, J.J.W., Berg, C.A.T. van den, and Simonis, F.F.J.
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- 2016
19. Phase-based Arterial Input Function Measurements in the Femoral Arteries for Quantification of Dynamic Contrast-enhanced (DCE) MRI and Comparison With DCE-CT
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Korporaal, J.G., Berg, C.A.T. van den, Osch, M.J.P. van, Groenendaal, G., Vulpen, M. van, and Heide, U.A. van der
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arterial input function ,dynamic contrast enhanced (DCE) MRI ,prostate cancer ,phase signal - Published
- 2011
20. Radiofrequency fields in hyperthermia and MRI : Exploiting their similarities for mutual benefit
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Berg, C.A.T. van den and University Utrecht
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Geneeskunde ,MR transmit coil ,electromagnetic modelling ,radiofrequency fields ,RF safety ,thermal modelling ,hyperthermia ,B1+ imaging ,MRI ,SAR - Abstract
Hyperthermia treatment planning aims to calculate and optimize the thermal dose of hyperthermia treatments for individual patient cases. For this purpose extensive electromagnetic and thermal modelling techniques have been successfully developed over the last years. Unfortunately, means to monitor and verify a pre-calculated treatment plan during treatment are limited. MR imaging is an excellent imaging modality to visualize anatomy and physiology. As field strengths increase, problems with respect to greater RF field inhomogeneities and elevated RF power deposition pose technical challenges. This thesis demonstrates that hyperthermia treatment planning can be verified with MR imaging and that MR imaging can be optimized with hyperthermia treatment planning.
- Published
- 2006
21. Towards real-time motion estimation for MR-guided radiotherapy: From MR-images to MR-MOTUS
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Huttinga, Niek Ricardo Ferdinand, Berg, C.A.T. van den, Luijten, P.R., and Sbrizzi, A.
- Subjects
MR-linac ,Magnetic Resonance Imaging ,Real-time adaptive MR-guided radiotherapy ,3D motion estimation ,Spatio-temporal motion-field reconstruction ,Low-rank motion model ,Real-time reconstructions ,Gaussian Processes ,Estimation uncertainty - Abstract
The ultimate potential of the MR-linac is real-time adaptive MR-guided radiotherapy (aMRgRT), i.e. adapt the radiation plan in real-time according to real-time 3D motion estimates. One of the major technical roadblocks towards achieving this goal is the real-time 3D motion estimation. This thesis presents two new approaches in this context. The main method is called MR-MOTUS and is the subject of Chapters 2-4. All methods in this thesis are motivated by the observation that internal body motion exhibits a high level of spatio-temporal correlation, and could be reconstructed from minimal MRI-data that can be acquired in real-time. Chapter 2 demonstrates the proof of concept. The MR-MOTUS signal model was derived that explicitly relates motion-fields and a reference image to k-space data, and the minimization problem was formulated to reconstruct these motion-fields from the data. The proof-of-concept was demonstrated by reconstructions of in vivo 3D rigid head motion and 3D non-rigid respiratory motion from retrospectively highly undersampled k-space data, and 2D non-rigid respiratory motion-field reconstruction on prospectively undersampled data. Chapter 3 introduces several improvements to tighten the gap towards clinical application, and extends the framework to 3D+t spatio-temporal motion-field reconstructions by introducing a low-rank motion model, which naturally separates motion-fields into two components: a spatial component, and a temporal component. This model reduced the number of unknowns for space-time motion-fields by two orders of magnitude, and thereby enabled 3D+t motion-field reconstruction with high temporal resolution on a desktop PC. However, just high temporal resolution is not sufficient; the reconstructions also need to be available in real-time during the treatments. In Chapter 4, the previous reconstructions were therefore extended to real-time reconstructions at 6.7 Hz using a two-step approach, which leverages the low-rank separation of motion-fields into spatial and temporal components. In the first phase, the spatial component is assumed to be fixed in time over several minutes and is reconstructed with an offline reconstruction. In the second phase, the temporal component that encodes the dynamics in the motion-field is reconstructed per dynamic in an online reconstruction. The main rationale behind this approach is that the temporal component has few degrees of freedom (
- Published
- 2023
22. See without being seen: Novel, radiolucent MRI receive arrays for MR-linac and PET/MRI
- Author
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Zijlema, Stefan Emiel, Berg, C.A.T. van den, Lagendijk, J.J.W., Tijssen, H.N., and University Utrecht
- Subjects
MR-linac ,MRI-guided radiotherapy ,radiolucent ,receive array ,high impedance coils ,PET/MRI ,attenuation correction - Abstract
The MR-linac combines an MRI scanner with a radiotherapy treatment device and enables the visualization of a patient’s anatomy while the treatment is delivered (MRI-guided radiotherapy). However, MRI receive arrays, which pick up the MRI signals, are traditionally not compatible with MRI-guided radiotherapy, as the arrays block too much of the radiation beam. Therefore, special, radiation transparent receive arrays have been developed, which barely attenuate radiation by moving all electronics out of the beam’s path. Unfortunately, the MRI performance of these arrays is lower than that of the conventional arrays. In this thesis, multiple radiation transparent receive arrays have therefore been developed and manufactured to improve the image quality and acquisition speed with respect to the current clinical receive arrays, while barely attenuating radiation. The improved performance can be used to reduce treatment times or to make (real-time) treatment adaptations based on the MR images. Additionally, this thesis has shown that aforementioned receive arrays can be used for hybrid PET/MRI as well. Here, the radiation transparency is required to avoid PET signal absorption by the array and thereby disturbing the PET image reconstruction.
- Published
- 2022
23. MRI safety of implants: transfer function determination from MR images
- Author
-
Tokaya, Janot Philippe, Luijten, P.R., Berg, C.A.T. van den, Raaijmakers, A.J.E., University Utrecht, Luijten, Peter R, van den Berg, CAT, and Raaijmakers, AJE
- Subjects
implantaten ,EM simulaties ,RF ,transfer matrix ,veiligheid ,transfer functie ,MRI - Abstract
MRI is often considered to be a risk for patients with medical implants, like pacemakers and deep brain stimulators. The heating around the electrodes of these type of implants that are in contact with human tissue to deliver therapeutic doses is one of the most notorious challenges. Unintendedly, the implants can act as antennas and pick up energy from the radiofrequency field that is necessary to produce MR images and deposit it locally causing focused temperature hot spots. This process is described by the so-called transfer function of an implant. It is challenging to get an accurate estimate of the heating around the electrodes because it depends on many factors. The design of the implant, the anatomy of the patient, the type of RF coil, the relative positions of the implant, the patient and the RF coil all influence the heating. As shown in this thesis MRI can be used to measure the transfer function of an implant and hence get an accurate description of its interaction with the radio frequency field in more realistic scenarios. Nowadays transfer functions can only be measured in phantoms in straight trajectories in dedicated measurements setups. Translating these transfer functions to in-vivo situations introduce currently unknown uncertainties which can be probed using the MRI methods described in this thesis. This provides options for implant manufacturers to describe their products better and has the potential to improve care for an increasing patient population.
- Published
- 2020
24. Novel transmitter designs for magnetic resonance imaging
- Author
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Aussenhofer, S.A., Webb, A.G., Boernert, P., Berg, C.A.T. van den, Dankelman, J, Nederveen, A.J., and Leiden University
- Subjects
Plasma ,Dielectric resonators ,Magentic resonance imaging ,Transmitter - Abstract
In this thesis novel transmitter designs for human magnetic resonance imaging for high static magnetic field strengths (7 Tesla) were developed. The theory for both dielectric resonators as well as plasma based resonators have been described in the introduction and outline. It was shown that by using empirically derived formulas and computer simulations dielectric resonators can be designed also by using water as a dielectric (chapter 2). In chapter 3 it was shown that alternative dielectric materials, especially high dielectric materials can be used instead of water. Chapter 4 shows the advanced usage of the technology developed in chapter 2 and chapter 3. Here an array for human cardiac magnetic resonance imaging at 7 Tesla field strength was designed and constructed. In chapter 5 a first practical design for a plasma based transmit coil for magnetic resonance imaging was demonstrated. It was shown that it is possible to guide a surface wave via the plasma sheath within the magnetic resonance imaging system. The thesis ends with chapter 6 a general discussion and an outlook to possible future developments.
- Published
- 2018
25. Assessment of RF heating by MR-based measurements and models
- Author
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Simonis, F.F.J., Lagendijk, J.J.W., Berg, C.A.T. van den, and University Utrecht
- Subjects
safety ,radiofrequency ,heating ,modeling ,measurements ,MRI - Abstract
RF transmit signals are an inherent part of MRI that is crucial for spin excitation. Current developments in MRI are moving towards higher magnetic field strengths and more transmit coils leading to more inhomogeneous RF distributions. This increases the possibility of SAR hotspots, creating higher risks of local heating. In order to cope with these developments and still perform reliable safety assessments the MRI safety community is discussing to revise the guidelines on RF induced tissue heating. Instead of restricting the scanners on a derived measure, i.e. SAR, the scanners should be limited by the guidelines that are direct measures for tissue damage such as absolute temperature. In this debate the translation from SAR to temperature estimations is crucial. In order to make this translation thermal modeling is required. In this thesis MR-based methods were developed in order to measure the influence of RF exposure in human subjects, both in temperature and perfusion. Those results could subsequently be used to test whether current thermal modeling was able to predict those effects for a given subject. In vivo temperature measurements in the calf resulted in precise representations of the heating that could be used as a reliable gold standard. Furthermore, perfusion increases over the complete leg due to this local temperature increase could be observed. Although the simulations matched with the experiments in the EM regime, the accuracy of the estimated temperature distributions was not sufficient for a safety assessment. This showed that more work on thermal modeling is required before MRI scanners can be restricted on measures based on temperature. Therefore it would be unwise to immediately discard all SAR related restrictions. Local SAR still proved to be a very useful restrictive measure since it can be quickly determined by simulations and can more easily be verified. Correct thermal modeling proved to rely on inputs that are not easily measured such as subject specific thermoregulation. Although the first steps in this direction were made in this thesis, obtaining a proper estimate of thermal behavior over the whole human body is a highly challenging pursuit.
- Published
- 2016
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