62 results on '"Berdien B"'
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2. From ‘lawyer’ to ‘superlawyer’: making law accessible for everyone
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van der Donk, Berdien B E, Kornelius, Willemijn Hermelinde, van der Donk, Berdien B E, and Kornelius, Willemijn Hermelinde
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- 2022
3. Circumventing ambiguous qualifications and national discrepancies: a European roadmap to define social media platforms
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van der Donk, Berdien B E and van der Donk, Berdien B E
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Can a large-scale social media platform decide to block access to legal content? The question on who gets to decide what content can and what content cannot be posted on social media platforms is closely intertwined with the question what social media platforms are and how they fit into the existing legal framework. However, consensus on the definition of social media platforms has not (yet) been achieved - neither in the academic literature nor in legal practice. This article demonstrates how subtle differences in the definition of social media platforms have led to an incoherent European system to address content restrictions on social media platforms. Departing from the definition of social media platforms in three European Member States (Denmark, Germany, and the Netherlands), the article uncovers that, recently, national courts have taken a normative stance on the definition of social media platforms. However, the definitions differ from one Member State to another, creating a patchwork of applicable laws across the European Union. Following this contextualization in European national case-law, the article continues with a literature review to summarizes the various views on the qualification of online platforms in the literature. The study uncovers six main qualifications: services of general interest, universal services, essential facilities, publicly owned public spaces, privately owned public spaces, and public spheres. Subsequently, the author assesses the viability of these different qualifications and concludes that social media platforms cannot be qualified as services of general economic interest, essential facilities, or publicly owned public spaces. Finally, the other three viable qualifications are examined in detail. Inspired by the German Bundesgerichtshof, the author proposes to qualify social media platforms as privately owned public spaces with a spectrum of procedural rules related to how ‘general’ the platform has opened i
- Published
- 2022
4. Ex-ante and Ex-post Access Restrictions in Marketplaces’ Terms of Service
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van der Donk, Berdien B E and van der Donk, Berdien B E
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Online marketplaces can exert great power over their platforms, and consequently, over the users and content on it. The goal of this article is to assess the current state of access restrictions and termination clauses in online marketplaces’ terms of service and to evaluate whether intervention is necessary to safeguard third-party resellers’ access to (essential) platforms to carry out their business. The article is divided into two parts. The first part discusses two types of online marketplaces’ power: ex-ante and ex-post access restrictions. It illustrates how both types of access restrictions form obstacles for third-party resellers to offer goods and services on online marketplaces’ platforms. Following this initial scene-setting, the article continues with an in-depth discussion of the redress mechanisms available for both types of access restrictions, and a case-study to illustrate the application of ex-post access restrictions on online marketplaces. The case study examines the terms of service of the five most frequently visited online marketplaces in the European Union and confirms the existence of a fragmented approach towards ex-post access restrictions. The author concludes that a ‘right to access a platform’ does not exist. An online marketplace cannot be obliged to contract a third-party reseller. Opposingly, the way the terms of service are currently applied on the assessed online marketplaces to handle ex-post access refusals do not to live up to the safeguards in the new Digital Services Act and will need (significant) amendment.
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- 2022
5. Legaltech for legal tech: an unresolved Danish saga
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van der Donk, Berdien B E and van der Donk, Berdien B E
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In a recent ruling between LEGALTECH ApS and LegalTech Denmark ApS, the Danish Maritime and Commercial Court has clarified some aspects of the use of legal tech as a trade name and a trademark. Based on this decision, Danish companies can no longer register legaltech as the trade name for their company, yet at the same time legaltech can still be used freely for marketing and promotion activities. This blog post discusses the facts of the case, the outcome, and looks forward to what the future will hold. Before digging deeper into the actual case, we start with a short recap of the difference in protection between trade names and trademarks.
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- 2022
6. European views on the privatization of the 'online public space'
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van der Donk, Berdien B E and van der Donk, Berdien B E
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- 2022
7. Annotatie bij: Rechtbank Amsterdam, 16 februari 2022, ECLI:NL:RBAMS:2022:557
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van der Donk, Berdien B E, Klos, Michael, van der Donk, Berdien B E, and Klos, Michael
- Published
- 2022
8. European views on the privatization of the public space: addressing human rights restrictions in platforms
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van der Donk, Berdien B E and van der Donk, Berdien B E
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- 2022
9. Cannabis, corona, and the latest morality developments in European trademark law
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van der Donk, Berdien B E and van der Donk, Berdien B E
- Abstract
This article provides an update on article 7 (1)(f) EUTMR, which covers the absolute ground of refusal for European trademarks contrary to public policy or principles of morality. The application of article 7 (1)(f) is strongly influenced by societal changes and therefore always subject to interpretational developments. In this article, the scope of article 7 (1)(f) is assessed in light of two recent developments: the emergence of the covid-19 pandemic, and the rise of cannabis use for therapeutic purposes. Both developments have sparked an increase in trademark applications and refusals. Firstly, a short overview of the application of article 7 (1)(f) is provided, followed by a thorough discussion of the European trademark refusals of the past two years (2019-2021) related to either cannabis or corona. It will show an inconsistency in the refusal of trademark on grounds of public policy and morality, mainly in relation to cannabis. It furthermore demonstrates the importance of the (social) context when assessing a potential moral controversy in a trademark, especially when the refusal is due to ‘suspected’ terminology, such as cannabis or corona.
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- 2022
10. The freedom to conduct a business as a counterargument to limit platform users’ freedom of expression
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Hindelang, Steffen, Moberg, Andreas, van der Donk, Berdien B E, Hindelang, Steffen, Moberg, Andreas, and van der Donk, Berdien B E
- Abstract
Book cover YSEC Yearbook of Socio-Economic Constitutions 2021 pp 33–58Cite as The Freedom to Conduct a Business as a Counterargument to Limit Platform Users’ Freedom of Expression Download book PDF Download book EPUB The Freedom to Conduct a Business as a Counterargument to Limit Platform Users’ Freedom of Expression Berdien B. E. van der Donk Chapter First Online: 12 March 2022 83 Accesses 5 Altmetric Part of the YSEC Yearbook of Socio-Economic Constitutions book series (YSEC,volume 2021) Abstract This chapter focuses on platforms’ protection against (unjustified) interference with the free drafting of house rules, viewed through the lens of European fundamental rights protection. It discusses the difference in the protection of two fundamental rights in the European Charter of Fundamental Rights: article 16’s freedom to conduct a business and article 17’s right to property. The articles’ subject of protection (‘the essence of the right’) will be mapped by analyzing the Court of Justice of the European Union (CJEU) case law between, respectively, 1974 and 1979 until 2020, and the outcome of this analysis will be applied to the process of running a platform. It will show that article 16, rather than article 17, covers platforms’ house rule drafting. However, it is unlikely that restrictive measures will interfere with the essence of article 16. Measures limiting house rule drafting can therefore be justifiable. To be justifiable, the measures must live up to the principle of proportionality. Therefore, subsequently, the question arises whether potential measures live up to this principle. To prevent a purely normative way of answering that question—due to the fact that a standardized test does not exist—the unfairness test of the Unfair Contract Terms Directive will be used as an interpretational guide. It is concluded that measures limiting a platform’s contractual freedom can, and mo
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- 2022
11. Should critique on governmental policy regarding Covid-19 be tolerated on online platforms? An analysis of recent case-law in the Netherlands.
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van der Donk, Berdien B E and van der Donk, Berdien B E
- Abstract
This policy and practice note describes and discusses two recent decisions by the District Court in Amsterdam regarding the applicability of YouTube’s and Facebook’s Community Guidelines on Covid-19 misinformation. The decisions (Café Weltschmerz/YouTube and Smart Exit/Facebook ) illustrate the tense intersection between, on the one hand, the possibility to express critique on the government’s policy to fight the outbreak of Covid-19 in the Netherlands, and on the other hand, the prevention of (dis)information with the potential to harm public health. The author will point out that the two decisions, although covering merely the same subject matter, differ significantly in argumentation regarding the (scope of the) application of the freedom of expression. Analysing this divergence in argumentation will show that the root of the difference can be traced back to a different valuation of the role of the online platforms regarding the dissemination of speech. A debate on this divergence is needed to prevent inconsistency in future decisions and contributes to the broader discussion on content regulation in the European Union.
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- 2022
12. How dynamic is a dynamic injunction? An analysis of the characteristics and the permissible scope of dynamic injunctions under European Law after CJEU C-18/18 (Glawischnig-Piesczek)
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Berdien B E and van der Donk
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European Union law ,Scope (project management) ,Political science ,Law ,Law and economics - Published
- 2020
13. Should Critique Governmental Policy Regarding Covid-19 Be Tolerated on Online Platforms? An Analysis of Recent Case-Law in the Netherlands
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van der Donk, Berdien B E, primary
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- 2022
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14. TALEN-mediated editing of endogenous T-cell receptors facilitates efficient reprogramming of T lymphocytes by lentiviral gene transfer
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Berdien, B, Mock, U, Atanackovic, D, and Fehse, B
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- 2014
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15. Digital Bouncers : A European Roadmap to Navigate Access Rights and Moderation Issues on Social Media Platforms
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Berdien B. E. van der Donk and Berdien B. E. van der Donk
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Online content moderation is a well-known phenomenon. However, no consistent pattern exists on how it is done or how it is legally dealt with. This book addresses the complex issue of questionable content removals and account suspensions on social media platforms in the European Union, solving the existing legal ambiguity with a powerful roadmap designed to guide decision-makers in navigating online access rights and moderation issues. The roadmap's elements are deduced from a technology-neutral comparative case law study of four Member States (Denmark, Germany, Italy, and the Netherlands) based on rigorous selection criteria that highlight the most salient distinctions that characterise legal approaches to social media access and moderation. The ‘layers'of the roadmap focus on such central issues as the following: the legal basis for social media platforms to impose restrictions; platform operators'right to shape access, including limitations to the platform's right to exclude users; the validity and enforceability of terms of service; and users'and platforms'remedies for breaches of the terms of service, including the procedural obligations in the Digital Services Act. Unlike previous work on the topic, this book does not focus on one field of law but touches upon and combines European law, constitutional and fundamental rights law, competition law, equality law, property law, and contract law, all reflected on and assessed through both a European and a national lens. By addressing these multifaceted legal aspects, it offers a holistic approach to resolving content moderation challenges and demonstrates which problems are most effectively addressed by which fields of law. The book's roadmap can be used within the European Union to address and/or resolve any access and moderation problems on social media platforms. It will serve as a valuable resource for judges, social media platforms, and dispute resolution bodies, providing practical insights and guidance in navigating this complex landscape and streamlining decision-making processes. It will prove of immeasurable value in fostering a balanced and fair approach to content moderation in the EU that will ensure that all European users have equal opportunities for redress.
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- 2024
16. Restricting the access to legal content online: are European consumer protection laws capable of securing fundamental rights protection?
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van der Donk, Berdien B E and van der Donk, Berdien B E
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When the access to opinions that differ from the majority in society are restricted, progress in (controversial) debates would quickly stagnate. A change in society often takes off because a small number of people disagree with the status quo and challenge it, such as for example pro-euthanasia activist Alain Cocq’s initiative to demonstrate his personal suffering due to a lack of access to active euthanasia in France. In September 2020, Facebook prohibited and blocked the live streaming of his euthanasia attempt. The social media platform did not refer to the fact that active euthanasia is illegal under French law, nor that President Macron has denied Cocq’s request for euthanasia. Rather, it based its decision solely on its own house rules. According to Facebook, allowing Cocq to stream his death would go against its Community Standards which prohibits portrayals of suicide. One could wonder how that decision would have turned out if identical content was live streamed by a Dutch, a Canadian or a Colombian national – all countries where active euthanasia is legal. Despite the fact that there is no consensus on the legality of euthanasia worldwide, Facebook chose to regulate the matter privately, and consequently applies a unified rule to its 2.7 billion users worldwide. This paper focuses on the freedom of (online) private companies to draft and enforce such house rules. On the one hand, private companies enjoy the freedom to conduct business, which should not be unnecessary restricted by state intervention. On the other hand, online platforms have grown into major sources of information, with over 57 percent of US millennials, and over 50 percent of adults in seven European Member States, accessing their news through social media. With so many people actively using online platforms to impart information, restricting the access to legal content poses a risk to a pluralist debate, and consequently can negatively affect societal progress as a whole.
- Published
- 2021
17. CJEU rules the right to distribution only applies to tangible digital works - UsedSoft-doctrine of exhaustion does not apply to e-books
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van der Donk, Berdien B E and van der Donk, Berdien B E
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In the decision discussed in this case comment (C-263/18, Tom Kabinet), the CJEU pulled the plug on second-hand markets for copyright-protected intangible works. From the decision it follows that the UsedSoft-doctrine, according to which the right to distribution exhausts after the first online sale of a computer program, only applies to other tangible (digital) works. The spreading of intangible works falls within the scope of the exclusive right to communicate to the public, to which the exemption of exhaustion does not apply. This marks a new era for the application of the principle of exhaustion in an online context.
- Published
- 2020
18. How dynamic is a dynamic injunction?:An analysis of the characteristics and the permissible scope of dynamic injunctions under European Law after CJEU C-18/18 (Glawischnig-Piesczek)
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van der Donk, Berdien B E and van der Donk, Berdien B E
- Abstract
Regular blocking injunctions, as they are currently applied, are merely unsuitable to effectively stop online infringements. Due to the technical structure of the internet, access blocks are easy to circumvent, and content can easily be re-hosted, re-uploaded or moved to a server abroad to further evade blocking measures. Over the past years, a new type of injunction to enforce online rights has emerged: the dynamic injunction. Dynamic injunctions have the potential to solve the problem of continuously enforcing rights online. Unlike normal blocking injunctions, which are specifically aimed at certain content and a certain infringer, a dynamic injunction’s scope is not set in stone. In October 2019, the Court of Justice of the European Union concluded in C-18/18 (Glawischnig-Piesczek) that the use of dynamic injunctions is non-conflicting with European law, paving a way for these injunctions to be used more frequently. This paper provides an analysis of dynamic injunctions’ characteristics and the permissible scope of this type of injunction under European law. It will show that dynamic injunctions are permissible, provided that these injunctions live up to the minimum legislative requirements and strike a fair balance between the fundamental rights of the parties involved. European law permits dynamic injunctions to include a broad range of uncertainty with regards to the legal subject of the injunction, though in contrast, the scope of the injunction’s content should be applied narrowly. Based on this, it is concluded that dynamic injunctions can oblige an online intermediary to block access to active infringements during the proceedings, and to monitor its service for and block access to all future identical infringements to these initial infringements, irrespective of the party uploading the content. Furthermore, to prevent a general monitoring obligation and to safeguard against over-filtering, similar infringements to the initial i
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- 2020
19. Trade secret law as part of information law
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Schovsbo, Jens, Minssen, Timo, Riis, Thomas, Udsen, Henrik, Schovsbo, Jens Hemmingsen, van der Donk, Berdien B E, Schovsbo, Jens, Minssen, Timo, Riis, Thomas, Udsen, Henrik, Schovsbo, Jens Hemmingsen, and van der Donk, Berdien B E
- Abstract
This chapter discusses the protection of trade secrets as provided for the the EU Directive on trade secerst as part of the broader legel field of 'informaiton law'.
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- 2020
20. How dynamic is a dynamic injunction? An analysis of the characteristics and the permissible scope of dynamic injunctions under European Law after CJEU C-18/18 (Glawischnig-Piesczek)
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van der Donk, Berdien B E, primary
- Published
- 2020
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21. van der Donk, Berdien B E
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van der Donk, Berdien B E and van der Donk, Berdien B E
- Published
- 2019
22. Should Critique on Governmental Policy Regarding Covid-19 Be Tolerated on Online Platforms? An Analysis of Recent Case-Law in the Netherlands.
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Donk, Berdien B E van der
- Subjects
COVID-19 ,GOVERNMENT policy ,COVID-19 pandemic ,FREEDOM of expression ,LEGAL judgments - Abstract
This policy and practice note describes and discusses two recent decisions by the District Court in Amsterdam regarding the applicability of YouTube's and Facebook's Community Guidelines on Covid-19 misinformation. The decisions (Café Weltschmerz/YouTube and Smart Exit/Facebook) illustrate the tense intersection between, on the one hand, the freedom to express criticism of the government's policy for fighting the outbreak of Covid-19 in the Netherlands, and on the other hand, the prevention of (dis)information with the potential to harm public health. The author will point out that the two decisions, although covering the same subject matter, differ significantly in argumentation regarding the (scope of the) application of the freedom of expression. Analysing this divergence in argumentation will show that its roots can be traced back to a different valuation of the role of the online platforms regarding the dissemination of speech. A debate on this divergence is needed to prevent inconsistency in future decisions and to contribute to the broader discussion on content regulation in the European Union. [ABSTRACT FROM AUTHOR]
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- 2021
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23. How dynamic is a dynamic injunction? An analysis of the characteristics and the permissible scope of dynamic injunctions under European Law after CJEU C-18/18 (Glawischnig-Piesczek).
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Donk, Berdien B E van der
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WEB portals ,EUROPEAN law ,INJUNCTIONS - Published
- 2020
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- View/download PDF
24. CJEU Rules the Right to Distribution Only Applies to Tangible Digital Works -- Used Soft Doctrine of Exhaustion does not apply to e-Books.
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van der Donk, Berdien B. E.
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EUROPEAN Union law ,PATENT exhaustion ,SECONDHAND trade ,COPYRIGHT ,COMPUTER software - Abstract
In the decision discussed in this case comment (Tom Kabinet (C-263/18), the CJEU pulled the plug on second-hand markets for copyright-protected intangible works. From the decision it follows that the UsedSoft-doctrine, according to which the right to distribution exhausts after the first online sale of a computer program, only applies to other tangible (digital) works. The spreading of intangible works falls within the scope of the exclusive right to communicate to the public, to which the exemption of exhaustion does not apply. This marks a new era for the application of the principle of exhaustion in an online context. [ABSTRACT FROM AUTHOR]
- Published
- 2020
25. mRNA transfection of a novel TAL effector nuclease (TALEN) facilitates efficient knockout of HIV co-receptor CCR5
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Mock, U., primary, Machowicz, R., additional, Hauber, I., additional, Horn, S., additional, Abramowski, P., additional, Berdien, B., additional, Hauber, J., additional, and Fehse, B., additional
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- 2015
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26. Cancer-testis antigen MAGE-C2/CT10 induces spontaneous CD4+ and CD8+ T-cell responses in multiple myeloma patients
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Reinhard, H, primary, Yousef, S, additional, Luetkens, T, additional, Fehse, B, additional, Berdien, B, additional, Kröger, N, additional, and Atanackovic, D, additional
- Published
- 2014
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27. Bacterial proteome adaptation during fermentation in dairy environments.
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van Olst B, Nugroho A, Boeren S, Vervoort J, Bachmann H, and Kleerebezem M
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- Animals, Proteome metabolism, Fermentation, Milk microbiology, Cultured Milk Products, Cheese microbiology, Lactococcus lactis genetics, Lactococcus lactis metabolism
- Abstract
The enzymatic repertoire of starter cultures belonging to the Lactococcus genus determines various important characteristics of fermented dairy products but might change in response to the substantial environmental changes in the manufacturing process. Assessing bacterial proteome adaptation in dairy and other food environments is challenging due to the high matrix-protein concentration and is even further complicated in particularly cheese by the high fat concentrations, the semi-solid state of that matrix, and the non-growing state of the bacteria. Here, we present bacterial harvesting and processing procedures that enable reproducible, high-resolution proteome determination in lactococcal cultures harvested from laboratory media, milk, and miniature Gouda cheese. Comparative proteome analysis of Lactococcus cremoris NCDO712 grown in laboratory medium and milk revealed proteome adaptations that predominantly reflect the differential (micro-)nutrient availability in these two environments. Additionally, the drastic environmental changes during cheese manufacturing only elicited subtle changes in the L. cremoris NCDO712 proteome, including modified expression levels of enzymes involved in flavour formation. The technical advances we describe offer novel opportunities to evaluate bacterial proteomes in relation to their performance in complex, protein- and/or fat-rich food matrices and highlight the potential of steering starter culture performance by preculture condition adjustments., Competing Interests: Declaration of competing interest The project is organized by and executed under the auspices of TiFN, a public - private partnership on precompetitive research in food and nutrition. HB is part-time employed by NIZO Food Research. The authors have declared that no competing interests exist in the writing of this publication., (Copyright © 2024 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2024
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28. The Development and Characteristics of Planetary Health in Medical Education: A Scoping Review.
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Visser EH, Oosterveld B, Slootweg IA, Vos HMM, Adriaanse MA, Schoones JW, and Brakema EA
- Abstract
Purpose: Climate change, biodiversity loss, and other ecological crises threaten human health globally. The interrelation between human health and ecosystems is addressed in the emerging field of planetary health. Ecological crises have created an urgency to integrate planetary health, including sustainable health care, into medical education. To facilitate integration and guide future research, this review aims to provide an overview of the existing literature about planetary health in medical education., Method: The authors conducted a scoping review using the conventional methodological framework for scoping studies. They performed a comprehensive search in 7 databases without language restrictions in March 2022. Two researchers independently extracted data. The team analyzed the data using data-driven thematic analysis, content analysis, and qualitative summarizing. Data were structured according to the Curriculum Development for Medical Education: A Six-Step Approach., Results: The authors identified 3,703 unique publications, of which 127 were included. Articles predominantly (71%, n = 90) covered the call to integrate planetary health in medical education (step 1: general needs assessment). Many publications (24%, n = 31) proposed learning objectives (step 3); these mainly concerned raising awareness while few concerned action perspectives. Publications limitedly reported on the final steps of curriculum development. Only 2 covered a full cycle of curriculum development. Most were published recently, with first authors mainly from Europe and North America., Conclusions: Planetary health in medical education is an urgent and hot topic. Literature focused predominantly on why planetary health should be integrated in medical education and what should be covered. The authors recommend future research and education development to shift to how to do so, especially in evaluation and feedback. Research and education development needs to be conducted and reported on systematically and underpinned by educational principles. Lastly, it would benefit from perspectives beyond 'Western-based' ones., (Copyright © 2024 The Author(s). Published by Wolters Kluwer Health, Inc. on behalf of the Association of American Medical Colleges.)
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- 2024
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29. Contrasting roles of cytochrome P450s in amitraz and chlorfenapyr resistance in the crop pest Tetranychus urticae.
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Vandenhole M, Lu X, Tsakireli D, Mermans C, De Rouck S, De Beer B, Simma E, Pergantis SA, Jonckheere W, Vontas J, and Van Leeuwen T
- Subjects
- Humans, Animals, Toluidines pharmacology, Toluidines metabolism, Cytochrome P-450 Enzyme System genetics, Cytochrome P-450 Enzyme System metabolism, Pyrethrins pharmacology, Pyrethrins metabolism, Tetranychidae genetics, Tetranychidae metabolism, Acaricides pharmacology, Acaricides metabolism
- Abstract
The molecular mechanisms of amitraz and chlorfenapyr resistance remain only poorly understood for major agricultural pests and vectors of human diseases. This study focusses on a multi-resistant field strain of the crop pest Tetranychus urticae, which could be readily selected in the laboratory to high levels of amitraz and chlorfenapyr resistance. Toxicity experiments using tralopyril, the active toxophore of chlorfenapyr, suggested decreased activation as a likely mechanism underlying resistance. Starting from the same parental strain, transcriptome profiling revealed that a cluster of detoxifying genes was upregulated after amitraz selection, but unexpectedly downregulated after chlorfenapyr selection. Further functional validation associated the upregulation of CYP392A16 with amitraz metabolism and the downregulation of CYP392D8 with reduced activation of chlorfenapyr to tralopyril. Genetic mapping (QTL analysis by BSA) was conducted in an attempt to unravel the genetic mechanisms of expression variation and resistance. This revealed that chlorfenapyr resistance was associated with a single QTL, while 3 QTLs were uncovered for amitraz resistance. Together with the observed contrasting gene expression patterns, we argue that transcriptional regulators most likely underly the distinct expression profiles associated with resistance, but these await further functional validation., Competing Interests: Declaration of competing interest The authors declare no competing interests., (Copyright © 2023 Elsevier Ltd. All rights reserved.)
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- 2024
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30. The hierarchy of sugar catabolization in Lactococcus cremoris .
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Douwenga S, van Olst B, Boeren S, Luo Y, Lai X, Teusink B, Vervoort J, Kleerebezem M, and Bachmann H
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- Glucose metabolism, Sugars, Carbohydrates
- Abstract
Importance: The availability of nutrients to microorganisms varies considerably between different environments, and changes can occur rapidly. As a general rule, a fast growth rate-typically growth on glucose-is associated with the repression of other carbohydrate utilization genes, but it is not clear to what extent catabolite repression is exerted by other sugars. We investigated the hierarchy of sugar utilization after substrate transitions in Lactococcus cremoris . For this, we determined the proteome and carbohydrate utilization capacity after growth on different sugars. The results show that the preparedness of cells for the utilization of "slower" sugars is not strictly determined by the growth rate. The data point to individual proteins relevant for various sugar transitions and suggest that the evolutionary history of the organism might be responsible for deviations from a strictly growth rate-related sugar catabolization hierarchy., Competing Interests: The project is organized and executed under the auspices of TiFN, a public-private partnership on precompetitive research in food and nutrition. H.B. is part-time employed by NIZO Food Research. The authors have declared that no competing interests exist in the writing of this publication. Funding for this research was obtained from Friesland Campina (Wageningen, The Netherlands), CSK Food Enrichment (Wageningen, The Netherlands), and Top-sector Agri&Food.
- Published
- 2023
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31. A glutamate-gated chloride channel as the mite-specific target-site of dicofol and other diphenylcarbinol acaricides.
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Vandenhole M, Mermans C, De Beer B, Xue W, Zhao Y, Ozoe Y, Liu G, Dermauw W, and Van Leeuwen T
- Subjects
- Dicofol, Chloride Channels genetics, Mutation, Acaricides pharmacology
- Abstract
Dicofol has been widely used to control phytophagous mites. Although dicofol is chemically related to DDT, its mode of action has remained elusive. Here, we mapped dicofol resistance in the spider mite Tetranychus urticae to two genomic regions. Each region harbored a glutamate-gated chloride channel (GluCl) gene that contained a mutation-G314D or G326E-known to confer resistance against the unrelated acaricide abamectin. Using electrophysiology assays we showed that dicofol and other diphenylcarbinol acaricides-bromopropylate and chlorobenzilate-induce persistent currents in Xenopus oocytes expressing wild-type T. urticae GluCl3 receptors and potentiate glutamate responses. In contrast, the G326E substitution abolished the agonistic activity of all three compounds. Assays with the wild-type Drosophila GluClα revealed that this receptor was unresponsive to dicofol. Homology modeling combined with ligand-docking confirmed the specificity of electrophysiology assays. Altogether, this work elucidates the mode of action of diphenylcarbinols as mite-specific agonists of GluCl., (© 2023. The Author(s).)
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- 2023
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32. A nuclear receptor HR96-related gene underlies large trans-driven differences in detoxification gene expression in a generalist herbivore.
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Ji M, Vandenhole M, De Beer B, De Rouck S, Villacis-Perez E, Feyereisen R, Clark RM, and Van Leeuwen T
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- Animals, Herbivory, Quantitative Trait Loci genetics, Gene Expression, Arthropods, Pesticides
- Abstract
The role, magnitude, and molecular nature of trans-driven expression variation underlying the upregulation of detoxification genes in pesticide resistant arthropod populations has remained enigmatic. In this study, we performed expression quantitative trait locus (eQTL) mapping (n = 458) between a pesticide resistant and a susceptible strain of the generalist herbivore and crop pest Tetranychus urticae. We found that a single trans eQTL hotspot controlled large differences in the expression of a subset of genes in different detoxification gene families, as well as other genes associated with host plant use. As established by additional genetic approaches including RNAi gene knockdown, a duplicated gene with a nuclear hormone receptor HR96-related ligand-binding domain was identified as causal for the expression differences between strains. The presence of a large family of HR96-related genes in T. urticae may enable modular control of detoxification and host plant use genes, facilitating this species' known and rapid evolution to diverse pesticides and host plants., (© 2023. Springer Nature Limited.)
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- 2023
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33. Intraspecific diversity in the mechanisms underlying abamectin resistance in a cosmopolitan pest.
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Villacis-Perez E, Xue W, Vandenhole M, De Beer B, Dermauw W, and Van Leeuwen T
- Abstract
Pesticide resistance relies on a myriad of mechanisms, ranging from single mutations to a complex and polygenic architecture, and it involves mechanisms such as target-site insensitivity, metabolic detoxification, or a combination of these, with either additive or synergistic effects. Several resistance mechanisms against abamectin, a macrocyclic lactone widely used in crop protection, have been reported in the cosmopolitan pest Tetranychus urticae . However, it has been shown that a single mechanism cannot account for the high levels of abamectin resistance found across different mite populations. Here, we used experimental evolution combined with bulked segregant analyses to map quantitative trait loci (QTL) associated with abamectin resistance in two genetically unrelated populations of T. urticae . In these two independent QTL mapping experiments, three and four QTLs were identified, of which three were shared between experiments. Shared QTLs contained genes encoding subunits of the glutamate-gated chloride channel (GluCl) and harboured previously reported mutations, including G314D in GluCl1 and G326E in GluCl3 , but also novel resistance candidate loci, including DNA helicases and chemosensory receptors. Surprisingly, the fourth QTL, present only in only one of the experiments and thus unique for one resistant parental line, revealed a non-functional variant of GluCl2 , suggesting gene knock-out as resistance mechanism. Our study uncovers the complex basis of abamectin resistance, and it highlights the intraspecific diversity of genetic mechanisms underlying resistance in a cosmopolitan pest., Competing Interests: The authors declare that they have no conflict of interest related to this manuscript., (© 2023 The Authors. Evolutionary Applications published by John Wiley & Sons Ltd.)
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- 2023
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34. Electrodiagnostic test results in people with a working diagnosis of cubital tunnel syndrome.
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Kortlever JTP, Brandsema B, Gradl-Dietsch G, Zhao M, and Ring D
- Abstract
Background: Electrodiagnostic tests (EDx) can determine when symptoms and signs suggestive of idiopathic ulnar neuropathy at the elbow (cubital tunnel syndrome; CubTS) is due to measurable ulnar neuropathy at the elbow (UNE), cervical radiculopathy, or median neuropathy at the carpal tunnel, and when there is no measurable neuropathology associated with the symptoms. The role of EDx in management of CubTS is debated., Questions: (1) What is the percentage of patients with CubTS (both including and excluding patients with a previous electrodiagnosis of idiopathic UNE) that have EDx results consistent with idiopathic UNE, other neuropathology, and no detectable neuropathology (2) What factors (e.g. age and gender); are independently associated with electrodiagnosis of UNE., Methods: We retrospectively reviewed all medical records of 133 patients with a working diagnosis of CubTS sent for EDx over a 5-year period in one large urban medical center. We recorded data on patient demographics, comorbidities, non-specialist or specialist referring physician, and EDx results., Results: Among 133 patients, 61% (N = 81) of EDx identified idiopathic UNE, 14% (N = 18) identified other neuropathology, and for 26% (N = 34) there was no measurable neuropathology. Among the 14 patients with a previous ipsilateral or contralateral electrodiagnosis of UNE, all 14 had electrodiagnosis of UNE. Older age and men were independently associated with an increased likelihood of UNE., Conclusions: The observation that people diagnosed with CubTS often do not have UNE, particularly if they are relatively young, suggests that the diagnosis of CubTS may benefit from a more stringent clinical prediction rule., Level of Evidence: Diagnostic; Retrospective cohort study; Level III., Competing Interests: No benefits in any form have been received or will be received related directly or indirectly to the subject of this article. JK, BB, GGD, and MZ certify that they have no commercial associations (e.g. consultancies, stock ownership, equity interest, patent/licensing arrangements, etc.) that might pose a conflict of interest in connection with the submitted article. DR has or may receive payment or benefits from Skeletal Dynamics, Wright Medical for elbow implants, Deputy Editor for Clinical Orthopaedics and Related Research, Universities and Hospitals, Lawyers outside the submitted work., (© 2023 Professor P K Surendran Memorial Education Foundation. Published by Elsevier B.V. All rights reserved.)
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- 2023
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35. Trans-driven variation in expression is common among detoxification genes in the extreme generalist herbivore Tetranychus urticae.
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Kurlovs AH, De Beer B, Ji M, Vandenhole M, De Meyer T, Feyereisen R, Clark RM, and Van Leeuwen T
- Subjects
- Animals, Herbivory, Gene Transfer, Horizontal, Adaptation, Physiological, Plants, Tetranychidae genetics, Pesticides
- Abstract
The extreme adaptation potential of the generalist herbivore Tetranychus urticae (the two-spotted spider mite) to pesticides as well as diverse host plants has been associated with clade-specific gene expansions in known detoxifying enzyme families, and with extensive and rapid transcriptional responses. However, how this broad transcriptional potential is regulated remains largely unknown. Using a parental/F1 design in which four inbred strains were crossed to a common inbred strain, we assessed the genetic basis and inheritance of gene expression variation in T. urticae. Mirroring known phenotypic variation in the progenitor strains of the inbreds, we confirmed that the inbred strains we created were genetically distinct, varied markedly in pesticide resistance, and also captured variation in host plant fitness as is commonly observed in this species. By examining differences in gene expression between parents and allele-specific expression in F1s, we found that variation in RNA abundance was more often explained in trans as compared to cis, with the former associated with dominance in inheritance. Strikingly, in a gene ontology analysis, detoxification genes of the cytochrome P450 monooxygenase (CYP) family, as well as dioxygenases (DOGs) acquired from horizontal gene transfer from fungi, were specifically enriched at the extremes of trans-driven up- and downregulation. In particular, multiple CYPs and DOGs with broad substrate-specificities for pesticides or plant specialized compounds were exceptionally highly upregulated as a result of trans-regulatory variation, or in some cases synergism of cis and trans, in the most multi-pesticide resistant strains. Collectively, our findings highlight the potential importance of trans-driven expression variation in genes associated with xenobiotic metabolism and host plant use for rapid adaptation in T. urticae, and also suggests modular control of these genes, a regulatory architecture that might ameliorate negative pleiotropic effects., Competing Interests: The authors have declared that no competing interests exist., (Copyright: © 2022 Kurlovs et al. This is an open access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.)
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- 2022
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36. High-Resolution Genetic Mapping Combined with Transcriptome Profiling Reveals That Both Target-Site Resistance and Increased Detoxification Confer Resistance to the Pyrethroid Bifenthrin in the Spider Mite Tetranychus urticae .
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De Beer B, Vandenhole M, Njiru C, Spanoghe P, Dermauw W, and Van Leeuwen T
- Abstract
Pyrethroids are widely applied insecticides in agriculture, but their frequent use has provoked many cases of resistance, in which mutations in the voltage-gated sodium channel (VGSC), the pyrethroid target-site, were shown to play a major role. However, for the spider mite Tetranychus urticae , it has also been shown that increased detoxification contributes to resistance against the pyrethroid bifenthrin. Here, we performed QTL-mapping to identify the genomic loci underlying bifenthrin resistance in T. urticae . Two loci on chromosome 1 were identified, with the VGSC gene being located near the second QTL and harboring the well-known L1024V mutation. In addition, the presence of an L925M mutation in the VGSC of a highly bifenthrin-resistant strain and its loss in its derived, susceptible, inbred line indicated the importance of target-site mutations in bifenthrin resistance. Further, RNAseq experiments revealed that genes encoding detoxification enzymes, including carboxyl/choline esterases (CCEs), cytochrome P450 monooxygenases and UDP-glycosyl transferases (UGTs), were overexpressed in resistant strains. Toxicity bioassays with bifenthrin (ester pyrethroid) and etofenprox (non-ester pyrethroid) also indicated a possible role for CCEs in bifenthrin resistance. A selection of CCEs and UGTs were therefore functionally expressed, and CCEinc18 was shown to metabolize bifenthrin, while teturUGT10 could glycosylate bifenthrin-alcohol. To conclude, our findings suggest that both target-site and metabolic mechanisms underlie bifenthrin resistance in T. urticae , and these might synergize high levels of resistance.
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- 2022
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37. Manganese Modulates Metabolic Activity and Redox Homeostasis in Translationally Blocked Lactococcus cremoris , Impacting Metabolic Persistence, Cell Culturability, and Flavor Formation.
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Nugroho ADW, van Olst B, Bachtiar SA, Boeren S, Kleerebezem M, and Bachmann H
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- Fermentation, Homeostasis, Lactococcus, Manganese metabolism, Manganese pharmacology, NAD metabolism, NAD pharmacology, Oxidation-Reduction, Proteome metabolism, Proteome pharmacology, Cheese microbiology, Lactococcus lactis metabolism
- Abstract
Manganese (Mn) is an essential trace element that is supplemented in microbial media with varying benefits across species and growth conditions. We found that growth of Lactococcus cremoris was unaffected by manganese omission from the growth medium. The main proteome adaptation to manganese omission involved increased manganese transporter production (up to 2,000-fold), while the remaining 10 significant proteome changes were between 1.4- and 4-fold. Further investigation in translationally blocked (TB), nongrowing cells showed that Mn supplementation (20 μM) led to approximately 1.5 X faster acidification compared with Mn-free conditions. However, this faster acidification stagnated within 24 h, likely due to draining of intracellular NADH that coincides with substantial loss of culturability. Conversely, without manganese, nongrowing cells persisted to acidify for weeks, albeit at a reduced rate, but maintaining redox balance and culturability. Strikingly, despite being unculturable, α-keto acid-derived aldehydes continued to accumulate in cells incubated in the presence of manganese, whereas without manganese cells predominantly formed the corresponding alcohols. This is most likely reflecting NADH availability for the alcohol dehydrogenase-catalyzed conversion. Overall, manganese influences the lactococcal acidification rate, and flavor formation capacity in a redox dependent manner. These are important industrial traits especially during cheese ripening, where cells are in a non-growing, often unculturable state. IMPORTANCE In nature as well as in various biotechnology applications, microorganisms are often in a nongrowing state and their metabolic persistence determines cell survival and functionality. Industrial examples are dairy fermentations where bacteria remain active during the ripening phases that can take up to months and even years. Here we investigated environmental factors that can influence lactococcal metabolic persistence throughout such prolonged periods. We found that in the absence of manganese, acidification of nongrowing cells remained active for weeks while in the presence of manganese it stopped within 1 day. The latter coincided with the accumulation of amino acid derived volatile metabolites. Based on metabolic conversions, proteome analysis, and a reporter assay, we demonstrated that the manganese elicited effects were NADH dependent. Overall the results show the effect of environmental modulation on prolonged cell-based catalysis, which is highly relevant to non-growing cells in nature and biotechnological applications.
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- 2022
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38. QTL mapping suggests that both cytochrome P450-mediated detoxification and target-site resistance are involved in fenbutatin oxide resistance in Tetranychus urticae.
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De Beer B, Villacis-Perez E, Khalighi M, Saalwaechter C, Vandenhole M, Jonckheere W, Ismaeil I, Geibel S, Van Leeuwen T, and Dermauw W
- Subjects
- Adenosine Triphosphate pharmacology, Animals, Cytochrome P-450 Enzyme System genetics, Organotin Compounds, Acaricides pharmacology, Tetranychidae genetics
- Abstract
The organotin acaricide fenbutatin oxide (FBO) - an inhibitor of mitochondrial ATP-synthase - has been one of the most extensively used acaricides for the control of spider mites, and is still in use today. Resistance against FBO has evolved in many regions around the world but only few studies have investigated the molecular and genetic mechanisms of resistance to organotin acaricides. Here, we found that FBO resistance is polygenic in two genetically distant, highly resistant strains of the spider mite Tetranychus urticae, MAR-AB and MR-VL. To identify the loci underlying FBO resistance, two independent bulked segregant analysis (BSA) based QTL mapping experiments, BSA MAR-AB and BSA MR-VL, were performed. Two QTLs on chromosome 1 were associated with FBO resistance in each mapping experiment. At the second QTL of BSA MAR-AB, several cytochrome P450 monooxygenase (CYP) genes were located, including CYP392E4, CYP392E6 and CYP392E11, the latter being overexpressed in MAR-AB. Synergism tests further implied a role for CYPs in FBO resistance. Subunit c of mitochondrial ATP-synthase was located near the first QTL of both mapping experiments and harbored a unique V89A mutation enriched in the resistant parents and selected BSA populations. Marker-assisted introgression into a susceptible strain demonstrated a moderate but significant effect of the V89A mutation on toxicity of organotin acaricides. The impact of the mutation on organotin inhibition of ATP synthase was also functionally confirmed by ATPase assays on mitochondrial preparations. To conclude, our findings suggest that FBO resistance in the spider mite T. urticae is a complex interplay between CYP-mediated detoxification and target-site resistance., (Copyright © 2022 Elsevier Ltd. All rights reserved.)
- Published
- 2022
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39. Should Critique on Governmental Policy Regarding Covid-19 Be Tolerated on Online Platforms? An Analysis of Recent Case-Law in the Netherlands.
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van der Donk BBE
- Abstract
This policy and practice note describes and discusses two recent decisions by the District Court in Amsterdam regarding the applicability of YouTube's and Facebook's Community Guidelines on Covid-19 misinformation . The decisions ( Café Weltschmerz/YouTube and Smart Exit/Facebook) illustrate the tense intersection between, on the one hand, the freedom to express criticism of the government's policy for fighting the outbreak of Covid-19 in the Netherlands, and on the other hand, the prevention of (dis)information with the potential to harm public health. The author will point out that the two decisions, although covering the same subject matter, differ significantly in argumentation regarding the (scope of the) application of the freedom of expression. Analysing this divergence in argumentation will show that its roots can be traced back to a different valuation of the role of the online platforms regarding the dissemination of speech. A debate on this divergence is needed to prevent inconsistency in future decisions and to contribute to the broader discussion on content regulation in the European Union., (© The Author(s) 2022. Published by Oxford University Press. All rights reserved. For permissions, please email: journals.permissions@oup.com.)
- Published
- 2022
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40. Proteome constraints reveal targets for improving microbial fitness in nutrient-rich environments.
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Chen Y, van Pelt-KleinJan E, van Olst B, Douwenga S, Boeren S, Bachmann H, Molenaar D, Nielsen J, and Teusink B
- Subjects
- Adenosine Triphosphate metabolism, Biological Evolution, Models, Biological, Mutation genetics, Reproducibility of Results, Arginine metabolism, Bacterial Proteins metabolism, Genetic Fitness, Glucose metabolism, Lactococcus lactis genetics, Lactococcus lactis metabolism, Proteome metabolism
- Abstract
Cells adapt to different conditions via gene expression that tunes metabolism for maximal fitness. Constraints on cellular proteome may limit such expression strategies and introduce trade-offs. Resource allocation under proteome constraints has explained regulatory strategies in bacteria. It is unclear, however, to what extent these constraints can predict evolutionary changes, especially for microorganisms that evolved under nutrient-rich conditions, i.e., multiple available nitrogen sources, such as Lactococcus lactis. Here, we present a proteome-constrained genome-scale metabolic model of L. lactis (pcLactis) to interpret growth on multiple nutrients. Through integration of proteomics and flux data, in glucose-limited chemostats, the model predicted glucose and arginine uptake as dominant constraints at low growth rates. Indeed, glucose and arginine catabolism were found upregulated in evolved mutants. At high growth rates, pcLactis correctly predicted the observed shutdown of arginine catabolism because limited proteome availability favored lactate for ATP production. Thus, our model-based analysis is able to identify and explain the proteome constraints that limit growth rate in nutrient-rich environments and thus form targets of fitness improvement., (© 2021 The Authors. Published under the terms of the CC BY 4.0 license.)
- Published
- 2021
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41. The Impact of a New Interleukin-2-Based Immunotherapy Candidate on Urothelial Cells to Support Use for Intravesical Drug Delivery.
- Author
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Schmitz L, Berdien B, Huland E, Dase P, Beutel K, Fisch M, and Engel O
- Abstract
(1) Background: The intravesical instillation of interleukin-2 (IL-2) has been shown to be very well tolerated and promising in patients with bladder malignancies. This study aims to confirm the use of a new IL-2 containing immunotherapy candidate as safe for intravesical application. IL-2, produced in mammalian cells, is glycosylated, because of its unique solubility and stability optimized for intravesical use. (2) Materials and Methods: Urothelial cells and fibroblasts were generated out of porcine bladder and cultured until they reached second passage. Afterwards, they were cultivated in renal epithelial medium (REM) and Dulbecco's modified Eagles medium (DMEM) with the IL-2 candidate (IMS-Research) and three more types of human interleukin-2 immunotherapy products (IMS-Pure, Natural IL-2, Aldesleukin) in four different concentrations (100, 250, 500, 1000 IU/mL). Cell proliferation was analyzed by water soluble tetrazolium (WST) proliferation assay after 0, 3, and 6 days for single cell culture and co-culture. (3) Results: Proliferation assays showed that all IL-2 products induced very similar cultivation results and none of the IL-2 variants had a negative impact on the proliferation of urothelial cells and fibroblast in either concentration. (4) Conclusion: Human recombinant glycosylated IL-2 as well as human non-glycosylated IL-2 have no negative influence on the tissue cell proliferation of porcine urothelial cells and fibroblasts in vitro and represent a promising and innovative potential intravesical therapy candidate for patients in high need.
- Published
- 2020
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42. [Proton pump inhibitors when using clopidogrel: balance between necessity and disadvantages].
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van der Elst K, Oortgiesen B, Kruik-Kollöffel W, Hoogendoorn M, Hofma S, and van Roon E
- Subjects
- Aspirin adverse effects, Clopidogrel administration & dosage, Drug Interactions, Female, Gastrointestinal Diseases, Gastrointestinal Hemorrhage chemically induced, Humans, Male, Peptic Ulcer chemically induced, Platelet Aggregation Inhibitors adverse effects, Proton Pump Inhibitors administration & dosage, Risk Factors, Clopidogrel adverse effects, Gastrointestinal Hemorrhage prevention & control, Peptic Ulcer prevention & control, Proton Pump Inhibitors adverse effects
- Abstract
Rationale When patients are using carbasalate calcium or acetylsalicylic acid (ASA), it is recommended to prescribe a proton pump inhibitor (PPI) in order to prevent gastrointestinal (GI) bleeding. Should this recommendation also be followed for patients who are using clopidogrel in monotherapy, which is increasingly the case in practice? Method In a systematic literature review of the occurrence of GI bleeding when using clopidogrel versus ASA, we included 9 studies that compared the risk of GI bleeding when using ASA with clopidogrel monotherapy. Results These 9 studies on clopidogrel and ASA show that the risk of GI bleeding is also elevated when using clopidogrel monotherapy and that it is comparable with the risk of GI bleeding when using ASA. Conclusion Based on the current literature, we recommend prescribing pantoprazole to patients who are using clopidogrel monotherapy and have additional risk factors for GI bleeding, in accordance with the procedure for low-dose ASA. The risk of GI bleeding must be weighed against the disadvantages of using PPIs.
- Published
- 2019
43. Naturally occurring antibodies isolated from PD patients inhibit synuclein seeding in vitro and recognize Lewy pathology.
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Li X, Koudstaal W, Fletcher L, Costa M, van Winsen M, Siregar B, Inganäs H, Kim J, Keogh E, Macedo J, Holland T, Perry S, Bard F, Hoozemans JJ, Goudsmit J, Apetri A, and Pascual G
- Subjects
- Aged, Antibodies isolation & purification, B-Lymphocytes immunology, HEK293 Cells, Humans, Mesencephalon metabolism, Mesencephalon pathology, Middle Aged, Mutation, Parkinson Disease pathology, Protein Aggregation, Pathological metabolism, Antibodies metabolism, Lewy Bodies metabolism, Lewy Bodies pathology, Parkinson Disease immunology, alpha-Synuclein metabolism
- Abstract
Deposition of α-synuclein into Lewy bodies and Lewy neurites is the hallmark of Parkinson's disease (PD). It is hypothesized that α-synuclein pathology spreads by a "prion-like" mechanism (i.e., by seeded aggregation or templated misfolding). Therefore, various extracellular α-synuclein conformers and/or posttranslational modifications may serve as biomarkers of disease or potential targets for novel interventions. To explore whether the antibody repertoires of PD patients contain anti-α-synuclein antibodies that can potentially be used as markers or immunotherapy, we interrogated peripheral IgG
+ memory B cells from PD patients for reactivity to α-synuclein. In total, ten somatically mutated antibodies were recovered, suggesting the presence of an ongoing antigen-driven immune response. The three antibodies that had the highest affinity to recombinant full-length α-synuclein, aSyn-323.1, aSyn-336.1 and aSyn-338.1, were characterized further and shown to recognize epitopes in the C terminus of α-synuclein with binding affinities between 0.3 and 2.8 μM. Furthermore, all three antibodies were able to neutralize the "seeding" of intracellular synuclein aggregates in an in vitro α-synuclein seeding assay. Finally, differential reactivities were observed for all three human anti-α-synuclein antibodies across tissue treatment conditions by immunohistochemistry. Our results suggest that the memory B-cell repertoire of PD patients might represent a potential source of biomarkers and therapies.- Published
- 2019
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44. Structural Basis for Recognition of a Unique Epitope by a Human Anti-tau Antibody.
- Author
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Zhang H, Zhu X, Pascual G, Wadia JS, Keogh E, Hoozemans JJ, Siregar B, Inganäs H, Stoop EJM, Goudsmit J, Apetri A, Koudstaal W, and Wilson IA
- Subjects
- Alzheimer Disease metabolism, Antibodies, Monoclonal chemistry, Brain metabolism, Cell Line, Crystallography, X-Ray, Epitopes, B-Lymphocyte chemistry, HEK293 Cells, Humans, Models, Molecular, Phosphorylation, Protein Conformation, tau Proteins metabolism, Alzheimer Disease diagnosis, Antibodies, Monoclonal metabolism, Epitopes, B-Lymphocyte metabolism, tau Proteins chemistry
- Abstract
Aggregation of the hyperphosphorylated protein tau into neurofibrillary tangles and neuropil threads is a hallmark of Alzheimer disease (AD). Identification and characterization of the epitopes recognized by anti-tau antibodies might shed light on the molecular mechanisms of AD pathogenesis. Here we report on the biochemical and structural characterization of a tau-specific monoclonal antibody CBTAU-24.1, which was isolated from the human memory B cell repertoire. Immunohistochemical staining with CBTAU-24.1 specifically detects pathological tau structures in AD brain samples. The crystal structure of CBTAU-24.1 Fab with a phosphorylated tau peptide revealed recognition of a unique epitope (Ser235-Leu243) in the tau proline-rich domain. Interestingly, the antibody can bind tau regardless of phosphorylation state of its epitope region and also recognizes both monomeric and paired helical filament tau irrespective of phosphorylation status. This human anti-tau antibody and its unique epitope may aid in development of diagnostics and/or therapeutic AD strategies., (Copyright © 2018 Elsevier Ltd. All rights reserved.)
- Published
- 2018
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45. Enhancement of therapeutic potential of a naturally occurring human antibody targeting a phosphorylated Ser 422 containing epitope on pathological tau.
- Author
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van Ameijde J, Crespo R, Janson R, Juraszek J, Siregar B, Verveen H, Sprengers I, Nahar T, Hoozemans JJ, Steinbacher S, Willems R, Delbroek L, Borgers M, Dockx K, Van Kolen K, Mercken M, Pascual G, Koudstaal W, and Apetri A
- Subjects
- Aged, Aged, 80 and over, Alzheimer Disease metabolism, Animals, Antibody Affinity drug effects, Autopsy, Brain pathology, Dose-Response Relationship, Drug, Epitopes metabolism, Female, Humans, Male, Mice, Mice, Transgenic, Microscopy, Atomic Force, Middle Aged, Models, Molecular, Mutagenesis, Mutation genetics, Phosphorylation physiology, Protein Aggregation, Pathological metabolism, Protein Aggregation, Pathological pathology, Protein Aggregation, Pathological therapy, Alzheimer Disease drug therapy, Alzheimer Disease pathology, Antibodies pharmacology, Brain metabolism, Serine metabolism, tau Proteins immunology, tau Proteins metabolism
- Abstract
Aggregation of tau protein and spreading of tau aggregates are pivotal pathological processes in a range of neurological disorders. Accumulating evidence suggests that immunotherapy targeting tau may be a viable therapeutic strategy. We have previously described the isolation of antibody CBTAU-22.1 from the memory B-cell repertoire of healthy human donors. CBTAU-22.1 was shown to specifically bind a disease-associated phosphorylated epitope in the C-terminus of tau (Ser
422 ) and to be able to inhibit the spreading of pathological tau aggregates from P301S spinal cord lysates in vitro, albeit with limited potency. Using a combination of rational design and random mutagenesis we have derived a variant antibody with improved affinity while maintaining the specificity of the parental antibody. This affinity improved antibody showed greatly enhanced potency in a cell-based immunodepletion assay using paired helical filaments (PHFs) derived from human Alzheimer's disease (AD) brain tissue. Moreover, the affinity improved antibody limits the in vitro aggregation propensity of full length tau species specifically phosphorylated at position 422 produced by employing a native chemical ligation approach. Together, these results indicate that in addition to being able to inhibit the spreading of pathological tau aggregates, the matured antibody can potentially also interfere with the nucleation of tau which is believed to be the first step of the pathogenic process. Finally, the functionality in a P301L transgenic mice co-injection model highlights the therapeutic potential of human antibody dmCBTAU-22.1.- Published
- 2018
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46. A common antigenic motif recognized by naturally occurring human V H 5-51/V L 4-1 anti-tau antibodies with distinct functionalities.
- Author
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Apetri A, Crespo R, Juraszek J, Pascual G, Janson R, Zhu X, Zhang H, Keogh E, Holland T, Wadia J, Verveen H, Siregar B, Mrosek M, Taggenbrock R, Ameijde J, Inganäs H, van Winsen M, Koldijk MH, Zuijdgeest D, Borgers M, Dockx K, Stoop EJM, Yu W, Brinkman-van der Linden EC, Ummenthum K, van Kolen K, Mercken M, Steinbacher S, de Marco D, Hoozemans JJ, Wilson IA, Koudstaal W, and Goudsmit J
- Subjects
- Adolescent, Adult, Aged, Antibody Specificity, B-Lymphocytes drug effects, Crystallization, Dose-Response Relationship, Drug, Female, Humans, Immunodominant Epitopes metabolism, Male, Microglia metabolism, Microscopy, Atomic Force, Middle Aged, Models, Molecular, Molecular Sequence Data, Protein Aggregates, Young Adult, B-Lymphocytes metabolism, Immunoglobulin G pharmacology, Immunoglobulin Heavy Chains metabolism, Immunoglobulin Light Chains metabolism, tau Proteins immunology, tau Proteins metabolism
- Abstract
Misfolding and aggregation of tau protein are closely associated with the onset and progression of Alzheimer's Disease (AD). By interrogating IgG
+ memory B cells from asymptomatic donors with tau peptides, we have identified two somatically mutated VH 5-51/VL 4-1 antibodies. One of these, CBTAU-27.1, binds to the aggregation motif in the R3 repeat domain and blocks the aggregation of tau into paired helical filaments (PHFs) by sequestering monomeric tau. The other, CBTAU-28.1, binds to the N-terminal insert region and inhibits the spreading of tau seeds and mediates the uptake of tau aggregates into microglia by binding PHFs. Crystal structures revealed that the combination of VH 5-51 and VL 4-1 recognizes a common Pro-Xn -Lys motif driven by germline-encoded hotspot interactions while the specificity and thereby functionality of the antibodies are defined by the CDR3 regions. Affinity improvement led to improvement in functionality, identifying their epitopes as new targets for therapy and prevention of AD.- Published
- 2018
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47. Restoration of renal function in patients with newly diagnosed multiple myeloma is not associated with improved survival: a population-based study.
- Author
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de Vries JC, Oortgiesen B, Hemmelder MH, van Roon E, Kibbelaar RE, Veeger N, and Hoogendoorn M
- Subjects
- Aged, Aged, 80 and over, Female, Glomerular Filtration Rate, Humans, Kaplan-Meier Estimate, Kidney Diseases epidemiology, Kidney Diseases etiology, Kidney Function Tests, Male, Middle Aged, Multiple Myeloma complications, Multiple Myeloma diagnosis, Multiple Myeloma epidemiology, Population Surveillance, Prognosis, Risk Factors, Multiple Myeloma mortality
- Abstract
Renal impairment (RI) in patients with multiple myeloma (MM) is associated with poor prognosis. In this population-based cohort study, we assessed the effects of renal response, evaluated according to the IMWG-criteria, on overall survival (OS) in patients with newly diagnosed MM with RI at presentation. All included patients were diagnosed between January 2005 and January 2014 with MM and RI in Friesland, a province of the Netherlands. Of the 131 included patients, 61% achieved renal response. Using a time-varying exposure Cox model, no difference in OS between renal response and non-response was observed (HR = 1.08, 95% CI = 0.67-1.74, p = .76). In multivariable analysis, baseline eGFR <30 ml/min (HR = 1.71), age >70 yrs (HR = 1.77), hypercalcemia (HR = 2.73), lambda Bence-Jones (HR= 1.76), and initial treatment regimen (HR = 0.89 for thalidomide, HR = 1.95 in treatment regimens without novel agents and HR = 3.60 for no chemotherapy, all vs. bortezomib) were associated with decreased OS. In conclusion, achieving renal response was not associated with improved OS.
- Published
- 2017
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48. Immunological memory to hyperphosphorylated tau in asymptomatic individuals.
- Author
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Pascual G, Wadia JS, Zhu X, Keogh E, Kükrer B, van Ameijde J, Inganäs H, Siregar B, Perdok G, Diefenbach O, Nahar T, Sprengers I, Koldijk MH, der Linden EC, Peferoen LA, Zhang H, Yu W, Li X, Wagner M, Moreno V, Kim J, Costa M, West K, Fulton Z, Chammas L, Luckashenak N, Fletcher L, Holland T, Arnold C, Anthony Williamson R, Hoozemans JJ, Apetri A, Bard F, Wilson IA, Koudstaal W, and Goudsmit J
- Subjects
- Adolescent, Adult, Aged, Amino Acid Sequence physiology, Antibodies, Monoclonal immunology, Binding Sites, Epitopes metabolism, Female, Humans, Male, Middle Aged, Neurofibrillary Tangles pathology, Phosphorylation, Young Adult, Alzheimer Disease immunology, Epitopes immunology, Immunologic Memory immunology, Neurofibrillary Tangles immunology, tau Proteins metabolism
- Abstract
Several reports have described the presence of antibodies against Alzheimer's disease-associated hyperphosphorylated forms of tau in serum of healthy individuals. To characterize the specificities that can be found, we interrogated peripheral IgG
+ memory B cells from asymptomatic blood donors for reactivity to a panel of phosphorylated tau peptides using a single-cell screening assay. Antibody sequences were recovered, cloned, and expressed as full-length IgGs. In total, 52 somatically mutated tau-binding antibodies were identified, corresponding to 35 unique clonal families. Forty-one of these antibodies recognize epitopes in the proline-rich and C-terminal domains, and binding of 26 of these antibodies is strictly phosphorylation dependent. Thirteen antibodies showed inhibitory activity in a P301S lysate seeded in vitro tau aggregation assay. Two such antibodies, CBTAU-7.1 and CBTAU-22.1, which bind to the proline-rich and C-terminal regions of tau, respectively, were characterized in more detail. CBTAU-7.1 recognizes an epitope that is similar to that of murine anti-PHF antibody AT8, but has different phospho requirements. Both CBTAU-7.1 and CBTAU-22.1 detect pathological tau deposits in post-mortem brain tissue. CBTAU-7.1 reveals a similar IHC distribution pattern as AT8, immunostaining (pre)tangles, threads, and neuritic plaques. CBTAU-22.1 shows selective detection of neurofibrillary changes by IHC. Taken together, these results suggest the presence of an ongoing antigen-driven immune response against tau in healthy individuals. The wide range of specificities to tau suggests that the human immune repertoire may contain antibodies that can serve as biomarkers or be exploited for therapy.- Published
- 2017
- Full Text
- View/download PDF
49. Extra-articular scapular fractures: comparison of theoretical and actual treatment.
- Author
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Brandsema B, Neuhaus V, Gradl G, and Ring DC
- Abstract
Background: Discrete radiographic thresholds of scapular fracture deformity proposed as a guide for when to utilize operative treatment are a matter of debate. The purpose of the present study was to determine how many patients would have received operative treatment according to these criteria and how many actually received operative treatment., Methods: Three hundred and thirty patients with an extra-articular fracture of the scapula at two level 1 trauma centers were retrospectively analyzed. Glenopolar angle, translation, angulation and medial/lateral displacement were measured on computed tomogaphy scans or radiographs to determine the theoretical operative treatment recommendation according to Cole's criteria., Results: Sixty-two patients (19%) had one or more radiographic indications for operative treatment, half of them had more than 20 mm of lateral displacement, and one fourth of them had substantial translation. No patients had operative treatment of the scapular body. Two patients had operative treatment of an acromion fracture, neither of which met radiographic criteria for surgery., Conclusions: At least in our centres, there is a striking discrepancy between theoretical and actual recommendations for surgery. There is clearly a need for more research to determine whether patients are being undertreated or whether the guidelines are too stringent.
- Published
- 2016
- Full Text
- View/download PDF
50. Thorax and pelvis kinematics during walking, a comparison between children with and without cerebral palsy: A systematic review.
- Author
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Swinnen E, Goten LV, De Koster B, and Degelaen M
- Subjects
- Adolescent, Child, Female, Humans, Male, Biomechanical Phenomena, Cerebral Palsy physiopathology, Pelvis physiology, Pelvis physiopathology, Thorax physiology, Thorax physiopathology
- Abstract
Background: Dysfunctional postural control and pathological thorax and pelvis motions are often observed in children with cerebral palsy (CP) and can be considered as an indicator of diminished dynamic stability., Objective: The aim of this study was to identify the differences between children with CP and typically developing children in three-dimensional thorax and pelvis kinematics during walking., Methods: Three electronic databases were searched by using different combinations of keywords. The methodological quality of the studies was assessed by two researchers with the Strobe quality checklist., Results: Ten studies (methodological quality: 32% to 74%) with in total 259 children with CP and 220 typically developing children (mean age: 7.6 to 13.6 year) were included. Compared to typically developing children, children with bilateral CP showed an increased range of motion of the thorax, pelvis and spine during walking. The results of the children with unilateral CP were less clear., Conclusion: In general, children with bilateral CP showed larger movement amplitudes of the trunk compared to children without CP. This increase in movement amplitudes could influence the dynamic stability of the body during walking. In children with unilateral CP, the results were less obvious and further research on this topic is required.
- Published
- 2016
- Full Text
- View/download PDF
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