750 results on '"Benoit, Joshua B."'
Search Results
2. Lipid metabolism dysfunction following symbiont elimination is linked to altered Kennedy pathway homeostasis
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Attardo, Geoffrey M, Benoit, Joshua B, Michalkova, Veronika, Kondragunta, Alekhya, Baumann, Aaron A, Weiss, Brian L, Malacrida, Anna, Scolari, Francesca, and Aksoy, Serap
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Biochemistry and Cell Biology ,Biological Sciences ,Bacteriology ,Physiology - Abstract
Lipid metabolism is critical for insect reproduction, especially for species that invest heavily in the early developmental stages of their offspring. The role of symbiotic bacteria during this process is understudied but likely essential. We examined the role of lipid metabolism during the interaction between the viviparous tsetse fly (Glossina morsitans morsitans) and its obligate endosymbiotic bacteria (Wigglesworthia glossinidia) during tsetse pregnancy. We observed increased CTP:phosphocholine cytidylyltransferase (cct1) expression during pregnancy, which is critical for phosphatidylcholine biosynthesis in the Kennedy pathway. Experimental removal of Wigglesworthia impaired lipid metabolism via disruption of the Kennedy pathway, yielding obese mothers whose developing progeny starve. Functional validation via experimental cct1 suppression revealed a phenotype similar to females lacking obligate Wigglesworthia symbionts. These results indicate that, in Glossina, symbiont-derived factors, likely B vitamins, are critical for the proper function of both lipid biosynthesis and lipolysis to maintain tsetse fly fecundity.
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- 2023
3. Reduced male fertility of an Antarctic mite following extreme heat stress could prompt localized population declines
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Benoit, Joshua B., Finch, Geoffrey, Ankrum, Andrea L., Niemantsverdriet, Jennifer, Paul, Bidisha, Kelley, Melissa, Gantz, J. D., Matter, Stephen F., Lee, Richard E., and Denlinger, David L.
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- 2023
4. Exploring the molecular makeup of support cells in insect camera eyes
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Rathore, Shubham, Stahl, Aaron, Benoit, Joshua B., and Buschbeck, Elke K.
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- 2023
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5. Warm Blood Meal Increases Digestion Rate and Milk Protein Production to Maximize Reproductive Output for the Tsetse Fly, Glossina morsitans
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Benoit, Joshua B, Lahondère, Chloé, Attardo, Geoffrey M, Michalkova, Veronika, Oyen, Kennan, Xiao, Yanyu, and Aksoy, Serap
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Zoology ,Biological Sciences ,Genetics ,Contraception/Reproduction ,tsetse ,digestion ,thermal stress ,reproduction - Abstract
The ingestion of blood represents a significant burden that immediately increases water, oxidative, and thermal stress, but provides a significant nutrient source to generate resources necessary for the development of progeny. Thermal stress has been assumed to solely be a negative byproduct that has to be alleviated to prevent stress. Here, we examined if the short thermal bouts incurred during a warm blood meal are beneficial to reproduction. To do so, we examined the duration of pregnancy and milk gland protein expression in the tsetse fly, Glossina morsitans, that consumed a warm or cool blood meal. We noted that an optimal temperature for blood ingestion yielded a reduction in the duration of pregnancy. This decline in the duration of pregnancy is due to increased rate of blood digestion when consuming warm blood. This increased digestion likely provided more energy that leads to increased expression of transcript for milk-associated proteins. The shorter duration of pregnancy is predicted to yield an increase in population growth compared to those that consume cool or above host temperatures. These studies provide evidence that consumption of a warm blood meal is likely beneficial for specific aspects of vector biology.
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- 2022
6. Publisher Correction: The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control
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Olafson, Pia U, Aksoy, Serap, Attardo, Geoffrey M, Buckmeier, Greta, Chen, Xiaoting, Coates, Craig J, Davis, Megan, Dykema, Justin, Emrich, Scott J, Friedrich, Markus, Holmes, Christopher J, Ioannidis, Panagiotis, Jansen, Evan N, Jennings, Emily C, Lawson, Daniel, Martinson, Ellen O, Maslen, Gareth L, Meisel, Richard P, Murphy, Terence D, Nayduch, Dana, Nelson, David R, Oyen, Kennan J, Raszick, Tyler J, Ribeiro, José MC, Robertson, Hugh M, Rosendale, Andrew J, Sackton, Timothy B, Saelao, Perot, Swiger, Sonja L, Sze, Sing-Hoi, Tarone, Aaron M, Taylor, David B, Warren, Wesley C, Waterhouse, Robert M, Weirauch, Matthew T, Werren, John H, Wilson, Richard K, Zdobnov, Evgeny M, and Benoit, Joshua B
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Microbiology ,Biological Sciences ,Developmental Biology ,Biological sciences - Abstract
Following publication of the original article [1], it was reported that the article copyright was incorrect. The correct copyright statement is: © This is a U.S. Government work and not under copyright protection in the US; foreign copyright protection may apply 2021. The original article [1] has been corrected.
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- 2021
7. The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control.
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Olafson, Pia U, Aksoy, Serap, Attardo, Geoffrey M, Buckmeier, Greta, Chen, Xiaoting, Coates, Craig J, Davis, Megan, Dykema, Justin, Emrich, Scott J, Friedrich, Markus, Holmes, Christopher J, Ioannidis, Panagiotis, Jansen, Evan N, Jennings, Emily C, Lawson, Daniel, Martinson, Ellen O, Maslen, Gareth L, Meisel, Richard P, Murphy, Terence D, Nayduch, Dana, Nelson, David R, Oyen, Kennan J, Raszick, Tyler J, Ribeiro, José MC, Robertson, Hugh M, Rosendale, Andrew J, Sackton, Timothy B, Saelao, Perot, Swiger, Sonja L, Sze, Sing-Hoi, Tarone, Aaron M, Taylor, David B, Warren, Wesley C, Waterhouse, Robert M, Weirauch, Matthew T, Werren, John H, Wilson, Richard K, Zdobnov, Evgeny M, and Benoit, Joshua B
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Chemoreceptor genes ,Gene regulation ,Insect adaptation ,Insect immunity ,Insect orthology ,Metabolic detoxification genes ,Muscid genomics ,Opsin gene duplication ,Stable fly genome ,Biological Sciences ,Developmental Biology - Abstract
BackgroundThe stable fly, Stomoxys calcitrans, is a major blood-feeding pest of livestock that has near worldwide distribution, causing an annual cost of over $2 billion for control and product loss in the USA alone. Control of these flies has been limited to increased sanitary management practices and insecticide application for suppressing larval stages. Few genetic and molecular resources are available to help in developing novel methods for controlling stable flies.ResultsThis study examines stable fly biology by utilizing a combination of high-quality genome sequencing and RNA-Seq analyses targeting multiple developmental stages and tissues. In conjunction, 1600 genes were manually curated to characterize genetic features related to stable fly reproduction, vector host interactions, host-microbe dynamics, and putative targets for control. Most notable was characterization of genes associated with reproduction and identification of expanded gene families with functional associations to vision, chemosensation, immunity, and metabolic detoxification pathways.ConclusionsThe combined sequencing, assembly, and curation of the male stable fly genome followed by RNA-Seq and downstream analyses provide insights necessary to understand the biology of this important pest. These resources and new data will provide the groundwork for expanding the tools available to control stable fly infestations. The close relationship of Stomoxys to other blood-feeding (horn flies and Glossina) and non-blood-feeding flies (house flies, medflies, Drosophila) will facilitate understanding of the evolutionary processes associated with development of blood feeding among the Cyclorrhapha.
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- 2021
8. Live-bearing cockroach genome reveals convergent evolutionary mechanisms linked to viviparity in insects and beyond
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Fouks, Bertrand, Harrison, Mark C., Mikhailova, Alina A., Marchal, Elisabeth, English, Sinead, Carruthers, Madeleine, Jennings, Emily C., Chiamaka, Ezemuoka L., Frigard, Ronja A., Pippel, Martin, Attardo, Geoffrey M., Benoit, Joshua B., Bornberg-Bauer, Erich, and Tobe, Stephen S.
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- 2023
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- View/download PDF
9. Brown marmorated stink bug, Halyomorpha halys (Stål), genome: putative underpinnings of polyphagy, insecticide resistance potential and biology of a top worldwide pest
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Sparks, Michael E, Bansal, Raman, Benoit, Joshua B, Blackburn, Michael B, Chao, Hsu, Chen, Mengyao, Cheng, Sammy, Childers, Christopher, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Elpidina, Elena N, Farrow, David W, Friedrich, Markus, Gibbs, Richard A, Hall, Brantley, Han, Yi, Hardy, Richard W, Holmes, Christopher J, Hughes, Daniel ST, Ioannidis, Panagiotis, Cheatle Jarvela, Alys M, Johnston, J Spencer, Jones, Jeffery W, Kronmiller, Brent A, Kung, Faith, Lee, Sandra L, Martynov, Alexander G, Masterson, Patrick, Maumus, Florian, Munoz-Torres, Monica, Murali, Shwetha C, Murphy, Terence D, Muzny, Donna M, Nelson, David R, Oppert, Brenda, Panfilio, Kristen A, Paula, Débora Pires, Pick, Leslie, Poelchau, Monica F, Qu, Jiaxin, Reding, Katie, Rhoades, Joshua H, Rhodes, Adelaide, Richards, Stephen, Richter, Rose, Robertson, Hugh M, Rosendale, Andrew J, Tu, Zhijian Jake, Velamuri, Arun S, Waterhouse, Robert M, Weirauch, Matthew T, Wells, Jackson T, Werren, John H, Worley, Kim C, Zdobnov, Evgeny M, and Gundersen-Rindal, Dawn E
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Genetics ,Biotechnology ,Human Genome ,Animals ,Ecosystem ,Gene Transfer ,Horizontal ,Genome Size ,Heteroptera ,Insect Proteins ,Insecticide Resistance ,Introduced Species ,Phylogeny ,Whole Genome Sequencing ,Brown marmorated stink bug genome ,Pentatomid genomics ,polyphagy ,chemoreceptors ,odorant binding proteins ,opsins ,cathepsins ,xenobiotic detoxification ,invasive species ,Biological Sciences ,Information and Computing Sciences ,Medical and Health Sciences ,Bioinformatics - Abstract
BackgroundHalyomorpha halys (Stål), the brown marmorated stink bug, is a highly invasive insect species due in part to its exceptionally high levels of polyphagy. This species is also a nuisance due to overwintering in human-made structures. It has caused significant agricultural losses in recent years along the Atlantic seaboard of North America and in continental Europe. Genomic resources will assist with determining the molecular basis for this species' feeding and habitat traits, defining potential targets for pest management strategies.ResultsAnalysis of the 1.15-Gb draft genome assembly has identified a wide variety of genetic elements underpinning the biological characteristics of this formidable pest species, encompassing the roles of sensory functions, digestion, immunity, detoxification and development, all of which likely support H. halys' capacity for invasiveness. Many of the genes identified herein have potential for biomolecular pesticide applications.ConclusionsAvailability of the H. halys genome sequence will be useful for the development of environmentally friendly biomolecular pesticides to be applied in concert with more traditional, synthetic chemical-based controls.
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- 2020
10. Gene content evolution in the arthropods
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Thomas, Gregg WC, Dohmen, Elias, Hughes, Daniel ST, Murali, Shwetha C, Poelchau, Monica, Glastad, Karl, Anstead, Clare A, Ayoub, Nadia A, Batterham, Phillip, Bellair, Michelle, Binford, Greta J, Chao, Hsu, Chen, Yolanda H, Childers, Christopher, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Duan, Jian J, Dugan, Shannon, Esposito, Lauren A, Friedrich, Markus, Garb, Jessica, Gasser, Robin B, Goodisman, Michael AD, Gundersen-Rindal, Dawn E, Han, Yi, Handler, Alfred M, Hatakeyama, Masatsugu, Hering, Lars, Hunter, Wayne B, Ioannidis, Panagiotis, Jayaseelan, Joy C, Kalra, Divya, Khila, Abderrahman, Korhonen, Pasi K, Lee, Carol Eunmi, Lee, Sandra L, Li, Yiyuan, Lindsey, Amelia RI, Mayer, Georg, McGregor, Alistair P, McKenna, Duane D, Misof, Bernhard, Munidasa, Mala, Munoz-Torres, Monica, Muzny, Donna M, Niehuis, Oliver, Osuji-Lacy, Nkechinyere, Palli, Subba R, Panfilio, Kristen A, Pechmann, Matthias, Perry, Trent, Peters, Ralph S, Poynton, Helen C, Prpic, Nikola-Michael, Qu, Jiaxin, Rotenberg, Dorith, Schal, Coby, Schoville, Sean D, Scully, Erin D, Skinner, Evette, Sloan, Daniel B, Stouthamer, Richard, Strand, Michael R, Szucsich, Nikolaus U, Wijeratne, Asela, Young, Neil D, Zattara, Eduardo E, Benoit, Joshua B, Zdobnov, Evgeny M, Pfrender, Michael E, Hackett, Kevin J, Werren, John H, Worley, Kim C, Gibbs, Richard A, Chipman, Ariel D, Waterhouse, Robert M, Bornberg-Bauer, Erich, Hahn, Matthew W, and Richards, Stephen
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Human Genome ,Genetics ,Biotechnology ,Generic health relevance ,Animals ,Arthropods ,DNA Methylation ,Evolution ,Molecular ,Genetic Speciation ,Genetic Variation ,Phylogeny ,Genome assembly ,Genomics ,Protein domains ,Gene content ,Evolution ,DNA methylation ,Environmental Sciences ,Biological Sciences ,Information and Computing Sciences ,Bioinformatics - Abstract
BackgroundArthropods comprise the largest and most diverse phylum on Earth and play vital roles in nearly every ecosystem. Their diversity stems in part from variations on a conserved body plan, resulting from and recorded in adaptive changes in the genome. Dissection of the genomic record of sequence change enables broad questions regarding genome evolution to be addressed, even across hyper-diverse taxa within arthropods.ResultsUsing 76 whole genome sequences representing 21 orders spanning more than 500 million years of arthropod evolution, we document changes in gene and protein domain content and provide temporal and phylogenetic context for interpreting these innovations. We identify many novel gene families that arose early in the evolution of arthropods and during the diversification of insects into modern orders. We reveal unexpected variation in patterns of DNA methylation across arthropods and examples of gene family and protein domain evolution coincident with the appearance of notable phenotypic and physiological adaptations such as flight, metamorphosis, sociality, and chemoperception.ConclusionsThese analyses demonstrate how large-scale comparative genomics can provide broad new insights into the genotype to phenotype map and generate testable hypotheses about the evolution of animal diversity.
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- 2020
11. Correction to: Genome-enabled insights into the biology of thrips as crop pests
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Rotenberg, Dorith, Baumann, Aaron A, Ben-Mahmoud, Sulley, Christiaens, Olivier, Dermauw, Wannes, Ioannidis, Panagiotis, Jacobs, Chris GC, Vargas Jentzsch, Iris M, Oliver, Jonathan E, Poelchau, Monica F, Rajarapu, Swapna Priya, Schneweis, Derek J, Snoeck, Simon, Taning, Clauvis NT, Wei, Dong, Widana Gamage, Shirani MK, Hughes, Daniel ST, Murali, Shwetha C, Bailey, Samuel T, Bejerman, Nicolas E, Holmes, Christopher J, Jennings, Emily C, Rosendale, Andrew J, Rosselot, Andrew, Hervey, Kaylee, Schneweis, Brandi A, Cheng, Sammy, Childers, Christopher, Simão, Felipe A, Dietzgen, Ralf G, Chao, Hsu, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Han, Yi, Lee, Sandra L, Muzny, Donna M, Qu, Jiaxin, Worley, Kim C, Benoit, Joshua B, Friedrich, Markus, Jones, Jeffery W, Panfilio, Kristen A, Park, Yoonseong, Robertson, Hugh M, Smagghe, Guy, Ullman, Diane E, van der Zee, Maurijn, Van Leeuwen, Thomas, Veenstra, Jan A, Waterhouse, Robert M, Weirauch, Matthew T, Werren, John H, Whitfield, Anna E, Zdobnov, Evgeny M, Gibbs, Richard A, and Richards, Stephen
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Biological Sciences ,Developmental Biology ,Biological sciences - Abstract
An amendment to this paper has been published and can be accessed via the original article.
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- 2020
12. Genome-enabled insights into the biology of thrips as crop pests
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Rotenberg, Dorith, Baumann, Aaron A, Ben-Mahmoud, Sulley, Christiaens, Olivier, Dermauw, Wannes, Ioannidis, Panagiotis, Jacobs, Chris GC, Vargas Jentzsch, Iris M, Oliver, Jonathan E, Poelchau, Monica F, Rajarapu, Swapna Priya, Schneweis, Derek J, Snoeck, Simon, Taning, Clauvis NT, Wei, Dong, Widana Gamage, Shirani MK, Hughes, Daniel ST, Murali, Shwetha C, Bailey, Samuel T, Bejerman, Nicolas E, Holmes, Christopher J, Jennings, Emily C, Rosendale, Andrew J, Rosselot, Andrew, Hervey, Kaylee, Schneweis, Brandi A, Cheng, Sammy, Childers, Christopher, Simão, Felipe A, Dietzgen, Ralf G, Chao, Hsu, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dugan, Shannon, Han, Yi, Lee, Sandra L, Muzny, Donna M, Qu, Jiaxin, Worley, Kim C, Benoit, Joshua B, Friedrich, Markus, Jones, Jeffery W, Panfilio, Kristen A, Park, Yoonseong, Robertson, Hugh M, Smagghe, Guy, Ullman, Diane E, van der Zee, Maurijn, Van Leeuwen, Thomas, Veenstra, Jan A, Waterhouse, Robert M, Weirauch, Matthew T, Werren, John H, Whitfield, Anna E, Zdobnov, Evgeny M, Gibbs, Richard A, and Richards, Stephen
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Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Human Genome ,Biotechnology ,Animals ,Crops ,Agricultural ,Feeding Behavior ,Food Chain ,Genome ,Insect ,Immunity ,Innate ,Life History Traits ,Perception ,Phylogeny ,Reproduction ,Thysanoptera ,Transcriptome ,Western flower thrips ,Hemipteroid assemblage ,Insect genomics ,Tospovirus ,Salivary glands ,Chemosensory receptors ,Opsins ,Detoxification ,Innate immunity ,Developmental Biology ,Biological sciences - Abstract
BackgroundThe western flower thrips, Frankliniella occidentalis (Pergande), is a globally invasive pest and plant virus vector on a wide array of food, fiber, and ornamental crops. The underlying genetic mechanisms of the processes governing thrips pest and vector biology, feeding behaviors, ecology, and insecticide resistance are largely unknown. To address this gap, we present the F. occidentalis draft genome assembly and official gene set.ResultsWe report on the first genome sequence for any member of the insect order Thysanoptera. Benchmarking Universal Single-Copy Ortholog (BUSCO) assessments of the genome assembly (size = 415.8 Mb, scaffold N50 = 948.9 kb) revealed a relatively complete and well-annotated assembly in comparison to other insect genomes. The genome is unusually GC-rich (50%) compared to other insect genomes to date. The official gene set (OGS v1.0) contains 16,859 genes, of which ~ 10% were manually verified and corrected by our consortium. We focused on manual annotation, phylogenetic, and expression evidence analyses for gene sets centered on primary themes in the life histories and activities of plant-colonizing insects. Highlights include the following: (1) divergent clades and large expansions in genes associated with environmental sensing (chemosensory receptors) and detoxification (CYP4, CYP6, and CCE enzymes) of substances encountered in agricultural environments; (2) a comprehensive set of salivary gland genes supported by enriched expression; (3) apparent absence of members of the IMD innate immune defense pathway; and (4) developmental- and sex-specific expression analyses of genes associated with progression from larvae to adulthood through neometaboly, a distinct form of maturation differing from either incomplete or complete metamorphosis in the Insecta.ConclusionsAnalysis of the F. occidentalis genome offers insights into the polyphagous behavior of this insect pest that finds, colonizes, and survives on a widely diverse array of plants. The genomic resources presented here enable a more complete analysis of insect evolution and biology, providing a missing taxon for contemporary insect genomics-based analyses. Our study also offers a genomic benchmark for molecular and evolutionary investigations of other Thysanoptera species.
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- 2020
13. Multi-level analysis of reproduction in an Antarctic midge identifies female and male accessory gland products that are altered by larval stress and impact progeny viability.
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Finch, Geoffrey, Nandyal, Sonya, Perretta, Carlie, Davies, Benjamin, Rosendale, Andrew J, Holmes, Christopher J, Gantz, JD, Spacht, Drew E, Bailey, Samuel T, Chen, Xiaoting, Oyen, Kennan, Didion, Elise M, Chakraborty, Souvik, Lee, Richard E, Denlinger, David L, Matter, Stephen F, Attardo, Geoffrey M, Weirauch, Matthew T, and Benoit, Joshua B
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The Antarctic midge, Belgica antarctica, is a wingless, non-biting midge endemic to Antarctica. Larval development requires at least 2 years, but adults live only 2 weeks. The nonfeeding adults mate in swarms and females die shortly after oviposition. Eggs are suspended in a gel of unknown composition that is expressed from the female accessory gland. This project characterizes molecular mechanisms underlying reproduction in this midge by examining differential gene expression in whole males, females, and larvae, as well as in male and female accessory glands. Functional studies were used to assess the role of the gel encasing the eggs, as well as the impact of stress on reproductive biology. RNA-seq analyses revealed sex- and development-specific gene sets along with those associated with the accessory glands. Proteomic analyses were used to define the composition of the egg-containing gel, which is generated during multiple developmental stages and derived from both the accessory gland and other female organs. Functional studies indicate the gel provides a larval food source as well as a buffer for thermal and dehydration stress. All of these function are critical to juvenile survival. Larval dehydration stress directly reduces production of storage proteins and key accessory gland components, a feature that impacts adult reproductive success. Modeling reveals that bouts of dehydration may have a significant impact on population growth. This work lays a foundation for further examination of reproduction in midges and provides new information related to general reproduction in dipterans. A key aspect of this work is that reproduction and stress dynamics, currently understudied in polar organisms, are likely to prove critical in determining how climate change will alter their survivability.
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- 2020
14. Sawfly genomes reveal evolutionary acquisitions that fostered the mega-radiation of parasitoid and eusocial Hymenoptera
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Oeyen, Jan Philip, Baa-Puyoulet, Patrice, Benoit, Joshua B, Beukeboom, Leo W, Bornberg-Bauer, Erich, Buttstedt, Anja, Calevro, Federica, Cash, Elizabeth I, Chao, Hsu, Charles, Hubert, Chen, Mei-Ju May, Childers, Christopher, Cridge, Andrew G, Dearden, Peter, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dolan, Amanda, Donath, Alexander, Dowling, Daniel, Dugan, Shannon, Duncan, Elizabeth, Elpidina, Elena N, Friedrich, Markus, Geuverink, Elzemiek, Gibson, Joshua D, Grath, Sonja, Grimmelikhuijzen, Cornelis JP, Große-Wilde, Ewald, Gudobba, Cameron, Han, Yi, Hansson, Bill S, Hauser, Frank, Hughes, Daniel ST, Ioannidis, Panagiotis, Jacquin-Joly, Emmanuelle, Jennings, Emily C, Jones, Jeffery W, Klasberg, Steffen, Lee, Sandra L, Lesný, Peter, Lovegrove, Mackenzie, Martin, Sebastian, Martynov, Alexander G, Mayer, Christoph, Montagné, Nicolas, Moris, Victoria C, Munoz-Torres, Monica, Murali, Shwetha Canchi, Muzny, Donna M, Oppert, Brenda, Parisot, Nicolas, Pauli, Thomas, Peters, Ralph S, Petersen, Malte, Pick, Christian, Persyn, Emma, Podsiadlowski, Lars, Poelchau, Monica F, Provataris, Panagiotis, Qu, Jiaxin, Reijnders, Maarten JMF, von Reumont, Björn Marcus, Rosendale, Andrew J, Simao, Felipe A, Skelly, John, Sotiropoulos, Alexandros G, Stahl, Aaron L, Sumitani, Megumi, Szuter, Elise M, Tidswell, Olivia, Tsitlakidis, Evangelos, Vedder, Lucia, Waterhouse, Robert M, Werren, John H, Wilbrandt, Jeanne, Worley, Kim C, Yamamoto, Daisuke S, van de Zande, Louis, Zdobnov, Evgeny M, Ziesmann, Tanja, Gibbs, Richard A, Richards, Stephen, Hatakeyama, Masatsugu, Misof, Bernhard, and Niehuis, Oliver
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Human Genome ,Genetics ,Life Below Water ,Amino Acid Sequence ,Animals ,Conserved Sequence ,DNA Transposable Elements ,Female ,Gene Dosage ,Genetic Speciation ,Genome ,Insect ,Glycoproteins ,Herbivory ,Host-Parasite Interactions ,Hymenoptera ,Immunity ,Insect Proteins ,Male ,Multigene Family ,Receptors ,Odorant ,Social Behavior ,Vision ,Ocular ,hexamerin ,major royal jelly protein ,microsynteny ,odorant receptor ,opsin ,phytophagy ,Biochemistry and Cell Biology ,Evolutionary Biology ,Developmental Biology - Abstract
The tremendous diversity of Hymenoptera is commonly attributed to the evolution of parasitoidism in the last common ancestor of parasitoid sawflies (Orussidae) and wasp-waisted Hymenoptera (Apocrita). However, Apocrita and Orussidae differ dramatically in their species richness, indicating that the diversification of Apocrita was promoted by additional traits. These traits have remained elusive due to a paucity of sawfly genome sequences, in particular those of parasitoid sawflies. Here, we present comparative analyses of draft genomes of the primarily phytophagous sawfly Athalia rosae and the parasitoid sawfly Orussus abietinus. Our analyses revealed that the ancestral hymenopteran genome exhibited traits that were previously considered unique to eusocial Apocrita (e.g., low transposable element content and activity) and a wider gene repertoire than previously thought (e.g., genes for CO2 detection). Moreover, we discovered that Apocrita evolved a significantly larger array of odorant receptors than sawflies, which could be relevant to the remarkable diversification of Apocrita by enabling efficient detection and reliable identification of hosts.
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- 2020
15. Molecular evolutionary trends and feeding ecology diversification in the Hemiptera, anchored by the milkweed bug genome
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Panfilio, Kristen A, Vargas Jentzsch, Iris M, Benoit, Joshua B, Erezyilmaz, Deniz, Suzuki, Yuichiro, Colella, Stefano, Robertson, Hugh M, Poelchau, Monica F, Waterhouse, Robert M, Ioannidis, Panagiotis, Weirauch, Matthew T, Hughes, Daniel ST, Murali, Shwetha C, Werren, John H, Jacobs, Chris GC, Duncan, Elizabeth J, Armisén, David, Vreede, Barbara MI, Baa-Puyoulet, Patrice, Berger, Chloé S, Chang, Chun-che, Chao, Hsu, Chen, Mei-Ju M, Chen, Yen-Ta, Childers, Christopher P, Chipman, Ariel D, Cridge, Andrew G, Crumière, Antonin JJ, Dearden, Peter K, Didion, Elise M, Dinh, Huyen, Doddapaneni, Harsha Vardhan, Dolan, Amanda, Dugan, Shannon, Extavour, Cassandra G, Febvay, Gérard, Friedrich, Markus, Ginzburg, Neta, Han, Yi, Heger, Peter, Holmes, Christopher J, Horn, Thorsten, Hsiao, Yi-min, Jennings, Emily C, Johnston, J Spencer, Jones, Tamsin E, Jones, Jeffery W, Khila, Abderrahman, Koelzer, Stefan, Kovacova, Viera, Leask, Megan, Lee, Sandra L, Lee, Chien-Yueh, Lovegrove, Mackenzie R, Lu, Hsiao-ling, Lu, Yong, Moore, Patricia J, Munoz-Torres, Monica C, Muzny, Donna M, Palli, Subba R, Parisot, Nicolas, Pick, Leslie, Porter, Megan L, Qu, Jiaxin, Refki, Peter N, Richter, Rose, Rivera-Pomar, Rolando, Rosendale, Andrew J, Roth, Siegfried, Sachs, Lena, Santos, M Emília, Seibert, Jan, Sghaier, Essia, Shukla, Jayendra N, Stancliffe, Richard J, Tidswell, Olivia, Traverso, Lucila, van der Zee, Maurijn, Viala, Séverine, Worley, Kim C, Zdobnov, Evgeny M, Gibbs, Richard A, and Richards, Stephen
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Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Biotechnology ,Human Genome ,Underpinning research ,1.1 Normal biological development and functioning ,Amino Acid Sequence ,Animals ,CYS2-HIS2 Zinc Fingers ,Evolution ,Molecular ,Feeding Behavior ,Gene Dosage ,Gene Expression Profiling ,Gene Transfer ,Horizontal ,Genes ,Homeobox ,Genome ,Insect ,Hemiptera ,Pigmentation ,Smell ,Transcription Factors ,Evolution of development ,Gene family evolution ,Gene structure ,Lateral gene transfer ,Phytophagy ,RNAi ,Transcription factors ,Environmental Sciences ,Information and Computing Sciences ,Bioinformatics - Abstract
BackgroundThe Hemiptera (aphids, cicadas, and true bugs) are a key insect order, with high diversity for feeding ecology and excellent experimental tractability for molecular genetics. Building upon recent sequencing of hemipteran pests such as phloem-feeding aphids and blood-feeding bed bugs, we present the genome sequence and comparative analyses centered on the milkweed bug Oncopeltus fasciatus, a seed feeder of the family Lygaeidae.ResultsThe 926-Mb Oncopeltus genome is well represented by the current assembly and official gene set. We use our genomic and RNA-seq data not only to characterize the protein-coding gene repertoire and perform isoform-specific RNAi, but also to elucidate patterns of molecular evolution and physiology. We find ongoing, lineage-specific expansion and diversification of repressive C2H2 zinc finger proteins. The discovery of intron gain and turnover specific to the Hemiptera also prompted the evaluation of lineage and genome size as predictors of gene structure evolution. Furthermore, we identify enzymatic gains and losses that correlate with feeding biology, particularly for reductions associated with derived, fluid nutrition feeding.ConclusionsWith the milkweed bug, we now have a critical mass of sequenced species for a hemimetabolous insect order and close outgroup to the Holometabola, substantially improving the diversity of insect genomics. We thereby define commonalities among the Hemiptera and delve into how hemipteran genomes reflect distinct feeding ecologies. Given Oncopeltus's strength as an experimental model, these new sequence resources bolster the foundation for molecular research and highlight technical considerations for the analysis of medium-sized invertebrate genomes.
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- 2019
16. Comparative genomic analysis of six Glossina genomes, vectors of African trypanosomes
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Attardo, Geoffrey M, Abd-Alla, Adly MM, Acosta-Serrano, Alvaro, Allen, James E, Bateta, Rosemary, Benoit, Joshua B, Bourtzis, Kostas, Caers, Jelle, Caljon, Guy, Christensen, Mikkel B, Farrow, David W, Friedrich, Markus, Hua-Van, Aurélie, Jennings, Emily C, Larkin, Denis M, Lawson, Daniel, Lehane, Michael J, Lenis, Vasileios P, Lowy-Gallego, Ernesto, Macharia, Rosaline W, Malacrida, Anna R, Marco, Heather G, Masiga, Daniel, Maslen, Gareth L, Matetovici, Irina, Meisel, Richard P, Meki, Irene, Michalkova, Veronika, Miller, Wolfgang J, Minx, Patrick, Mireji, Paul O, Ometto, Lino, Parker, Andrew G, Rio, Rita, Rose, Clair, Rosendale, Andrew J, Rota-Stabelli, Omar, Savini, Grazia, Schoofs, Liliane, Scolari, Francesca, Swain, Martin T, Takáč, Peter, Tomlinson, Chad, Tsiamis, George, Van Den Abbeele, Jan, Vigneron, Aurelien, Wang, Jingwen, Warren, Wesley C, Waterhouse, Robert M, Weirauch, Matthew T, Weiss, Brian L, Wilson, Richard K, Zhao, Xin, and Aksoy, Serap
- Subjects
Biological Sciences ,Genetics ,Vector-Borne Diseases ,Biotechnology ,Infectious Diseases ,Infection ,Good Health and Well Being ,Animals ,DNA Transposable Elements ,Drosophila melanogaster ,Female ,Gene Expression Regulation ,Genes ,Insect ,Genes ,X-Linked ,Genome ,Insect ,Genomics ,Geography ,Insect Proteins ,Insect Vectors ,Male ,Mutagenesis ,Insertional ,Phylogeny ,Repetitive Sequences ,Nucleic Acid ,Sequence Homology ,Amino Acid ,Synteny ,Trypanosoma ,Tsetse Flies ,Wolbachia ,Tsetse ,Trypanosomiasis ,Hematophagy ,Lactation ,Disease ,Neglected ,Symbiosis ,Environmental Sciences ,Information and Computing Sciences ,Bioinformatics - Abstract
BackgroundTsetse flies (Glossina sp.) are the vectors of human and animal trypanosomiasis throughout sub-Saharan Africa. Tsetse flies are distinguished from other Diptera by unique adaptations, including lactation and the birthing of live young (obligate viviparity), a vertebrate blood-specific diet by both sexes, and obligate bacterial symbiosis. This work describes the comparative analysis of six Glossina genomes representing three sub-genera: Morsitans (G. morsitans morsitans, G. pallidipes, G. austeni), Palpalis (G. palpalis, G. fuscipes), and Fusca (G. brevipalpis) which represent different habitats, host preferences, and vectorial capacity.ResultsGenomic analyses validate established evolutionary relationships and sub-genera. Syntenic analysis of Glossina relative to Drosophila melanogaster shows reduced structural conservation across the sex-linked X chromosome. Sex-linked scaffolds show increased rates of female-specific gene expression and lower evolutionary rates relative to autosome associated genes. Tsetse-specific genes are enriched in protease, odorant-binding, and helicase activities. Lactation-associated genes are conserved across all Glossina species while male seminal proteins are rapidly evolving. Olfactory and gustatory genes are reduced across the genus relative to other insects. Vision-associated Rhodopsin genes show conservation of motion detection/tracking functions and variance in the Rhodopsin detecting colors in the blue wavelength ranges.ConclusionsExpanded genomic discoveries reveal the genetics underlying Glossina biology and provide a rich body of knowledge for basic science and disease control. They also provide insight into the evolutionary biology underlying novel adaptations and are relevant to applied aspects of vector control such as trap design and discovery of novel pest and disease control strategies.
- Published
- 2019
17. Developmental stage and level of submersion in water impact the viability of lone star and winter tick eggs during flooding
- Author
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Alhawsawi, Maher Ramadan I., primary, Lewis, David A., additional, Frigard, Ronja A., additional, Smith, Ellen M., additional, Sivakumar, Jaishna, additional, Sharma, Ajay M., additional, Nantz, Adalynn R., additional, Sabile, Chloe, additional, Kennedy, Jasmine, additional, Loni, Rashi, additional, LeFefevre, Gabrielle, additional, Vaka, Akshita, additional, Leanza, Quinn, additional, Kelley, Melissa, additional, Stacey, Crystal L., additional, Santosh, Richa A., additional, Catlett, Nathan, additional, Cady, Tabitha L., additional, Rizvi, Raaidh S., additional, Wagner, Zach, additional, Olafson, Pia U., additional, and Benoit, Joshua B., additional
- Published
- 2024
- Full Text
- View/download PDF
18. A quick guide for student-driven community genome annotation
- Author
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Hosmani, Prashant S., Shippy, Teresa, Miller, Sherry, Benoit, Joshua B., Munoz-Torres, Monica, Flores, Mirella, Mueller, Lukas A., Wiersma-Koch, Helen, D'elia, Tom, Brown, Susan J., and Saha, Surya
- Subjects
Quantitative Biology - Genomics - Abstract
High quality gene models are necessary to expand the molecular and genetic tools available for a target organism, but these are available for only a handful of model organisms that have undergone extensive curation and experimental validation over the course of many years. The majority of gene models present in biological databases today have been identified in draft genome assemblies using automated annotation pipelines that are frequently based on orthologs from distantly related model organisms. Manual curation is time consuming and often requires substantial expertise, but is instrumental in improving gene model structure and identification. Manual annotation may seem to be a daunting and cost-prohibitive task for small research communities but involving undergraduates in community genome annotation consortiums can be mutually beneficial for both education and improved genomic resources. We outline a workflow for efficient manual annotation driven by a team of primarily undergraduate annotators. This model can be scaled to large teams and includes quality control processes through incremental evaluation. Moreover, it gives students an opportunity to increase their understanding of genome biology and to participate in scientific research in collaboration with peers and senior researchers at multiple institutions.
- Published
- 2018
- Full Text
- View/download PDF
19. Dual assessment of transcriptional and metabolomic responses in the American dog tick following exposure to different pesticides and repellents
- Author
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Pathak, Atit, Chakraborty, Souvik, Oyen, Kennan, Rosendale, Andrew J., and Benoit, Joshua B.
- Published
- 2022
- Full Text
- View/download PDF
20. A quick guide for student-driven community genome annotation
- Author
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Hosmani, Prashant S, Shippy, Teresa, Miller, Sherry, Benoit, Joshua B, Munoz-Torres, Monica, Flores-Gonzalez, Mirella, Mueller, Lukas A, Wiersma-Koch, Helen, D’Elia, Tom, Brown, Susan J, and Saha, Surya
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Biological Sciences ,Bioinformatics and Computational Biology ,Genetics ,Human Genome ,Biotechnology ,1.5 Resources and infrastructure (underpinning) ,Underpinning research ,Computational Biology ,Databases ,Genetic ,Genomics ,Guidelines as Topic ,Humans ,Models ,Genetic ,Molecular Sequence Annotation ,Students ,Mathematical Sciences ,Information and Computing Sciences ,Bioinformatics - Abstract
High quality gene models are necessary to expand the molecular and genetic tools available for a target organism, but these are available for only a handful of model organisms that have undergone extensive curation and experimental validation over the course of many years. The majority of gene models present in biological databases today have been identified in draft genome assemblies using automated annotation pipelines that are frequently based on orthologs from distantly related model organisms and usually have minor or major errors. Manual curation is time consuming and often requires substantial expertise, but is instrumental in improving gene model structure and identification. Manual annotation may seem to be a daunting and cost-prohibitive task for small research communities but involving undergraduates in community genome annotation consortiums can be mutually beneficial for both education and improved genomic resources. We outline a workflow for efficient manual annotation driven by a team of primarily undergraduate annotators. This model can be scaled to large teams and includes quality control processes through incremental evaluation. Moreover, it gives students an opportunity to increase their understanding of genome biology and to participate in scientific research in collaboration with peers and senior researchers at multiple institutions.
- Published
- 2019
21. Putting invertebrate lactation in context
- Author
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Benoit, Joshua B, Kölliker, Mathias, and Attardo, Geoffrey M
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Animals ,Female ,Invertebrates ,Lactation ,Milk ,Spiders ,General Science & Technology - Published
- 2019
22. The Glossina Genome Cluster: Comparative Genomic Analysis of the Vectors of African Trypanosomes
- Author
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Attardo, Geoffrey M, Abd-Alla, Adly MM, Acosta-Serrano, Alvaro, Allen, James E, Bateta, Rosemary, Benoit, Joshua B, Bourtzis, Kostas, Caers, Jelle, Caljon, Guy, Christensen, Mikkel B, Farrow, David W, Friedrich, Markus, Hua-Van, Aurélie, Jennings, Emily C, Larkin, Denis M, Lawson, Daniel, Lehane, Michael J, Lenis, Vasileios P, Lowy-Gallego, Ernesto, Macharia, Rosaline W, Malacrida, Anna R, Marco, Heather G, Masiga, Daniel, Maslen, Gareth L, Matetovici, Irina, Meisel, Richard P, Meki, Irene, Michalkova, Veronika, Miller, Wolfgang J, Minx, Patrick, Mireji, Paul O, Ometto, Lino, Parker, Andrew G, Rio, Rita, Rose, Clair, Rosendale, Andrew J, Rota-Stabelli, Omar, Savini, Grazia, Schoofs, Liliane, Scolari, Francesca, Swain, Martin T, Takáč, Peter, Tomlinson, Chad, Tsiamis, George, Van Den Abbeele, Jan, Vigneron, Aurelien, Wang, Jingwen, Warren, Wesley C, Waterhouse, Robert M, Weirauch, Matthew T, Weiss, Brian L, Wilson, Richard K, Zhao, Xin, and Aksoy, Serap
- Subjects
Biological Sciences ,Genetics ,Infectious Diseases ,Vector-Borne Diseases ,Biotechnology ,Infection ,Good Health and Well Being - Abstract
Background: Tsetse flies (Glossina sp.) are the sole vectors of human and animal trypanosomiasis throughout sub-Saharan Africa. Tsetse are distinguished from other Diptera by unique adaptations, including lactation and the birthing of live young (obligate viviparity), a vertebrate blood specific diet by both sexes and obligate bacterial symbiosis. This work describes comparative analysis of six Glossina genomes representing three sub-genera: Morsitans (G. morsitans morsitans (G.m. morsitans), G. pallidipes, G. austeni), Palpalis (G. palpalis, G. fuscipes) and Fusca (G. brevipalpis) which represent different habitats, host preferences and vectorial capacity. Results: Genomic analyses validate established evolutionary relationships and sub-genera. Syntenic analysis of Glossina relative to Drosophila melanogaster shows reduced structural conservation across the sex-linked X chromosome. Sex linked scaffolds show increased rates of female specific gene expression and lower evolutionary rates relative to autosome associated genes. Tsetse specific genes are enriched in protease, odorant binding and helicase activities. Lactation associated genes are conserved across all Glossina species while male seminal proteins are rapidly evolving. Olfactory and gustatory genes are reduced across the genus relative to other characterized insects. Vision associated Rhodopsin genes show conservation of motion detection/tracking functions and significant variance in the Rhodopsin detecting colors in the blue wavelength ranges. Conclusions: Expanded genomic discoveries reveal the genetics underlying Glossina biology and provide a rich body of knowledge for basic science and disease control. They also provide insight into the evolutionary biology underlying novel adaptations and are relevant to applied aspects of vector control such as trap design and discovery of novel pest and disease control strategies.
- Published
- 2019
23. A model species for agricultural pest genomics: the genome of the Colorado potato beetle, Leptinotarsa decemlineata (Coleoptera: Chrysomelidae).
- Author
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Schoville, Sean D, Chen, Yolanda H, Andersson, Martin N, Benoit, Joshua B, Bhandari, Anita, Bowsher, Julia H, Brevik, Kristian, Cappelle, Kaat, Chen, Mei-Ju M, Childers, Anna K, Childers, Christopher, Christiaens, Olivier, Clements, Justin, Didion, Elise M, Elpidina, Elena N, Engsontia, Patamarerk, Friedrich, Markus, García-Robles, Inmaculada, Gibbs, Richard A, Goswami, Chandan, Grapputo, Alessandro, Gruden, Kristina, Grynberg, Marcin, Henrissat, Bernard, Jennings, Emily C, Jones, Jeffery W, Kalsi, Megha, Khan, Sher A, Kumar, Abhishek, Li, Fei, Lombard, Vincent, Ma, Xingzhou, Martynov, Alexander, Miller, Nicholas J, Mitchell, Robert F, Munoz-Torres, Monica, Muszewska, Anna, Oppert, Brenda, Palli, Subba Reddy, Panfilio, Kristen A, Pauchet, Yannick, Perkin, Lindsey C, Petek, Marko, Poelchau, Monica F, Record, Éric, Rinehart, Joseph P, Robertson, Hugh M, Rosendale, Andrew J, Ruiz-Arroyo, Victor M, Smagghe, Guy, Szendrei, Zsofia, Thomas, Gregg WC, Torson, Alex S, Vargas Jentzsch, Iris M, Weirauch, Matthew T, Yates, Ashley D, Yocum, George D, Yoon, June-Sun, and Richards, Stephen
- Subjects
Animals ,Insect Proteins ,Transcription Factors ,DNA Transposable Elements ,Genetics ,Population ,Genomics ,Pest Control ,Biological ,Evolution ,Molecular ,Phylogeny ,Gene Expression Regulation ,RNA Interference ,Insecticide Resistance ,Multigene Family ,Agriculture ,Female ,Male ,Solanum tuberosum ,Genome ,Insect ,Host-Parasite Interactions ,Genetic Variation ,Molecular Sequence Annotation ,Coleoptera ,Genetics ,Population ,Pest Control ,Biological ,Evolution ,Molecular ,Genome ,Insect ,Biochemistry and Cell Biology ,Other Physical Sciences - Abstract
The Colorado potato beetle is one of the most challenging agricultural pests to manage. It has shown a spectacular ability to adapt to a variety of solanaceaeous plants and variable climates during its global invasion, and, notably, to rapidly evolve insecticide resistance. To examine evidence of rapid evolutionary change, and to understand the genetic basis of herbivory and insecticide resistance, we tested for structural and functional genomic changes relative to other arthropod species using genome sequencing, transcriptomics, and community annotation. Two factors that might facilitate rapid evolutionary change include transposable elements, which comprise at least 17% of the genome and are rapidly evolving compared to other Coleoptera, and high levels of nucleotide diversity in rapidly growing pest populations. Adaptations to plant feeding are evident in gene expansions and differential expression of digestive enzymes in gut tissues, as well as expansions of gustatory receptors for bitter tasting. Surprisingly, the suite of genes involved in insecticide resistance is similar to other beetles. Finally, duplications in the RNAi pathway might explain why Leptinotarsa decemlineata has high sensitivity to dsRNA. The L. decemlineata genome provides opportunities to investigate a broad range of phenotypes and to develop sustainable methods to control this widely successful pest.
- Published
- 2018
24. Rapid autophagic regression of the milk gland during involution is critical for maximizing tsetse viviparous reproductive output.
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Benoit, Joshua B, Michalkova, Veronika, Didion, Elise M, Xiao, Yanyu, Baumann, Aaron A, Attardo, Geoffrey M, and Aksoy, Serap
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Animal Structures ,Animals ,Tsetse Flies ,Gene Expression Profiling ,Fertility ,Autophagy ,Sexual Behavior ,Animal ,Tropical Medicine ,Biological Sciences ,Medical and Health Sciences - Abstract
Tsetse flies are important vectors of human and animal trypanosomiasis. Ability to reduce tsetse populations is an effective means of disease control. Lactation is an essential component of tsetse's viviparous reproductive physiology and requires a dramatic increase in the expression and synthesis of milk proteins by the milk gland organ in order to nurture larval growth. In between each gonotrophic cycle, tsetse ceases milk production and milk gland tubules undergo a nearly two-fold reduction in width (involution). In this study, we examined the role autophagy plays during tsetse fly milk gland involution and reproductive output. Autophagy genes show elevated expression in tissues associated with lactation, immediately before or within two hours post-parturition, and decline at 24-48h post-parturition. This expression pattern is inversely correlated with that of the milk gland proteins (lactation-specific protein coding genes) and the autophagy inhibitor fk506-bp1. Increased expression of Drosophila inhibitor of apoptosis 1, diap1, was also observed in the milk gland during involution, when it likely prevents apoptosis of milk gland cells. RNAi-mediated knockdown of autophagy related gene 8a (atg8a) prevented rapid milk gland autophagy during involution, prolonging gestation, and reducing fecundity in the subsequent gonotrophic cycle. The resultant inhibition of autophagy reduced the recovery of stored lipids during the dry (non-lactating) periods by 15-20%. Ecdysone application, similar to levels that occur immediately before birth, induced autophagy, and increased milk gland involution even before abortion. This suggests that the ecdysteroid peak immediately preceding parturition likely triggers milk gland autophagy. Population modeling reveals that a delay in involution would yield a negative population growth rate. This study indicates that milk gland autophagy during involution is critical to restore nutrient reserves and allow efficient transition between pregnancy cycles. Targeting post-birth phases of reproduction could be utilized as a novel mechanism to suppress tsetse populations and reduce trypanosomiasis.
- Published
- 2018
25. Thermal tolerance of mosquito eggs is associated with urban adaptation and human interactions
- Author
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Chakraborty, Souvik, primary, Zigmond, Emily, additional, Shah, Sher, additional, Sylla, Massamba, additional, Akorli, Jewelna, additional, Otoo, Sampson, additional, Rose, Noah H., additional, McBride, Carolyn S., additional, Armbruster, Peter A., additional, and Benoit, Joshua B., additional
- Published
- 2024
- Full Text
- View/download PDF
26. Intra-species quantification reveals differences in activity and sleep levels in the yellow fever mosquito,Aedes aegypti
- Author
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Ajayi, Oluwaseun, primary, Susanto, Emily E., additional, Wang, Lyn, additional, Kennedy, Jasmine, additional, Ledezma, Arturo, additional, Harris, Angeli'c, additional, Smith, Evan S., additional, Chakraborty, Souvik, additional, Wynne, Nicole E., additional, Sylla, Massamba, additional, Akorli, Jewelna, additional, Otoo, Sampson, additional, Rose, Noah H., additional, Vinauger, Clement, additional, and Benoit, Joshua B., additional
- Published
- 2024
- Full Text
- View/download PDF
27. Aedes albopictuscolonies from different geographic origins differ in their sleep and activity levels but not in the time of peak activity
- Author
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Wynne, Nicole E., primary, Applebach, Emilie, additional, Chandrasegaran, Karthikeyan, additional, Ajayi, Oluwaseun M., additional, Chakraborty, Souvik, additional, Bonizzoni, Mariangela, additional, Lahondère, Chloé, additional, Benoit, Joshua B., additional, and Vinauger, Clément, additional
- Published
- 2024
- Full Text
- View/download PDF
28. Tsetse Flies (Glossinidae)
- Author
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Benoit, Joshua B., primary, Attardo, Geoffrey M., additional, and Weiss, Brian L., additional
- Published
- 2022
- Full Text
- View/download PDF
29. Cross-tolerance and transcriptional shifts underlying abiotic stress in the seabird tick, Ixodes uriae
- Author
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Davies, Benjamin, Rosendale, Andrew J., Gantz, Josiah D., Lee, Jr., Richard E., Denlinger, David L., and Benoit, Joshua B.
- Published
- 2021
- Full Text
- View/download PDF
30. Do Mosquitoes Sleep?
- Author
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Ajayi, Oluwaseun M., Eilerts, Diane F., Bailey, Samuel T., Vinauger, Clément, and Benoit, Joshua B.
- Published
- 2020
- Full Text
- View/download PDF
31. The Spermatophore in Glossina morsitans morsitans: Insights into Male Contributions to Reproduction.
- Author
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Scolari, Francesca, Benoit, Joshua B, Michalkova, Veronika, Aksoy, Emre, Takac, Peter, Abd-Alla, Adly MM, Malacrida, Anna R, Aksoy, Serap, and Attardo, Geoffrey M
- Subjects
Uterus ,Spermatogonia ,Animals ,Tsetse Flies ,Insect Proteins ,Proteome ,Chromatography ,High Pressure Liquid ,Gene Expression Regulation ,Reproduction ,Databases ,Protein ,Female ,Male ,Tandem Mass Spectrometry ,Comparative Genomic Hybridization ,Chromatography ,High Pressure Liquid ,Databases ,Protein - Abstract
Male Seminal Fluid Proteins (SFPs) transferred during copulation modulate female reproductive physiology and behavior, impacting sperm storage/use, ovulation, oviposition, and remating receptivity. These capabilities make them ideal targets for developing novel methods of insect disease vector control. Little is known about the nature of SFPs in the viviparous tsetse flies (Diptera: Glossinidae), vectors of Human and Animal African trypanosomiasis. In tsetse, male ejaculate is assembled into a capsule-like spermatophore structure visible post-copulation in the female uterus. We applied high-throughput approaches to uncover the composition of the spermatophore in Glossina morsitans morsitans. We found that both male accessory glands and testes contribute to its formation. The male accessory glands produce a small number of abundant novel proteins with yet unknown functions, in addition to enzyme inhibitors and peptidase regulators. The testes contribute sperm in addition to a diverse array of less abundant proteins associated with binding, oxidoreductase/transferase activities, cytoskeletal and lipid/carbohydrate transporter functions. Proteins encoded by female-biased genes are also found in the spermatophore. About half of the proteins display sequence conservation relative to other Diptera, and low similarity to SFPs from other studied species, possibly reflecting both their fast evolutionary pace and the divergent nature of tsetse's viviparous biology.
- Published
- 2016
32. Unique features of a global human ectoparasite identified through sequencing of the bed bug genome.
- Author
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Benoit, Joshua B, Adelman, Zach N, Reinhardt, Klaus, Dolan, Amanda, Poelchau, Monica, Jennings, Emily C, Szuter, Elise M, Hagan, Richard W, Gujar, Hemant, Shukla, Jayendra Nath, Zhu, Fang, Mohan, M, Nelson, David R, Rosendale, Andrew J, Derst, Christian, Resnik, Valentina, Wernig, Sebastian, Menegazzi, Pamela, Wegener, Christian, Peschel, Nicolai, Hendershot, Jacob M, Blenau, Wolfgang, Predel, Reinhard, Johnston, Paul R, Ioannidis, Panagiotis, Waterhouse, Robert M, Nauen, Ralf, Schorn, Corinna, Ott, Mark-Christoph, Maiwald, Frank, Johnston, J Spencer, Gondhalekar, Ameya D, Scharf, Michael E, Peterson, Brittany F, Raje, Kapil R, Hottel, Benjamin A, Armisén, David, Crumière, Antonin Jean Johan, Refki, Peter Nagui, Santos, Maria Emilia, Sghaier, Essia, Viala, Sèverine, Khila, Abderrahman, Ahn, Seung-Joon, Childers, Christopher, Lee, Chien-Yueh, Lin, Han, Hughes, Daniel ST, Duncan, Elizabeth J, Murali, Shwetha C, Qu, Jiaxin, Dugan, Shannon, Lee, Sandra L, Chao, Hsu, Dinh, Huyen, Han, Yi, Doddapaneni, Harshavardhan, Worley, Kim C, Muzny, Donna M, Wheeler, David, Panfilio, Kristen A, Vargas Jentzsch, Iris M, Vargo, Edward L, Booth, Warren, Friedrich, Markus, Weirauch, Matthew T, Anderson, Michelle AE, Jones, Jeffery W, Mittapalli, Omprakash, Zhao, Chaoyang, Zhou, Jing-Jiang, Evans, Jay D, Attardo, Geoffrey M, Robertson, Hugh M, Zdobnov, Evgeny M, Ribeiro, Jose MC, Gibbs, Richard A, Werren, John H, Palli, Subba R, Schal, Coby, and Richards, Stephen
- Subjects
Animals ,Humans ,Bedbugs ,Ectoparasitic Infestations ,Insecticides ,Sequence Analysis ,DNA ,Feeding Behavior ,Gene Transfer ,Horizontal ,Insecticide Resistance ,Genome ,Host-Parasite Interactions ,Gene Transfer ,Horizontal ,Sequence Analysis ,DNA - Abstract
The bed bug, Cimex lectularius, has re-established itself as a ubiquitous human ectoparasite throughout much of the world during the past two decades. This global resurgence is likely linked to increased international travel and commerce in addition to widespread insecticide resistance. Analyses of the C. lectularius sequenced genome (650 Mb) and 14,220 predicted protein-coding genes provide a comprehensive representation of genes that are linked to traumatic insemination, a reduced chemosensory repertoire of genes related to obligate hematophagy, host-symbiont interactions, and several mechanisms of insecticide resistance. In addition, we document the presence of multiple putative lateral gene transfer events. Genome sequencing and annotation establish a solid foundation for future research on mechanisms of insecticide resistance, human-bed bug and symbiont-bed bug associations, and unique features of bed bug biology that contribute to the unprecedented success of C. lectularius as a human ectoparasite.
- Published
- 2016
33. Dehydration stress and Mayaro virus vector competence in Aedes aegypti
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Manzano-Alvarez, Jaime, primary, Terradas, Gerard, additional, Holmes, Christopher J., additional, Benoit, Joshua B., additional, and Rasgon, Jason L., additional
- Published
- 2023
- Full Text
- View/download PDF
34. Tyrosine transfer RNA levels and modifications during blood-feeding and vitellogenesis in the mosquito,Aedes aegypti
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Kelley, Melissa, primary, Holmes, Christopher J., additional, Herbert, Cassandra, additional, Rayhan, Asif, additional, Joves, Judd, additional, Frigard, Ronja, additional, Singh, Khwahish, additional, Limbach, Patrick A., additional, Addepalli, Balasubrahmanyam, additional, and Benoit, Joshua B., additional
- Published
- 2023
- Full Text
- View/download PDF
35. Dehydration yields distinct transcriptional shifts associated with glycogen metabolism and increases feeding in the western flower thrips, Frankliniella occidentalis
- Author
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Bailey, Samuel T., primary, Kondragunta, Alekhya, additional, Choi, Hyojin A., additional, Han, Jinlong, additional, Rotenberg, Dorith, additional, Ullman, Diane E., additional, and Benoit, Joshua B., additional
- Published
- 2023
- Full Text
- View/download PDF
36. Shifted levels of sleep and activity under darkness as mechanisms underlying ectoparasite resistance
- Author
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Benoit, Joshua B., primary, Ajayi, Oluwaseun M., additional, Webster, Ashley, additional, Grieshop, Karl, additional, Lewis, David, additional, Talbott, Hailie, additional, Bose, Joy, additional, and Polak, Michal, additional
- Published
- 2023
- Full Text
- View/download PDF
37. The Antarctic mite, Alaskozetes antarcticus, shares bacterial microbiome community membership but not abundance between adults and tritonymphs
- Author
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Holmes, Christopher J., Jennings, Emily C., Gantz, J. D., Spacht, Drew, Spangler, Austin A., Denlinger, David L., Lee, Jr., Richard E., Hamilton, Trinity L., and Benoit, Joshua B.
- Published
- 2019
- Full Text
- View/download PDF
38. Emerging roles of aquaporins in relation to the physiology of blood-feeding arthropods
- Author
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Benoit, Joshua B, Hansen, Immo A, Szuter, Elise M, Drake, Lisa L, Burnett, Denielle L, and Attardo, Geoffrey M
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Biological Sciences ,Genetics ,Amino Acid Sequence ,Animals ,Aquaporins ,Arthropods ,Eating ,Reproduction ,Saliva ,Sequence Alignment ,Stress ,Physiological ,Hematophagy ,Stress tolerance ,Digestion ,Saliva generation ,Diuresis ,Biochemistry and Cell Biology ,Physiology ,Zoology - Abstract
Aquaporins (AQPs) are proteins that span plasma membranes allowing the movement of water and small solutes into or out of cells. The type, expression levels and activity of AQPs play a major role in the relative permeability of each cell to water or other solutes. Research on arthropod AQPs has expanded in the last 10 years due to the completion of several arthropod genome projects and the increased availability of genetic information accessible through other resources such as de novo transcriptome assemblies. In particular, there has been significant advancement in elucidating the roles that AQPs serve in relation to the physiology of blood-feeding arthropods of medical importance. The focus of this review is upon the significance of AQPs in relation to hematophagy in arthropods. This will be accomplished via a narrative describing AQP functions during the life history of hematophagic arthropods that includes the following critical phases: (1) Saliva production necessary to blood feeding, (2) Intake and excretion of water during blood digestion, (3) Reproduction and egg development and (4) Off-host environmental stress tolerance. The concentration on these phases will highlight known vulnerabilities in the biology of hematophagic arthropods that could be used to develop novel control strategies as well as research topics that have yet to be examined.
- Published
- 2014
39. Vitamin B6 Generated by Obligate Symbionts Is Critical for Maintaining Proline Homeostasis and Fecundity in Tsetse Flies
- Author
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Michalkova, Veronika, Benoit, Joshua B, Weiss, Brian L, Attardo, Geoffrey M, and Aksoy, Serap
- Subjects
Biochemistry and Cell Biology ,Biological Sciences ,Genetics ,Vector-Borne Diseases ,Nutrition ,Infectious Diseases ,Animals ,Fertility ,Gene Expression Profiling ,Homeostasis ,Proline ,Symbiosis ,Transaminases ,Tsetse Flies ,Vitamin B 6 ,Wigglesworthia ,Microbiology ,Medical microbiology - Abstract
The viviparous tsetse fly utilizes proline as a hemolymph-borne energy source. In tsetse, biosynthesis of proline from alanine involves the enzyme alanine-glyoxylate aminotransferase (AGAT), which requires pyridoxal phosphate (vitamin B6) as a cofactor. This vitamin can be synthesized by tsetse's obligate symbiont, Wigglesworthia glossinidia. In this study, we examined the role of Wigglesworthia-produced vitamin B6 for maintenance of proline homeostasis, specifically during the energetically expensive lactation period of the tsetse's reproductive cycle. We found that expression of agat, as well as genes involved in vitamin B6 metabolism in both host and symbiont, increases in lactating flies. Removal of symbionts via antibiotic treatment of flies (aposymbiotic) led to hypoprolinemia, reduced levels of vitamin B6 in lactating females, and decreased fecundity. Proline homeostasis and fecundity recovered partially when aposymbiotic tsetse were fed a diet supplemented with either yeast or Wigglesworthia extracts. RNA interference-mediated knockdown of agat in wild-type flies reduced hemolymph proline levels to that of aposymbiotic females. Aposymbiotic flies treated with agat short interfering RNA (siRNA) remained hypoprolinemic even upon dietary supplementation with microbial extracts or B vitamins. Flies infected with parasitic African trypanosomes display lower hemolymph proline levels, suggesting that the reduced fecundity observed in parasitized flies could result from parasite interference with proline homeostasis. This interference could be manifested by competition between tsetse and trypanosomes for vitamins, proline, or other factors involved in their synthesis. Collectively, these results indicate that the presence of Wigglesworthia in tsetse is critical for the maintenance of proline homeostasis through vitamin B6 production.
- Published
- 2014
40. Genome Sequence of the Tsetse Fly (Glossina morsitans): Vector of African Trypanosomiasis
- Author
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Initiative, International Glossina Genome, Attardo, Geoffrey M, Abila, Patrick P, Auma, Joanna E, Baumann, Aaron A, Benoit, Joshua B, Brelsfoard, Corey L, Ribeiro, José MC, Cotton, James A, Pham, Daphne QD, Darby, Alistair C, Van Den Abbeele, Jan, Denlinger, David L, Field, Linda M, Nyanjom, Steven RG, Gaunt, Michael W, Geiser, Dawn L, Gomulski, Ludvik M, Haines, Lee R, Hansen, Immo A, Jones, Jeffery W, Kibet, Caleb K, Kinyua, Johnson K, Larkin, Denis M, Lehane, Michael J, Rio, Rita VM, Macdonald, Sandy J, Macharia, Rosaline W, Malacrida, Anna R, Marco, Heather G, Marucha, Kevin K, Masiga, Daniel K, Meuti, Megan E, Mireji, Paul O, Obiero, George FO, Koekemoer, Jacobus JO, Okoro, Chinyere K, Omedo, Irene A, Osamor, Victor C, Balyeidhusa, Apollo SP, Peyton, Justin T, Price, David P, Quail, Michael A, Ramphul, Urvashi N, Rawlings, Neil D, Riehle, Michael A, Robertson, Hugh M, Sanders, Mandy J, Scott, Maxwell J, Dashti, Zahra Jalali Sefid, Snyder, Anna K, Srivastava, Tulika P, Stanley, Eleanor J, Swain, Martin T, Hughes, Daniel ST, Tarone, Aaron M, Taylor, Todd D, Telleria, Erich L, Thomas, Gavin H, Walshe, Deirdre P, Wilson, Richard K, Winzerling, Joy J, Acosta-Serrano, Alvaro, Aksoy, Serap, Arensburger, Peter, Aslett, Martin, Bateta, Rosemary, Benkahla, Alia, Berriman, Matthew, Bourtzis, Kostas, Caers, Jelle, Caljon, Guy, Christoffels, Alan, Falchetto, Marco, Friedrich, Markus, Fu, Shuhua, Gäde, Gerd, Githinji, George, Gregory, Richard, Hall, Neil, Harkins, Gordon, Hattori, Masahira, Hertz-Fowler, Christiane, Hide, Winston, Hu, Wanqi, Imanishi, Tadashi, Inoue, Noboru, Jonas, Mario, Kawahara, Yoshihiro, Koffi, Mathurin, Kruger, Adele, Lawson, Daniel, Lehane, Stella, Lehväslaiho, Heikki, Luiz, Thiago, Makgamathe, Mmule, Malele, Imna, Manangwa, Oliver, Manga, Lucien, and Megy, Karyn
- Subjects
Vector-Borne Diseases ,Genetics ,Prevention ,Infectious Diseases ,Biotechnology ,2.2 Factors relating to the physical environment ,Aetiology ,Infection ,Good Health and Well Being ,Animals ,Blood ,Feeding Behavior ,Female ,Genes ,Insect ,Genome ,Insect ,Insect Proteins ,Insect Vectors ,Microbiota ,Molecular Sequence Annotation ,Molecular Sequence Data ,Reproduction ,Salivary Glands ,Sensation ,Sequence Analysis ,DNA ,Symbiosis ,Trypanosoma ,Trypanosomiasis ,African ,Tsetse Flies ,Wolbachia ,International Glossina Genome Initiative ,General Science & Technology - Abstract
Tsetse flies are the sole vectors of human African trypanosomiasis throughout sub-Saharan Africa. Both sexes of adult tsetse feed exclusively on blood and contribute to disease transmission. Notable differences between tsetse and other disease vectors include obligate microbial symbioses, viviparous reproduction, and lactation. Here, we describe the sequence and annotation of the 366-megabase Glossina morsitans morsitans genome. Analysis of the genome and the 12,308 predicted protein-encoding genes led to multiple discoveries, including chromosomal integrations of bacterial (Wolbachia) genome sequences, a family of lactation-specific proteins, reduced complement of host pathogen recognition proteins, and reduced olfaction/chemosensory associated genes. These genome data provide a foundation for research into trypanosomiasis prevention and yield important insights with broad implications for multiple aspects of tsetse biology.
- Published
- 2014
41. The homeodomain protein ladybird late regulates synthesis of milk proteins during pregnancy in the tsetse fly (Glossina morsitans).
- Author
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Attardo, Geoffrey M, Benoit, Joshua B, Michalkova, Veronika, Patrick, Kevin R, Krause, Tyler B, and Aksoy, Serap
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Animals ,Tsetse Flies ,Milk Proteins ,Homeodomain Proteins ,Insect Proteins ,Computational Biology ,Molecular Biology ,Gene Expression Regulation ,Pregnancy ,Transgenes ,Female ,Transcriptome ,Biological Sciences ,Medical and Health Sciences ,Tropical Medicine - Abstract
Regulation of tissue and development specific gene expression patterns underlies the functional specialization of organs in multi-cellular organisms. In the viviparous tsetse fly (Glossina), the female accessory gland is specialized to generate nutrients in the form of a milk-like secretion to support growth of intrauterine larva. Multiple milk protein genes are expressed specifically in the female accessory gland and are tightly linked with larval development. Disruption of milk protein synthesis deprives developing larvae of nutrients and results in extended larval development and/or in abortion. The ability to cause such a disruption could be utilized as a tsetse control strategy. Here we identify and delineate the regulatory sequence of a major milk protein gene (milk gland protein 1:mgp1) by utilizing a combination of molecular techniques in tsetse, Drosophila transgenics, transcriptomics and in silico sequence analyses. The function of this promoter is conserved between tsetse and Drosophila. In transgenic Drosophila the mgp1 promoter directs reporter gene expression in a tissue and stage specific manner orthologous to that of Glossina. Analysis of the minimal required regulatory region of mgp1, and the regulatory regions of other Glossina milk proteins identified putative homeodomain protein binding sites as the sole common feature. Annotation and expression analysis of Glossina homeodomain proteins identified ladybird late (lbl) as being accessory gland/fat body specific and differentially expressed between lactating/non-lactating flies. Knockdown of lbl in tsetse resulted in a significant reduction in transcript abundance of multiple milk protein genes and in a significant loss of fecundity. The role of Lbl in adult reproductive physiology is previously unknown. These results suggest that Lbl is part of a conserved reproductive regulatory system that could have implications beyond tsetse to other vector insects such as mosquitoes. This system is critical for tsetse fecundity and provides a potential target for development of a reproductive inhibitor.
- Published
- 2014
42. A novel highly divergent protein family identified from a viviparous insect by RNA-seq analysis: a potential target for tsetse fly-specific abortifacients.
- Author
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Benoit, Joshua B, Attardo, Geoffrey M, Michalkova, Veronika, Krause, Tyler B, Bohova, Jana, Zhang, Qirui, Baumann, Aaron A, Mireji, Paul O, Takáč, Peter, Denlinger, David L, Ribeiro, Jose M, and Aksoy, Serap
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Animals ,Tsetse Flies ,Abortifacient Agents ,Milk Proteins ,Insect Proteins ,Proteome ,RNA ,Gene Expression Profiling ,Sequence Analysis ,RNA ,Phylogeny ,Amino Acid Sequence ,Reproduction ,Fertility ,Lactation ,Genes ,Insect ,Introns ,Exons ,Female ,Male ,Lipid Metabolism ,Gene Knockdown Techniques ,Transcriptome ,Genes ,Insect ,Sequence Analysis ,Genetics ,Developmental Biology - Abstract
In tsetse flies, nutrients for intrauterine larval development are synthesized by the modified accessory gland (milk gland) and provided in mother's milk during lactation. Interference with at least two milk proteins has been shown to extend larval development and reduce fecundity. The goal of this study was to perform a comprehensive characterization of tsetse milk proteins using lactation-specific transcriptome/milk proteome analyses and to define functional role(s) for the milk proteins during lactation. Differential analysis of RNA-seq data from lactating and dry (non-lactating) females revealed enrichment of transcripts coding for protein synthesis machinery, lipid metabolism and secretory proteins during lactation. Among the genes induced during lactation were those encoding the previously identified milk proteins (milk gland proteins 1-3, transferrin and acid sphingomyelinase 1) and seven new genes (mgp4-10). The genes encoding mgp2-10 are organized on a 40 kb syntenic block in the tsetse genome, have similar exon-intron arrangements, and share regions of amino acid sequence similarity. Expression of mgp2-10 is female-specific and high during milk secretion. While knockdown of a single mgp failed to reduce fecundity, simultaneous knockdown of multiple variants reduced milk protein levels and lowered fecundity. The genomic localization, gene structure similarities, and functional redundancy of MGP2-10 suggest that they constitute a novel highly divergent protein family. Our data indicates that MGP2-10 function both as the primary amino acid resource for the developing larva and in the maintenance of milk homeostasis, similar to the function of the mammalian casein family of milk proteins. This study underscores the dynamic nature of the lactation cycle and identifies a novel family of lactation-specific proteins, unique to Glossina sp., that are essential to larval development. The specificity of MGP2-10 to tsetse and their critical role during lactation suggests that these proteins may be an excellent target for tsetse-specific population control approaches.
- Published
- 2014
43. Aquaporins are critical for provision of water during lactation and intrauterine progeny hydration to maintain tsetse fly reproductive success.
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Benoit, Joshua B, Hansen, Immo A, Attardo, Geoffrey M, Michalková, Veronika, Mireji, Paul O, Bargul, Joel L, Drake, Lisa L, Masiga, Daniel K, and Aksoy, Serap
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Animals ,Tsetse Flies ,Water ,Aquaporins ,Insect Proteins ,Gene Expression Profiling ,Reproduction ,Lactation ,Pregnancy ,Female ,Gene Knockdown Techniques ,Biological Sciences ,Medical and Health Sciences ,Tropical Medicine - Abstract
Tsetse flies undergo drastic fluctuations in their water content throughout their adult life history due to events such as blood feeding, dehydration and lactation, an essential feature of the viviparous reproductive biology of tsetse. Aquaporins (AQPs) are transmembrane proteins that allow water and other solutes to permeate through cellular membranes. Here we identify tsetse aquaporin (AQP) genes, examine their expression patterns under different physiological conditions (blood feeding, lactation and stress response) and perform functional analysis of three specific genes utilizing RNA interference (RNAi) gene silencing. Ten putative aquaporins were identified in the Glossina morsitans morsitans (Gmm) genome, two more than has been previously documented in any other insect. All organs, tissues, and body parts examined had distinct AQP expression patterns. Two AQP genes, gmmdripa and gmmdripb ( = gmmaqp1a and gmmaqp1b) are highly expressed in the milk gland/fat body tissues. The whole-body transcript levels of these two genes vary over the course of pregnancy. A set of three AQPs (gmmaqp5, gmmaqp2a, and gmmaqp4b) are expressed highly in the Malpighian tubules. Knockdown of gmmdripa and gmmdripb reduced the efficiency of water loss following a blood meal, increased dehydration tolerance and reduced heat tolerance of adult females. Knockdown of gmmdripa extended pregnancy length, and gmmdripb knockdown resulted in extended pregnancy duration and reduced progeny production. We found that knockdown of AQPs increased tsetse milk osmolality and reduced the water content in developing larva. Combined knockdown of gmmdripa, gmmdripb and gmmaqp5 extended pregnancy by 4-6 d, reduced pupal production by nearly 50%, increased milk osmolality by 20-25% and led to dehydration of feeding larvae. Based on these results, we conclude that gmmDripA and gmmDripB are critical for diuresis, stress tolerance and intrauterine lactation through the regulation of water and/or other uncharged solutes.
- Published
- 2014
44. Amelioration of reproduction-associated oxidative stress in a viviparous insect is critical to prevent reproductive senescence.
- Author
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Michalkova, Veronika, Benoit, Joshua B, Attardo, Geoffrey M, Medlock, Jan, and Aksoy, Serap
- Subjects
Animals ,Tsetse Flies ,Superoxide Dismutase ,Insect Proteins ,Protein Biosynthesis ,Oxidative Stress ,Aging ,Fertility ,Lactation ,Female ,Viviparity ,Nonmammalian ,Gene Knockdown Techniques ,Viviparity ,Nonmammalian ,General Science & Technology - Abstract
Impact of reproductive processes upon female health has yielded conflicting results; particularly in relation to the role of reproduction-associated stress. We used the viviparous tsetse fly to determine if lactation, birth and involution lead to damage from oxidative stress (OS) that impairs subsequent reproductive cycles. Tsetse females carry an intrauterine larva to full term at each pregnancy cycle, and lactate to nourish them with milk secretions produced by the accessory gland ( = milk gland) organ. Unlike most K-strategists, tsetse females lack an apparent period of reproductive senescence allowing the production of 8-10 progeny over their entire life span. In a lactating female, over 47% of the maternal transcriptome is associated with the generation of milk proteins. The resulting single larval offspring weighs as much as the mother at birth. In studying this process we noted an increase in specific antioxidant enzyme (AOE) transcripts and enzymatic activity at critical times during lactation, birth and involution in the milk gland/fat body organ and the uterus. Suppression of superoxide dismutase (sod) decreased fecundity in subsequent reproductive cycles in young mothers and nearly abolished fecundity in geriatric females. Loss of fecundity was in part due to the inability of the mother to produce adequate milk to support larval growth. Longevity was also impaired after sod knockdown. Generation of OS in virgin females through exogenous treatment with hydrogen peroxide at times corresponding to pregnancy intervals reduced survival, which was exacerbated by sod knockdown. AOE expression may prevent oxidative damage associated with the generation of nutrients by the milk gland, parturition and milk gland breakdown. Our results indicate that prevention of OS is essential for females to meet the growing nutritional demands of juveniles during pregnancy and to repair the damage that occurs at birth. This process is particularly important for females to remain fecund during the latter portion of their lifetime.
- Published
- 2014
45. Dehydration yields distinct transcriptional shifts associated with glycogen metabolism and increases feeding in the western flower thrips, Frankliniella occidentalis.
- Author
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Bailey, Samuel T., Kondragunta, Alekhya, Choi, Hyojin A., Han, Jinlong, Rotenberg, Dorith, Ullman, Diane E., and Benoit, Joshua B.
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FRANKLINIELLA occidentalis ,THRIPS ,GLYCOGEN ,CARBOHYDRATE metabolism ,PHYTOPATHOGENIC microorganisms ,CUT flowers ,POLLINATION ,POLLINATORS - Abstract
We examined water balance characteristics and the influence of desiccating conditions on the physiology and behavior of adult western flower thrips, Frankliniella occidentalis (Pergande) (Thysanoptera: Thripidae). Western flower thrips are globally invasive and likely to contend with shifts in water availability across their expansive geographic range. Basic water balance characteristics, including water mass and dry mass, were established for adult males and females, revealing a distinct sexual dimorphism wherein females are larger, and males retain a larger percentage of their body mass as water. Males lose relative water mass more quickly and their survival times are shorter compared to females. RNA‐seq analysis identified significant enrichment of a multitude of factors including carbohydrate transport and metabolism in dehydrated males and females. This was validated by altered glycogen levels, suggesting a rapid depletion in glycogen during dehydration. The probability of thrips feeding significantly increases when desiccation occurs, potentially to replenish water content and nutrient reserves. Our results establish the fundamental water balance characteristics of adult thrips and indicate that dehydration significantly influences the survivorship and feeding behavior of thrips; all of which being crucial factors that contribute to their capacity as vectors for plant pathogens. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
46. Egg hatching success is influenced by the time of thermal stress in four hard tick species
- Author
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Ajayi, Oluwaseun M, primary, Oyen, Kennan J, additional, Davies, Benjamin, additional, Finch, Geoffrey, additional, Piller, Benjamin D, additional, Harmeyer, Alison A, additional, Wendeln, Katherine, additional, Perretta, Carlie, additional, Rosendale, Andrew J, additional, and Benoit, Joshua B, additional
- Published
- 2023
- Full Text
- View/download PDF
47. Genome sequence of Asaia bogorensis strain SC1 isolated from an Aedes aegypti mosquito crop
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Chakraborty, Souvik, primary, Benoit, Joshua B., additional, Rowe, Annette R., additional, and Sackett, Joshua D., additional
- Published
- 2023
- Full Text
- View/download PDF
48. Low and high thermal tolerance characteristics for unfed larvae of the winter tick Dermacentor albipictus (Acari: Ixodidae) with special reference to moose
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Holmes, Christopher J., Dobrotka, Cameron J., Farrow, David W., Rosendale, Andrew J., Benoit, Joshua B., Pekins, Peter J., and Yoder, Jay A.
- Published
- 2018
- Full Text
- View/download PDF
49. Sex- and developmental-specific transcriptomic analyses of the Antarctic mite, Alaskozetes antarcticus, reveal transcriptional shifts underlying oribatid mite reproduction
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Meibers, Hannah E., Finch, Geoffrey, Gregg, Robert T., Glenn, Sierra, Assani, Keavash D., Jennings, Emily C., Davies, Benjamin, Rosendale, Andrew J., Holmes, Christopher J., Gantz, J. D., Spacht, Drew E., Lee, Jr., Richard E., Denlinger, David L., Weirauch, Matthew T., and Benoit, Joshua B.
- Published
- 2019
- Full Text
- View/download PDF
50. Genomic analyses of a livestock pest, the New World screwworm, find potential targets for genetic control programs
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Scott, Maxwell J., Benoit, Joshua B., Davis, Rebecca J., Bailey, Samuel T., Varga, Virag, Martinson, Ellen O., Hickner, Paul V., Syed, Zainulabeuddin, Cardoso, Gisele A., Torres, Tatiana T., Weirauch, Matthew T., Scholl, Elizabeth H., Phillippy, Adam M., Sagel, Agustin, Vasquez, Mario, Quintero, Gladys, and Skoda, Steven R.
- Published
- 2020
- Full Text
- View/download PDF
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