38 results on '"Baruah KK"'
Search Results
2. Effects of low-density lipoproteins as additive on quality parameters and oxidative stress following cryopreservation of mithun (Bos frontalis ) spermatozoa
- Author
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Perumal, P, primary, Srivastava, SK, additional, Ghosh, SK, additional, Baruah, KK, additional, Bag, S, additional, Rajoria, JS, additional, Kumar, K, additional, Rajkhowa, C, additional, Pande, M, additional, and Srivastava, N, additional
- Published
- 2016
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3. Exploring Climate Change Adaptation Practices and Agricultural Livelihoods among Rice Farmers of the Brahmaputra Valley in Northeast India.
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Kalita B, Kumar CJ, Hazarika N, Baruah KK, and Borah L
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- India, Humans, Surveys and Questionnaires, Droughts, Middle Aged, Climate Change, Oryza, Farmers, Agriculture methods
- Abstract
Global climate change has seriously threatened agriculture and connected sectors, especially in developing countries like India. The Brahmaputra Valley in Assam, Northeast India, is vulnerable to climate change due to its agrarian economy, fragile geo-ecological setting, recurrent floods and droughts, and poor socioeconomic conditions of the farmers. The climate-induced hindrances faced by the rice farming community of this region and the local adaptation practices they employ have not been adequately studied. Therefore, we carried out a survey among 635 rice farmers across four agro-climatic zones of Assam, namely the Upper Brahmaputra Valley Zone, North Bank Plain Zone, Central Brahmaputra Valley Zone, and Lower Brahmaputra Valley Zone, to understand how they perceive and respond to climatic changes. The survey revealed that all the respondents have perceived an increase in ambient temperature, and 65% of the respondents have perceived a slight change in rainfall characteristics over the years. Most farmers reported adjusting the existing farming practices and livelihood choices to adapt to the changing climate. Farming adjustments were made mainly in terms of field preparation and management of water, rice variety, nutrients, and pests. Environmental variables like rainfall, flood, drought, and pest level, and socioeconomic variables like family size, education, farming experience, training, digital media exposure, and land area were found to influence farmers' adaptation choices. The findings imply that policies to strengthen flood, drought, pest management, education, land-use planning, agricultural training, and digital media applications in agriculture are needed for effective climate change adaptation in this region., (© 2024. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)
- Published
- 2024
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4. Development of a novel sensitive single-tube nested PCR assay for the detection of African swine fever virus.
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Milton AAP, Das S, Momin KM, Prasad MCB, Khan S, Priya GB, Ghatak S, Sen A, and Baruah KK
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- Animals, Swine, DNA Primers genetics, DNA, Viral genetics, Limit of Detection, African Swine Fever Virus genetics, African Swine Fever Virus isolation & purification, African Swine Fever diagnosis, African Swine Fever virology, Polymerase Chain Reaction methods, Sensitivity and Specificity
- Abstract
African swine fever (ASF) is a highly fatal and contagious viral disease caused by African swine fever virus (ASFV). It has caused significant economic losses to the swine industry and poses a serious threat to food security worldwide. Diagnostic tests with high sensitivity are essential for the effective management of ASF. Here, we describe a single-tube nested PCR (STN-PCR) assay for the detection of ASFV in which two consecutive amplification steps are carried out within a single tube. Two pairs of primers (outer and inner) were designed to target the p72 gene of ASFV. The primer concentrations, annealing temperatures, and number of amplification cycles were optimized to ensure the consecutive utilization of outer and inner primer pairs during amplification while minimizing the likelihood of amplicon contamination. In comparison with two conventional endpoint PCR assays (one of which is recommended by the World Organization for Animal Health), the newly developed STN-PCR assay demonstrated a 100-fold improvement in the limit of detection (LOD), detecting 100 copies of ASFV genomic DNA, whereas the endpoint PCR assays could detect no fewer than 10,000 copies. The clinical performance of the STN-PCR assay was validated using 95 tissue samples suspected of being positive for ASFV, and the assay showed 100% specificity. A Cohen's kappa value of 0.91 indicated perfect agreement between the assays. This new STN-PCR assay is a potentially valuable tool that will facilitate the control of ASF., (© 2024. The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.)
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- 2024
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5. Zinc oxide and selenium nanoparticles can improve semen quality and heat shock protein expression in cryopreserved goat (Capra hircus) spermatozoa.
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Abedin SN, Baruah A, Baruah KK, Bora A, Dutta DJ, Kadirvel G, Katiyar R, Doley S, Das S, Khargharia G, Sarkar B, Sinha S, Phookan A, Dewry RK, Kalita MK, Chakravarty H, and Deori S
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- Animals, Male, Semen Analysis veterinary, Semen, Antioxidants pharmacology, Heat-Shock Proteins pharmacology, Reactive Oxygen Species pharmacology, Goats, Sperm Motility, Spermatozoa, Cryopreservation veterinary, HSP70 Heat-Shock Proteins, RNA, Messenger, Zinc Oxide pharmacology, Selenium pharmacology, Semen Preservation veterinary, Nanoparticles
- Abstract
Background: Reactive oxygen species (ROS) are strongly linked with oxidative stress (OS) generated during the process of sperm cryopreservation. Indeed, cellular damage from ROS has been implicated during sperm cryopreservation which causes deterioration in sperm quality and antioxidant nanoparticles (NPs) have been successful in preventing such damage. The interaction of NPs with sperm cells has been less frequently explored in farm animals., Objective: The present study explored the effect of NP supplementation on sperm ultrastructure, potential interaction with sperm membrane (plasma and acrosome membrane), heat shock protein (HSP) gene expression levels and sperm quality in cryopreserved buck semen., Materials and Methods: Thirty-two (32) ejaculates were collected from four (4) adult male bucks and then diluted in Tris- citric acid- fructose- egg yolk (TCFY) extender containing the Zinc-oxide (ZnO) and Selenium (Se) NP treatments (T0: Control; TZn: 0.1 mg/mL ZnO NPs and TSe: 1 µg/mL Se NPs) after initial evaluation. Diluted semen was packed in 0.25 mL French mini straws and then stored in liquid nitrogen (LN
2 ). Sperm parameters, lipid peroxidation (LPO) profile, sperm head morphology ultrastructural classification under transmission electron microscope (TEM), potential interaction of NPs with sperm membrane and expression of HSP genes were evaluated in the different treatment groups., Results: We found a significant (p < 0.05) increase in the percentage of spermatozoa with intact plasma membrane, and intact acrosome in the ZnO (0.1 mg/mL) and Se (1 µg/mL) NP supplemented groups in comparison to the frozen control group. TEM assessment revealed no internalization of both ZnO and Se NPs into the sperm structure. Few occasional contacts of ZnO NPs with the sperm membrane and a few agglomerates of Se NPs around the area of damaged membranes were visualized. HSP70 and HSP90 mRNA levels were significantly (p < 0.001) higher in the NP supplemented groups in comparison to the control. HSP70 and HSP90 mRNA levels had a strong positive association with sperm motility and a weak to moderate association with other sperm parameters., Conclusions: Current findings indicated that ZnO NPs are more potent than Se NPs in ameliorating peroxidative damages during sperm cryopreservation, increases semen quality parameters possibly by increasing the expression levels of HSP genes in buck semen. Furthermore, NP supplementation may have a potential role in preserving sperm head ultrastructure by acting as an antioxidant and reducing OS during various degrees of cellular insults, which needs to be further explored., Competing Interests: Declaration of Competing Interest The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2023 Elsevier GmbH. All rights reserved.)- Published
- 2023
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6. In Vitro and In Vivo Studies on the Efficacy of Zinc-Oxide and Selenium Nanoparticle in Cryopreserved Goat (Capra hircus) Spermatozoa.
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Abedin SN, Baruah A, Baruah KK, Kadirvel G, Katiyar R, Khargharia G, Bora A, Dutta DJ, Sinha S, Tamuly S, Phookan A, and Deori S
- Subjects
- Pregnancy, Animals, Female, Male, Semen metabolism, Semen Analysis, Goats metabolism, Sperm Motility, Spermatozoa, Cryopreservation methods, Antioxidants metabolism, Zinc pharmacology, Selenium pharmacology, Zinc Oxide pharmacology, Nanoparticles
- Abstract
Different nanoparticles (NPs) are currently being investigated for their potential role as cryoprotectant during semen cryopreservation in several mammalian species. It may be possible to improve semen quality following cryopreservation by supplementation of NPs in the freezing extenders. The present study was carried out in semen collected from four (4) Assam Hill Goat bucks (10 ejaculates per buck) to investigate the effect of supplementing zinc oxide (ZnO) and selenium (Se) NPs in Tris-citric acid-fructose yolk (TCFY) extender on in vitro sperm quality and in vivo fertility rate after freeze-thawing. The size morphology and zeta potential of ZnO and Se NPs were evaluated prior to its incorporation in the freezing extender. Qualified semen samples (> 70% progressive motility) were divided into five (5) aliquots and then diluted in TCFY extender containing ZnO and Se NP supplementation at different concentrations (T
0 , control; T1 , 0.1 mg/mL ZnO NPs; T2 , 0.5 mg/mL ZnO NPs; T3 , 0.5 µg/mL Se NPs; and T4 , 1 µg/mL Se NPs). Diluted semen was packed in 0.25 mL straws and then stored in liquid nitrogen. After thawing, post-thaw in vitro sperm attributes were evaluated. Finally, the effect of NPs on in vivo fertility rate was checked in heat-synched does (n = 70) by artificial insemination (AI) using straws that showed superior results during the in vitro study. Results showed that ZnO and Se NPs were poly-crystalline in nature with particle size below 100 nm (nm). The evaluated post-thaw sperm in vitro attributes were significantly (p < 0.001) higher in T1 in comparison to T0 . The antioxidant enzyme activities were significantly (p < 0.001) higher in T1 . Lipid peroxidation (LPO) profile was significantly (p < 0.001) lower in T1 . Sperm motility and mitochondrial membrane potential (MMP) had a highly significant (r = 0.580, p < 0.05) association in T1 . No significant (p > 0.05) differences in pregnancy rates were recorded after AI in the different treatments. In conclusion, extender supplemented with 0.1 mg/mL ZnO NPs improved post-thaw semen quality of goat spermatozoa consequently by increasing activities of endogenous antioxidant enzymes thereby lowering LPO levels. However, improved in vitro outcomes might not correspond to improved field fertility outcomes., (© 2023. The Author(s), under exclusive licence to Springer Science+Business Media, LLC, part of Springer Nature.)- Published
- 2023
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7. Development of a novel visual isothermal amplification assay for rapid detection of Brucella spp.
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Milton AAP, Momin KM, Srinivas K, Priya GB, Ghatak S, Das S, Shakuntala I, Sen A, and Baruah KK
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- Animals, Humans, Sensitivity and Specificity, Polymerase Chain Reaction methods, Nucleic Acid Amplification Techniques methods, Brucella genetics, Brucellosis diagnosis, Brucellosis veterinary
- Abstract
Brucellosis is an economically important livestock disease worldwide besides having a noteworthy impact on human health. In this study, a rapid, simple, and ultra-sensitive nuclei-acid diagnostic technique was developed for the detection of brucellosis harnessing saltatory rolling circle amplification (SRCA). The diagnostic method was developed using World Organization for Animal Health (WOAH) approved primers targeting the bcsp31 gene of the Brucella genome. The assay can be accomplished within 90 min at a temperature of 65 °C without the requirement of sophisticated instrumentation. The result interpretation can be done with the naked eye with the aid of SYBR green dye. The developed technique displayed 100% specificity by amplifying only 10 reference and field strains of Brucella spp. and there was no cross-reactivity with the other tested pathogens. The lower limit of detections of SRCA and end-point PCR assays were 9.7 fg/μL (2.7 genome copies of Brucella) and 970 fg/μL, respectively. Thus, the developed SRCA assay was found to be 100× more sensitive than the end-point PCR assay. To the best of our knowledge, our study is the first one to develop an SRCA-based assay for the detection of brucellosis and it can be a diagnostic tool for resource-constrained laboratories and veterinary hospitals., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2023 Elsevier B.V. All rights reserved.)
- Published
- 2023
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8. Effects of integrated nutrient management on sucrose phosphate synthase enzyme activity and grain quality traits in rice.
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Bharali A and Baruah KK
- Abstract
Cropping systems and management practices can greatly affect rice crop, finally determining their grain yield and quality. In this study, we evaluated the effects of integrated nutrient management practices on sucrose phosphate synthase enzyme (SPS) activity and grain quality traits of rice. Field experiments were conducted at North Bank Plain Agro-climatic Zone of Assam, India from 2013 to 2015 on three rice ecosystems (winter, summer, and pre-monsoon). Selected fertilizer treatments were NPK as recommended inorganic fertilizer, NPK + cow dung, NPK + whole parts of the green manure Sesbania aculeata , NPK + compost of Azolla caroliniana and NPK + rice husk dust. NPK + Azolla compost application resulted in higher SPS activity compared to control. A significant relationship between panicle biomass and SPS enzyme activity was observed in the rice plants grown in different ecosystems. Integrated nutrient fertilizers in rice soil had a significant impact on the grain quality of rice. Grain nitrogen and crude protein content were higher at NPK + green manure Sesbania aculeata applied field irrespective of the ecosystems. NPK and Azolla compost were effective in improving grain productivity and grain quality parameters viz; total carbohydrates, starch, and amylose in rice crop., Supplementary Information: The online version contains supplementary material available at 10.1007/s12298-022-01148-w., Competing Interests: Conflict of interestThe authors declare no conflict of interest., (© Prof. H.S. Srivastava Foundation for Science and Society 2022.)
- Published
- 2022
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9. Greenhouse gas emission from rice fields: a review from Indian context.
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Gupta K, Kumar R, Baruah KK, Hazarika S, Karmakar S, and Bordoloi N
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- Agriculture, Carbon Dioxide analysis, India, Methane analysis, Nitrous Oxide analysis, Soil, Greenhouse Gases, Oryza
- Abstract
Agricultural soil acts as a source and sink of important greenhouse gases (GHGs) like methane (CH
4 ), nitrous oxide (N2 O), and carbon dioxide (CO2 ). Rice paddies have been a major concern to scientific community, because they produce the threatening and long-lasting GHGs mainly CH4 and N2 O. Around 30% and 11% of global agricultural CH4 and N2 O, respectively, emitted from rice fields. Thus, it is urgent to concurrently quantify the fluxes of CH4 and N2 O to improve understanding of both the gases from rice fields and to develop mitigation strategies for upcoming climate change reduction. An effort is being made in this review to discuss exclusively the emission of CH4 and N2 O under normal and controlled conditions in different locations of India and also addresses the current synthesis of available data on how field and crop management activities influence CH4 and N2 O emissions in rice fields. Making changes to conventional crop management regimes could have a significant impact on reducing GHG emissions from rice field. Environmental and agricultural factors related to soil could be easily altered by management practices. So, knowing the mechanism of CH4 and N2 O production and release in the rice field and factors controlling the emissions is fundamental to develop well-organized strategies to reduce emissions from rice cultivated soil. This will help the regulatory bodies or policy makers to formulate adequate policies for agricultural farmers to refine the GHG emissions as well as minimize the global climate change.- Published
- 2021
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10. Productive and reproductive performances of two-breed and three-breed pig crosses with Niang Megha, Hampshire and Duroc inheritance reared under subtropical Eastern Himalayan hilly climate.
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Kadirvel G, Devi YS, Singh LA, Singh NM, Baruah KK, and Kandpal BK
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- Altitude, Animals, Female, Hybridization, Genetic, India, Male, Sus scrofa genetics, Tropical Climate, Animal Husbandry, Reproduction, Sus scrofa physiology
- Abstract
The objective of the study was to evaluate the performance of different crossbreeds, viz., two-breed crosses including HN-50 (50% Hampshire × 50% Niang Megha) and HN-75 (75% Hampshire × 25% Niang Megha) and three-breed cross, HND (25% Hampshire × 25% Niang Megha × 50% Duroc) for suggesting suitable crossbred pigs with appropriate inheritance for subtropical Eastern Himalayan hilly climate. These crossbreed pigs were reared in standard management conditions in Nucleus Pig Breeding Farm of ICAR RC for NEH region. A total of 1995 records were collected which included data on production performance (n = 1466), reproductive performance (n = 428) and carcass traits (n = 101) from farm record book maintained over a period of 7 years. Productive performance included body weight, ADG and FCR at different stages of growth. The study revealed productive performance was highest in two-breed cross of pigs with 75% H inheritance (HN-75) and three-breed cross (HND) pigs. Reproductive performance included ages at puberty, first conception and first farrowing, along with inter-farrowing interval, pregnancy and farrowing rate as well as litter performance. The HN-75 was found to be having shorter inter-farrowing interval and higher pregnancy rate than other genetic groups. Regarding carcass traits, three-breed cross had a higher dressing percentage and less back-fat thickness than other crossbred pigs. Two breed crosses of pigs were found to be having a higher back-fat thickness than three-breed cross pig, and HN-75 had a better dressing percentage than HN-50. Thus, it was concluded that three-breed cross was recommended for lean meat production, and two-breed cross HN-75 was recommended for both breeding and fattening purposes for subtropical Eastern Himalayan hilly climate.
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- 2021
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11. Slow release exogenous melatonin modulates scrotal circumference and testicular parameters, libido, endocrinological profiles and antioxidant and oxidative stress profiles in mithun.
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Perumal P, Chang S, De AK, Baruah KK, Khate K, Vupru K, and Mitra A
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- Animals, Antioxidants, Cattle, India, Libido, Male, Oxidative Stress, Seasons, Testis, Testosterone, Melatonin pharmacology
- Abstract
Mithun (Bos frontalis) is a unique domestic free-range bovine species available in North Eastern hilly (NEH) regions of India and is reared for its protein rich meat. Although, mithun suffers from severe non-cyclical population fluctuations, it is not yet declared as endangered. Therefore, present study was conducted to assess the effect of slow release subcutaneous exogenous melatonin (MT) implant on sexual behaviour, scrotal circumference (SC) and testicular parameters, endocrinological profiles and antioxidant and oxidative stress profiles in mithun during different seasons (winter, spring, summer and autumn) to improve its reproductive efficiency. Experimental mithun bulls (5-6 years of age) were selected and divided randomly into two groups, Gr I: Control (n = 6) and Gr II: Treatment (n = 6; melatonin implant @ 18mg/50 kg B. Wt). Scrotal circumference and testicular parameters [total testicular volume and weight], endocrinological profiles [follicle stimulating hormone (FSH), luteinizing hormone/interstitial cell stimulating hormone (LH/ICSH), testosterone, thyroxine (T4), cortisol, prolactin and melatonin (MT)], sex behaviour profiles [libido score, mating ability score and sexual behaviour score], antioxidant profiles [total antioxidant capacity (TAC), catalase (CAT), glutathione (GSH), glutathione reductase (GSHRx) and superoxide dismutase (SOD)] and oxidative stress profile [malondialdehyde (MDA)] were estimated. Statistical analysis revealed that these experimental profiles differed between treatment and control groups within the seasons and among the seasons within the experimental groups. FSH, LH, testosterone, T4 and MT were higher and cortisol and prolactin were lower in spring and winter than in summer season. Concentration of FSH, LH, testosterone and MT were higher and concentration of T4, cortisol and prolactin were lower in MT treated than in untreated control group. Similarly, sexual behavioural scores, SC, testicular parameters and antioxidant profiles were higher and oxidative stress profile was lower in MT treated than in untreated control group and in winter and spring than in summer season. The study concluded that exogenous slow-release melatonin implantation and spring and winter seasons had significant beneficial effects in improvement of the antioxidant profiles, minimization of oxidative stress with cascading beneficial effects on endocrinological profiles, SC, testicular parameters and libido, which will improve the semen production, higher sperm cryo-survivability and fertility rate in mithun species., Competing Interests: Declaration of competing interest Authors declare that there is no conflict of interest involved in the present work., (Copyright © 2020 Elsevier Inc. All rights reserved.)
- Published
- 2020
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12. Fertilizer management through coated urea to mitigate greenhouse gas (N 2 O) emission and improve soil quality in agroclimatic zone of Northeast India.
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Bordoloi N, Baruah KK, and Hazarika B
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- Agriculture, Carbon, Fertilizers, India, Nitrogen analysis, Nitrous Oxide analysis, Soil, Urea, Greenhouse Gases, Oryza
- Abstract
Agricultural soils are an important source of greenhouse gas nitrous oxide (N
2 O) emission. The comprehensive effects of nitrogen fertilizer management on N2 O emission from paddy fields of India have not been evaluated under field conditions. A 2-year field study was conducted to evaluate the effect of different nitrogen fertilizers, namely, conventional fertilizer (NPK), starch-coated urea (SCU), neem-coated urea (NCU), and normal urea alone (NUA) on soil quality, grain yield, and N2 O emission from rice field. Gas samples were collected from the field at weekly intervals by static chamber technique and analyzed in a gas chromatograph. During the crop-growing season, the application of NPK resulted in the highest cumulative N2 O emission (2.49 kg N2 O-N ha-1 ) followed by NUA (2.34 kg N2 O-N ha-1 ), NCU (2.20 kg N2 O-N ha-1 ), and SCU (1.97 kg N2 O-N ha-1 ). As against the application of conventional fertilizer (NPK), the application of SCU and NCU reduced the total N2 O emission by 21% and 12%, respectively (p < 0.05), during the rice-growing period. The results indicate a good correlation of N2 O emissions with soil organic carbon, soil mineral nitrogen, and urease activity (p < 0.05) at different stages of crop growth. Application of SCU significantly increased the rice grain productivity by 12%, 10%, and 3% over NPK (control), NCU, and NUA respectively without affecting the soil quality and nutrient status. The use of SCU improved the nitrogen use efficiency (NUE) and was the effective substitute for conventional fertilizer in terms of reducing N2 O emissions from tropical rice paddy.- Published
- 2020
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13. Estimation of methane and nitrous oxide emission from wetland rice paddies with reference to global warming potential.
- Author
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Gorh D and Baruah KK
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- Agriculture methods, Global Warming, India, Plant Stomata physiology, Plant Transpiration, Greenhouse Gases analysis, Methane analysis, Nitrous Oxide analysis, Oryza physiology, Wetlands
- Abstract
Methane (CH
4 ) and nitrous oxide (N2 O) are two important greenhouse gases (GHG) and contribute largely to global warming and climate change. The impact of physiological characteristics of rice genotypes on global warming potential (GWP) and greenhouse gas intensity (GHGI) is not well documented. A 2-year field experiment was conducted with eight summer rice varieties: Dinanath, Joymoti, Kanaklata, Swarnabh, IR 64, Tapaswami (modern varieties), Number 9, and Jagilee Boro (indigenous varieties) for two successive seasons (December-June, 2015-2016 and December-June, 2016-2017) to estimate their GWP and GHGI. The GWP of the rice varieties ranged from 841.52 to 1288.67 kg CO2 -equiv. ha-1 and GHGI from 0.184 to 0.854 kg CO2 -equiv. kg-1 grain yield. Significant differences (p < 0.05) in seasonal GHG emission, GWP, GHGI, CEE (carbon equivalent emission), photosynthetic efficiency, stomatal conductance, transpiration rate, and grain productivity among the rice varieties were observed during the investigation. A good correlation of GWP (p < 0.01) was recorded with rate of stomatal conductance and transpiration rate of the varieties. The present study reveals a strong relationship between plant biomass (p < 0.01) with GWP and CEE of the rice varieties. The variety IR 64 and Number 9 are identified as the most suitable variety with lowest GWP (909.85 and 876.68 kg CO2 -equiv. ha-1 respectively) and GHGI (0.192 and 0.227 kg CO2 -equiv. kg-1 grain yield respectively) accompanied by higher grain productivity (4839 and 3867 kg ha-1 respectively). Observations from the study suggest that agricultural productivity and GHG mitigation can be simultaneously achieved by proper selection of rice genotypes.- Published
- 2019
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14. Administration of slow release exogenous melatonin modulates oxidative stress profiles and in vitro fertilizing ability of the cryopreserved mithun (Bos frontalis) spermatozoa.
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Perumal P, Chang S, Baruah KK, and Srivastava N
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- Animals, Antioxidants metabolism, Cryopreservation veterinary, Fertilization in Vitro methods, Male, Melatonin administration & dosage, Semen Analysis veterinary, Spermatozoa metabolism, Fertilization in Vitro veterinary, Melatonin pharmacology, Oxidative Stress drug effects, Ruminants, Spermatozoa drug effects
- Abstract
Mithun (Bos frontalis) is a unique domestic free range bovine species of North Eastern hilly regions of India. The present study was designed to assess the seasonal effect of slow release exogenous melatonin (MT) implant on semen quality parameters (SQP) and in vitro zona binding ability (IVZ) of spermatozoa. The experimental animals were divided into Gr I: Control (n = 5) and Gr II: Treatment (n = 5; melatonin implant @ 18mg/50 kg bwt). A total of 20 semen samples/group in winter, spring, autumn and summer seasons (n = 160), twice per week were collected. Following cryopreservation, samples were evaluated for motility parameters (forward progressive, mobility & velocity by computer assisted sperm analyser (CASA), viability, acrosome integrity, plasma membrane and nuclear abnormality, functional status of mitochondria, enzymatic, antioxidant and oxidative profiles, and IVZ. The study revealed significant (p < 0.05) improvement in total motility, viability, acrosome-, plasma membrane-, and nuclear-integrity, and antioxidant profiles; with highest values in spring and lowest in summer season in the fresh semen in Gr II than the Control. A significant (p < 0.05) improvement in motility parameters, membrane potential of mitochondria, antioxidant profiles and reduction in sperm and nuclear abnormalities, leakage of intracellular enzymes and oxidative stress and IVZ index & binding percentage in post-thaw semen samples in melatonin supplemented than in un-supplemented control group was observed. It can be concluded from the study that slow-release melatonin supplementation can be effectively utilized to improve the antioxidant profiles and reduction of oxidative stress, with cascading beneficial effects on semen quality parameters and fertility status of the mithun bull., (Copyright © 2018 Elsevier Inc. All rights reserved.)
- Published
- 2018
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15. Impacts of integrated nutrient management on methane emission, global warming potential and carbon storage capacity in rice grown in a northeast India soil.
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Bharali A, Baruah KK, Baruah SG, and Bhattacharyya P
- Subjects
- Agriculture, Carbon Dioxide, Food, India, Manure, Nitrous Oxide analysis, Soil, Carbon metabolism, Fertilizers, Global Warming, Methane metabolism, Oryza metabolism
- Abstract
Rice soil is a source of emission of two major greenhouse gases (methane (CH
4 ) and nitrous oxide (N2 O)) and a sink of carbon dioxide (CO2 ). The effect of inorganic fertilizers in combination with various organics (cow dung, green manure (Sesbania aculeata) Azolla compost, rice husk) on CH4 emission, global warming potential, and soil carbon storage along with crop productivity were studied at university farm under field conditions. The experiment was conducted in a randomized block design for 2 years in a monsoon rice (cv. Ranjit) ecosystem (June-November, 2014 and 2015). Combined application of inorganic (NPK) with Sesbania aculeata resulted in high global warming potential (GWP) of 887.4 kg CO2 ha-1 and low GWP of 540.6 kg CO2 ha-1 was recorded from inorganic fertilizer applied field. Irrespective of the type of organic amendments, flag leaf photosynthesis of the rice crop increased over NPK application (control). There was an increase in CH4 emission from the organic amended fields compared to NPK alone. The combined application of NPK and Azolla compost was effective in the buildup of soil carbon (16.93 g kg-1 ) and capacity of soil carbon storage (28.1 Mg C ha-1 ) with high carbon efficiency ratio (16.9). Azolla compost application along with NPK recorded 15.66% higher CH4 emission with 27.43% yield increment over control. Azolla compost application significantly enhanced carbon storage of soil and improved the yielding ability of grain (6.55 Mg ha-1 ) over other treatments.- Published
- 2018
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16. Genotypic variation in carbon fixation, δ 13 C fractionation and grain yield in seven wheat cultivars grown under well-watered conditions.
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Baruah KK, Bharali A, Mazumdar A, and Jha G
- Abstract
Biotic carbon (C) sequestration is currently being considered as a viable option for mitigating atmospheric carbon dioxide (CO2) emission, in which photosynthesis plays a significant role. A field experiment was conducted between 2013 and 2015 to investigate the efficiency of seven modern wheat varieties for CO2 fixation, C partitioning, δ13C fractionation in the leaves, and grain yield. A strong correlation between flag leaf photosynthesis and stomatal density (r=0.891) was detected. Photosynthetic efficiency was highest in the variety WH-1021 (28.93µmolm-2s-1). Grain yield was influenced by biomass accumulation in the heads and these were significantly correlated (r=0.530). Our results show that upregulated biomass partitioning to the developing kernels of wheat was inversely proportional to biomass accumulation in the roots, and led to a higher grain yield. These results led us to conclude that identification of a wheat genotype like WH-1021 followed by WH-1080 and WH-711, with higher isotopic discrimination in the flag leaves, stomatal densities, water use and photosynthetic efficiencies along with higher grain yield, can contribute to sustainable agriculture in future climate change situation in India. A yield increment of 9-48% was recorded in WH-1021 over other six tested wheat varieties.
- Published
- 2017
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17. Effect of foliar application of plant growth regulators on nitrous oxide (N 2 O) emission and grain yield in wheat.
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Bordoloi N and Baruah KK
- Subjects
- Edible Grain chemistry, Plant Growth Regulators, Soil, Nitrous Oxide, Triticum
- Abstract
Agricultural soils are the major source of global nitrous oxide (N
2 O) emission, and more than two thirds of N2 O emission originate from soil. Recent studies have identified that green plants contribute to transport of N2 O to the atmosphere. We investigated the effects of foliar application of plant growth regulators (PGRs) and growth stimulating chemicals on N2 O emission and wheat grain yield for 2 years. The PGRs' abscisic acid (ABA) and cytozyme (20 mg L-1 ), kinetin (10 and 20 mg L-1 ) and wet tea extract (1:20 w/w) along with distilled water as control were sprayed on wheat canopy at the tillering and panicle initiation stages. Our results showed that cytozyme and tea extract enhanced the plant dry biomass over control. Kinetin (10 and 20 mg L-1 ) and cytozyme increased the plant photosynthetic rate and photosynthate partitioning towards the developing grain. ABA (20 mg L-1 ) and kinetin (10 and 20 mg L-1 ) reduced the N2 O emission over control primarily through regulation of leaf growth, stomatal density and xylem vessel size. Leaf area, stomatal density and xylem vessel size were found to be associated with N2 O transport and emission. We concluded that use of ABA and kinetin can reduce N2 O emissions without any impact on wheat grain yield.- Published
- 2017
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18. Nitrous oxide emission and mitigation from wheat agriculture: association of physiological and anatomical characteristics of wheat genotypes.
- Author
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Borah L and Baruah KK
- Subjects
- Biodegradation, Environmental, Edible Grain chemistry, Genotype, Plant Leaves chemistry, Triticum anatomy & histology, Triticum genetics, Crops, Agricultural metabolism, Nitrous Oxide metabolism, Triticum metabolism
- Abstract
Agriculture is an important source of emission of the greenhouse gas nitrous oxide (N2O). The observed differences in N2O emission among different varieties of agricultural crops can be a key factor for developing N2O emission reduction strategies. N2O emissions were estimated from three varieties of wheat viz. Sonalika, DBW 39, and K 0307 during 2010-2011 in an attempt to identify plant physiological and anatomical factors contributing to differences in gas emissions within the varieties. Sonalika was identified as a low N2O emitting variety and DBW 39 as high emitting when grown in a uniform field condition. The experiment was repeated in 2011-2012 selecting low emitting Sonalika and high emitting variety DBW 39 for further confirmation of the results obtained during the first year of experimentation. Important plant factors namely rate of photosynthesis and transpiration in flag leaf, stomatal frequency of adaxial flag leaf surface, and size of the xylem vessels (mean vessel size of node, stem, and root) were studied, and their relationship with N2O flux was worked out. A good correlation between transpiration and N2O flux was observed in this study. Scanning electron microscopic investigation revealed strong association of flag leaf stomatal frequency and xylem size with N2O emission. Sonalika, identified as low N2O emitting variety during both the years of study, also recorded higher grain yield due to its higher efficiency of photosynthate allocation toward the developing grains. The observed differences in N2O emission are considered to be due largely to genetic differences in the wheat genotypes.
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- 2016
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19. Development and Validation of a Sensitive Enzymeimmunoassay for Determination of Plasma Metastin in Mithun (Bos frontalis).
- Author
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Mondal M, Karunakaran M, and Baruah KK
- Subjects
- Animals, Cattle, Enzyme-Linked Immunosorbent Assay methods, Enzyme-Linked Immunosorbent Assay standards, Female, Kisspeptins blood, Pregnancy blood
- Abstract
Metastin, also known as kisspeptin-10, is a potent stimulator of gonadotropin-releasing hormone (GnRH) neurons in the central nervous system. Recently, it has been emerged as a key player in the regulation of reproduction in mammals. Blood concentrations of metastin during different physiological stages in bovine species in general and mithun (Bos frontalis) in particular are not available. Lacking of such information may probably be due to non-availability of simple assay procedure to measure the peptide. Therefore, the objective of this study was to develop and validate a simple and sufficiently sensitive enzyme immunoassay (EIA) for metastin determination in mithun plasma using the biotin-streptavidin amplification system and second antibody coating technique. Biotin was coupled to metastin and used to bridge between streptavidin-peroxidase and the immobilized metastin antiserum in the competitive assay. The EIA was conducted directly in 150 μ L of unknown mithun plasma. Metastin standards ranging from 0.01-51.2 ng/150 μ L/well were prepared in hormone-free plasma. The lowest detection limit was 0.07 ng/mL plasma. Plasma volumes for the EIA, viz., 75, 150, and 200 μ L did not influence the shape of standard curve even though a drop in OD450 was seen with higher plasma volumes. A parallelism test was carried out to compare the endogenous mithun metastin with metastin standard used. It showed good parallelism with the metastin standard curve. For the biological validation of the assay, metastin was measured in (a) blood samples collected from 12 pregnant mithun cows during different stages of pregnancy, (b) in blood from seven early pregnant and 12 non-pregnant mithuns, and (c) in follicular fluid obtained from different types of follicle. It was found that the plasma metastin concentrations increased (P < 0.001) from first through last trimester of pregnancy. Plasma metastin levels were much higher (P < 0.001) in early pregnant than non-pregnant cows. Follicular fluid metastin concentrations were found to increase (P < 0.001) as the follicles grow and the highest levels were recorded in preovulatory follicles. In conclusion, a simple, sufficiently sensitive and direct EIA procedure has been developed for the first time to determine metastin levels in mithun. A wide range of metastin concentrations can be detected during different physiological stages in mithun using this metastin-EIA procedure.
- Published
- 2016
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20. Development and Application of a Sensitive, Second Antibody Format Enzymeimmunoassay (EIA) for Estimation of Plasma FSH in Mithun (Bos frontalis).
- Author
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Mondal M, Baruah KK, and Prakash BS
- Subjects
- Animals, Animals, Wild, Biotin chemistry, Cattle, Estrous Cycle drug effects, Female, Goats, Gonadotropin-Releasing Hormone pharmacology, Immune Sera chemistry, Immunoconjugates chemistry, Peroxidase chemistry, Rabbits, Reproducibility of Results, Sensitivity and Specificity, Streptavidin chemistry, Antibodies chemistry, Estrous Cycle physiology, Follicle Stimulating Hormone blood, Immunoenzyme Techniques standards
- Abstract
Mithun (Bos frontalis) is a semi-wild rare ruminant species. A simple sensitive enzymeimmunoassay suitable for assaying FSH in the blood plasma of mithun is not available which thereby limits our ability to understand this species reproductive processes. Therefore, the aim of this article was to develop a simple and sensitive enzymeimmunoassay (EIA) for estimation of FSH in mithun plasma and apply the assay to understand the estrous cycle and superovulatory process in this species. To accomplish this goal, biotinylated FSH was bridged between streptavidin-peroxidase and immobilized antiserum in a competitive assay. Forty microlitre mithun plasma was used directly in the EIA. The FSH standards were prepared in hormone free plasma and ranged from 5-1280 pg/well/40 μL. The sensitivity of EIA was 5 pg/well FSH, which corresponds to 0.125 ng/mL plasma and the 50% relative binding sensitivity was 90 pg/well/40 μL. Although the shape of the standard curve was not influenced by different plasma volumes viz. 40 and 80 μL, a slight drop in the OD450 was observed with the increasing volume of plasma. Parallelism tests conducted between the endogenous mithun FSH and bovine FSH standards showed good homology between them. Plasma FSH estimated using the developed EIA and commercially available FSH EIA kit in the same samples were correlated (r = 0.98) and showed linearity. Both the Intra- and inter-assay CV were below 6%. Recovery of known concentrations of added FSH showed linearity (r = 0.99). The developed EIA was further validated biologically by estimating FSH in cyclic cows for the entire estrous cycle, in mithun heifers administered with GnRH analogues and in mithun cows during superovulatory treatment with FSH. In conclusion, the EIA developed for FSH determination in mithun blood plasma is simple and highly sensitive for estimation of mithun FSH in all physiological conditions.
- Published
- 2016
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21. Determination of plasma kisspeptin concentrations during reproductive cycle and different phases of pregnancy in crossbred cows using bovine specific enzyme immunoassay.
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Mondal M, Baruah KK, and Prakash BS
- Subjects
- Animals, Breeding, Cattle, Female, Immune Sera immunology, Lactation, Pregnancy, Reproducibility of Results, Estrous Cycle physiology, Immunoenzyme Techniques methods, Kisspeptins blood, Reproduction physiology
- Abstract
Kisspeptin, a decapeptide and potent secretagogue of GnRH has been emerged recently as a master player in the regulation of reproduction in animals. Determination of kisspeptin in peripheral circulation is, therefore, very important for studying the control of its secretion and its role on reproduction in bovine species, the information on which is not available during any physiological state in this species, may probably be due to non-availability of simple assay procedure to measure the hormone. Therefore, the objective of this study was to develop and validate a simple and sufficiently sensitive enzyme immunoassay (EIA) for kisspeptin determination in bovine plasma using the biotin-streptavidin amplification system and second antibody coating technique. Biotin was coupled to kisspeptin and used to bridge between streptavidin-peroxidase and the immobilized kisspeptin antiserum in the competitive assay. The EIA was conducted directly in 100 μl of unknown bovine plasma. Kisspeptin standards ranging from 0.01 to 25.6 ng/100 μl/well were prepared in hormone-free plasma. The lowest detection limit was 0.1 ng/ml plasma. Plasma volumes for the EIA, viz., 50, 100 and 200 μl did not influence the shape of standard curve even though a drop in OD450 was seen with higher plasma volumes. A parallelism test was carried out to compare the endogenous bovine kisspeptin with kisspeptin standard used. It showed good parallelism with the kisspeptin standard curve. For the biological validation of the assay, plasma kisspeptin was measured in blood samples collected from six non-lactating cyclic cows during entire estrous cycle and from 18 pregnant cows during different stages of pregnancy. The mean plasma kisspeptin concentration during different days of the estrous cycle was different (P<0.001). Three peaks of kisspeptin were recorded, one on a day before appearance of preovulatory LH surge, second at day 6 and third one at day 18 of the estrous cycle. Plasma kisspeptin concentrations increased (P<0.001) from first through last trimester of pregnancy. Kisspeptin concentrations were also measured in different follicular, luteal and placental tissues. Follicular and placental kisspeptin levels increased (P<0.01) during follicular development and with the advancement of pregnancy, respectively. On the other hand, luteal concentrations of kisspeptin decreased (P<0.01) with its developmental process. In conclusion, a simple, sufficiently sensitive and direct EIA procedure has been developed for the first time to determine plasma kisspeptin levels in bovine. A wide range of kisspeptin concentrations can be detected during different physiological stages in bovine using this kisspeptin-EIA procedure., (Copyright © 2015 Elsevier Inc. All rights reserved.)
- Published
- 2015
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22. Response of leaf water status, stomatal characteristics, photosynthesis and yield in black gram and green gram genotypes to soil water deficit.
- Author
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Baroowa B, Gogoi N, Paul S, and Baruah KK
- Abstract
Drought is one of the most important abiotic stresses constraining crop productivity worldwide. The objective of the present study was to investigate the differences in drought tolerance at leaf and stomatal level of black gram (genotypes: T9, KU 301, PU 19, USJD 113) and green gram (genotypes: Pratap, SG 21-5, SGC 16, TMB 37). Drought was applied for fifteen consecutive days at flowering stage (35 days after sowing). Mid-day leaf water potential (ΨL), leaf area, photosynthesis rate (PN), leaf chlorophyll, stomatal conductance (gs) and seed yield of drought- treated plants were calculated relative to those of well watered plants. Stomatal characteristics were observed in terms of stomatal frequency (SF) and stomatal aperture size (SA). Among the studied genotypes, T9 (black gram) and Pratap (green gram) proved their better tolerance capacity to drought by maintaining higher leaf area, ΨL, PN, leaf chlorophyll, gs and SA which contributed to better seed yield. Between the two crops, green gram appeared to be affected to a greater extent, as it experienced higher reduction in yield than black gram. A highly significant positive correlation (level 0.01) of seed yield was obtained with leaf area, ΨL, PN, leaf chlorophyll, gs and SA, whereas SF was found to be poorly correlated with seed yield.
- Published
- 2015
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23. Effect of concentration and addition method of glycerol on the quality of cryopreserved mithun (Bos frontalis) spermatozoa.
- Author
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Baruah KK, Dhali A, Mech A, Bora B, Das J, Bora R, Mondal M, Sarmah BC, Deka BC, and Rajkhowa C
- Subjects
- Animals, Male, Semen drug effects, Semen physiology, Spermatozoa physiology, Cattle physiology, Cryopreservation veterinary, Cryoprotective Agents pharmacology, Glycerol pharmacology, Semen Analysis veterinary, Spermatozoa drug effects
- Abstract
The effect of concentration and addition method of glycerol on the quality of cryopreserved mithun (Bos frontalis) spermatozoa was investigated. Semen samples were collected from five healthy mithun bulls through rectal massage method and cryopreserved in liquid nitrogen. The samples were diluted in Tris-egg yolk-glycerol extender, equilibrated for 4 h at 4 °C and loaded into 0.50-ml straws. The straws were then frozen in liquid nitrogen vapour for 10 min and finally plunged into liquid nitrogen for storage. The required amount of glycerol was added into the diluted samples either in a single dose (3%, 4%, 5%, 6% or 7%; added at 37 °C immediately before equilibration) or in split doses (5%, 6% or 7%; the total amount was divided into four equal parts, and a part was added at 37 °C immediately before equilibration, and the remaining parts were added subsequently at 1, 2 and 3 h of equilibration at 4 °C). In the single-dose addition method, following freeze-thawing, greater (p < 0.05) motility (%) and proportion of live spermatozoa with intact acrosome (LSIA, %) in 5% glycerol (40.6 ± 1.7 and 43.4 ± 1.8 respectively) and lesser (p < 0.05) total morphological abnormalities (%) in 5% (14.1 ± 0.8) and 6% (13.7 ± 1.0) glycerol were observed compared to the other glycerol concentrations. In the split-dose addition method, following freeze-thawing, greater (p < 0.05) motility (%) and LSIA proportion (%) were found in 5% (50.2 ± 1.9 and 53.3 ± 1.8 respectively) compared to 6% or 7% glycerol, but the total morphological abnormalities were not different among the glycerol concentrations. In addition, in all the glycerol concentrations, better (p < 0.05) post-freeze-thaw motility and LSIA proportions were observed when glycerol was added in split doses compared to a single dose. In conclusion, Tris-egg yolk extender with 5% glycerol added in split doses was found most suitable for cryopreserving mithun sperm., (© 2012 Blackwell Verlag GmbH.)
- Published
- 2013
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24. Potential antibacterial activity of berberine against multi drug resistant enterovirulent Escherichia coli isolated from yaks (Poephagus grunniens) with haemorrhagic diarrhoea.
- Author
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Bandyopadhyay S, Patra PH, Mahanti A, Mondal DK, Dandapat P, Bandyopadhyay S, Samanta I, Lodh C, Bera AK, Bhattacharyya D, Sarkar M, and Baruah KK
- Subjects
- Animals, Berberine metabolism, Cattle, DNA, Bacterial metabolism, Diarrhea veterinary, Drug Resistance, Multiple, Bacterial, Enteropathogenic Escherichia coli, Enterotoxigenic Escherichia coli, Escherichia coli Infections veterinary, Microbial Sensitivity Tests, Protein Binding, Shiga-Toxigenic Escherichia coli, Anti-Bacterial Agents therapeutic use, Berberine therapeutic use, Cattle Diseases drug therapy, Diarrhea drug therapy, Escherichia coli Infections drug therapy
- Abstract
Objective: To evaluate the antimicrobial efficacy of berberine, a plant alkaloid., Methods: Five multi-drug resistant (MDR) STEC/EPEC and five MDR ETEC isolates from yaks with haemorrhagic diarrhoea were selected for the study. Antibacterial activity of berberine was evaluated by broth dilution and disc diffusion methods. The binding kinetics of berberine to DNA and protein was also enumerated., Results: For both categories of enterovirulent Escherichia coli (E. coli) isolates, berberine displayed the antibacterial effect in a dose dependent manner. The MIC(50) of berberine chloride for STEC/EPEC isolates varied from 2.07 μM to 3.6 μM with a mean of (2.95 ± 0.33) μM where as for ETEC strains it varied from 1.75 to 1.96 μM with a mean of (1.87 ± 0.03) μM. Berberine bind more tightly with double helix DNA with Bmax and Kd of (24.68±2.62) and (357.8±57.8), respectively. Berberine reacted with protein in comparatively loose manner with Bmax and Kd of (18.9±3.83) and (286.2±113.6), respectively., Conclusions: The results indicate clearly that berberine may serve as a good antibacterial against multi drug resistant E. coli., (Copyright © 2013 Hainan Medical College. Published by Elsevier B.V. All rights reserved.)
- Published
- 2013
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25. Characterization of shiga toxin producing (STEC) and enteropathogenic Escherichia coli (EPEC) in raw yak (Poephagus grunniens) milk and milk products.
- Author
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Bandyopadhyay S, Lodh C, Rahaman H, Bhattacharya D, Bera AK, Ahmed FA, Mahanti A, Samanta I, Mondal DK, Bandyopadhyay S, Sarkar S, Dutta TK, Maity S, Paul V, Ghosh MK, Sarkar M, and Baruah KK
- Subjects
- Animals, Cattle, Escherichia coli Proteins genetics, Escherichia coli Proteins metabolism, Female, Odds Ratio, Cheese microbiology, Enteropathogenic Escherichia coli isolation & purification, Food Microbiology, Milk microbiology, Shiga-Toxigenic Escherichia coli isolation & purification
- Abstract
Thirty-one shiga toxin-producing (STEC) and 6 enteropathogenic Escherichia coli (EPEC) were isolated from 87 raw yak milk and 63 'churpi' samples. Of 18 stx(1) positive isolates (48.6%), 14 carried stx(1c) (77.7%). Subtyping of 28 stx(2) positive isolates (75.7%) revealed the presence of stx(2c) (9, 32.1%), stx(2d) (3, 10.7%), stx(2e) (1, 3.57%) and stx(2f) (3, 10.7%) variants. Furthermore, intimin (eaeA), enterohaemolysin (ehxA), autoagglutinating adhesin (saa), iha (adherence conferring protein), efa1 (EHEC factor for adherence), bundle forming pilli (bfpA) and toxB (type III secreted protein encoded on LEE Island, similar to toxin B of Clostridium difficile) genes were detected in 14, 16, 12, 4, 3, 2 and 2 isolates, respectively. Univariate and multivariate analysis depicted that both stx(1) and stx(2) or their variants were more likely to occur in isolates from Arunachal Pradesh (p<0.04) rather than Sikkim. Dendogram constructed on the basis of RAPD and ERIC PCR profile distributed the STEC and EPEC isolates in separate clusters irrespective of their sources and serotypes. The STEC and EPEC isolates exhibited resistance against erythromycin, amikacin, azithromycin, amoxicillin, ampicillin+cloxacillin, cephalothin, furazolidone, gentamicin, kanamycin, streptomycin and tetracycline. This is the first ever report on occurrence and characterization of STEC and EPEC isolated from yak milk and milk products., (Copyright © 2012. Published by Elsevier India Pvt Ltd.)
- Published
- 2012
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26. Plant morphophysiological and anatomical factors associated with nitrous oxide flux from wheat (Triticum aestivum).
- Author
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Baruah KK, Gogoi B, Borah L, Gogoi M, and Boruah R
- Subjects
- Genetic Variation, Genotype, India, Nitrous Oxide analysis, Plant Leaves anatomy & histology, Plant Leaves ultrastructure, Plant Stomata anatomy & histology, Plant Stomata ultrastructure, Seasons, Soil chemistry, Triticum ultrastructure, Biological Transport physiology, Nitrous Oxide metabolism, Plant Leaves physiology, Plant Transpiration physiology, Triticum anatomy & histology, Triticum metabolism
- Abstract
Experiments were conducted to study the dynamics of nitrous oxide (N₂O) emission from wheat varieties viz., Sonalika, HUW 468, HUW 234 and DBW 14 grown in alluvial soils of North Bank Plain Agroclimatic Zone of Assam, India. Attempts were made to find out the relationship of N₂O emission with plant morphophysiological, anatomical and soil properties. N₂O fluxes from wheat varieties ranged from 40 μg N₂O-N m⁻² h⁻¹ to 295 μg N₂O-N m⁻² h⁻¹. Soil organic carbon and soil temperature have shown significant relationship with N₂O flux. The rate of leaf transpiration recorded from the wheat varieties at different growth stages exhibited a positive correlation with N₂O emission suggesting that movement of N₂O along with the transpirational water flow may be an important mechanism of N₂O transport and emission through wheat plants. Anatomical investigation by scanning electron microscope revealed that N₂O emission has relationship with stomatal frequency of leaf and leaf sheaths. Variety HUW 234 with the highest stomatal frequency of leaf and leaf sheath also recorded higher seasonal N₂O emission compared to other varieties. Seasonal N₂O emission (E(sif)) of the varieties ranged from 3.25 to 3.81 kg N₂O-N ha⁻¹. Significant variations in E(sif) values were recorded within the varieties.
- Published
- 2012
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27. Prevalence, molecular fingerprinting and drug resistance profile of enterovirulent Escherichia coli isolates from free-ranging yaks of Tawang district, Arunachal Pradesh, India.
- Author
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Bandyopadhyay S, Lodh C, Sarkar M, Ghosh MK, Bera AK, Bhattacharyya D, Mondal DK, and Baruah KK
- Subjects
- Animals, Cattle, Cattle Diseases microbiology, DNA Fingerprinting veterinary, DNA, Bacterial genetics, Diarrhea epidemiology, Diarrhea microbiology, Enteropathogenic Escherichia coli classification, Enteropathogenic Escherichia coli isolation & purification, Enteropathogenic Escherichia coli pathogenicity, Enterotoxigenic Escherichia coli classification, Enterotoxigenic Escherichia coli isolation & purification, Enterotoxigenic Escherichia coli pathogenicity, Escherichia coli Infections epidemiology, Escherichia coli Infections microbiology, India, Phylogeny, Polymerase Chain Reaction veterinary, Prevalence, Random Amplified Polymorphic DNA Technique veterinary, Sequence Analysis, DNA veterinary, Shiga-Toxigenic Escherichia coli classification, Shiga-Toxigenic Escherichia coli isolation & purification, Shiga-Toxigenic Escherichia coli pathogenicity, Virulence Factors genetics, Virulence Factors isolation & purification, Cattle Diseases epidemiology, Diarrhea veterinary, Drug Resistance, Multiple, Bacterial, Enteropathogenic Escherichia coli genetics, Enterotoxigenic Escherichia coli genetics, Escherichia coli Infections veterinary, Shiga-Toxigenic Escherichia coli genetics
- Abstract
Of 273 samples (rectal swab) collected from free-ranging yaks of Tawang district, Arunachal Pradesh, 42 Shiga toxin-producing Escherichia coli (STEC), six enteropathogenic E. coli (EPEC) and 27 enterotoxigenic E. coli (ETEC) strains were isolated. All the STEC and EPEC strains were further investigated for respective stx variants (for STEC only) and additional putative virulence factors. The 27 ETEC strains were also screened for characteristic enterotoxin gene(s) and colonization factors. Occurrence of ETEC was significantly (p < 0.05) higher in the diarrheic yaks and yaks of less than 1 year of age. Majority of enterovirulent E. coli isolates were resistant to amikacin, azithromycin, chloramphenicol, colistin, doxycycline, furazolidone, nalidixic acid, nitrofurantoin, streptomycin and tetracycline. Dendrogram, constructed with molecular fingerprinting profiles obtained from RAPD (Randomly Amplified Polymorphic DNA) and ERIC (Enterobacterial Repetitive Intergenic Consensus) PCR, placed the isolates in different clusters irrespective of their serotypes, virulence gene and drug resistance pattern. Collectively, the study indicates that yaks, being a potential reservoir of multidrug resistant STEC and EPEC, may represent significant risk to public health in this region. Higher recovery of ETEC isolates from yaks with diarrhea points out that ETEC may be a major determinant for repeated occurrence of diarrhea in yaks.
- Published
- 2012
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28. Effect of method and time of first colostrum feeding on serum immunoglobulin concentration, health status and body weight gain in mithun (Bos frontalis) calves.
- Author
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Mech A, Dhali A, Baruah KK, Singh RK, Mondal SK, and Rajkhowa C
- Subjects
- Animals, Animals, Newborn blood, Animals, Newborn physiology, Time Factors, Colostrum metabolism, Immunoglobulins blood, Ruminants blood, Ruminants physiology, Weight Gain physiology
- Abstract
The effect of method and time of first colostrum feeding on the concentration of serum immunoglobulin (Ig) was evaluated in mithun (Bos frontalis) calves. The hypotheses were that the variable method and time of first colostrum feeding might affect the level of serum Ig and in turn the growth performance and health status of the claves during the early age. The newborn calves were randomly allotted to one of the four experimental groups - G-1: allowed to suckle the dam at own choice, G-2: separated immediately after birth and allowed to suckle the dam first at 6 h and then at own choice, G-3: bottle fed ad libitum colostrum of its own dam first at 6 h and then at 6-h intervals until 24 h, G-4: bottle fed ad libitum colostrum of its own dam within 1 h, at 6 h and then at 6-h intervals until 24 h. The concentrations of IgG, IgM, and IgA were lowest (p < 0.01) at birth and increased following colostrum feeding irrespective of the experimental group. Highest concentrations of all the Ig classes were observed at 12-24 h after birth. The concentrations then transiently decreased from day 7 to 14, and then steadily increased after day 28. The concentrations of IgG (p < 0.01) and IgA (p < 0.05) were higher in G-1 in relation to the other groups during the first week after birth. Similarly, higher concentration of IgA (p < 0.05) was found in G-1 in relation to the other groups during the rest of the experimental period. The apparent absorption efficiency of colostral IgG was higher (p < 0.05) in G-4 in relation to G-3. Growth rate and health status were not influenced by the method and time of first colostrum feeding. In conclusion, a 6-h delay in the first colostrum feeding reduced the level of serum Ig noticeably., (© 2010 Blackwell Verlag GmbH.)
- Published
- 2011
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29. Intake, digestibility and nitrogen balance in Mithun (Bos frontalis) offered urea-treated paddy straw based feed blocks.
- Author
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Sinha D, Prakash B, Neog BN, Baruah KK, Sarmah S, and Rajkhowa C
- Subjects
- Animal Feed analysis, Animal Nutritional Physiological Phenomena, Animals, Diet veterinary, Male, Nutritive Value, Digestion physiology, Eating, Nitrogen metabolism, Plant Stems chemistry, Ruminants physiology, Urea chemistry
- Abstract
The aim of the study was to determine the effect of feeding feed blocks containing varying proportion of urea-treated paddy straw (UTPS) on dry matter (DM) intake (DMI), nutrient utilization and N balance in Mithun. For the purpose, four adult male Mithun (279.5 ± 8.2 kg) were selected and offered four experimental rations viz. R(1) (Napier fodder + concentrate at 60:40), R(2) (UTPS + concentrate at 50:50), R(3) (UTPS + concentrate at 60:40) and R(4) (UTPS + concentrate at 70:30) in 4 × 4 Latin square design. The DMI % of body weight was 2.59, 2.96, 2.85 and 2.77 and the DMI g kg(-1) W(0.75) was 107, 123, 118 and 115 in Mithun fed R(1), R(2), R(3) and R(4), respectively. The mean DMI was (P < 0.01) higher in animals fed R(2) and R(3) than R(1) and R(4), whereas the water intake was (P < 0.01) higher in Mithun fed R(2), R(3) and R(4) than R(1). The digestibility of DM, organic matter, crude protein, crude fibre, neutral detergent fibre and cellulose were (P < 0.05) higher in animals fed R(2), R(3) and R(4) than R(1). A positive N balance was observed in all the experimental animals, with higher (P < 0.05) values among the animals offered R(2), R(3) and R(4) than R(1). The digestible crude protein and total digestible nutrient intakes were higher (P < 0.05) in Mithun fed R(2) and R(3) than R(1) and R(4). It is concluded that the UTPS can be incorporated up to 70% to formulate the complete feed/feed block and can be used for feeding of Mithun under complete confinement system.
- Published
- 2011
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30. Comparative nutrient utilization, growth, and rumen enzyme profile of mithun (Bos frontalis) and Tho-tho cattle (Bos indicus) fed on tree-leaves-based ration.
- Author
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Das KC, Haque N, Baruah KK, Rajkhowa C, and Mondal M
- Subjects
- Agriculture methods, Animals, Body Weight, Cellulase metabolism, Endo-1,4-beta Xylanases metabolism, India, Male, Peptide Hydrolases metabolism, Plant Leaves chemistry, Species Specificity, Urease metabolism, alpha-Amylases metabolism, alpha-Glucosidases metabolism, beta-Glucosidase metabolism, Animal Nutritional Physiological Phenomena physiology, Cattle growth & development, Diet, Rumen enzymology
- Abstract
A study was conducted to compare the nutrient utilization, growth, and rumen enzyme profile of mithun (Bos frontalis) and Tho-tho cattle (Bos indicus) reared in the same feeding and managemental conditions. For the purpose, male mithun (n = 8) and male Tho-tho cattle (n = 8) of 1.5 years age, selected from the farm of National Research Centre on Mithun, Nagaland, India, were fed on mixed-tree-leaves-based ration as per the requirement of NRC (2001) for cattle for 12 months. Average daily gain (ADG), average dry matter intake (DMI), and feed conversion ratio (FCR) for all animals were recorded. A metabolic trial was conducted at 6 months of the experiment to assess the digestibility coefficient of different nutrients and nutritive value of ration. At 12 months of the experiment, rumen liquor was collected from all animals and analyzed for rumen enzyme profiles, viz., carboxymethylcellulase, xylanase, α-amylase, β-glucosidase, α-glucosidase, urease, and protease. It was found that ADG (507.8 g vs 392.8 g), DM intake (6.59 vs 5.85 kg/day) and DMI/W(0.75) (98.75 g vs 91.00 g/day), crude protein intake (780 vs 700 g/day), and total digestible nutrient intake (3.65 vs 3.32 kg/day) were higher (p < 0.05) in mithun than cattle. The nitrogen balance was higher and FCR was better (p < 0.05) in mithun compared with cattle. The digestibility coefficient of different nutrients was similar (p > 0.05) between the species. The microbial enzyme profiles of mithun and cattle were not different (p > 0.05). The better growth performance of mithun than cattle as found in the present study clearly indicates that the mithun has higher genetic potential for growth than Tho-tho cattle of north-eastern hilly region of India.
- Published
- 2011
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31. Detection of bovine herpesvirus 1 sequences in yaks (Bos grunniens) with keratoconjunctivitis, using a highly sensitive nested polymerase chain reaction.
- Author
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Bandyopadhyay S, Das S, Baruah KK, Chakravarty P, Chakrabarty D, Sarkar T, Pal B, De S, Pan D, Bera AK, Bandyopadhyay S, and Bhattacharya D
- Subjects
- Animals, Antibodies, Viral blood, Case-Control Studies, Cattle, Conjunctiva virology, DNA, Viral analysis, Herpesviridae Infections virology, Herpesvirus 1, Bovine genetics, Herpesvirus 1, Bovine immunology, Polymerase Chain Reaction standards, Polymorphism, Single-Stranded Conformational, Sensitivity and Specificity, Herpesviridae Infections veterinary, Herpesvirus 1, Bovine isolation & purification, Keratoconjunctivitis, Infectious virology, Polymerase Chain Reaction veterinary
- Abstract
Thirty-seven yaks (Bos grunniens) with keratoconjunctivitis and 22 healthy yaks were used to investigate the role of bovine herpesvirus 1 (BoHV-1) in keratoconjunctivitis in yaks. Nucleic acid sequences of BoHV-1 glycoproteins B and E were detected in conjunctival swabs from all yaks with keratoconjunctivitis using a nested polymerase chain reaction (PCR). In 21 yaks, BoHV-1 sequences were detected along with Moraxella bovis (M. bovis) and Neisseria spp. The amplified BoHV-1 sequences were identical, and no nucleotide variation was observed when compared with a BoHV-1 reference strain using single-strand conformation polymorphism analysis of the amplified DNA sequences. Interestingly, BoHV-1 sequences could not be detected in samples from healthy yaks. However, conjunctival swabs from two healthy yaks (9.09%) yielded M. bovis and Neisseria spp. Samples from 35 yaks with keratoconjunctivitis showed positive reactions in an avidin biotin enzyme-linked immunosorbent assay for BoHV-1 antibodies; all the healthy yaks were seronegative. This is the first report of a possible association of BoHV-1 with keratoconjunctivitis in yaks.
- Published
- 2010
- Full Text
- View/download PDF
32. Plant physiological and soil characteristics associated with methane and nitrous oxide emission from rice paddy.
- Author
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Baruah KK, Gogoi B, and Gogoi P
- Abstract
Methane (CH4) and nitrous oxide (N2O) are important greenhouse gases causing global warming and climate change. Efforts were made to analyze the CH4 and N2O flux in relation to plant and soil factors from rice (Oryza sativa L.) paddy. Ten popularly grown rice varieties namely Rashmisali, Bogajoha, Basmuthi, Lalkalamdani, Choimora (traditional varieties); Mahsuri, Moniram, Kushal, Gitesh and Profulla (high yielding varieties = HYV) were grown during monsoon season of July 2006. The CH4 and N2O emissions were measured the date of transplanting onwards at weekly interval along with soil and plant parameters. The seasonal integrated CH4 and N2O emission (Esif) from rice ranged from 8.13 g m(-2) to 13.00 g m(-2) and 121.63 mg N2O-N m(-2) to 189.46 mg N2O-N m(-2), respectively. Variety Gitesh emitted less N2O and CH4 amongst all the rice varieties. Both CH4 and N2O emission exhibited a significant positive correlation with leaf area, leaf number, tiller number and root dry weight. Soil organic carbon of the experimental field was associated with both CH4 and N2O emission whereas nitrate-N content of soil was associated with N2O emission. Methane emission showed significant positive correlations with soil temperature and crop photosynthetic rate. Traditional rice varieties with profuse vegetative growth recorded higher CH4 and N2O fluxes compared to HYVs. Gitesh and Kushal having low seasonal CH4 and N2O emission with higher yield potential can be recommended as low greenhouse gas emitting rice varieties.
- Published
- 2010
- Full Text
- View/download PDF
33. Early puberty in local Naga boar of India: assessment through epididymal spermiogram and in vivo pregnancy.
- Author
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Karunakaran M, Mondal M, Rajarajan K, Karmakar HD, Bhat BP, Das J, Bora B, Baruah KK, and Rajkhowa C
- Subjects
- Acrosome physiology, Animals, Female, Male, Pregnancy, Sperm Count veterinary, Sperm Motility physiology, Swine, Epididymis physiology, Sexual Maturation physiology, Spermatozoa physiology, Swine, Miniature physiology
- Abstract
Male Naga pig of India, a miniature breed is known for its meat quality and early puberty. No scientific efforts were made to verify the farmers' view that this breed reaches puberty at around 2 months of age. A preliminary study was, therefore, conducted with the objectives: (a) to find out the age at puberty based on mature spermiogram and in vivo pregnancy and (b) to record the sperm morphology in different parts of the epididymis. Animals were selected from two different age groups: group I aged 53 days and 2.4 kg and group II of 85 days and 3.0 kg. Semen samples collected from different sections of epididymis were analyzed for sperm motility, live spermatozoa, and morphological abnormalities. Motility increased (P<0.01) and live spermatozoa and total morphological abnormalities decreased (P<0.001) from caput through cauda epididymis in both the groups. Sperm motility, live spermatozoa and morphologically normal spermatozoa in each section of the epididymis were higher (P<0.01) in group II than I. Boars with >60% progressive motility, >70% live spermatozoa, <15% total morphological abnormalities and <10% abnormal acrosomes in cauda epididymal spermatozoa were considered mature spermiogram. As per this definition, pigs of group II had only mature spermiogram. In vivo pregnancy confirmation indicated that Naga boar could impregnate female as early as 90 days of age. In conclusion, Naga boar attained puberty by not later than 3 months with 3.0 kg, which is the lowest body weight at puberty in this species reported so far, as reflected by mature epididymal spermiogram and in vivo pregnancy confirmation.
- Published
- 2009
- Full Text
- View/download PDF
34. Development of methane emission factors for Indian paddy fields and estimation of national methane budget.
- Author
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Gupta PK, Gupta V, Sharma C, Das SN, Purkait N, Adhya TK, Pathak H, Ramesh R, Baruah KK, Venkatratnam L, Singh G, and Iyer CS
- Subjects
- Carbon analysis, India, Oryza, Seasons, Soil, Agriculture, Methane analysis
- Abstract
A state-wise assessment of methane (CH(4)) budget for Indian paddies, based on a decadal measurement data across India is presented for the calendar year (CY) 1994, the base year for India's Initial National Communication (NATCOM) to the United Nations Framework Convention on Climate Change (UNFCCC), along with national trend from CY 1979 to 2006. The NATCOM CH(4) emission factors (EFs) for Indian paddy cultivation areas, generally having less than 0.7% of soil organic carbon (SOC), have been estimated as 17.48+/-4 g m(-2) for irrigated continuously flooded (IR-CF), 6.95+/-1.86 g m(-2) for rain-fed drought prone (RF-DP), 19+/-6 g m(-2) for rain-fed flood prone (RF-FP) and deep-water (DW), 6.62+/-1.89 g m(-2) for irrigated intermittently flooded single aeration (IR-IF-SA) and 2.01+/-1.49 g m(-2) for IR-IF multiple aeration (MA) paddy water regimes. The state-wise study for 1994 has indicated national CH(4) budget estimate of 4.09+/-1.19 Tg y(-1) and the trend from 1979 to 2006 was in the range of 3.62+/-1 to 4.09+/-1.19 Tg y(-1). Four higher emitting or "hot spot" states (West Bengal, Bihar, Madhya Pradesh and Uttar Pradesh) have accounted for 53.9% of total CH(4) emission with RF-FP paddy water regime as the major contributor. CH(4) emissions were enhanced by factors such as SOC ( approximately 1.5 times due to increase in SOC by approximately 1.8 times), paddy cultivars (approximately 1.5 times), age of seedlings (approximately 1.4 times), and seasons (approximately 1.8 times in Kharif or monsoon than in Rabi or winter season).
- Published
- 2009
- Full Text
- View/download PDF
35. Methane emission associated with anatomical and morphophysiological characteristics of rice (Oryza sativa) plant.
- Author
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Das K and Baruah KK
- Subjects
- Algorithms, Methane chemistry, Microscopy, Electron, Scanning, Oryza ultrastructure, Plant Leaves anatomy & histology, Plant Leaves metabolism, Plant Leaves ultrastructure, Plant Transpiration physiology, Seasons, Water metabolism, Methane metabolism, Oryza anatomy & histology, Oryza metabolism
- Abstract
Plant-mediated transport is the primary route of methane (CH(4)) emission from the reduced paddy field to the aboveground atmosphere. Experiments were conducted at North Bank Plain Agro-climatic Zone of Assam, India, during monsoon rice-growing season (July to December 2006) to elucidate the influences of anatomical and morphophysiological characteristics of rice (Oryza sativa L.) cultivars on methane emission from submerged agroecosystem. Ten rice cultivars were grown in light-textured loamy soil under rainfed uniform field condition. Among the 10 cultivars, 5 were traditional rice genotypes commonly grown in the agroclimatic zone and the other 5 were improved high-yielding varieties. Wide variation in CH(4) flux was recorded among the rice cultivars, which may be regulated by the difference in anatomical and morphophysiological characteristics of rice plant. Microscopic analysis of stem portion showed that high- and medium-CH(4)-emitting cultivars recorded higher size of the medullary cavity. Leaf area and transpirational rates were also found to be higher in high-CH(4)-emitting varieties. Scanning electron microscopic analysis revealed higher stomatal frequencies in high-methane-emitting cultivars. Data presented in this study suggest that variation in anatomical and morphophysiological characteristics among different rice genotypes may influence CH(4) emission from paddy fields.
- Published
- 2008
- Full Text
- View/download PDF
36. Environment. Environmental monitoring network for India.
- Author
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Sundareshwar PV, Murtugudde R, Srinivasan G, Singh S, Ramesh KJ, Ramesh R, Verma SB, Agarwal D, Baldocchi D, Baru CK, Baruah KK, Chowdhury GR, Dadhwal VK, Dutt CB, Fuentes J, Gupta PK, Hargrove WW, Howard M, Jha CS, Lal S, Michener WK, Mitra AP, Morris JT, Myneni RR, Naja M, Nemani R, Purvaja R, Raha S, Vanan SK, Sharma M, Subramaniam A, Sukumar R, Twilley RR, and Zimmerman PR
- Published
- 2007
- Full Text
- View/download PDF
37. Methane emission characteristics and its relations with plant and soil parameters under irrigated rice ecosystem of northeast India.
- Author
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Gogoi N, Baruah KK, Gogoi B, and Gupta PK
- Subjects
- Crops, Agricultural, India, Seasons, Time Factors, Water Supply, Air Pollutants analysis, Ecosystem, Methane analysis, Oryza metabolism, Soil analysis
- Abstract
Methane flux from rice varieties grown under two identical soils of Assam were monitored. In the first experiment, variety Jaya and GRT was grown in sandy loam soil of Lower Brahmaputra Valley Zone of Assam and the second experiment was conducted with variety Jyotiprasad and Bishnuprasad in sandy to sandy loam soils of Upper Brahmaputra Valley Zones of Assam. Methane flux recorded from variety Jyotiprasad and GRT was higher compared to variety Bishnuprasad and Jaya. The seasonal integrated flux recorded was 10.76 gm(-2), 9.98 gm(-2), 9.74 gm(-2) and 11.31 gm(-2) for variety GRT, Jaya, Bishnuprasad and Jyotiprasad, respectively. All the varieties exhibited two methane peaks one at maximum tillering stage and other at panicle initiation stage of the crop. Crop growth parameters such as leaf number, number of tillers and leaf area index (LAI) showed strong positive relationship with total methane flux. In both the experiments it was calculated that CH4 emission was substantially influenced by crop phenology and growth. This study emphasise the relationship of different growth parameters with methane emission.
- Published
- 2005
- Full Text
- View/download PDF
38. Studies on thermal degradation and termite resistant properties of chemically modified wood.
- Author
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Deka M, Saikia CN, and Baruah KK
- Subjects
- Animals, Kinetics, Microscopy, Electron, Scanning, Isoptera, Temperature, Wood
- Abstract
A series of experiments were carried out to examine the resistant capacity of a chemically treated hard wood, Anthocephalus cadamba (Roxb) Miq. to thermal and termite degradation. The treatment with thermosetting resins viz. urea formaldehyde (UF), melamine formaldehyde (MF) and phenol formaldehyde (PF) at 31-33 levels of weight percent gain (WPG) increased the strength property i.e. modulus of rupture (MOR) by 7.50-21.02% and stiffness i.e. modulus of elasticity (MOE) by 9.50-12.18% over the untreated one with no remarkable effect on specific gravity. The treated samples were found resistant to termite attack, while the untreated one was badly damaged by termites on 12 months' exposure to a termite colony. The thermal degradations of untreated and treated wood samples were studied using thermogravimetric (TGA) and differential thermogravimetric (DTG) techniques at heating rates 20 and 30 degrees C min(-1) in temperature range 30-650 degrees C. The treated wood was found to be thermally more stable than the untreated one.
- Published
- 2002
- Full Text
- View/download PDF
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