26 results on '"Barbara Kludkiewicz"'
Search Results
2. Characterization of silk genes in Ephestia kuehniella and Galleria mellonella revealed duplication of sericin genes and highly divergent sequences encoding fibroin heavy chains
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Bulah Chia-hsiang Wu, Ivo Sauman, Houda Ouns Maaroufi, Anna Zaloudikova, Martina Zurovcova, Barbara Kludkiewicz, Miluse Hradilova, and Michal Zurovec
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synteny ,mucin ,mediterranean flour moth ,wax moth ,pyralidae ,crambidae ,Biology (General) ,QH301-705.5 - Abstract
Silk is a secretory product of numerous arthropods with remarkable mechanical properties. In this work, we present the complete sequences of the putative major silk proteins of E. kuehniella and compare them with those of G. mellonella, which belongs to the same moth family Pyralidae. To identify the silk genes of both species, we combined proteomic analysis of cocoon silk with a homology search in transcriptomes and genomic sequences to complement the information on both species. We analyzed structure of the candidate genes obtained, their expression specificity and their evolutionary relationships. We demonstrate that the silks of E. kuehniella and G. mellonella differ in their hydrophobicity and that the silk of E. kuehniella is highly hygroscopic. In our experiments, we show that the number of genes encoding sericins is higher in G. mellonella than in E. kuehniella. By analyzing the synteny of the chromosomal segment encoding sericin genes in both moth species, we found that the region encoding sericins is duplicated in G. mellonella. Finally, we present the complete primary structures of nine fibH genes and proteins from both families of the suborder Pyraloidea and discuss their specific and conserved features. This study provides a foundation for future research on the evolution of silk proteins and lays the groundwork for future detailed functional studies.
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- 2022
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3. Atomic resolution structure of a protein prepared by non-enzymatic His-tag removal. Crystallographic and NMR study of GmSPI-2 inhibitor.
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Edyta Kopera, Wojciech Bal, Martina Lenarčič Živkovič, Angela Dvornyk, Barbara Kludkiewicz, Krystyna Grzelak, Igor Zhukov, Włodzimierz Zagórski-Ostoja, Mariusz Jaskolski, and Szymon Krzywda
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Medicine ,Science - Abstract
Purification of suitable quantity of homogenous protein is very often the bottleneck in protein structural studies. Overexpression of a desired gene and attachment of enzymatically cleavable affinity tags to the protein of interest made a breakthrough in this field. Here we describe the structure of Galleria mellonella silk proteinase inhibitor 2 (GmSPI-2) determined both by X-ray diffraction and NMR spectroscopy methods. GmSPI-2 was purified using a new method consisting in non-enzymatic His-tag removal based on a highly specific peptide bond cleavage reaction assisted by Ni(II) ions. The X-ray crystal structure of GmSPI-2 was refined against diffraction data extending to 0.98 Å resolution measured at 100 K using synchrotron radiation. Anisotropic refinement with the removal of stereochemical restraints for the well-ordered parts of the structure converged with R factor of 10.57% and Rfree of 12.91%. The 3D structure of GmSPI-2 protein in solution was solved on the basis of 503 distance constraints, 10 hydrogen bonds and 26 torsion angle restraints. It exhibits good geometry and side-chain packing parameters. The models of the protein structure obtained by X-ray diffraction and NMR spectroscopy are very similar to each other and reveal the same β2αβ fold characteristic for Kazal-family serine proteinase inhibitors.
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- 2014
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4. The expansion of genes encoding soluble silk components in the greater wax moth, Galleria mellonella
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Hana Sehadova, Peter Konik, Miluše Hradilová, Barbara Kludkiewicz, Lucie Kucerova, Anna Zaloudikova, František Sehnal, Tereza Konikova, Hynek Strnad, and Michal Zurovec
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0106 biological sciences ,Proteome ,Silk ,Fibroin ,macromolecular substances ,Moths ,Proteomics ,01 natural sciences ,Biochemistry ,Sericin ,Lepidoptera genitalia ,03 medical and health sciences ,Labial glands ,Animals ,Amino Acid Sequence ,Sericins ,Molecular Biology ,Phylogeny ,Glycoproteins ,030304 developmental biology ,0303 health sciences ,Base Sequence ,biology ,fungi ,Mucins ,technology, industry, and agriculture ,equipment and supplies ,biology.organism_classification ,Galleria mellonella ,010602 entomology ,SILK ,Secretory protein ,Larva ,Insect Science ,Insect Proteins ,Sequence Alignment - Abstract
Lepidopteran silk is a complex assembly of proteins produced by a pair of highly specialized labial glands called silk glands. Silk composition has been examined only in a handful of species. Here we report on the analysis of silk gland-specific transcriptomes from three developmental stages of the greater wax moth, Galleria mellonella, combined with proteomics, Edman microsequencing and northern blot analysis. In addition to the genes known earlier, we identified twenty seven candidate cDNAs predicted to encode secretory proteins, which may represent novel silk components. Eight were verified by proteomic analysis or microsequencing, and several others were confirmed by similarity with known silk genes and their expression patterns. Our results revealed that most candidates encode abundant secreted proteins produced by middle silk glands including ten sericins, two seroins, one or more mucins, and several sequences without apparent similarity to known proteins. We did not detect any novel PSG-specific protein, confirming that there are only three fibroin subunits. Our data not only show that the number of sericin genes in the greater wax moth is higher than in other species thus far examined, but also the total content of soluble proteins in silk is twice as high in G. mellonella than in B. mori or A. yamamai. Our data will serve as a foundation for future identification and evolutionary analysis of silk proteins in the Lepidoptera.
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- 2019
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5. Modular structure, sequence diversification and appropriate nomenclature of seroins produced in the silk glands of Lepidoptera
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Miluše Hradilová, Michal Zurovec, Barbara Kludkiewicz, František Sehnal, Hynek Strnad, and Lucie Kucerova
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0301 basic medicine ,Signal peptide ,Protein Conformation ,Silk ,lcsh:Medicine ,Biology ,Article ,Lepidoptera genitalia ,03 medical and health sciences ,0302 clinical medicine ,Phylogenetics ,Complementary DNA ,Animals ,lcsh:Science ,Databases, Protein ,Clade ,Multidisciplinary ,Phylogenetic tree ,cDNA library ,lcsh:R ,fungi ,Alternative splicing ,Lepidoptera ,Alternative Splicing ,030104 developmental biology ,Evolutionary biology ,Insect Proteins ,lcsh:Q ,030217 neurology & neurosurgery - Abstract
Seroins are small lepidopteran silk proteins known to possess antimicrobial activities. Several seroin paralogs and isoforms were identified in studied lepidopteran species and their classification required detailed phylogenetic analysis based on complete and verified cDNA sequences. We sequenced silk gland-specific cDNA libraries from ten species and identified 52 novel seroin cDNAs. The results of this targeted research, combined with data retrieved from available databases, form a dataset representing the major clades of Lepidoptera. The analysis of deduced seroin proteins distinguished three seroin classes (sn1-sn3), which are composed of modules: A (includes the signal peptide), B (rich in charged amino acids) and C (highly variable linker containing proline). The similarities within and between the classes were 31–50% and 22.5–25%, respectively. All species express one, and in exceptional cases two, genes per class, and alternative splicing further enhances seroin diversity. Seroins occur in long versions with the full set of modules (AB1C1B2C2B3) and/or in short versions that lack parts or the entire B and C modules. The classes and the modular structure of seroins probably evolved prior to the split between Trichoptera and Lepidoptera. The diversity of seroins is reflected in proposed nomenclature.
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- 2019
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6. Silk of the common clothes moth, Tineola bisselliella, a cosmopolitan pest belonging to the basal ditrysian moth line
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Lenka Rouhova, Hana Sehadova, Michal Zurovec, Michal Sery, Peter Konik, Barbara Kludkiewicz, and Lucie Kucerova
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Proteomics ,0106 biological sciences ,Silk ,Fibroin ,Zoology ,macromolecular substances ,Moths ,01 natural sciences ,Biochemistry ,Sericin ,Lepidoptera genitalia ,03 medical and health sciences ,Animals ,Tineola bisselliella ,Protease Inhibitors ,Sericins ,Molecular Biology ,030304 developmental biology ,0303 health sciences ,biology ,fungi ,technology, industry, and agriculture ,equipment and supplies ,biology.organism_classification ,Biological Evolution ,010602 entomology ,SILK ,Larva ,Insect Science ,Insect Proteins ,PEST analysis ,Fibroins ,Clothes moth - Abstract
Many lepidopteran larvae produce silk secretions to build feeding tubes and cocoons that play important protective roles in their lives. Recent research on the silk of bombycoid and pyralid moths has shown that it contains several highly abundant silk components with remarkable mechanical properties. It was also found to contain a number of other proteins of which the functions have yet to be identified. To gain an overview of the silk composition in more primitive lepidopteran species and to identify the core silk components common to most species, we analyzed the cocoon proteins of Tineola bisselliella, which belongs to the basal ditrysian moth line. Using de novo transcriptome sequencing combined with mass spectrometry (MS)-based proteomics, we detected more than 100 secretory proteins in the silk cocoons. Fibroin, sericins, and protease inhibitors were found to be the most abundant proteins, along with several novel candidate silk components. We also verified the tissue and developmental stage specificity of the silk protein expression and characterized the morphology of both the silk glands and silk in T. bisselliella. Our study provides a detailed analysis of silk in the primitive moth, expands the known set of silk-specific genes in Lepidoptera, and helps to elucidate their evolutionary relationships.
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- 2021
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7. Protease Inhibitor from Insect Silk-Activities of Derivatives Expressed In Vitro and in Transgenic Potato
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Oxana Skoková Habuštová, Dalibor Kodrík, František Sehnal, Oldřich Navrátil, Barbara Kludkiewicz, Konstantin Vinokurov, Zdeňka Svobodová, and Vendulka Horáčková
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Phytophthora infestans ,medicine.medical_treatment ,Transgene ,Gene Expression ,Bioengineering ,Spodoptera ,Applied Microbiology and Biotechnology ,Biochemistry ,Pichia ,Pichia pastoris ,Transformation, Genetic ,medicine ,Animals ,Molecular Biology ,Disease Resistance ,Plant Diseases ,Solanum tuberosum ,Serine protease ,Expression vector ,Protease ,biology ,fungi ,Subtilisin ,food and beverages ,General Medicine ,Agrobacterium tumefaciens ,Plants, Genetically Modified ,biology.organism_classification ,Molecular biology ,Lepidoptera ,biology.protein ,Insect Proteins ,Extracellular Space ,Genetic Engineering ,Biotechnology - Abstract
Several recombinant derivatives of serine protease inhibitor called silk protease inhibitor 2 (SPI2), which is a silk component in Galleria mellonella (Lepidoptera, Insecta), were prepared in the expression vector Pichia pastoris. Both the native and the recombinant protease inhibitors were highly active against subtilisin and proteinase K. The synthetic SPI2 gene with Ala codon in the P1 position was fused with mGFP-5 to facilitate detection of the transgene and its protein product. A construct of the fusion gene with plant regulatory elements (promoter 35S and terminator OCS) was inserted into the binary vector pRD400. The final construct was introduced into Agrobacterium tumefaciens that was then used for genetic transformation of the potato variety Velox. The transgene expression was monitored with the aid of ELISA employing polyclonal antibody against natural SPI2. In vitro tests showed increased resistance to the late blight Phytophthora infestans in several transformed lines. No effect was seen on the growth, mortality, life span or reproduction of Spodoptera littoralis (Lepidoptera, Insecta) caterpillars, while feeding on transformed potato plants expressing the fusion protein, indicating that the transformed potatoes may be harmless to non-target organisms.
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- 2013
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8. Sericin Composition in the Silk of Antheraea yamamai
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Michal Zurovec, Hynek Strnad, Hana Sehadova, Barbara Kludkiewicz, František Sehnal, Naoyuki Yonemura, Peter Konik, Lucie Kucerova, Ligia Cota Vieira, and Dalibor Kodrík
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0106 biological sciences ,0301 basic medicine ,Polymers and Plastics ,Silk ,Fibroin ,Bioengineering ,Biology ,Moths ,01 natural sciences ,Sericin ,Biomaterials ,Bombycidae ,03 medical and health sciences ,Saturniidae ,Bombyx mori ,Materials Chemistry ,Antheraea yamamai ,Animals ,Amino Acid Sequence ,Sericins ,Peptide sequence ,Phylogeny ,Sequence Homology, Amino Acid ,fungi ,biology.organism_classification ,010602 entomology ,030104 developmental biology ,SILK ,Biochemistry ,Insect Proteins - Abstract
The silks produced by caterpillars consist of fibroin proteins that form two core filaments, and sericin proteins that seal filaments into a fiber and conglutinate fibers in the cocoon. Sericin genes are well-known in Bombyx mori (Bombycidae) but have received little attention in other insects. This paper shows that Antheraea yamamai (Saturniidae) contains five sericin genes very different from the three sericin genes of B. mori. In spite of differences, all known sericins are characterized by short exons 1 and 2 (out of 3-12 exons), expression in the middle silk gland section, presence of repeats with high contents of Ser and charged amino acid residues, and secretion as a sticky silk component soluble in hot water. The B. mori sericins represent tentative phylogenetic lineages (I) BmSer1 and orthologs in Saturniidae, (II) BmSer2, and (III) BmSer3 and related sericins of Saturniidae and of the pyralid Galleria mellonella. The lineage (IV) seems to be limited to Saturniidae. Concerted evolution of the sericin genes was apparently associated with gene amplifications as well as gene loses. Differences in the silk fiber morphology indicate that the cocktail of sericins linking the filaments and coating the fiber is modified during spinning. Silks are composite biomaterials of conserved function in spite of great diversity of their composition.
- Published
- 2016
9. Peptidase inhibitors from the salivary glands of the cockroach Nauphoeta cinerea
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Barbara Kludkiewicz, Yuliya Taranushenko, František Sehnal, Konstantin Vinokurov, and Dalibor Kodrík
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Signal peptide ,Molecular Sequence Data ,Cockroaches ,Peptide ,Biochemistry ,medicine ,Animals ,Protease Inhibitors ,Amino Acid Sequence ,Molecular Biology ,chemistry.chemical_classification ,Chymotrypsin ,Base Sequence ,biology ,Subtilisin ,Trypsin ,biology.organism_classification ,Proteinase K ,Molecular biology ,Blaberidae ,Amino acid ,Gene Expression Regulation ,chemistry ,Insect Science ,biology.protein ,Peptide Hydrolases ,medicine.drug - Abstract
Inhibitory activity against subtilisin, proteinase K, chymotrypsin and trypsin was detected in the salivary glands and saliva of the cockroach Nauphoeta cinerea (Blattoptera: Blaberidae). Fractionation of the salivary glands extract by affinity chromatography followed by reverse-phase HPLC yielded five subtilisin-inhibiting peptides with molecular masses ranging from 5 to 14 kDa. N-terminal sequences and subsequently full-length cDNAs of inhibitors designated NcPIa and NcPIb were obtained. The NcPIa cDNA contains 216 nucleotides and encodes a pre-peptide of 72 amino-acid residues of which 19 make up the signal peptide. The cDNA of NcPIb consists of 240 nucleotides and yields a putative secretory peptide of 80 amino-acid residues. Mature NcPIa (5906.6 Da, 53 residues) and NcPIb (6713.3 Da, 60 residues) are structurally similar (65.4% amino acid overlap) single-domain Kazal-type peptidase inhibitors. NcPIa with Arg in P1 position and typical Kazal motif VCGSD interacted stoichiometrically (1:1) with subtilisin and was slightly less active against proteinase K. NcPIb with Leu in P1 and modified Kazal motif ICGSD had similar activity on subtilisin and no on proteinase K but was active on chymotrypsin.
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- 2009
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10. Glutathione–ascorbic acid redox cycle and thioredoxin reductase activity in the digestive tract of Leptinotarsa decemlineata (Say)
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Barbara Kludkiewicz, Natraj Krishnan, František Sehnal, and Dalibor Kodrík
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Thioredoxin-Disulfide Reductase ,Antioxidant ,Protein Carbonylation ,medicine.medical_treatment ,Thioredoxin reductase ,Gene Expression ,Ascorbic Acid ,Biology ,medicine.disease_cause ,digestive system ,Biochemistry ,Lipid peroxidation ,chemistry.chemical_compound ,medicine ,Animals ,Molecular Biology ,fungi ,Midgut ,Glutathione ,Ascorbic acid ,Coleoptera ,Gastrointestinal Tract ,Oxidative Stress ,chemistry ,Insect Science ,Oxidation-Reduction ,Oxidative stress - Abstract
In view of the antioxidant role of glutathione (GSH) and ascorbic acid (AA), we have examined capacity of the GSH-AA redox cycle in relation to oxidative stress effects in the midgut of the Colorado potato beetle Leptinotarsa decemlineata. Adult gut harbors a higher capacity to cope with oxidative stress than the larval gut. Protein carbonylation was pronounced in the wall of anterior larval midgut and was generally lower in the food digest than in the gut wall. Restriction of oxidative stress effects in anterior gut lumen manifested by lipid peroxidation and protein carbonylation is interpreted as a mechanism favoring digestion and absorption in the posterior midgut. Presence of high GSH in the posterior midgut and AA in both posterior and anterior midguts of adults points to higher utility of the GSH-AA redox system in limiting oxidative stress to manageable levels. The presence, gene expression and activity of thioredoxin reductase (TrxR) were demonstrated for the first time in L. decemlineata which was markedly higher in the anterior than in the posterior midgut in both stages. It is probably central to the maintenance of reduced GSH levels in the whole gut, despite a GSSG/2GSH redox potential tending towards oxidizing ranging from -183.5 to -124.4mV. Glutathione-dehydroascorbate reductase (G(DHA)R) activity was markedly augmented in adult gut compared with larva, pointing to a more efficient conversion of dehydroascorbate (DHA) to AA. Also, ascorbate peroxidase (APOX) activity was significantly elevated in all gut compartments of adult except the wall of posterior midgut. The results emphasize the potential importance and role of the GSH-AA redox cycle as a defense strategy against oxidative stress in the gut of L. decemlineata.
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- 2009
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11. Positions of disulfide bonds and N-glycosylation site in juvenile hormone binding protein
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Michal Dadlez, Marian Kochman, Andrzej Ożyhar, Anna Lalik, Janusz Debski, Aleksandra Wysłouch-Cieszyńska, Robert Kolodziejczyk, Krystyna Grzelak, and Barbara Kludkiewicz
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Spectrometry, Mass, Electrospray Ionization ,Glycan ,Glycosylation ,animal structures ,Biophysics ,Biochemistry ,Pichia pastoris ,law.invention ,chemistry.chemical_compound ,Sequence Analysis, Protein ,law ,Hemolymph ,Animals ,Protein Isoforms ,N-Glycosylation Site ,Molecular Biology ,chemistry.chemical_classification ,biology ,fungi ,biology.organism_classification ,Yeast ,Protein Structure, Tertiary ,Lepidoptera ,carbohydrates (lipids) ,chemistry ,Larva ,biology.protein ,Recombinant DNA ,Cystine ,Insect Proteins ,Carrier Proteins ,Glycoprotein - Abstract
The juvenile hormone binding protein (JHBP) from Galleria mellonella hemolymph is a glycoprotein composed of 225 amino acid residues. It contains four Cys residues forming two disulfide bridges. In this study, the topography of the disulfide bonds as well as the site of glycan attachment in the JHBP molecule from G. mellonella was determined, using electrospray mass spectrometry. The MS analysis was performed on tryptic digests of JHBP. Our results show that the disulfide bridges link Cys10 and Cys17, and Cys151 and Cys195. Of the two potential N-glycosylation sites in JHBP, Asn4, and Asn94, only Asn94 is glycosylated. This site of glycosylation is also found in the fully biologically active recombinant JHBP expressed in the yeast Pichia pastoris.
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- 2004
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12. Hormonal regulation of the expression of two storage proteins in the larval fat body of the greater wax moth (Galleria mellonella)
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Bronislaw Cymborowski, Małgorzata Beręsewicz, Jakub Godlewski, Barbara Kludkiewicz, and Krystyna Grzelak
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medicine.medical_specialty ,Physiology ,Fat Body ,Phenylcarbamates ,20-Hydroxyecdysone ,Moths ,Biology ,chemistry.chemical_compound ,Internal medicine ,Hemolymph ,medicine ,Animals ,Storage protein ,Secretion ,RNA, Messenger ,Fenoxycarb ,chemistry.chemical_classification ,Dose-Response Relationship, Drug ,fungi ,biology.organism_classification ,Juvenile Hormones ,Galleria mellonella ,Ecdysterone ,Endocrinology ,Gene Expression Regulation ,chemistry ,Larva ,Insect Science ,Juvenile hormone ,Insect Proteins ,Instar ,Carbamates - Abstract
During larval development of the greater wax moth, Galleria mellonella, genes of storage proteins LHP76 and LHP82 are tissue- and stage-specifically expressed. In this study, hormonal regulation of this expression has been investigated in vivo. Messenger RNAs of the juvenile hormone (JH-suppressible) Lhp82 gene are present only during the feeding period of the final larval instar, suggesting that a high level of JH during earlier stages prevents its expression and that a small rise in JH titer observed on day 8 of the final larval instar is responsible for the rapid shut-off of its transcription. Application of 1micro g of JH analog (fenoxycarb) specifically inhibits expression of Lhp82, whereas Lhp76 mRNAs remain at the same level. 20-hydroxyecdysone (20HE) does not exert any inhibitory effects on transcription of Lhp genes when injected in a dose of 0.5 or 1.5 micro g per individual, regardless of larval age. However, the same dose of 20HE significantly lowers the rate of LHPs synthesis within the fat body and completely blocks secretion of LHPs into the hemolymph. Therefore, we propose that 20HE inhibits the synthesis of storage proteins and their secretion without altering the level of mRNAs.
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- 2003
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13. Atomic Resolution Structure of a Protein Prepared by Non-Enzymatic His-Tag Removal. Crystallographic and NMR Study of GmSPI-2 Inhibitor
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Martina Lenarčič Živkovič, Igor Zhukov, Barbara Kludkiewicz, Edyta Kopera, Szymon Krzywda, Wojciech Bal, Mariusz Jaskolski, Angela Dvornyk, Włodzimierz Zagórski-Ostoja, and Krystyna Grzelak
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Protein Structure Comparison ,Crystal structure ,Moths ,Spectrum analysis techniques ,Crystallography, X-Ray ,Biochemistry ,Protein structure ,Macromolecular Structure Analysis ,Peptide bond ,Recombinant Protein Purification ,Enzyme Inhibitors ,Multidisciplinary ,Chemistry ,Hydrogen bond ,Affinity Labels ,Nuclear magnetic resonance spectroscopy ,Macromolecular Crystallography ,Protein Cleavage ,X-ray crystallography ,Crystallographic Techniques ,Medicine ,Insect Proteins ,Endopeptidase K ,Research Article ,Protein Structure ,Protein Purification ,Science ,Recombinant Fusion Proteins ,X-Ray Crystallography ,Molecular Sequence Data ,Structural Characterization ,Dihedral angle ,NMR spectroscopy ,Animals ,Protease Inhibitors ,Computer Simulation ,Amino Acid Sequence ,Molecular Biology ,Nuclear Magnetic Resonance, Biomolecular ,Subtilisin ,Biology and Life Sciences ,Proteins ,Protein Structure, Tertiary ,Serine Protease Inhibitors ,Research and analysis methods ,Crystallography ,Enzymology ,Sequence Alignment ,Purification Techniques - Abstract
Purification of suitable quantity of homogenous protein is very often the bottleneck in protein structural studies. Overexpression of a desired gene and attachment of enzymatically cleavable affinity tags to the protein of interest made a breakthrough in this field. Here we describe the structure of Galleria mellonella silk proteinase inhibitor 2 (GmSPI-2) determined both by X-ray diffraction and NMR spectroscopy methods. GmSPI-2 was purified using a new method consisting in non-enzymatic His-tag removal based on a highly specific peptide bond cleavage reaction assisted by Ni(II) ions. The X-ray crystal structure of GmSPI-2 was refined against diffraction data extending to 0.98 Å resolution measured at 100 K using synchrotron radiation. Anisotropic refinement with the removal of stereochemical restraints for the well-ordered parts of the structure converged with R factor of 10.57% and R free of 12.91%. The 3D structure of GmSPI-2 protein in solution was solved on the basis of 503 distance constraints, 10 hydrogen bonds and 26 torsion angle restraints. It exhibits good geometry and side-chain packing parameters. The models of the protein structure obtained by X-ray diffraction and NMR spectroscopy are very similar to each other and reveal the same β2αβ fold characteristic for Kazal-family serine proteinase inhibitors.
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- 2014
14. Expression of larval hemolymph proteins (Lhp) genes and protein synthesis in the fat body of greater wax moth (Galleria mellonella) larvae during diapause
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Barbara Kludkiewicz, Krystyna Grzelak, Bronislaw Cymborowski, and Jakub Godlewski
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chemistry.chemical_classification ,Larva ,animal structures ,Physiology ,fungi ,Anatomy ,Biology ,Diapause ,biology.organism_classification ,Galleria mellonella ,Biochemistry ,chemistry ,Insect Science ,Hemolymph ,Protein biosynthesis ,Instar ,Storage protein ,Gene - Abstract
When one-day-old, last instar Galleria mellonella larvae are exposed to 18 degrees C they enter diapause and cease further development for several months. During diapause a group of proteins (72-84 kDa) synthesized in the fat body and secreted into the hemolymph is markedly elevated. Partial sequencing of the N-terminus of two proteins from this group confirmed their identity with larval hemolymph proteins (LHP) belonging to the family of hexameric storage proteins. The expression of two Lhp genes of known sequence (Lhp76 and Lhp82) were monitored in both diapausing and non-diapausing individuals. The expression of both genes and subsequent synthesis of the proteins (LHP76 and LHP82) is maintained until at least 90-100 days of diapause.
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- 2001
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15. Functional conservation and structural diversification of silk sericins in two moth species
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František Sehnal, Michal Zurovec, Barbara Kludkiewicz, Jitka Sulitkova, Václav Mach, Robert Fedic, and Lucie Kucerova
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Polymers and Plastics ,Protein Conformation ,RNA Splicing ,Molecular Sequence Data ,Silk ,Fibroin ,Bioengineering ,Moths ,Sericin ,Biomaterials ,Protein structure ,Species Specificity ,Bombyx mori ,Sequence Homology, Nucleic Acid ,Botany ,Materials Chemistry ,Animals ,Amino Acid Sequence ,Sericins ,Peptide sequence ,Bombyx ,biology ,Base Sequence ,fungi ,biology.organism_classification ,Cell biology ,Galleria mellonella ,SILK - Abstract
Sericins are hydrophilic structural proteins produced by caterpillars in the middle section of silk glands and layered over fibroin proteins secreted in the posterior section. In the process of spinning, fibroins form strong solid filaments, while sericins seal the pair of filaments into a single fiber and glue the fiber into a cocoon. Galleria mellonella and the previously examined Bombyx mori harbor three sericin genes that encode proteins containing long repetitive regions. Galleria sericin genes are similar to each other and the protein repeats are built from short and extremely serine-rich motifs, while Bombyx sericin genes are diversified and encode proteins with long and complex repeats. Developmental changes in sericin properties are controlled at the level of gene expression and splicing. In Galleria , MG-1 sericin is produced throughout larval life until the wandering stage, while the production of MG-2 and MG-3 reaches a peak during cocoon spinning.
- Published
- 2013
16. The effect of 20-hydroxyecdysone on expression of genes coding for low molecular weight silk proteins of Galleria mellonella
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Krystyna Grzelak, Barbara Kludkiewicz, and Zofia Lassota
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chemistry.chemical_classification ,Ecdysteroid ,medicine.medical_specialty ,animal structures ,biology ,fungi ,20-Hydroxyecdysone ,biology.organism_classification ,Biochemistry ,In vitro ,Galleria mellonella ,chemistry.chemical_compound ,Endocrinology ,chemistry ,Biosynthesis ,Insect Science ,Internal medicine ,Juvenile hormone ,Gene expression ,medicine ,Nucleotide ,Molecular Biology - Abstract
The low molecular weight Galleria silk proteins of 24 and 29–30 kDa are coded by the 1100 nucleotides long mRNAs of the posterior silk gland (PSG) cells. The synthesis of these proteins starts during the first 2 days of the last instar when the endogenous ecdysteroid titre is very low. The synthesis of 24 kDa protein precedes the synthesis of 30 kDa protein. PSGs from day 1 last instar larvae are sensitive to exogenous 20-hydroxyecdysone (20-HE) in vitro at 0.5 μg/ml concentration causing an increase of 1100 nucleotides long mRNAs. The electrophoretic analysis of the in vitro labelling proteins indicates that 20-HE may induced the synthesis of 30 kDa protein. Juvenile hormone II in vitro suppresses the stimulatory effect of 20-HE. PSGs from day 3 last instar larvae are insensitive to exogenous 20-HE in vitro .
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- 1993
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17. Structure and expression of the silk adhesive protein Ser2 in Bombyx mori
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František Sehnal, Robert Fedic, Yoko Takasu, Toshiki Tamura, Barbara Kludkiewicz, and Michal Zurovec
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Signal peptide ,fungi ,Alternative splicing ,Molecular Sequence Data ,Intron ,Biology ,biology.organism_classification ,Bombyx ,Biochemistry ,Sericin ,Exon ,Gene Expression Regulation ,Bombyx mori ,Insect Science ,Animals ,Amino Acid Sequence ,Cloning, Molecular ,Sericins ,Molecular Biology ,Peptide sequence - Abstract
Sericins are soluble silk components encoded in Bombyx mori by three genes, of which Ser1 and Ser3 have been characterized. The Ser1 and Ser3 proteins were shown to appear later in the last larval instar as the major sericins of cocoon silk. These proteins are, however, virtually absent in the highly adhesive silk spun prior to cocoon spinning, when the larvae construct a loose scaffold for cocoon attachment. We show here that the silk-gland lumen of the feeding last instar larvae contains two abundant adhesive proteins of 230 kDa and 120 kDa that were identified as products of the Ser2 gene. We also describe the sequence, exon-intron structure, alternative splicing and deduced translation products of this gene in the Daizo p50 strain of B. mori. Two mRNAs of 5.7 and 3.1 kb are generated by alternative splicing of the largest exon. The predicted mature proteins contain 1740 and 882 amino acid residues. The repetitive amino acid sequence encoded by exons 9a and 9b is apparently responsible for the adhesiveness of Ser2 products. It has a similar periodic arrangement of motifs containing lysine and proline as a highly adhesive protein of the mussel Mytilus edulis.
- Published
- 2009
18. Comparison of electrochemical immunosensors based on gold nano materials and immunoblot techniques for detection of histidine-tagged proteins in culture medium
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Michał Wąsowicz, Subramanian Viswanathan, Krystyna Grzelak, Hanna Radecka, Barbara Kludkiewicz, and Anzhela Dvornyk
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Immunoblotting ,Biomedical Engineering ,Biophysics ,Nanoparticle ,Biosensing Techniques ,Sensitivity and Specificity ,Nanomaterials ,Gold Colloid ,Electrochemistry ,Histidine ,Detection limit ,Immunoassay ,Chromatography ,Staining and Labeling ,Chemistry ,Proteins ,Reproducibility of Results ,General Medicine ,Equipment Design ,Dielectric spectroscopy ,Culture Media ,Nanostructures ,Equipment Failure Analysis ,Electrode ,Nanorod ,Gold ,Biosensor ,Biotechnology - Abstract
In this work, the direct electrochemical determination of poly-histidine tagged proteins using immunosensor based on anti-His (C-term) antibody immobilized on gold electrodes modified with 1,6-hexanedithiol, gold colloid particles or gold nanorods is described. The recombinant histidine-tagged silk proteinase inhibitor protein (rSPI2-His6) expressed in Pichia system selected as antigen for this immonosensor. An electrochemical impedance spectroscopy was used as label free detection technique for immune conjugation. The gold nanorods modified electrode layer showed better analytical response than gold nano particles. The linear calibration range was observed between 10 pg/ml and 1 ng/ml with limit of detection 5 pg/ml (S/N = 3). Up to four successive assay cycles with retentive sensitivity were achieved for the immunosensors regenerated with 0.2 M glycine–HCl buffer, pH 2.8. The performance of this immnosensor were compared with immuoblotting techniques.
- Published
- 2008
19. Polyadenylated RNA during DAPI-arrested regeneration of Tetrahymena cilia
- Author
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Barbara Kludkiewicz and Wanda Krawczyńska
- Subjects
Electrophoresis ,Indoles ,Clinical Biochemistry ,Cell ,Motility ,Biology ,Nucleic Acid Denaturation ,chemistry.chemical_compound ,Tubulin ,medicine ,Animals ,Regeneration ,Cilia ,DAPI ,Molecular Biology ,Tetrahymena pyriformis ,Cilium ,Regeneration (biology) ,Tetrahymena ,RNA ,Cell Biology ,General Medicine ,biology.organism_classification ,Molecular biology ,Cell biology ,medicine.anatomical_structure ,chemistry ,Protein Biosynthesis ,Polyadenylated RNA ,Poly A - Abstract
Regeneration of cilia in Tetrahymena cells treated with 1 micrograms/ml of 4',6-diamidino-2-phenylindole (DAPI) takes place about 30 min later then in untreated controls. Analysis of RNA isolated at 50-th min of reciliation, that is when the control cells-but not DAPI-treated ones-have just restored their motility, revealed that; - 1. Two peaks of polyadenylated RNA were present in DAPI-treated cells as well as in the control ones; - 2. The mobility of the polyadenylated RNA was the same in the two compared cell samples; - 3. In wheat germ cell-free translational system these poly (A+)-RNA probably directed the synthesis of alpha- and beta-tubulin; - 4. The amount of polyadenylated RNA in compared cell samples was different, in DAPI-treated Tetrahymena its amount was estimated at 1.43% vs. 1.89% in control ones.
- Published
- 1990
- Full Text
- View/download PDF
20. Activity of Pichia pastoris alternative cis-prenyltransferase is correlated with proliferation of peroxisomes
- Author
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Ewa Swiezewska, Anna Szkopinska, Marek Skoneczny, and Barbara Kludkiewicz
- Subjects
biology ,Peroxisome Proliferation ,Cell Biology ,General Medicine ,Peroxisome ,biology.organism_classification ,Yeast ,Pichia ,Pichia pastoris ,Oleic acid ,chemistry.chemical_compound ,Dolichol ,Hemiterpenes ,Pentanols ,chemistry ,Biochemistry ,Transferases ,Dolichols ,Peroxisomes ,lipids (amino acids, peptides, and proteins) ,Chromatography, Thin Layer ,Energy source ,Cellular compartment ,Chromatography, High Pressure Liquid - Abstract
We have investigated dolichol synthesis in yeast Pichia pastoris. Growth of these cells on methanol causes peroxisome proliferation and induction of peroxisomal enzymes. Twenty-four hours methanol treatment was sufficient for the appearance of longer-chain dolichols. Less specific oleic acid induction needed 48 h for the synthesis of longer dolichol family with typical one still present. Cells cultured in non-inducing conditions for 48 h did not reveal the presence of additional dolichol family. Peroxisomes purified from oleic acid treated cells synthesize in vitro polyprenols longer by two isoprene residues than those synthesized by microsomal fraction from glucose culture. These observations lead us to suggest that chain length of dolichols synthesized in yeast cell may depend on the carbon and energy source supply which mobilizes metabolic pathways localized to different cellular compartments.
- Published
- 2005
21. Structurally unique recombinant Kazal-type proteinase inhibitor retains activity when terminally extended and glycosylated
- Author
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Barbara Kludkiewicz, Krystyna Grzelak, František Sehnal, Dalibor Kodrík, and Xavier Nirmala
- Subjects
Glycosylation ,Serine Proteinase Inhibitors ,Recombinant Fusion Proteins ,Molecular Sequence Data ,Gene Expression ,Pronase ,Tripeptide ,Biology ,Moths ,Pichia ,Pichia pastoris ,Serine ,chemistry.chemical_compound ,Proteinase 3 ,medicine ,Animals ,Amino Acid Sequence ,Sequence Homology, Amino Acid ,Serine Endopeptidases ,Subtilisin ,Trypsin ,biology.organism_classification ,Molecular biology ,chemistry ,Biochemistry ,Trypsin Inhibitor, Kazal Pancreatic ,Insect Proteins ,Protein Processing, Post-Translational ,Biotechnology ,medicine.drug - Abstract
Recombinant derivatives of the Kazal-type serine proteinase inhibitor GmSPI2 (36 amino acid residues), which is a component of insect silk, were prepared in the expression vector Pichia pastoris. The rhSPI2 had a C-terminal hexahistidine tag attached to the GmSPI2 sequence, rtSPI2 was extended with GluAlaAla at the N-terminus, and rfSPI2 included this N-terminal extension and a C-terminal tail of 22 residues (myc epitope and hexahistidine). A portion of the secreted rfSI2 was O-glycosylated with a trimannosyl or hexamannosyl. The native inhibitor was active slightly on trypsin and highly on subtilisin and proteinase K. The extended C-terminus in rhSPI2 and rfSPI2 enhanced activity on the two latter enzymes and rendered rfSPI2 active on elastase and pronase, but abolished the inhibition of trypsin. The glycosylation of rfSPI2 reduced its inhibitory activity to a level comparable with the native inhibitor. The rtSPI2 with tripeptide extension at the N-terminus and no C-terminal modification was clearly less active than the native inhibitor. None of the tested compounds inhibited alpha-chymotrypsin and the non-serine proteinases.
- Published
- 2004
22. Overexpression of juvenile hormone binding protein in bacteria and Pichia pastoris
- Author
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Krystyna Grzelak, Barbara Kludkiewicz, Larissa I Kolomiets, Janusz Dȩbski, Marian Kochman, Anna Lalik, Michal Dadlez, and Andrzej Ożyhar
- Subjects
Lysis ,Genetic Vectors ,Gene Expression ,Plasma protein binding ,Biology ,Protein Engineering ,Pichia ,Pichia pastoris ,Affinity chromatography ,Gene expression ,Escherichia coli ,Animals ,Binding site ,Molecular mass ,Protein engineering ,biology.organism_classification ,Molecular biology ,Recombinant Proteins ,Juvenile Hormones ,Lepidoptera ,Biochemistry ,Insect Proteins ,Carrier Proteins ,Biotechnology ,Plasmids ,Protein Binding - Abstract
Galleria mellonella juvenile hormone binding protein (JHBP) is a single chain glycoprotein with two disulfide bonds and a molecular mass of 25,880 Da. This report describes the expression of JHBP in bacteria and yeast cells (Pichia pastoris). The expression in bacteria was low and the protein was rapidly degraded upon cell lysis. The expression of His8-tagged rJHBP (His8-rJHBP) in P. pastoris was high and the non-degraded protein was purified to homogeneity with high yield in a one-step immobilized Ni++ affinity chromatography. His8-rJHBP from P. pastoris contains one JH III binding site with KD of 3.7 +/- 1.3x10(-7) M. The results suggest that P. pastoris is the preferred system for expression of His8-rJHBP in non-degraded fully active form.
- Published
- 2003
23. Influence of low temperature on the synthesis of some Galleria mellonella proteins
- Author
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Jakub Godlewski, Barbara Kludkiewicz, Zofia Lassota, Bronislaw Cymborowski, and Krystyna Grzelak
- Subjects
Fat body ,chemistry.chemical_classification ,Ecdysteroid ,Larva ,animal structures ,biology ,Chemistry ,fungi ,biology.organism_classification ,General Biochemistry, Genetics and Molecular Biology ,Galleria mellonella ,Cold Temperature ,Lepidoptera ,chemistry.chemical_compound ,Biochemistry ,Hemolymph ,Protein biosynthesis ,Storage protein ,Animals ,Insect Proteins ,Electrophoresis, Polyacrylamide Gel - Abstract
In developing Galleria mellonella larvae (reared at 30 degrees C) three proteins of 74, 76 and 81/82 kDa were identified. They represent a group of storage proteins (LHP proteins). In Galleria larvae, the development of which is arrested by low temperature (18 degrees C), accumulation of the 74, 76 and 81/82 kDa proteins was detected in the hemolymph. The synthesis of 74 kDa and 76 kDa proteins started after 24 h, and that of about 80 kDa after 96 h following the transfer of larvae from 30 degrees C to 18 degrees C. 20-Hydroxyecdysone inhibited synthesis of the 74 and 76 kDa proteins in larvae exposed to low temperature. The arrest of development of Galleria larvae is associated with the synthesis and accumulation of storage proteins, and ecdysteroids are involved in these processes.
- Published
- 1996
24. The effect of transcription inhibitors on early development of the avian embryo
- Author
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Barbara Kludkiewicz and B. Olszanska
- Subjects
Amanitins ,animal structures ,Transcription, Genetic ,biology ,Embryogenesis ,Embryo ,Gastrula ,Cycloheximide ,Quail ,Molecular biology ,Gastrulation ,chemistry.chemical_compound ,Blastocyst ,medicine.anatomical_structure ,chemistry ,Puromycin ,Transcription (biology) ,biology.animal ,embryonic structures ,medicine ,Animals ,RNA, Messenger ,Developmental Biology - Abstract
The effect of transcription [actinomycin D, 5,6-dichloro-1-beta-D-ribofuranosylbenzimidazole (DRB), alpha-amanitin] and translation inhibitors (cycloheximide, puromycin) on quail embryo development was investigated under in vitro conditions. The gastrulation process seemed to proceed normally in the presence of transcription inhibitors in the medium but the translation inhibitors stopped development and caused complete degeneration of the embryos.
- Published
- 1983
- Full Text
- View/download PDF
25. Low molecular weight silk proteins in Galleria mellonella
- Author
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Pierre Couble, Hicham Alrouz, Krystyna Grzelak, Annie Garel, and Barbara Kludkiewicz
- Subjects
chemistry.chemical_classification ,Gel electrophoresis ,Molecular mass ,fungi ,Fibroin ,Biology ,biology.organism_classification ,Biochemistry ,In vitro ,Galleria mellonella ,SILK ,chemistry ,Insect Science ,Nucleotide ,Molecular Biology ,Bombyx - Abstract
Galleria cocoon proteins have been extracted by different solubilizing agents. Nine protein bands were observed by gel electrophoresis, with molecular weights ranging from 18 to 420 kD. Three silk proteins of 24, 29 and 30 kD were extracted only in the presence of β-mercaptoethanol, suggesting that they are covalently linked by disulfide bonds to the large fibroin. They are likely to be the products of the highly abundant mRNA of the posterior silk gland cells. In vitro translation analysis of this mRNA yielded 24, 29 and 30 kD proteins. Thus, as in Bombyx , the Galleria silk is composed of several subunits, including fibroin and low molecular weight polypeptides. However, the genes coding for fibroin or low molecular weight silk proteins in Bombyx and Galleria do not show nucleotide base homology.
- Published
- 1988
- Full Text
- View/download PDF
26. Transcription and polyadenylation processes during early development of quail embryo
- Author
-
Lassota Z, Barbara Kludkiewicz, and B. Olszanska
- Subjects
Cleavage factor ,Time Factors ,Polyadenylation ,Transcription, Genetic ,Cleavage and polyadenylation specificity factor ,Coturnix ,Biology ,Quail ,RNA, Transfer ,Transcription (biology) ,Animals ,RNA, Messenger ,Molecular Biology ,RNA polymerase II holoenzyme ,RNA ,Gastrula ,RRNA transcription ,Molecular biology ,Cell biology ,Post-transcriptional modification ,Blastocyst ,RNA, Ribosomal ,Electrophoresis, Polyacrylamide Gel ,Poly A ,Developmental Biology - Abstract
Transcription of tRNA and mRNA occurs in quail as early as during cleavage while rRNA transcription becomes measurable during blastulation. The polyadenylated fraction content in newly synthesized RNA amounting to 6 % during cleavage and blastulation decreases to 3 % during gastrulation. Up to 3/4 adenylic residues incorporated into RNA during cleavage are accumulated in the polyadenylated molecules mainly in the form of RNAse-resistant tracts.
- Published
- 1984
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