2,143 results on '"Bampton A"'
Search Results
2. The Basis of Cognitive and Behavioral Dysfunction in Amyotrophic Lateral Sclerosis
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Alexander Bampton, Caroline McHutchison, Kevin Talbot, Michael Benatar, Alexander G. Thompson, and Martin R. Turner
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amyotrophic lateral sclerosis ,behavioral ,C9orf72 ,cognitive ,frontotemporal dementia ,motor neurone disease ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
ABSTRACT Objective To summarize and evaluate evidence pertaining to the clinical, genetic, histopathological, and neuroimaging correlates of cognitive and behavioral dysfunction in amyotrophic lateral sclerosis (ALS). Methodology We comprehensively reviewed the literature on cognitive and behavioral manifestations of ALS, narrating findings from both cross‐sectional and longitudinal studies. We discussed knowledge gaps in the evidence base and key limitations affecting studies to date, before formulating a framework for future research paradigms aimed at investigating clinicopathological correlates of neuropsychological dysfunction in ALS. Results Studies have demonstrated clinical associations with cognitive dysfunction in ALS e.g., bulbar‐onset of symptoms, pathological associations (extramotor TDP‐43 deposition), and imaging associations (frontotemporal involvement). The most common behavioral deficit, apathy, is highly associated with verbal fluency, but longitudinal studies assessing behavioral dysfunction in ALS are comparatively lacking. Conclusion Longitudinal studies have been helpful in identifying several potential correlates of cognitive and behavioral dysfunction but have frequently been confounded by selection bias and inappropriate testing platforms. This review provides a framework for more robust assessment of clinicopathological associations of neuropsychological abnormalities in ALS in the future, advocating for greater utilization of pre‐symptomatic C9orf72 repeat expansion‐carrying cohorts.
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- 2024
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3. An Application of Evidence‐Based Approaches to Engage Young People in the Design of a Global Mental Health Databank
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Augustina Mensa‐Kwao, Lakshmi Neelakantan, Jennifer Velloza, Emily Bampton, Swetha Ranganathan, Refiloe Sibisi, Joshua Bowes, Lilliana Buonasorte, Damian Omari Juma, Manasa Veluvali, Megan Doerr, Tamsin Jane Ford, Christine Suver, Carly Marten, The MindKind Consortium, and Pamela Y. Collins
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adolescent ,global mental health ,health technology ,mental health ,youth engagement ,Medicine (General) ,R5-920 ,Public aspects of medicine ,RA1-1270 - Abstract
ABSTRACT Introduction Engaging youth in mental health research and intervention design has the potential to improve their relevance and effectiveness. Frameworks like Roger Hart's ladder of participation, Shier's pathways to participation and Lundy's voice and influence model aim to balance power between youth and adults. Hart's Ladder, specifically, is underutilized in global mental health research, presenting new opportunities to examine power dynamics across various contexts. Drawing on Hart's ladder, our study examined youth engagement in mental health research across high‐ and middle‐income countries using Internet‐based technologies, evaluating youth involvement in decision‐making and presenting research stages that illustrate these engagements. Methods We conducted a directed content analysis of youth engagement in the study using primary data from project documents, weekly AirTable updates and discussions and interviews with youth and the research consortium. Using Hart's Ladder as a framework, we describe youth engagement along rungs throughout different research stages: cross‐cutting research process, onboarding, formative research and quantitative and qualitative study designs. Results Youth engagement in the MindKind study fluctuated between Rung 4 (‘Assign, but informed’) and Rung 7 (‘Youth initiated and directed’) on Hart's Ladder. Engagement was minimal in the early project stages as project structures and goals were defined, with some youth feeling that their experiences were underutilized and many decisions being adult‐led. Communication challenges and structural constraints, like tight timelines and limited budget, hindered youth engagement in highest ladder rungs. Despite these obstacles, youth engagement increased, particularly in developing recruitment strategies and in shaping data governance models and the qualitative study design. Youth helped refine research tools and protocols, resulting in moderate to substantial engagement in the later research stages. Conclusion Our findings emphasize the value of youth–adult partnerships, which offer promise in amplifying voices and nurturing skills, leadership and inclusiveness of young people. Youth engagement in project decision‐making progressed from lower to higher rungs on Hart's Ladder over time; however, this was not linear. Effective youth engagement requires dynamic strategies, transparent communication and mutual respect, shaping outcomes that authentically reflect diverse perspectives and mental health experiences. Patient or Public Contribution There was substantial patient and public involvement in this study. This paper reports findings on youth engagement conducted with 35 young people from India, South Africa and the United Kingdom, all of whom had lived experience of mental health challenges. Youth engagement in the MindKind study was coordinated and led by three professional youth advisors (PYAs) in these contexts, who were also young people with lived experience of mental health challenges. Each of the three study sites embedded a full‐time, community‐based PYA within their study team to inform all aspects of the research project, including the development of informational materials and the facilitation of Young People's Advisory Group (YPAG) sessions referenced in this paper. Each PYA also consulted with a site‐specific YPAG that met bi‐monthly throughout the project, shaping the formation of study materials and serving as a test group in both the quantitative and qualitative studies. Youth participants in this study also contributed extensively, engaging in data collection and manuscript writing. The following youth advisory panels members (J.B., L.B., D.O.J., M.V.) and all PYAs (E.B., S.R., R.S.) in the MindKind study contributed to the writing of this manuscript and are acknowledged as co‐authors.
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- 2024
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4. Depression influences fatigue in inflammatory bowel disease amongst other factors: a structural modelling approach
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Alex Barnes, Robert V. Bryant, Sutapa Mukherjee, Jane M. Andrews, Peter Bampton, Robert J. Fraser, and Réme Mountifield
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Objectives: Fatigue is common in people with inflammatory bowel disease (IBD) and is associated with IBD activity, sleep disturbance, anxiety and depression. The relative contribution of these factors to fatigue is unclear. This study aimed to investigate the relationship between fatigue and these factors through a novel approach using structural equation modelling. Design: Online questionnaire circulated via three tertiary IBD centres and Crohn’s Colitis Australia. Methods: Fatigue was assessed using the Functional assessment of chronic illness measurement system fatigue subscale. Validated measures of sleep, anxiety, depression and IBD activity were included. Following correlation analyses, a structural equation model was developed for the outcome of the fatigue score. Direct and indirect effects were calculated. Results: There were 630 complete responses to the online questionnaire. The median age of respondents was 41 with the majority female and over half (52%) on biologic medication. Structural equation models for Crohn’s disease and ulcerative colitis demonstrated a good fit. In Crohn’s disease, the relationship between IBD activity and fatigue was mostly mediated indirectly through the influence of IBD activity on sleep, anxiety and primarily depression. Sleep quality mediated the influence of IBD activity and the indirect effects of depression on fatigue, but not anxiety. Unlike in Crohn’s disease, the direct influence of IBD activity on fatigue in ulcerative colitis was non-negligible, although remained of lesser magnitude than the indirect effect of IBD activity on fatigue. Depression was the primary indirect mediator of the influence of IBD activity on fatigue in ulcerative colitis. Conclusion: In Crohn’s disease, IBD activity leads to fatigue through its influence on sleep quality and mental health. The data suggest treatment of clinically significant depression, in both ulcerative colitis and Crohn’s disease, may result in the largest decline in fatigue score compared to other variables. Treatment algorithms for fatigue should consider depression a priority.
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- 2024
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5. Young people's data governance preferences for their mental health data: MindKind Study findings from India, South Africa, and the United Kingdom.
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Sieberts, Solveig K, Marten, Carly, Bampton, Emily, Björling, Elin A, Burn, Anne-Marie, Carey, Emma Grace, Carlson, Sonia, Fernandes, Blossom, Kalha, Jasmine, Lindani, Simthembile, Masomera, Hedwick, Neelakantan, Lakshmi, Pasquale, Lisa, Ranganathan, Swetha, Joy Scanlan, Erin, Shah, Himani, Sibisi, Refiloe, Sumant, Sushmita, Suver, Christine, Thungana, Yanga, Tummalacherla, Meghasyam, Velloza, Jennifer, Collins, Pamela Y, Fazel, Mina, Ford, Tamsin, Freeman, Melvyn, Pathare, Soumitra, Zingela, Zukiswa, MindKind Consortium, and Doerr, Megan
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MindKind Consortium ,Humans ,Mental Health ,Qualitative Research ,Adolescent ,Adult ,South Africa ,India ,Young Adult ,United Kingdom ,Clinical Research ,Clinical Trials and Supportive Activities ,Behavioral and Social Science ,Pediatric ,7.1 Individual care needs ,Management of diseases and conditions ,Mental health ,Good Health and Well Being ,General Science & Technology - Abstract
Mobile devices offer a scalable opportunity to collect longitudinal data that facilitate advances in mental health treatment to address the burden of mental health conditions in young people. Sharing these data with the research community is critical to gaining maximal value from rich data of this nature. However, the highly personal nature of the data necessitates understanding the conditions under which young people are willing to share them. To answer this question, we developed the MindKind Study, a multinational, mixed methods study that solicits young people's preferences for how their data are governed and quantifies potential participants' willingness to join under different conditions. We employed a community-based participatory approach, involving young people as stakeholders and co-researchers. At sites in India, South Africa, and the UK, we enrolled 3575 participants ages 16-24 in the mobile app-mediated quantitative study and 143 participants in the public deliberation-based qualitative study. We found that while youth participants have strong preferences for data governance, these preferences did not translate into (un)willingness to join the smartphone-based study. Participants grappled with the risks and benefits of participation as well as their desire that the "right people" access their data. Throughout the study, we recognized young people's commitment to finding solutions and co-producing research architectures to allow for more open sharing of mental health data to accelerate and derive maximal benefit from research.
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- 2023
6. Identifying construction technologies and environmental connections at the Iron Age IIA settlement of Kh. es-Suwweida, Israel: A microarchaeological study
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Grono, Elle, Edrey, Meir, Morstadt, Bärbel, Bampton, Philip, Zuckerman-Cooper, Roni, Bermatov Paz, Gal, Langgut, Dafna, and Friesem, David E.
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- 2024
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7. Low Incidence of Colorectal Advanced Neoplasia During Surveillance in Individuals with a Family History of Colorectal Cancer
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Barnett, Meghan I., Wassie, Molla M., Cock, Charles, Bampton, Peter A., and Symonds, Erin L.
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- 2023
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8. Surveillance colonoscopy findings in asymptomatic participants over 75 years of age
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Madelyn Agaciak, Molla M Wassie, Kalindra Simpson, Charles Cock, Peter Bampton, Robert Fraser, and Erin L Symonds
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adenoma ,aged ,colonoscopy ,colorectal cancer ,colorectal neoplasm ,surveillance ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background and Aim Surveillance colonoscopy for colorectal cancer (CRC) is generally not recommended beyond 75 years of age. The study determined incidence and predictors of advanced adenoma and CRC in older individuals undergoing surveillance colonoscopy. Methods This was a retrospective cohort study of asymptomatic older participants (≥75 years), enrolled in a South Australian CRC surveillance program who underwent colonoscopy (2015–2020). Clinical records were extracted for demographics, personal or family history of CRC, comorbidities, polypharmacy, and colonoscopy findings. The associations between clinical variables and advanced adenoma or CRC at surveillance were assessed with multivariable Poisson regression analysis. Results Totally 698 surveillance colonoscopies were analyzed from 574 participants aged 75–91 years (55.6% male). The incidence of CRC was 1.6% (11/698), while 37.9% (260/698) of procedures had advanced adenoma detected. Previous CRC (incidence rate ratio [IRR] 5.9, 95% CI 1.5–22.5), age ≥85 years (IRR 5.8, 95% CI 1.6–20.1) and active smoking (IRR 4.9, 95% CI 1.0–24.4) were independently associated with CRC diagnosis, while advanced adenoma at immediately preceding colonoscopy (IRR 1.6, 95% CI 1.3–2.0) and polypharmacy (IRR 1.2, 95% CI 1.0–1.5) were associated with advanced adenoma at surveillance colonoscopy in asymptomatic older participants (≥75 years). Conclusion Advanced neoplasia was found in more than one third of the surveillance procedures completed in this cohort. Continuation of surveillance beyond age 75 yeasrs may be considered in participants who have previous CRC or are active smokers (provided they are fit to undergo colonoscopy). In other cases, such as past advanced adenoma only, the need for ongoing surveillance should be considered alongside participant preference and health status.
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- 2024
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9. CHAPTER 10 Women’s Rights and Roles during the COVID-19 Pandemic
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Al-Shami, Salma, primary, Robbins, Michael, additional, and Bampton, Zach, additional
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- 2023
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10. The Anthropocene Boundary Event : The Present and Beyond
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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11. The Northgrippian : The Time of Transmutation (8200 – 4,200 BP)
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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12. The Meghalayan : Historical Time (4200 BP – Present)
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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13. The Greenlandian : The Big Change (11,700 – 8200 BP)
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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14. Before the Holocene : From 4.6 Billion Years Ago to 11,700 BP
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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15. Magnitude, Frequency, and Change in Earth Systems : Purpose of the Book, Structure, and Foundational Concepts
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Bampton, Matthew, Ford, James D., Series Editor, Desjardins, Sean, Editorial Board Member, Eicken, Hajo, Editorial Board Member, Falardeau-Cote, Marianne, Editorial Board Member, Jackson, Jen, Editorial Board Member, Mustonen, Tero, Editorial Board Member, Nenasheva, Marina, Editorial Board Member, Olsen, Julia, Editorial Board Member, and Bampton, Matthew
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- 2023
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16. Insomnia is common in inflammatory bowel disease (IBD) and is associated with mental health conditions as well as IBD activity
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Alex Barnes, Jane M Andrews, Sutapa Mukherjee, Robert V Bryant, Peter Bampton, Robert J. Fraser, and Réme Mountifield
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inflammatory bowel disease ,sleep initiation and maintenance disorders ,analgesics, opioid ,quality of life ,Medicine ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Background/Aims Insomnia is common in people with chronic medical conditions, such as inflammatory bowel disease (IBD), and is readily treatable through cognitive behavioral therapy for insomnia. This study aimed to describe the associations with insomnia in people with IBD and its relationship to IBD-related disability. Methods An online questionnaire was administered through 3 tertiary IBD centers, social media, and Crohn’s Colitis Australia. The questionnaire included the Insomnia Severity Index (ISI), a validated assessment of insomnia. Measures of anxiety, depression, physical activity, and disability were also included. IBD activity was assessed using validated patient reported scores. A multivariate model was constructed for clinically significant insomnia and ISI scores. Subpopulations of Crohn’s disease and ulcerative colitis were considered. Results In a cohort of 670 respondents the median age was 41 years (range, 32–70 years), with the majority female (78.4%), the majority had Crohn’s disease (57.3%). Increasingly severe disability was associated with worse insomnia score. Clinically significant insomnia was associated with clinically active IBD, abdominal pain, anxiety, and depression, in a multivariate model. In an ulcerative colitis population, Simple Clinical Colitis Activity Index components of general well-being and urgency were associated with worse ISI score in a model including depression and anxiety. In those with Crohn’s disease, the multivariate model included Harvey Bradshaw Index score in addition to depression and anxiety. Conclusions Insomnia is common in people with IBD and is associated with increased disability. Abdominal pain and mental health conditions should prompt consideration for screening for insomnia and referral for cognitive behavioral therapy for insomnia.
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- 2024
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17. SOS for plant stress : the role of Singlet Oxygen Signalling in chloroplast development
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Bampton, Jessica and Terry, Matthew
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Plant seedling de-etiolation occurs when seedlings are transferred from darkness into the light and is characterised by shortening of the hypocotyl, cotyledon expansion, chlorophyll accumulation and assembly of the photosynthetic apparatus. During this process the plastid transitions from a pro-plastid or etioplast into a chloroplast. As most plastid-localised proteins are encoded by the nucleus, communication is required between the chloroplast and the nucleus to regulate this process. Communication from the chloroplast to the nucleus is achieved via retrograde signals, although the identity of these signals is largely unknown. One proposed retrograde signal is singlet oxygen (1O2) which has been shown to inhibit nuclear gene expression. Current methodologies have identified two potential sources of 1O2 that promote this signal, one is in the reaction centre of the grana core and is induced by over-excitation of the photosynthetic apparatus. Another is localised at the grana margin and stimulated by an over-accumulation of tetrapyrroles. This study has investigated the role of 1O2 as an inhibitory retrograde signal when chloroplast development is perturbed following tetrapyrrole accumulation in a far-red (FR) light-dependent manner to induce a 1O2 burst. Transfer of dark (D)-grown etiolated wild-type (WT) seedlings into FR light induces the synthesis of the tetrapyrrole protochlorophyllide (Pchlide) in an unbound state, and upon transfer into white light (WL) a 1O2 burst is initiated which results in an inhibition of photosynthesis and tetrapyrrole biosynthesis-related gene expression. A number of 1O2 signalling pathway components have been identified following alternative methods of 1O2 generation at both the grana core and grana margin, however whether these components belonged to the 1O2 signalling pathway initiated in seedlings following a FR light-induced 1O2 burst was unknown. This work has tested a wide range of these components under FR light-induced 1O2-producing conditions and found that signalling components identified in systems that generate 1O2 in a tetrapyrrole-dependent manner at the grana margin are part of the signalling pathway, whereas signalling components identified in systems that generate a 1O2 burst in the reaction centre of the grana core are not. This study also undertook work to characterise unknown components of the 1O2 signalling pathway initiated following a FR light-induced 1O2 burst. A previous screen isolated the novel 1O2 signalling mutant safe after far-red7 (saf7) which was later identified as a translocation of the outer chloroplast membrane132 (toc132) allele. The TOC complex is responsible for the import of nuclear-encoded chloroplast-localised proteins from the cytosol into the intermembrane space. Following a FR light-induced 1O2 burst both saf7 and toc132-2 displayed a maintenance of photosynthesis and tetrapyrrole biosynthesis-related gene expression, and crucially showed no reduction in Pchlide accumulation compared to WT. When tested the additional protein import mutants plastid protein import1 (ppi1) which is a toc33 allele, and translocation of the inner chloroplast membrane40 (tic40) also showed a maintenance of photosynthesis and tetrapyrrole biosynthesis gene expression, however these mutants displayed a low Pchlide phenotype, and therefore it is unknown if these protein import components are involved in 1O2 signalling. Two 1O2 signalling components known to be involved in 1O2 signalling following a FR light-induced 1O2 burst are the EXECUTER (EX) genes EX1 and EX2. To identify whether TOC132 belonged to the same 1O2 signalling pathway as the EX genes a triple toc132-2 ex1 ex2 mutant was generated and subjected to a FR screen. The toc132-2 ex1 ex2 mutant showed an additive maintenance of photosynthesis and tetrapyrrole biosynthesis gene expression compared to the toc132-2 or ex1 ex2 mutants, however the toc132-2 ex1 ex2 mutant also displayed a low Pchlide phenotype. It could therefore not be determined whether TOC132 and the EX genes are part of the same 1O2 signalling pathway. Collectively this work has identified a clear distinction between 1O2 signalling pathways induced following over-excitation of the photosynthetic apparatus at the grana core, and by the misregulation of tetrapyrrole accumulation at the grana margin. The identification of Toc132 as a novel component of the 1O2 signalling pathway initiated following a FR light-induced 1O2 burst has also implicated the protein import machinery in 1O2 signalling. Furthermore, observations of a low Pchlide accumulation phenotype in the toc132-2 ex1 ex2 mutant may also suggest that the EX and Toc132 signalling components play a role in the function or regulation of the tetrapyrrole biosynthesis pathway.
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- 2022
18. HnRNP K mislocalisation and dysfunction in neurodegenerative disease and ageing
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Bampton, Alexander
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Heterogeneous nuclear ribonucleoproteins (hnRNPs) are a diverse, multi-functional family of RNA-binding proteins. Many such proteins, including TDP-43 and FUS, have been strongly implicated in the pathogenesis of frontotemporal lobar degeneration (FTLD) and amyotrophic lateral sclerosis (ALS). By contrast hnRNP K, the focus of this thesis, has been underexplored in the context of neurodegenerative disease. The first work to be described here involves a comprehensive pathological assessment of hnRNP K protein's neuronal localisation profile in FTLD, ALS and control brain tissue. Following pathological examination, hnRNP K mislocalisation from the nucleus to the cytoplasm within pyramidal neurons of the cortex was identified as a novel neuropathological feature that is associated with both neurodegenerative disease and ageing. Double immunofluorescence was used to confirm these neurons were anatomically distinct from those harbouring the classical TDP-43 or Tau proteinaceous inclusions used in the pathological diagnosis of FTLD. Nuclear loss and mislocalisation of hnRNP K to the cytoplasm was then identified to also occur in two further neuronal cell types within the dentate nucleus of the cerebellum and the CA4 region of the hippocampus. As with pyramidal neurons, similar associations were identified between disease, age and hnRNP K mislocalisation in neurons of the dentate nucleus. Hence, neuronal mislocalisation of hnRNP K across the brain has potentially broad relevance to dementia and the ageing process. Almost all hnRNPs have been found to perform essential homeostatic functions in regulating appropriate target gene splicing activity. Recently, several hnRNPs have been found to have important roles in repressing the inclusion of non-conserved, so-called 'cryptic exons' within mature mRNA transcripts. Inclusion of cryptic exons following TDP-43 nuclear depletion and subsequent reductions in the functional levels of target transcripts and proteins is an emerging pathogenic theme of several neurodegenerative diseases including FTLD and ALS. To recapitulate the functional implications of the hnRNP K nuclear depletion that is observed in brain tissue, a hnRNP K knockdown neuronal model was developed utilising an iPSC-derived CRISPR-interference based platform. RNA-seq analysis revealed that nuclear hnRNP K protein depletion within cortical neurons is associated with the robust activation of several cryptic exon events in mRNA targets of hnRNP K as well as the upregulation of other abnormal splicing events termed 'skiptic exons'. Several of these novel splicing events were validated molecularly using three-primer PCRs. Finally, an in situ hybridisation (ISH) based technology (BaseScope™) platform was optimised to visualise novel cryptic events in post-mortem brain tissue. The platform was used to detect a recently discovered cryptic exon within synaptic gene UNC13A and another in the insulin receptor (INSR) gene, two newly described targets of TDP-43. These events were found specifically in FTLD-TDP or ALS brains, validating it as a specific marker of TDP-43-proteinopathy. A methodological pipeline was also developed to delineate the spatial relationship between cryptic exons and associated TDP-43 pathology. Hence, providing a platform for the future detection, validation and analyses of novel cryptic exons associated with hnRNP K protein depletion in pyramidal neurons.
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- 2022
19. TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A
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Brown, Anna-Leigh, Wilkins, Oscar G, Keuss, Matthew J, Hill, Sarah E, Zanovello, Matteo, Lee, Weaverly Colleen, Bampton, Alexander, Lee, Flora CY, Masino, Laura, Qi, Yue A, Bryce-Smith, Sam, Gatt, Ariana, Hallegger, Martina, Fagegaltier, Delphine, Phatnani, Hemali, Newcombe, Jia, Gustavsson, Emil K, Seddighi, Sahba, Reyes, Joel F, Coon, Steven L, Ramos, Daniel, Schiavo, Giampietro, Fisher, Elizabeth MC, Raj, Towfique, Secrier, Maria, Lashley, Tammaryn, Ule, Jernej, Buratti, Emanuele, Humphrey, Jack, Ward, Michael E, and Fratta, Pietro
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Rare Diseases ,Dementia ,Prevention ,ALS ,Brain Disorders ,Neurodegenerative ,Neurosciences ,Acquired Cognitive Impairment ,Genetics ,Clinical Research ,2.1 Biological and endogenous factors ,Aetiology ,Neurological ,Alternative Splicing ,Amyotrophic Lateral Sclerosis ,Codon ,Nonsense ,DNA-Binding Proteins ,Frontotemporal Dementia ,Humans ,Nerve Tissue Proteins ,Polymorphism ,Single Nucleotide ,TDP-43 Proteinopathies ,NYGC ALS Consortium ,General Science & Technology - Abstract
Variants of UNC13A, a critical gene for synapse function, increase the risk of amyotrophic lateral sclerosis and frontotemporal dementia1-3, two related neurodegenerative diseases defined by mislocalization of the RNA-binding protein TDP-434,5. Here we show that TDP-43 depletion induces robust inclusion of a cryptic exon in UNC13A, resulting in nonsense-mediated decay and loss of UNC13A protein. Two common intronic UNC13A polymorphisms strongly associated with amyotrophic lateral sclerosis and frontotemporal dementia risk overlap with TDP-43 binding sites. These polymorphisms potentiate cryptic exon inclusion, both in cultured cells and in brains and spinal cords from patients with these conditions. Our findings, which demonstrate a genetic link between loss of nuclear TDP-43 function and disease, reveal the mechanism by which UNC13A variants exacerbate the effects of decreased TDP-43 function. They further provide a promising therapeutic target for TDP-43 proteinopathies.
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- 2022
20. Author Correction: TDP-43 loss and ALS-risk SNPs drive mis-splicing and depletion of UNC13A
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Brown, Anna-Leigh, Wilkins, Oscar G., Keuss, Matthew J., Hill, Sarah E., Zanovello, Matteo, Lee, Weaverly Colleen, Bampton, Alexander, Lee, Flora C. Y., Masino, Laura, Qi, Yue A., Bryce-Smith, Sam, Gatt, Ariana, Hallegger, Martina, Fagegaltier, Delphine, Phatnani, Hemali, Newcombe, Jia, Gustavsson, Emil K., Seddighi, Sahba, Reyes, Joel F., Coon, Steven L., Ramos, Daniel, Schiavo, Giampietro, Fisher, Elizabeth M. C., Raj, Towfique, Secrier, Maria, Lashley, Tammaryn, Ule, Jernej, Buratti, Emanuele, Humphrey, Jack, Ward, Michael E., and Fratta, Pietro
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- 2024
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21. The Diagnostic Performance of Fecal Immunochemical Tests for Detecting Advanced Neoplasia at Surveillance Colonoscopy
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Berwald, Grace, Young, Graeme P., Cock, Charles, Bampton, Peter, Fraser, Robert, and Symonds, Erin L.
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- 2024
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22. Improving Concordance Between Clinicians With Australian Guidelines for Bowel Cancer Prevention Using a Digital Application: Randomized Controlled Crossover Study
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Tsai-Wing Ow, Olga Sukocheva, Peter Bampton, Guruparan Iyngkaran, Christopher K Rayner, and Edmund Tse
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
BackgroundAustralia’s bowel cancer prevention guidelines, following a recent revision, are among the most complex in the world. Detailed decision tables outline screening or surveillance recommendations for 230 case scenarios alongside cessation recommendations for older patients. While these guidelines can help better allocate limited colonoscopy resources, their increasing complexity may limit their adoption and potential benefits. Therefore, tools to support clinicians in navigating these guidelines could be essential for national bowel cancer prevention efforts. Digital applications (DAs) represent a potentially inexpensive and scalable solution but are yet to be tested for this purpose. ObjectiveThis study aims to assess whether a DA could increase clinician adherence to Australia’s new colorectal cancer screening and surveillance guidelines and determine whether improved usability correlates with greater conformance to guidelines. MethodsAs part of a randomized controlled crossover study, we created a clinical vignette quiz to evaluate the efficacy of a DA in comparison with the standard resource (SR) for making screening and surveillance decisions. Briefings were provided to study participants, which were tailored to their level of familiarity with the guidelines. We measured the adherence of clinicians according to their number of guideline-concordant responses to the scenarios in the quiz using either the DA or the SR. The maximum score was 18, with higher scores indicating improved adherence. We also tested the DA’s usability using the System Usability Scale. ResultsOf 117 participants, 80 were included in the final analysis. Using the SR, the adherence of participants was rated a median (IQR) score of 10 (7.75-13) out of 18. The participants’ adherence improved by 40% (relative risk 1.4, P
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- 2024
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23. FIT for purpose: study protocol for a randomized controlled trial to personalize surveillance colonoscopy for individuals at elevated risk of colorectal cancer
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Winter, Jean M., Cornthwaite, Kathryn J., Young, Graeme P., Wilson, Carlene, Chen, Gang, Woodman, Richard, Coats, Michelle, Fraser, Robert, Cock, Charles, Bampton, Peter, and Symonds, Erin L.
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- 2023
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24. Conductive organic electrodes for flexible electronic devices
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Chakraborty, Amrita, Herrera, Daniel, Fallen, Payton, Hall, Daniel, Bampton, Nicholas, Olivero, Thomas, and Orlowski, Marius
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- 2023
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25. Proactive Metabolite Testing in Patients on Thiopurine May Yield Long-Term Clinical Benefits in Inflammatory Bowel Disease
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Barnes, Alex, Ooi, Soong-Yuan J., Lynch, Kate D., Parthasarathy, Nina, Bishara, Maria, Gounder, Michael, Grafton, Rachel, Leach, Peta, Bampton, Peter, Sechi, Alexandra, Ng, Watson, Connor, Susan, van Langenberg, Daniel, Mountifield, Réme, and Andrews, Jane M.
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- 2023
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26. HLA-DP on Epithelial Cells Enables Tissue Damage by NKp44+ Natural Killer Cells in Ulcerative Colitis
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Akar, Alaa, Flemming, Cornelius, Felix, Flomm, Flosbach, Markus, Jäger, Julia, Jeromin, Niklas, Jung, Johannes, Ohms, Mareike, Reinshagen, Konrad, Rische, Johann, Sagebiel, Adrian, Sandfort, Deborah, Steinert, Fenja, Tomuschat, Christian, Wesche, Jasmin, Shifteh Abedian, Abraham, Clara, Achkar, Jean-Paul, Ahmad, Tariq, Alberts, Rudi, Alizadeh, Behrooz, Amininejad, Leila, Ananthakrishnan, Ashwin N., Andersen, Vibeke, Anderson, Carl A., Andrews, Jane M., Annese, Vito, Aumais, Guy, Baidoo, Leonard, Baldassano, Robert N., Bampton, Peter A., Barclay, Murray, Barrett, Jeffrey C., Bethge, Johannes, Bewshea, Claire, Bis, Joshua C., Bitton, Alain, BK, Thelma, Boucher, Gabrielle, Brain, Oliver, Brand, Stephan, Brant, Steven R., Cheon, Jae Hee, Chew, Angela, Cho, Judy H., Cleynen, Isabelle, Cohain, Ariella, Cooney, Rachel, Croft, Anthony, Daly, Mark J., D'Amato, Mauro, Danese, Silvio, Daryani, Naser Ebrahim, Datta, Lisa Wu, Degenhardt, Frauke, Denapiene, Goda, Denson, Lee A., Devaney, Kathy L., Dewit, Olivier, D'Inca, Renata, Drummond, Hazel E., Dubinsky, Marla, Duerr, Richard H., Edwards, Cathryn, Ellinghaus, David, Ellul, Pierre, Esaki, Motohiro, Essers, Jonah, Ferguson, Lynnette R., Festen, Eleonora A., Fleshner, Philip, Florin, Tim, Franchimont, Denis, Franke, Andre, Fuyuno, Yuta, Gearry, Richard, Georges, Michel, Gieger, Christian, Glas, Jürgen, Goyette, Philippe, Green, Todd, Griffiths, Anne M., Guthery, Stephen L., Hakonarson, Hakon, Halfvarson, Jonas, Hanigan, Katherine, Haritunians, Talin, Hart, Ailsa, Hawkey, Chris, Hayward, Nicholas K., Hedl, Matija, Henderson, Paul, Hold, Georgina L., Hong, Myhunghee, Hu, Xinli, Huang, Hailiang, Hugot, Jean-Pierre, Hui, Ken Y., Imielinski, Marcin, Jazayeri, Omid, Jonaitis, Laimas, Jostins, Luke, Juyal, Garima, Chandra Juyal, Ramesh, Kalla, Rahul, Karlsen, Tom H., Kennedy, Nicholas A., Khan, Mohammed Azam, Kim, Won Ho, Kitazono, Takanari, Kiudelis, Gediminas, Kubo, Michiaki, Kugathasan, Subra, Kupcinskas, Limas, Lamb, Christopher A., de Lange, Katrina M., Latiano, Anna, Laukens, Debby, Lawrance, Ian C., Lee, James C., Lees, Charlie W., Leja, Marcis, Lewis, Nina, Van Limbergen, Johan, Lionetti, Paolo, Liu, Jimmy Z., Louis, Edouard, Luo, Yang, Mahy, Gillian, Malekzadeh, Masoud Mohammad, Malekzadeh, Reza, Mansfield, John, Marriott, Suzie, Massey, Dunecan, Mathew, Christopher G., Matsui, Toshiyuki, McGovern, Dermot P.B., van der Meulen, Andrea, Midha, Vandana, Milgrom, Raquel, Mirzaei, Samaneh, Mitrovic, Mitja, Montgomery, Grant W., Mowat, Craig, Müller, Christoph, Newman, William G., Ng, Aylwin, Ng, Siew C., Evelyn Ng, Sok Meng, Nikolaus, Susanna, Ning, Kaida, Nöthen, Markus, Oikonomou, Ioannis, Okou, David, Orchard, Timothy R., Palmieri, Orazio, Parkes, Miles, Phillips, Anne, Ponsioen, Cyriel Y., Potocnik, Urõs, Poustchi, Hossein, Prescott, Natalie J., Proctor, Deborah D., Radford-Smith, Graham, Rahier, Jean- Francois, Regueiro, Miguel, Reinisch, Walter, Rieder, Florian, Rioux, John D., Roberts, Rebecca, Rogler, Gerhard, Russell, Richard K., Sanderson, Jeremy D., Sans, Miquel, Satsangi, Jack, Schadt, Eric E., Scharl, Michael, Schembri, John, Schreiber, Stefan, Schumm, L. Philip, Scott, Regan, Seielstad, Mark, Shah, Tejas, Sharma, Yashoda, Silverberg, Mark S., Simmons, Alison, Simms, Lisa A., Singh, Abhey, Skieceviciene, Jurgita, van Sommeren, Suzanne, Song, Kyuyoung, Sood, Ajit, Spain, Sarah L., Steinhart, A. Hillary, Stempak, Joanne M., Stronati, Laura, Sung, Joseph J.Y., Targan, Stephan R., Taylor, Kirstin M., Theatre, Emilie, Torkvist, Leif, Torres, Esther A., Tremelling, Mark, Uhlig, Holm H., Umeno, Junji, Vahedi, Homayon, Vasiliauskas, Eric, Velde, Anje ter, Ventham, Nicholas T., Vermeire, Severine, Verspaget, Hein W., De Vos, Martine, Walters, Thomas, Wang, Kai, Wang, Ming-Hsi, Weersma, Rinse K., Wei, Zhi, Whiteman, David, Wijmenga, Cisca, Wilson, David C., Winkelmann, Juliane, Wong, Sunny H., Xavier, Ramnik J., Yamazaki, Keiko, Yang, Suk-Kyun, Ye, Byong Duk, Zeissig, Sebastian, Zhang, Bin, Zhang, Clarence K., Zhang, Hu, Zhang, Wei, Zhao, Hongyu, Zhao, Zhen Z., Baumdick, Martin E., Niehrs, Annika, Schwerk, Maria, Hinrichs, Ole, Jordan-Paiz, Ana, Padoan, Benedetta, Wegner, Lucy H.M., Schloer, Sebastian, Zecher, Britta F., Malsy, Jakob, Joshi, Vinita R., Illig, Christin, Schröder-Schwarz, Jennifer, Möller, Kimberly J., Martin, Maureen P., Yuki, Yuko, Ozawa, Mikki, Sauter, Jürgen, Schmidt, Alexander H., Perez, Daniel, Giannou, Anastasios D., Carrington, Mary, Davis, Randall S., Schumacher, Udo, Sauter, Guido, Huber, Samuel, Puelles, Victor G., Melling, Nathaniel, Altfeld, Marcus, and Bunders, Madeleine J.
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- 2023
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27. Multiple Negative Fecal Immunochemical Tests Reduce Risk of Advanced Neoplasia in a Colonoscopy Surveillance Program
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Wassie, Molla M., Young, Graeme P., Winter, Jean M., Cock, Charles, Bampton, Peter, Rahman, Mahadya, Heddle, Richard, Fraser, Robert, Meng, Rosie, and Symonds, Erin L.
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- 2023
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28. Examining the influence of inflammatory bowel disease medications on sleep quality
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Alex Barnes, Paul Spizzo, Peter Bampton, Jane M Andrews, Robert J Fraser, Sutapa Mukherjee, and Réme Mountifield
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inflammatory bowel disease ,methotrexate ,obesity ,opioids ,sleep ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background and Aim Inflammatory bowel disease (IBD) can disrupt sleep, leading to poor sleep quality. This may in part be due to the symptoms of IBD and the influence of pro‐inflammatory cytokines on sleep. This study aimed to investigate the potential influence of IBD medications on sleep quality. Methods An online survey of adults with IBD was conducted, which included measures of sleep quality, IBD activity, anxiety, depression, and physical activity. Logistic regression was used to investigate possible associations between IBD medications (corticosteroids, immunomodulators, biologics, aminosalicyate) and outcome of poor sleep. A generalized linear model was built for outcome of sleep quality score. Results There were 544 participants included in the final analysis, median age of 42, and 61% with Crohn's disease. Increased odds of poor sleep were seen in those taking opioids, medications for anxiety or depression, corticosteroids, vitamin D, methotrexate, and infliximab. A multivariate model was built incorporating demographic and IBD variables with opioids present in the final model and associated with increased odds of poor sleep. This was in addition to medications for sleep, depression, anxiety, IBD activity, and body weight. In a multivariate generalized linear model, opioids and methotrexate were associated with worse sleep quality scores. Conclusions Opioids were associated with increased odds of poor sleep independent of other factors. This provides further support for avoiding these medications in people with IBD. Infliximab was associated with increased body weight and consequently increased odds of poor sleep.
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- 2023
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29. Systematic review and meta‐analysis of sleep quality in inactive inflammatory bowel disease
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Alex Barnes, Réme Mountifield, Justin Baker, Paul Spizzo, Peter Bampton, and Sutapa Mukherjee
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Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Poor sleep in people with inflammatory bowel disease (IBD) has been demonstrated to be prevalent and has been associated with disease activity. This meta‐analysis aimed to assess the prevalence of poor sleep in inactive IBD and in controls by considering cohort and cross‐sectional studies. Electronic databases were searched for publications from inception to 1 November 2021. Poor sleep and IBD activity were defined according to self‐reported subjective sleep measures. A random effects model was used to determine the standardized mean difference between poor sleep in inactive IBD and healthy controls. Publication bias was assessed by funnel plot and Egger's test. Five hundred and nineteen studies were screened with 9 studies included in the meta‐analysis incorporating a total of 729 people with IBD and 508 controls. A random effects model showed a standardized mean difference with poor sleep being more frequent in those with inactive IBD than controls with moderate effect size (Hedge's g 0.41, CI [0.22–0.59]) and no significant heterogeneity. There was no publication bias evident. Poor sleep is more common in individuals with inactive IBD than healthy controls. Further studies should consider potential mechanisms to explain this result, including the role of subclinical inflammation and psychosocial factors that may influence sleep quality in people with IBD.
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- 2022
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30. First CERN Cold Masses for the HL-LHC Interaction Regions
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Prin, Herve, primary, Axensalva, Jerome, additional, Bampton, Tavis, additional, Bourcey, Nicolas, additional, Devred, Arnaud, additional, Ramos, Delio Duarte, additional, Troitino, Jose Ferradas, additional, Bermudez, Susana Izquierdo, additional, Milanese, Attilio, additional, Pentella, Mariano, additional, Petrone, Carlo, additional, Principe, Rosario, additional, Rogacki, Piotr, additional, Straarup, Simon, additional, and Todesco, Ezio, additional
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- 2024
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31. Evidencing the Impact of Web-Based Coproduction With Youth on Mental Health Research: Qualitative Findings From the MindKind Study
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Blossom Fernandes, Lakshmi Neelakantan, Himani Shah, Sushmita Sumant, Pamela Y Collins, Jennifer Velloza, Emily Bampton, Swetha Ranganathan, Refiloe Sibisi, Toiba Bashir, Joshua Bowes, Esther Larisa David, Harsimar Kaur, Umairah Malik, Issy Shannon, Suvlaxmi Gurumayum, Anne-Marie Burn, Solveig K Sieberts, and Mina Fazel
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Public aspects of medicine ,RA1-1270 - Abstract
BackgroundPublic involvement in research is a growing phenomenon as well as a condition of research funding, and it is often referred to as coproduction. Coproduction involves stakeholder contributions at every stage of research, but different processes exist. However, the impact of coproduction on research is not well understood. Web-based young people’s advisory groups (YPAGs) were established as part of the MindKind study at 3 sites (India, South Africa, and the United Kingdom) to coproduce the wider research study. Each group site, led by a professional youth advisor, conducted all youth coproduction activities collaboratively with other research staff. ObjectiveThis study aimed to evaluate the impact of youth coproduction in the MindKind study. MethodsTo measure the impact of web-based youth coproduction on all stakeholders, the following methods were used: analysis of project documents, capturing the views of stakeholders using the Most Significant Change technique, and impact frameworks to assess the impact of youth coproduction on specific stakeholder outcomes. Data were analyzed in collaboration with researchers, advisors, and YPAG members to explore the impact of youth coproduction on research. ResultsThe impact was recorded on 5 levels. First, at the paradigmatic level, a novel method of conducting research allowed for a widely diverse group of YPAG representations, influencing study priorities, conceptualization, and design. Second, at the infrastructural level, the YPAG and youth advisors meaningfully contributed to the dissemination of materials; infrastructural constraints of undertaking coproduction were also identified. Third, at the organizational level, coproduction necessitated implementing new communication practices, such as a web-based shared platform. This meant that materials were easily accessible to the whole team and communication streams remained consistent. Fourth, at the group level, authentic relationships developed between the YPAG members, advisors, and the rest of the team, facilitated by regular web-based contact. Finally, at the individual level, participants reported enhanced insights into mental well-being and appreciation for the opportunity to engage in research. ConclusionsThis study revealed several factors that shape the creation of web-based coproduction, with clear positive outcomes for advisors, YPAG members, researchers, and other project staff. However, several challenges of coproduced research were also encountered in multiple contexts and amid pressing timelines. For systematic reporting of the impact of youth coproduction, we propose that monitoring, evaluation, and learning systems be designed and implemented early.
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- 2023
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32. The Psychological Impacts of Taking Physiotherapy Teaching Online in 2020: What Did We Learn?
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Bampton, Julie, Tang, Clarice Y., McKay, Marnee J., Paul, Serene S., Allen, Natalie E., Darwell, Christina, Frawley, Jessica, and Dennis, Sarah
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- 2023
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33. The Basis of Cognitive and Behavioral Dysfunction in Amyotrophic Lateral Sclerosis.
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Bampton, Alexander, McHutchison, Caroline, Talbot, Kevin, Benatar, Michael, Thompson, Alexander G., and Turner, Martin R.
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- 2024
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34. The Epidemiology and Burden of Childhood Chronic Pancreatitis in South Australia
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Bampton, Tristan J., Couper, Richard, Khurana, Sanjeev, Moore, David, Brown, Alex, Drogemuller, Chris, Wu, Denghao, Chen, John, Coates, P.T., and Palmer, Lyle J.
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- 2022
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35. Surveillance colonoscopy findings in asymptomatic participants over 75 years of age
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Agaciak, Madelyn, primary, Wassie, Molla M, additional, Simpson, Kalindra, additional, Cock, Charles, additional, Bampton, Peter, additional, Fraser, Robert, additional, and Symonds, Erin L, additional
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- 2024
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36. Young people’s data governance preferences for their mental health data: MindKind Study findings from India, South Africa, and the United Kingdom
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Solveig K. Sieberts, Carly Marten, Emily Bampton, Elin A. Björling, Anne-Marie Burn, Emma Grace Carey, Sonia Carlson, Blossom Fernandes, Jasmine Kalha, Simthembile Lindani, Hedwick Masomera, Lakshmi Neelakantan, Lisa Pasquale, Swetha Ranganathan, Erin Joy Scanlan, Himani Shah, Refiloe Sibisi, Sushmita Sumant, Christine Suver, Yanga Thungana, Meghasyam Tummalacherla, Jennifer Velloza, Pamela Y. Collins, Mina Fazel, Tamsin Ford, Melvyn Freeman, Soumitra Pathare, Zukiswa Zingela, and Megan Doerr
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Medicine ,Science - Abstract
Mobile devices offer a scalable opportunity to collect longitudinal data that facilitate advances in mental health treatment to address the burden of mental health conditions in young people. Sharing these data with the research community is critical to gaining maximal value from rich data of this nature. However, the highly personal nature of the data necessitates understanding the conditions under which young people are willing to share them. To answer this question, we developed the MindKind Study, a multinational, mixed methods study that solicits young people’s preferences for how their data are governed and quantifies potential participants’ willingness to join under different conditions. We employed a community-based participatory approach, involving young people as stakeholders and co-researchers. At sites in India, South Africa, and the UK, we enrolled 3575 participants ages 16–24 in the mobile app-mediated quantitative study and 143 participants in the public deliberation-based qualitative study. We found that while youth participants have strong preferences for data governance, these preferences did not translate into (un)willingness to join the smartphone-based study. Participants grappled with the risks and benefits of participation as well as their desire that the “right people” access their data. Throughout the study, we recognized young people’s commitment to finding solutions and co-producing research architectures to allow for more open sharing of mental health data to accelerate and derive maximal benefit from research.
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- 2023
37. Phase Ib open-label, multicenter study of pixatimod, an activator of TLR9, in combination with nivolumab in subjects with microsatellite-stable metastatic colorectal cancer, metastatic pancreatic ductal adenocarcinoma and other solid tumors
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Matthew Burge, David Goldstein, Andrew Haydon, Nick Pavlakis, Charlotte Lemech, Edward Hammond, Darryn Bampton, Keith Dredge, Michael P Brown, Andrew Clouston, Nigel J Waterhouse, Amanda C Stanley, Lucie Leveque-El Mouttie, and Grace M Chojnowski
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Background Pixatimod is a unique activator of the Toll-like Receptor 9 pathway. This phase I trial evaluated safety, efficacy and pharmacodynamics of pixatimod and PD-1 inhibitor nivolumab in immunologically cold cancers.Methods 3+3 dose escalation with microsatellite stable metastatic colorectal cancer (MSS mCRC) and metastatic pancreatic ductal adenocarcinoma (mPDAC) expansion cohorts. Participants received pixatimod once weekly as a 1-hour intravenous infusion plus nivolumab every 2 weeks. Objectives included assessment of safety, antitumor activity, pharmacodynamics, and pharmacokinetic profile.Results Fifty-eight participants started treatment. The maximum tolerated dose of pixatimod was 25 mg in combination with 240 mg nivolumab, which was used in the expansion phases of the study. Twenty-one grade 3–5 treatment-related adverse events were reported in 12 participants (21%); one participant receiving 50 mg pixatimod/nivolumab had a treatment-related grade 5 AE. The grade 3/4 rate in the MSS mCRC cohort (n=33) was 12%. There were no responders in the mPDAC cohort (n=18). In the MSS mCRC cohort, 25 participants were evaluable (initial postbaseline assessment scans >6 weeks); of these, three participants had confirmed partial responses (PR) and eight had stable disease (SD) for at least 9 weeks. Clinical benefit (PR+SD) was associated with lower Pan-Immune-Inflammation Value and plasma IL-6 but increased IP-10 and IP-10/IL-8 ratio. In an MSS mCRC participant with PR as best response, increased infiltration of T cells, dendritic cells, and to a lesser extent NK cells, were evident 5 weeks post-treatment.Conclusions Pixatimod is well tolerated at 25 mg in combination with nivolumab. The efficacy signal and pharmacodynamic changes in MSS mCRC warrants further investigation.Trial registration number NCT05061017.
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- 2023
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38. COVID-19: a shock to the system-reflections from practice by safeguarding adults board managers
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Lloyd-Smith, Walter, Bampton, Lindsey, Caldwell, Julia, Eader, Anita, Jones, Helen, and Turner, Steven
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- 2021
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39. HnRNP K mislocalisation is a novel protein pathology of frontotemporal lobar degeneration and ageing and leads to cryptic splicing
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Bampton, Alexander, Gatt, Ariana, Humphrey, Jack, Cappelli, Sara, Bhattacharya, Dipanjan, Foti, Sandrine, Brown, Anna-Leigh, Asi, Yasmine, Low, Yi Hua, Foiani, Marco, Raj, Towfique, Buratti, Emanuele, Fratta, Pietro, and Lashley, Tammaryn
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- 2021
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40. People with Parkinson's disease are more willing to do additional exercise if the exercise program has specific attributes: a discrete choice experiment
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Paul, Serene S, Canning, Colleen G, Löfgren, Niklas, Sherrington, Cathie, Lee, Deborah C, Bampton, Julie, and Howard, Kirsten
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- 2021
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41. An Application of Evidence‐Based Approaches to Engage Young People in the Design of a Global Mental Health Databank.
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Mensa‐Kwao, Augustina, Neelakantan, Lakshmi, Velloza, Jennifer, Bampton, Emily, Ranganathan, Swetha, Sibisi, Refiloe, Bowes, Joshua, Buonasorte, Lilliana, Juma, Damian Omari, Veluvali, Manasa, Doerr, Megan, Ford, Tamsin Jane, Suver, Christine, Marten, Carly, Adeyemi, Faith Oluwasemilore, Areán, Patricia A., Björling, Elin A., Bradic, Ljubomir, Burn, Anne‐Marie, and Carey, Emma Grace
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DATABASES ,MIDDLE-income countries ,MENTAL health ,RESEARCH funding ,QUALITATIVE research ,CONTENT analysis ,DESCRIPTIVE statistics ,INTERNET ,DECISION making in clinical medicine ,WORLD health ,MEDICAL research ,PATIENT participation ,LOW-income countries - Abstract
Introduction: Engaging youth in mental health research and intervention design has the potential to improve their relevance and effectiveness. Frameworks like Roger Hart's ladder of participation, Shier's pathways to participation and Lundy's voice and influence model aim to balance power between youth and adults. Hart's Ladder, specifically, is underutilized in global mental health research, presenting new opportunities to examine power dynamics across various contexts. Drawing on Hart's ladder, our study examined youth engagement in mental health research across high‐ and middle‐income countries using Internet‐based technologies, evaluating youth involvement in decision‐making and presenting research stages that illustrate these engagements. Methods: We conducted a directed content analysis of youth engagement in the study using primary data from project documents, weekly AirTable updates and discussions and interviews with youth and the research consortium. Using Hart's Ladder as a framework, we describe youth engagement along rungs throughout different research stages: cross‐cutting research process, onboarding, formative research and quantitative and qualitative study designs. Results: Youth engagement in the MindKind study fluctuated between Rung 4 ('Assign, but informed') and Rung 7 ('Youth initiated and directed') on Hart's Ladder. Engagement was minimal in the early project stages as project structures and goals were defined, with some youth feeling that their experiences were underutilized and many decisions being adult‐led. Communication challenges and structural constraints, like tight timelines and limited budget, hindered youth engagement in highest ladder rungs. Despite these obstacles, youth engagement increased, particularly in developing recruitment strategies and in shaping data governance models and the qualitative study design. Youth helped refine research tools and protocols, resulting in moderate to substantial engagement in the later research stages. Conclusion: Our findings emphasize the value of youth–adult partnerships, which offer promise in amplifying voices and nurturing skills, leadership and inclusiveness of young people. Youth engagement in project decision‐making progressed from lower to higher rungs on Hart's Ladder over time; however, this was not linear. Effective youth engagement requires dynamic strategies, transparent communication and mutual respect, shaping outcomes that authentically reflect diverse perspectives and mental health experiences. Patient or Public Contribution: There was substantial patient and public involvement in this study. This paper reports findings on youth engagement conducted with 35 young people from India, South Africa and the United Kingdom, all of whom had lived experience of mental health challenges. Youth engagement in the MindKind study was coordinated and led by three professional youth advisors (PYAs) in these contexts, who were also young people with lived experience of mental health challenges. Each of the three study sites embedded a full‐time, community‐based PYA within their study team to inform all aspects of the research project, including the development of informational materials and the facilitation of Young People's Advisory Group (YPAG) sessions referenced in this paper. Each PYA also consulted with a site‐specific YPAG that met bi‐monthly throughout the project, shaping the formation of study materials and serving as a test group in both the quantitative and qualitative studies. Youth participants in this study also contributed extensively, engaging in data collection and manuscript writing. The following youth advisory panels members (J.B., L.B., D.O.J., M.V.) and all PYAs (E.B., S.R., R.S.) in the MindKind study contributed to the writing of this manuscript and are acknowledged as co‐authors. [ABSTRACT FROM AUTHOR]
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- 2024
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42. Depression influences fatigue in inflammatory bowel disease amongst other factors: a structural modelling approach.
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Barnes, Alex, Bryant, Robert V., Mukherjee, Sutapa, Andrews, Jane M., Bampton, Peter, Fraser, Robert J., and Mountifield, Réme
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CROHN'S disease ,INFLAMMATORY bowel diseases ,SLEEP quality ,ULCERATIVE colitis ,FATIGUE (Physiology) - Abstract
Objectives: Fatigue is common in people with inflammatory bowel disease (IBD) and is associated with IBD activity, sleep disturbance, anxiety and depression. The relative contribution of these factors to fatigue is unclear. This study aimed to investigate the relationship between fatigue and these factors through a novel approach using structural equation modelling. Design: Online questionnaire circulated via three tertiary IBD centres and Crohn's Colitis Australia. Methods: Fatigue was assessed using the Functional assessment of chronic illness measurement system fatigue subscale. Validated measures of sleep, anxiety, depression and IBD activity were included. Following correlation analyses, a structural equation model was developed for the outcome of the fatigue score. Direct and indirect effects were calculated. Results: There were 630 complete responses to the online questionnaire. The median age of respondents was 41 with the majority female and over half (52%) on biologic medication. Structural equation models for Crohn's disease and ulcerative colitis demonstrated a good fit. In Crohn's disease, the relationship between IBD activity and fatigue was mostly mediated indirectly through the influence of IBD activity on sleep, anxiety and primarily depression. Sleep quality mediated the influence of IBD activity and the indirect effects of depression on fatigue, but not anxiety. Unlike in Crohn's disease, the direct influence of IBD activity on fatigue in ulcerative colitis was non-negligible, although remained of lesser magnitude than the indirect effect of IBD activity on fatigue. Depression was the primary indirect mediator of the influence of IBD activity on fatigue in ulcerative colitis. Conclusion: In Crohn's disease, IBD activity leads to fatigue through its influence on sleep quality and mental health. The data suggest treatment of clinically significant depression, in both ulcerative colitis and Crohn's disease, may result in the largest decline in fatigue score compared to other variables. Treatment algorithms for fatigue should consider depression a priority. Plain language summary: Depression influences fatigue in inflammatory bowel disease Fatigue is common in people with inflammatory bowel disease. Studies investigating the causes of fatigue in people with inflammatory bowel disease have consistently identified depression, anxiety, sleep quality and IBD activity as factors associated with fatigue. People with inflammatory bowel disease were asked about their fatigue levels, sleep quality, depression, anxiety and inflammatory bowel disease activity. These responses were used to generate a model to explain the interaction between these factors and how they influence fatigue. The contribution of each of these factors to fatigue was then determined. Depression had the largest overall contribution. The influence of inflammatory bowel disease activity on fatigue occurred mostly through its impact on other factors such as depression and sleep quality. Consideration should be given to screening for and treating depression in people with inflammatory bowel disease and fatigue. [ABSTRACT FROM AUTHOR]
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- 2024
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43. The impact of coronavirus disease 2019 on surveillance colonoscopies in South Australia
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Molla M Wassie, Madelyn Agaciak, Charles Cock, Peter Bampton, Graeme P Young, and Erin L Symonds
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colorectal neoplasms ,coronavirus disease 2019 ,surveillance ,Diseases of the digestive system. Gastroenterology ,RC799-869 - Abstract
Abstract Background and Aim The coronavirus disease 2019 (COVID‐19) global pandemic has affected elective procedures, including colonoscopy, worldwide. Delayed colorectal cancer surveillance may increase cancer risk. This study aimed to determine the impact of COVID‐19 on the proportion of surveillance colonoscopies booked and completed and the extent to which that surveillance was delayed. Methods This was a retrospective analysis of colonoscopy data during the 3 months (April–June 2020) when clinical services were most affected by COVID‐19 in South Australia compared to the same period in 2019. Data on colonoscopies and responses to surveillance recall letters were reviewed to determine the numbers and proportions of colonoscopies that were delayed. Results During 2020, the total number of colonoscopies decreased by 51.1% (n = 569) compared to 2019 (n = 1164). In 2019, 45.5% (n = 530) of colonoscopies were completed for surveillance, but this proportion decreased to 32.0% (n = 182) during 2020, an overall decrease in the number of surveillance colonoscopies of 65.6%. Of surveillance colonoscopies that were due in 2020, 46.1% (134/291) were delayed >6 months, a significant increase compared to 2019 (19.3%; 59/306, P
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- 2021
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44. Improving Concordance Between Clinicians With Australian Guidelines for Bowel Cancer Prevention Using a Digital Application: Randomized Controlled Crossover Study
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Ow, Tsai-Wing, primary, Sukocheva, Olga, additional, Bampton, Peter, additional, Iyngkaran, Guruparan, additional, Rayner, Christopher K, additional, and Tse, Edmund, additional
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- 2024
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45. Circulating Dipeptidyl Peptidase Activity Is a Potential Biomarker for Inflammatory Bowel Disease
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Jaenisch, Simone E., Abbott, Catherine A., Gorrell, Mark D., Bampton, Peter, Butler, Ross N., and Yazbeck, Roger
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- 2022
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46. The Hyperlocal Geography of Climate Change Impacts: Long-Term Perspectives on Storm Survivability from the Shetland Islands
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Bampton, Matthew, Kelley, A. R., and Kelley, J. T.
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- 2019
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47. The role of hnRNPs in frontotemporal dementia and amyotrophic lateral sclerosis
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Bampton, Alexander, Gittings, Lauren M., Fratta, Pietro, Lashley, Tammaryn, and Gatt, Ariana
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- 2020
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48. Level of UV Exposure, Skin Type, and Age Are More Important than Thiopurine Use for Keratinocyte Carcinoma Development in IBD Patients
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Wu, Yang, Ghaly, Simon, Kerr, Stephen, Jackson, Bryce, Hanigan, Katherine, Martins, Deborah, Krishnaprasad, Krupa, Mountifield, Reme E., Whiteman, David C., Bampton, Peter A., Gearry, Richard B., Radford-Smith, Graham L., and Lawrance, Ian C.
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- 2020
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49. PG545 enhances anti-cancer activity of chemotherapy in ovarian models and increases surrogate biomarkers such as VEGF in preclinical and clinical plasma samples
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Winterhoff, Boris, Freyer, Luisa, Hammond, Edward, Giri, Shailendra, Mondal, Susmita, Roy, Debarshi, Teoman, Attila, Mullany, Sally A, Hoffmann, Robert, von Bismarck, Antonia, Chien, Jeremy, Block, Matthew S, Millward, Michael, Bampton, Darryn, Dredge, Keith, and Shridhar, Viji
- Subjects
Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Orphan Drug ,Rare Diseases ,Women's Health ,Cancer ,Ovarian Cancer ,5.1 Pharmaceuticals ,6.1 Pharmaceuticals ,Animals ,Antineoplastic Combined Chemotherapy Protocols ,Biomarkers ,Tumor ,Cisplatin ,Drug Synergism ,Female ,Humans ,Mice ,Mice ,Inbred C57BL ,Mice ,SCID ,Neoplasms ,Ovarian Neoplasms ,Paclitaxel ,Saponins ,Tumor Cells ,Cultured ,Up-Regulation ,Vascular Endothelial Growth Factor A ,Xenograft Model Antitumor Assays ,PG545 ,Ovarian cancer ,Tumour microenvironment ,Heparanase ,VEGF ,HB-EGF ,Public Health and Health Services ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundDespite the utility of antiangiogenic drugs in ovarian cancer, efficacy remains limited due to resistance linked to alternate angiogenic pathways and metastasis. Therefore, we investigated PG545, an anti-angiogenic and anti-metastatic agent which is currently in Phase I clinical trials, using preclinical models of ovarian cancer.MethodsPG545's anti-cancer activity was investigated in vitro and in vivo as a single agent, and in combination with paclitaxel, cisplatin or carboplatin using various ovarian cancer cell lines and tumour models.ResultsPG545, alone, or in combination with chemotherapeutics, inhibited proliferation of ovarian cancer cells, demonstrating synergy with paclitaxel in A2780 cells. PG545 inhibited growth factor-mediated cell migration and reduced HB-EGF-induced phosphorylation of ERK, AKT and EGFR in vitro and significantly reduced tumour burden which was enhanced when combined with paclitaxel in an A2780 model or carboplatin in a SKOV-3 model. Moreover, in the immunocompetent ID8 model, PG545 also significantly reduced ascites in vivo. In the A2780 maintenance model, PG545 initiated with, and following paclitaxel and cisplatin treatment, significantly improved overall survival. PG545 increased plasma VEGF levels (and other targets) in preclinical models and in a small cohort of advanced cancer patients which might represent a potential biomarker of response.ConclusionOur results support clinical testing of PG545, particularly in combination with paclitaxel, as a novel therapeutic strategy for ovarian cancer.
- Published
- 2015
50. 341 A phase Ib expansion cohort of pixatimod plus nivolumab in previously treated, microsatellite stable metastatic colorectal cancer (MSS mCRC)
- Author
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Matthew Burge, David Goldstein, Andrew Haydon, Nick Pavlakis, Michael Brown, Charlotte Lemech, Edward Hammond, Darryn Bampton, Keith Dredge, Nigel Waterhouse, Amanda Stanley, Lucie Leveque-ElMouttie, Grace Chojnowski, and Andrew Clouson
- Subjects
Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2021
- Full Text
- View/download PDF
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