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We compared four approaches to assess phenology in a short-rotation coppice culture with 12 poplar (Populus) genotypes. The four approaches quantified phenology at different spatial scales and with different temporal resolutions: (i) visual observations of bud phenology; (ii) measurements of leaf area index; (iii) webcam images; and (iv) satellite images. For validation purposes we applied the four approaches during two years: the year preceding a coppice event and the year following the coppice event. The delayed spring greenup and the faster canopy development in the year after coppicing (as compared to the year before coppicing) were similarly quantified by the four approaches. The four approaches detected very similar seasonal changes in phenology, although they had different spatial scales and a different temporal resolution. The onset of autumn senescence after coppicing remained the same as in the year before coppicing according to the bud set observations, but it started earlier according to the webcam images, and later according to the MODIS images. In comparison to the year before coppicing, the growing season - in terms of leaf area duration - was shorter in the year after coppicing, while the leaf area index was higher.

Resolving the spatial and temporal dynamics of gross primary productivity (GPP) of terrestrial ecosystems across different scales remains a challenge. Remote sensing is regarded as the solution to upscale point observations conducted at the ecosystem level, using the eddy covariance (EC) technique, to the landscape and global levels. In addition to traditional vegetation indices, the photochemical reflectance index (PRI) and the emission of solarinduced chlorophyll fluorescence (SIF), now measurable from space, provide a new range of opportunities to monitor the global carbon cycle using remote sensing. However, the scale mismatch between EC observations and the much coarser satellite-derived data complicate the integration of the two sources of data. The solution is to establish a network of in situ spectral measurements that can act as a bridge between EC measurements and remote-sensing data. In situ spectral measurements have already been conducted for many years at EC sites, but using variable instrumentation, setups, and measurement standards. In Europe in particular, in situ spectral measurements remain highly heterogeneous. The goal of EUROSPEC Cost Action ES0930 was to promote the development of common measuring protocols and new instruments towards establishing best practices and standardization of these measurements. In this review we describe the background and main tradeoffs of in situ spectral measurements, review the main results of EUROSPEC Cost Action, and discuss the future challenges and opportunities of in situ spectral measurements for improved estimation of local and global estimates of GPP over terrestrial ecosystems. [ABSTRACT FROM AUTHOR]

In this paper we explore the skill of hyperspectral reflectance measurements and vegetation indices (VIs) derived from these in estimating carbon dioxide (CO2) fluxes of grasslands. Hyperspectral reflectance data, CO2 fluxes and biophysical parameters were measured at three grassland sites located in European mountain regions using standardized protocols. The relationships between CO2 fluxes, ecophysiological variables, traditional VIs and VIs derived using all two-band combinations of wavelengths available from the whole hyperspectral data space were analysed.We found that VIs derived from hyperspectral data generally explained a large fraction of the variability in the investigated dependent variables but differed in their ability to estimate midday and daily average CO2 fluxes and various derived ecophysiological parameters. Relationships between VIs and CO2 fluxes and ecophysiological parameters were site-specific, likely due to differences in soils, vegetation parameters and environmental conditions. Chlorophyll and water-content-related VIs explained the largest fraction of variability in most of the dependent variables. Band selection based on a combination of a genetic algorithm with random forests (GA-rF) confirmed that it is difficult to select a universal band region suitable across the investigated ecosystems. Our findings have major implications for upscaling terrestrial CO2 fluxes to larger regions and for remote- and proximal-sensing sampling and analysis strategies and call for more cross-site synthesis studies linking ground-based spectral reflectance with ecosystem-scale CO2 fluxes. [ABSTRACT FROM AUTHOR]

Understanding and simulating land biosphere processes happening at the interface between plants and atmosphere are important research activities with operational applications for monitoring and predicting seasonal and inter-annual variability of terrestrial carbon fluxes in connection to a changing climate. This paper reports a comparison between three different Land Surface Models (LSMs), ORCHIDEE, ISBA-A-gs and CTES- SEL used in the Copernicus-Land project precursor, forced with the same meteorological data, and compared with the carbon fluxes measured at 32 Eddy Covariance (EC) flux tower sites in Europe. The results show that the three models have the best performance for forest sites and the poorest performance for cropland and grassland sites. In addition, the three models have difficulties capturing the seasonality of Mediterranean and Sub-tropical biomes, characterized by dry summers. This reduced simulation performance is also reflected in deficiencies in diagnosed Light Use Efficiency (LUE) and Vapour Pressure Deficit (VPD) dependencies compared to observations. Shortcomings in the forcing data may also play a role. These results indicate that more research is needed on the LUE and VPD functions for Mediterranean and Sub-tropical biomes. Finally, this study highlights the importance well representing phenology (i.e. Leaf Area evolution) and management (i.e. rotation/irrigation for cropland, and grazing/harvesting for grassland) to simulate the carbon dynamics of European ecosystems and the importance of ecosystem level observation in models development and validation. [ABSTRACT FROM AUTHOR]

Abstract: Tower CO2 flux measurements from 20 European grasslands in the EUROGRASSFLUX data set covering a wide range of environmental and management conditions were analyzed with respect to their ecophysiological characteristics and CO2 exchange (gross primary production, P g, and ecosystem respiration, R e) using light-response function analysis. Photosynthetically active radiation (Q) and top-soil temperature (T s) were identified as key factors controlling CO2 exchange between grasslands and the atmosphere at the 30-min scale. A nonrectangular hyperbolic light-response model P(Q) and modified nonrectangular hyperbolic light–temperature-response model P(Q, T s) proved to be flexible tools for modeling CO2 exchange in the light. At night, it was not possible to establish robust instantaneous relationships between CO2 evolution rate r n and environmental drivers, though under certain conditions, a significant relationship was found using observation windows 7–14 days wide. Principal light-response parameters—apparent quantum yield, saturated gross photosynthesis, daytime ecosystem respiration, and gross ecological light-use efficiency, ɛ = P g/Q, display patterns of seasonal dynamics which can be formalized and used for modeling. Maximums of these parameters were found in intensively managed grasslands of Atlantic climate. Extensively used semi-natural grasslands of southern and central Europe have much lower production, respiration, and light-use efficiency, while temperate and mountain grasslands of central Europe ranged between these two extremes. Parameters from light–temperature-response analysis of tower data are in agreement with values obtained using closed chambers and free-air CO2 enrichment. Correlations between light-response and productivity parameters provides the possibility to use the easier to measure parameters to estimate the parameters that are more difficult to measure. Gross primary production (P g) of European grasslands ranges from 1700gCO2 m−2 year−1 in dry semi-natural pastures to 6900gCO2 m−2 year−1 in intensively managed Atlantic grasslands. Ecosystem respiration (R e) is in the range 1800< R e <6000gCO2 m−2 year−1. Annual net ecosystem CO2 exchange (NEE) varies from significant net uptake (>2400gCO2 m−2 year−1) to significant release (<−600gCO2 m−2 year−1), though in 15 out of 19 cases grasslands performed as net CO2 sinks. The carbon source was associated with organic rich soils, grazing, and heat stress. Comparison of P g, R e, and NEE for tower sites with the same characteristics from previously published papers obtained with other methods did not reveal significant discrepancies. Preliminary results indicate relationships of grassland P g and R e to macroclimatic factors (precipitation and temperature), but these relationships cannot be reduced to simple monofactorial models. [Copyright &y& Elsevier]

Background: Tyrosine kinase inhibitors (TKIs) targeting fms-like tyrosine kinase 3 (Flt3) such as quizartinib were specifically designed for acute myeloid leukemia treatment, but also multi-targeting TKIs applied to solid tumor patients inhibit Flt3. Flt3 is expressed in the heart and its activation is cytoprotective in myocardial infarction (MI) in mice., Objectives: We sought to test whether Flt3-targeting TKI treatment aggravates cardiac injury after MI., Methods and Results: Compared to vehicle, quizartinib (10 mg/kg/day, gavage) did not alter cardiac dimensions or function in healthy mice after four weeks of therapy. Pretreated mice were randomly assigned to MI or sham surgery while receiving quizartinib or vehicle for one more week. Quizartinib did not aggravate the decline in ejection fraction, but significantly enhanced ventricular dilatation one week after infarction. In addition, apoptotic cell death was significantly increased in the myocardium of quizartinib-treated compared to vehicle-treated mice. In vitro, quizartinib dose-dependently decreased cell viability in neonatal rat ventricular myocytes and in H9c2 cells, and increased apoptosis as assessed in the latter. Together with H 2 O 2, quizartinib potentiated the phosphorylation of the pro-apoptotic mitogen activated protein kinase p38 and augmented H 2 O 2 -induced cell death and apoptosis beyond additive degree. Pretreatment with a p38 inhibitor abolished apoptosis under quizartinib and H 2 O 2 ., Conclusion: Quizartinib potentiates apoptosis and promotes maladaptive remodeling after MI in mice at least in part via a p38-dependent mechanism. These findings are consistent with the multi-hit hypothesis of cardiotoxicity and make cardiac monitoring in patients with ischemic heart disease under Flt3- or multi-targeting TKIs advisable., (© 2023. The Author(s).)

Aims: Microvascular inflammation plays an important role in the pathogenesis of diastolic dysfunction (DD) and metabolic heart disease. NOX1 is expressed in vascular and immune cells and has been implicated in the vascular pathology of metabolic disease. However, its contribution to metabolic heart disease is less understood., Methods and Results: NOX1-deficient mice (KO) and male wild-type (WT) littermates were fed a high-fat high-sucrose diet (HFHS) and injected streptozotocin (75 mg/kg i.p.) or control diet (CTD) and sodium citrate. Despite similar weight gain and increase in fasting blood glucose and insulin, only WT-HFHS but not KO-HFHS mice developed concentric cardiac hypertrophy and elevated left ventricular filling pressure. This was associated with increased endothelial adhesion molecule expression, accumulation of Mac-2-, IL-1β-, and NLRP3-positive cells and nitrosative stress in WT-HFHS but not KO-HFHS hearts. Nox1 mRNA was solidly expressed in CD45+ immune cells isolated from healthy mouse hearts but was negligible in cardiac CD31+ endothelial cells. However, in vitro, Nox1 expression increased in response to lipopolysaccharide (LPS) in endothelial cells and contributed to LPS-induced upregulation of Icam-1. Nox1 was also upregulated in mouse bone marrow-derived macrophages in response to LPS. In peripheral monocytes from age- and sex-matched symptomatic patients with and without DD, NOX1 was significantly higher in patients with DD compared to those without DD., Conclusions: NOX1 mediates endothelial activation and contributes to myocardial inflammation and remodelling in metabolic disease in mice. Given its high expression in monocytes of humans with DD, NOX1 may represent a potential target to mitigate heart disease associated with DD., Competing Interests: Conflict of interest: none declared., (© The Author(s) 2021. Published by Oxford University Press on behalf of the European Society of Cardiology.)

European mountain grasslands are increasingly affected by land-use changes and climate, which have been suggested to exert important controls on grassland carbon (C) and nitrogen (N) pools. However, so far there has been no synthetic study on whether and how land-use changes and climate interactively affect the partitioning of these pools amongst the different grassland compartments. We analyzed the partitioning of C and N pools of 36 European mountain grasslands differing in land-use and climate with respect to above- and belowground phytomass, litter and topsoil (top 23 cm). We found that a reduction of management intensity and the abandonment of hay meadows and pastures increased above-ground phytomass, root mass and litter as well as their respective C and N pools, concurrently decreasing the fractional contribution of the topsoil to the total organic carbon pool. These changes were strongly driven by the cessation of cutting and grazing, a shift in plant functional groups and a related reduction in litter quality. Across all grasslands studied, variation in the impact of land management on the topsoil N pool and C/N-ratio were mainly explained by soil clay content combined with pH. Across the grasslands, below-ground phytomass as well as phytomass- and litter C concentrations were inversely related to the mean annual temperature; furthermore, C/N-ratios of phytomass and litter increased with decreasing mean annual precipitation. Within the topsoil compartment, C concentrations decreased from colder to warmer sites, and increased with increasing precipitation. Climate generally influenced effects of land use on C and N pools mainly through mean annual temperature and less through mean annual precipitation. We conclude that site-specific conditions need to be considered for understanding the effects of land use and of current and future climate changes on grassland C and N pools., Competing Interests: Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2022. Published by Elsevier B.V.)

Aridity and salinity limit sustainable biomass production and agricultural practices in desert areas. The capability of halophytes plantation with wind deposits containing around 10% gypsum was evaluated for reclamation of saline soil and its effect on the production of Sorghum bicolar L., in an arid area. Two substance treatments at concentrations of 25 and 50 ton ha -1 gypsum and wind deposits at levels of 85 and 170 ton ha -1 were applied. Biological treatments were applied using halophyte plantation as a pioneer species. Sorghum was cultivated for all substance treatments and the production of sorghum was determined for the different treatments. Results indicated that the method leads to a reduction of salinity from 139 to <4 dS m -1 and SAR declined from 129.6 to 6.2 after a period of 15 months. The performance of wind deposits used in these experiments was higher than pure gypsum to reclaim saline soils. Maximum production of sorghum has been obtained by the treatment of 85 ton ha -1 wind deposit. Results indicated land reclamation and biomass production of forage seems possible when using wind deposit in the study area and therefore the wind deposit can effectively be used for reclamation of saline soil and plant production in arid environments.

Nucleic acid sensing through pattern recognition receptors is critical for immune recognition of microbial infections. Microbial DNA is frequently methylated at the N 6 position of adenines (m6A), a modification that is rare in mammalian host DNA. We show here how that m6A methylation of 5'-GATC-3' motifs augments the immunogenicity of synthetic double-stranded (ds)DNA in murine macrophages and dendritic cells. Transfection with m6A-methylated DNA increased the expression of the activation markers CD69 and CD86, and of Ifnβ , iNos and Cxcl10 mRNA. Similar to unmethylated cytosolic dsDNA, recognition of m6A DNA occurs independently of TLR and RIG-I signalling, but requires the two key mediators of cytosolic DNA sensing, STING and cGAS. Intriguingly, the response to m6A DNA is sequence-specific. m6A is immunostimulatory in some motifs, but immunosuppressive in others, a feature that is conserved between mouse and human macrophages. In conclusion, epigenetic alterations of DNA depend on the context of the sequence and are differentially perceived by innate cells, a feature that could potentially be used for the design of immune-modulating therapeutics.

Information on the onset of leaf senescence in temperate deciduous trees and comparisons on its assessment methods are limited, hampering our understanding of autumn dynamics. We compare five field proxies, five remote sensing proxies and two data analysis approaches to assess leaf senescence onset at one main beech stand, two stands of oak and birch, and three ancillary stands of the same species in Belgium during 2017 and 2018. Across species and sites, onset of leaf senescence was not significantly different for the field proxies based on Chl leaf content and canopy coloration, except for an advanced canopy coloration during the extremely dry and warm 2018. Two remote sensing indices provided results fully consistent with the field data. A significant lag emerged between leaf senescence onset and leaf fall, and when a threshold of 50% change in the seasonal variable under study (e.g. Chl content) was used to derive the leaf senescence onset. Our results provide unprecedented information on the quality and applicability of different proxies to assess leaf senescence onset in temperate deciduous trees. In addition, a sound base is offered to select the most suited methods for the different disciplines that need this type of data., (© 2019 The Authors. New Phytologist © 2019 New Phytologist Trust.)