27 results on '"Bacik I"'
Search Results
2. The Emergence of an EU Criminal Process
- Author
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Bacik, I., Heffernan, L., Walsh, Dermot P. J., Bacik, I., Heffernan, L., and Walsh, Dermot P. J.
- Published
- 2012
3. The European Arrest Warrant and the Development of a European Criminal Space
- Author
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Bacik, I., Heffernan, L., Walsh, Dermot P. J., Bacik, I., Heffernan, L., and Walsh, Dermot P. J.
- Published
- 2011
4. The European Arrest Warrant in Ireland: Surrendering our Standards to a European Criminal Law Area
- Author
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Bacik, I., Heffernan, L., Walsh, Dermot P. J., Bacik, I., Heffernan, L., and Walsh, Dermot P. J.
- Published
- 2009
5. Cytotoxic T cells specific for a single peptide on the M2 protein of respiratory syncytial virus are the sole mediators of resistance induced by immunization with M2 encoded by a recombinant vaccinia virus
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Kulkarni, A B, primary, Collins, P L, additional, Bacik, I, additional, Yewdell, J W, additional, Bennink, J R, additional, Crowe, J E, additional, and Murphy, B R, additional
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- 1995
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6. Influenza and vaccinia viruses expressing malaria CD8+ T and B cell epitopes. Comparison of their immunogenicity and capacity to induce protective immunity.
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Rodrigues, M, primary, Li, S, additional, Murata, K, additional, Rodriguez, D, additional, Rodriguez, J R, additional, Bacik, I, additional, Bennink, J R, additional, Yewdell, J W, additional, Garcia-Sastre, A, additional, and Nussenzweig, R S, additional
- Published
- 1994
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7. MHC-encoded proteasome subunits LMP2 and LMP7 are not required for efficient antigen presentation.
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Yewdell, J, primary, Lapham, C, additional, Bacik, I, additional, Spies, T, additional, and Bennink, J, additional
- Published
- 1994
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8. Influenza and vaccinia viruses expressing malaria CD8+ T and B cell epitopes: Comparison of their immunogenicity and capacity to induce protective immunity
- Author
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Rodrigues, M., Li, S., Murata, K., Rodriguez, D., Rodriguez, J. R., Bacik, I., Bennink, J. R., Yewdell, J. W., Garcia-Sastre, A., Nussenzweig, R. S., MARIANO ESTEBAN, Palese, P., and Zavala, F.
9. INFLUENZA AND VACCINIA VIRUSES EXPRESSING MALARIA CD8(+) T-CELL AND B-CELL EPITOPES - COMPARISON OF THEIR IMMUNOGENICITY AND CAPACITY TO INDUCE PROTECTIVE IMMUNITY
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Rodrigues, M., Li, Sq, Murata, K., Rodriguez, D., Rodriguez, Jr, Bacik, I., Bennink, Jr, Yewdell, Jw, Garciasastre, A., Nussenzweig, Rs, Esteban, M., Palese, P., and Zavala, F.
10. Antigen processing in vivo and the elicitation of primary CTL responses
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Nicholas P. Restifo, Bacik, I., Irvine, K. R., Yewdell, J. W., Mccabe, B. J., Anderson, R. W., Eisenlohr, L. C., Rosenberg, S. A., and Bennink, J. R.
- Subjects
Immunology ,Immunology and Allergy - Abstract
CD8+ T lymphocytes (TCD8+) play an important role in cellular immune responses. TCD8+ recognize MHC class I molecules complexed to peptides of 8 to 10 residues derived largely from cytosolic proteins. Proteins are generally thought to be fragmented in the cytoplasm and delivered to nascent class I molecules in the endoplasmic reticulum (ER) by a peptide transporter encoded by the MHC. To explore the extent to which TCD8+ induction in vivo is limited by proteolysis or peptide transport into the ER, mice were immunized with recombinant vaccinia viruses containing mini-genes encoding antigenic peptides (bypassing the need for proteolysis), or these peptides with a NH2-terminal ER insertion sequence (bypassing the requirements for both proteolysis and transport). Additionally, mice were immunized with recombinant vaccinia viruses encoding rapidly degraded fragments of proteins. We report that limitations in induction of TCD8+ responses vary among Ags: for some, full length proteins are as immunogenic as other forms tested; for others, maximal responses are induced by peptides or by peptides targeted to the ER. Most importantly, in every circumstance examined, targeting peptides to the ER never diminished, and in some cases greatly enhanced, the TCD8+ immune response and provide an important alternative strategy in the design of live viral or naked DNA vaccines for the treatment of cancer and infectious diseases.
11. Manipulating the antigen processing machinery and tumor immunology
- Author
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Restifo, N.P., Yewdell, J.W., Bennink, J.R., Bacik, I., Kawakami, Y., Esquivel, F., and Rosenberg, S.A.
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Tumors -- Physiological aspects ,Antigens -- Physiological aspects ,Health ,Science and technology - Abstract
AUTHORS: N.P. Restifo, J.W. Yewdell, J.R. Bennink, I. Bacik, Y. Kawakami, F. Esquivel and S.A. Rosenberg. U.S. National Cancer Institute and U.S. National Institute of Allergy and Infectious Diseases, Bethesda, [...]
- Published
- 1993
12. Associations Between Forced and "Persuaded" First Intercourse and Later Health Outcomes in Women.
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McCarthy-Jones S, Bulfin A, Nixon E, O'Keane V, Bacik I, and McElvaney R
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- Adolescent, Adult, Cross-Sectional Studies, Female, Humans, Interpersonal Relations, Ireland, Outcome Assessment, Health Care, Coercion, Rape psychology, Sexual Behavior psychology
- Abstract
The effects of nonconsensual first experiences of sexual intercourse in women are understudied. This was investigated in 3,875 adult women of whom 6.7% reported "persuaded" first-sex and 0.8% reported forced first-sex. Compared with willing first-sex, both forced and "persuaded" first-sex occurred earlier, involved a greater age difference between partners, and were associated with more lifetime sexual partners and some measures of worse psychological well-being. In addition, "persuaded" first-sex was associated with worse general physical health. "Persuaded" first-sex and its relation to health need to be better understood, along with how culture influences women's experiences of first-sex.
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- 2019
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13. Candidate cell substrates, vaccine production, and transmissible spongiform encephalopathies.
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Piccardo P, Cervenakova L, Vasilyeva I, Yakovleva O, Bacik I, Cervenak J, McKenzie C, Kurillova L, Gregori L, Pomeroy K, and Asher DM
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- Animals, Biological Assay, CHO Cells, Cattle, Cell Culture Techniques, Cell Line, Chlorocebus aethiops, Communicable Diseases, Emerging transmission, Creutzfeldt-Jakob Syndrome transmission, Cricetinae, Cricetulus, Disease Models, Animal, Dogs, Encephalopathy, Bovine Spongiform transmission, HEK293 Cells, Humans, Mice, Mice, Transgenic, Prions isolation & purification, Prions pathogenicity, Saimiri, Scrapie transmission, Vero Cells, Drug Contamination, Prion Diseases transmission, Vaccines isolation & purification
- Abstract
Transmissible spongiform encephalopathy (TSE) agents have contaminated human tissue-derived medical products, human blood components, and animal vaccines. The objective of this study was to determine the potential susceptibility to infection of 5 cell lines used or proposed for manufacture of biological products, as well as other lines. Cell lines were exposed to the infectious agents of sporadic and variant Creutzfeldt-Jakob disease and bovine spongiform encephalopathy (BSE). Exposed cultures were tested for TSE-associated prion protein (PrP(TSE)) and TSE infectivity by assay in rodents and nonhuman primates. No PrP(TSE) or infectivity has been detected in any exposed cell line under study so far. Animals inoculated with BSE brain homogenate developed typical spongiform encephalopathy. In contrast, animals inoculated with cells exposed to the BSE agent remained asymptomatic. All cell lines we studied resisted infection with 3 TSE agents, including the BSE agent.
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- 2011
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14. Recycling CD1d1 molecules present endogenous antigens processed in an endocytic compartment to NKT cells.
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Roberts TJ, Sriram V, Spence PM, Gui M, Hayakawa K, Bacik I, Bennink JR, Yewdell JW, and Brutkiewicz RR
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- Animals, Antigens, CD1d, Cell Line, Glycosylphosphatidylinositols physiology, Killer Cells, Natural immunology, Mice, Primaquine pharmacology, Rats, Antigen Presentation, Antigens, CD1 physiology, Endocytosis, Killer Cells, Natural metabolism
- Abstract
Mouse CD1d1 molecules present endogenous glycolipids to NKT cells. Although glycolipid presentation requires CD1d1 transport through the endocytic pathway, the processing requirements for such endogenous Ag presentation by CD1d1 molecules are undefined. We examined CD1d1 Ag presentation to NKT cells by disrupting endocytic trafficking and function in cells expressing normal and mutated CD1d1 expressed by recombinant vaccinia viruses. Consistent with previous studies, we found that preventing CD1d1 localization to endosomes by altering its cytoplasmic targeting sequences abrogated recognition by Valpha14Jalpha281(+) NKT cells without affecting recognition by Valpha14(-) NKT cells. Increasing the pH of acidic compartments by incubating cells with chloroquine or bafilomycin A1 blocked CD1d1 recognition by Valpha14(+) (but not Valpha14(-)) NKT cells without reducing levels of cell surface CD1d1. Similar results were obtained with primaquine, which interferes with the recycling of cell surface glycoproteins. These results suggest that the loading of a subset of glycolipid ligands onto CD1d1 molecules entails the delivery of cell surface CD1d1 molecules and an acidic environment in the endocytic pathway.
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- 2002
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15. A novel influenza A virus mitochondrial protein that induces cell death.
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Chen W, Calvo PA, Malide D, Gibbs J, Schubert U, Bacik I, Basta S, O'Neill R, Schickli J, Palese P, Henklein P, Bennink JR, and Yewdell JW
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- Amino Acid Sequence, Animals, Apoptosis, Base Sequence, Conserved Sequence, Cysteine Endopeptidases metabolism, Half-Life, HeLa Cells, Humans, Mitochondrial Proteins genetics, Molecular Sequence Data, Multienzyme Complexes metabolism, Oligopeptides genetics, Oligopeptides pharmacology, Open Reading Frames, Peptide Fragments genetics, Peptide Fragments pharmacology, Proteasome Endopeptidase Complex, Protein Biosynthesis, Protein Transport, Species Specificity, Viral Proteins genetics, Influenza A virus pathogenicity, Mitochondrial Proteins metabolism, Viral Proteins metabolism
- Abstract
While searching for alternative reading-frame peptides encoded by influenza A virus that are recognized by CD8+ T cells, we found an abundant immunogenic peptide encoded by the +1 reading frame of PB1. This peptide derives from a novel conserved 87-residue protein, PB1-F2, which has several unusual features compared with other influenza gene products in addition to its mode of translation. These include its absence from some animal (particularly swine) influenza virus isolates, variable expression in individual infected cells, rapid proteasome-dependent degradation and mitochondrial localization. Exposure of cells to a synthetic version of PB1-F2 induces apoptosis, and influenza viruses with targeted mutations that interfere with PB1-F2 expression induce less extensive apoptosis in human monocytic cells than those with intact PB1-F2. We propose that PB1-F2 functions to kill host immune cells responding to influenza virus infection.
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- 2001
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16. Human cytomegalovirus protein US2 interferes with the expression of human HFE, a nonclassical class I major histocompatibility complex molecule that regulates iron homeostasis.
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Ben-Arieh SV, Zimerman B, Smorodinsky NI, Yaacubovicz M, Schechter C, Bacik I, Gibbs J, Bennink JR, Yewdell JW, Coligan JE, Firat H, Lemonnier F, and Ehrlich R
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- Amino Acid Sequence, HeLa Cells, Hemochromatosis Protein, Homeostasis, Humans, Molecular Sequence Data, RNA-Binding Proteins physiology, Receptors, Transferrin analysis, Recombinant Proteins metabolism, Vaccinia virus genetics, Viral Proteins physiology, Cytomegalovirus physiology, HLA Antigens metabolism, Histocompatibility Antigens Class I metabolism, Iron metabolism, Membrane Proteins, Viral Envelope Proteins physiology
- Abstract
HFE is a nonclassical class I major histocompatibility complex (MHC) molecule that is mutated in the autosomal recessive iron overload disease hereditary hemochromatosis. There is evidence linking HFE with reduced iron uptake by the transferrin receptor (TfR). Using a panel of HFE and TfR monoclonal antibodies to examine human HFE (hHFE)-expressing cell lines, we demonstrate the expression of stable and fully glycosylated TfR-free and TfR-associated hHFE/beta2m complexes. We show that both the stability and assembly of hHFE complexes can be modified by the human cytomegalovirus (HCMV) viral protein US2, known to interfere with the expression of classical class I MHC molecules. HCMV US2, but not US11, targets HFE molecules for degradation by the proteasome. Whether this interference with the regulation of iron metabolism by a viral protein is a means of potentiating viral replication remains to be determined. The reduced expression of classical class I MHC and HFE complexes provides the virus with an efficient tool for altering cellular metabolism and escaping certain immune responses.
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- 2001
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17. Multiple antigen-specific processing pathways for activating naive CD8+ T cells in vivo.
- Author
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Norbury CC, Princiotta MF, Bacik I, Brutkiewicz RR, Wood P, Elliott T, Bennink JR, and Yewdell JW
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- ATP Binding Cassette Transporter, Subfamily B, Member 2, ATP-Binding Cassette Transporters administration & dosage, ATP-Binding Cassette Transporters biosynthesis, ATP-Binding Cassette Transporters genetics, ATP-Binding Cassette Transporters physiology, Adoptive Transfer, Animals, Antigens, Viral administration & dosage, Antigens, Viral genetics, Antigens, Viral immunology, Antigens, Viral metabolism, CD8-Positive T-Lymphocytes transplantation, Cells, Cultured, Cytotoxicity, Immunologic genetics, Cytotoxicity, Immunologic immunology, Egg Proteins administration & dosage, Egg Proteins genetics, Egg Proteins immunology, Female, Humans, Injections, Intravenous, Interphase immunology, Lymphocyte Transfusion, Male, Mice, Mice, Inbred C57BL, Mice, Knockout, Mice, Transgenic, Ovalbumin administration & dosage, Ovalbumin genetics, Ovalbumin immunology, Peptide Fragments administration & dosage, Peptide Fragments genetics, Peptide Fragments immunology, Receptors, Antigen, T-Cell genetics, Receptors, Antigen, T-Cell immunology, Recombinant Proteins administration & dosage, Recombinant Proteins immunology, Recombinant Proteins metabolism, Recombination, Genetic immunology, Vaccinia virus genetics, Vaccinia virus immunology, Viral Core Proteins administration & dosage, Viral Core Proteins genetics, Viral Core Proteins immunology, Antigen Presentation, CD8-Positive T-Lymphocytes immunology, CD8-Positive T-Lymphocytes metabolism, Epitopes, T-Lymphocyte immunology, Lymphocyte Activation
- Abstract
Current knowledge of the processing of viral Ags into MHC class I-associated ligands is based almost completely on in vitro studies using nonprofessional APCs (pAPCs). This is two steps removed from real immune responses to pathogens and vaccines, in which pAPCs activate naive CD8(+) T cells in vivo. Rational vaccine design requires answers to numerous questions surrounding the function of pAPCs in vivo, including their abilities to process and present peptides derived from endogenous and exogenous viral Ags. In the present study, we characterize the in vivo dependence of Ag presentation on the expression of TAP by testing the immunogenicity of model Ags synthesized by recombinant vaccinia viruses in TAP1(-/-) mice. We show that the efficiency of TAP-independent presentation in vitro correlates with TAP-independent activation of naive T cells in vivo and provide the first in vivo evidence for proteolytic processing of antigenic peptides in the secretory pathway. There was, however, a clear exception to this correlation; although the presentation of the minimal SIINFEKL determinant from chicken egg OVA in vitro was strictly TAP dependent, it was presented in a TAP-independent manner in vivo. In vivo presentation of the same peptide from a fusion protein retained its TAP dependence. These results show that determinant-specific processing pathways exist in vivo for the generation of antiviral T cell responses. We present additional findings that point to cross-priming as the likely mechanism for these protein-specific differences.
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- 2001
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18. Generating MHC class I ligands from viral gene products.
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Yewdell J, Antón LC, Bacik I, Schubert U, Snyder HL, and Bennink JR
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- Animals, Antigen Presentation, CD8-Positive T-Lymphocytes immunology, Cysteine Endopeptidases metabolism, Cytosol immunology, Cytosol metabolism, Endopeptidases metabolism, Endoplasmic Reticulum immunology, Endoplasmic Reticulum metabolism, Humans, Ligands, Models, Biological, Multienzyme Complexes metabolism, Peptides genetics, Peptides immunology, Peptides metabolism, Proteasome Endopeptidase Complex, Protein Processing, Post-Translational, Ubiquitins metabolism, Antigens, Viral genetics, Antigens, Viral metabolism, Histocompatibility Antigens Class I metabolism
- Abstract
MHC class I molecules function to present peptides comprised of eight to 11 residues to CD8+ T lymphocytes. Here we review the efforts of our laboratory to understand how cells generate such peptides from viral gene products. We particularly focus on the nature of substrates acted on by cytosolic proteases, the contribution of proteasomes and non-proteasomal proteases to peptide generation, the involvement of ubiquitination in peptide generation, the intracellular localization of proteasome generation of antigenic peptides, and the trimming of peptides in the endoplasmic reticulum.
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- 1999
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19. Dislocation of type I membrane proteins from the ER to the cytosol is sensitive to changes in redox potential.
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Tortorella D, Story CM, Huppa JB, Wiertz EJ, Jones TR, Bacik I, Bennink JR, Yewdell JW, and Ploegh HL
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- Cell Line, Cytomegalovirus genetics, Cytomegalovirus immunology, Cytomegalovirus metabolism, Cytosol immunology, Cytosol virology, Diamide pharmacology, Endoplasmic Reticulum immunology, Endoplasmic Reticulum virology, Ethylmaleimide pharmacology, Glycosylation, Histocompatibility Antigens Class I chemistry, Humans, Membrane Proteins chemistry, Oxidation-Reduction, Protein Folding, RNA-Binding Proteins genetics, RNA-Binding Proteins metabolism, Receptors, Antigen, T-Cell, alpha-beta genetics, Receptors, Antigen, T-Cell, alpha-beta metabolism, Sequence Deletion, Viral Proteins genetics, Viral Proteins metabolism, Cytosol metabolism, Endoplasmic Reticulum metabolism, Histocompatibility Antigens Class I metabolism, Membrane Proteins metabolism
- Abstract
The human cytomegalovirus (HCMV) gene products US2 and US11 dislocate major histocompatibility class I heavy chains from the ER and target them for proteasomal degradation in the cytosol. The dislocation reaction is inhibited by agents that affect intracellular redox potential and/or free thiol status, such as diamide and N-ethylmaleimide. Subcellular fractionation experiments indicate that this inhibition occurs at the stage of discharge from the ER into the cytosol. The T cell receptor alpha (TCR alpha) chain is also degraded by a similar set of reactions, yet in a manner independent of virally encoded gene products. Diamide and N-ethylmaleimide likewise inhibit the dislocation of the full-length TCR alpha chain from the ER, as well as a truncated, mutant version of TCR alpha chain that lacks cysteine residues. Cytosolic destruction of glycosylated, ER-resident type I membrane proteins, therefore, requires maintenance of a proper redox potential for the initial step of removal of the substrate from the ER environment.
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- 1998
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20. Physical and functional association of the major histocompatibility complex class I heavy chain alpha3 domain with the transporter associated with antigen processing.
- Author
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Kulig K, Nandi D, Bacik I, Monaco JJ, and Vukmanović S
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Member 2, ATP Binding Cassette Transporter, Subfamily B, Member 3, Amino Acid Sequence, Animals, H-2 Antigens analysis, H-2 Antigens chemistry, Histocompatibility Antigen H-2D, Mice, Mice, Inbred C57BL, Molecular Sequence Data, Mutation, Structure-Activity Relationship, T-Lymphocytes, Cytotoxic physiology, beta 2-Microglobulin physiology, ATP-Binding Cassette Transporters physiology, Antigen Presentation, H-2 Antigens physiology
- Abstract
CD8+ T lymphocytes recognize antigens as short, MHC class I-associated peptides derived by processing of cytoplasmic proteins. The transporter associated with antigen processing translocates peptides from the cytosol into the ER lumen, where they bind to the nascent class I molecules. To date, the precise location of the class I-TAP interaction site remains unclear. We provide evidence that this site is contained within the heavy chain alpha3 domain. Substitution of a 15 amino acid portion of the H-2Db alpha3 domain (aa 219-233) with the analogous MHC class II (H-2IAd) beta2 domain region (aa 133-147) results in loss of surface expression which can be partially restored upon incubation at 26 degrees C in the presence of excess peptide and beta2-microglobulin. Mutant H-2Db (Db219-233) associates poorly with the TAP complex, and cannot present endogenously-derived antigenic peptides requiring TAP-dependent translocation to the ER. However, this presentation defect can be overcome through use of an ER targeting sequence which bypasses TAP-dependent peptide translocation. Thus, the alpha3 domain serves as an important site of interaction (directly or indirectly) with the TAP complex and is necessary for TAP-dependent peptide loading and class I surface expression.
- Published
- 1998
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21. TAP-independent delivery of antigenic peptides to the endoplasmic reticulum: therapeutic potential and insights into TAP-dependent antigen processing.
- Author
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Yewdell JW, Snyder HL, Bacik I, Antón LC, Deng Y, Behrens TW, Bachi T, and Bennink JR
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Member 2, Animals, Humans, ATP-Binding Cassette Transporters immunology, ATP-Binding Cassette Transporters metabolism, Antigen Presentation immunology, Endoplasmic Reticulum immunology, Endoplasmic Reticulum metabolism, Peptides immunology, Peptides metabolism
- Abstract
We have taken several approaches to investigate the capacity of the secretory pathway to liberate major histocompatibility complex (MHC) class I-restricted antigenic peptides from precursor polypeptides. Cells lacking the peptide transporter (TAP) are unable to deliver peptides from cytosolic antigens to class I molecules. TAP can be bypassed by targeting peptides directly to the endoplasmic reticulum (ER) using NH2-terminal signal sequences. This results in the generation of enormous numbers of MHC class I complexes (50,000 peptides/cell), and recombinant vaccinia viruses expressing such peptides are highly immunogenic. In contrast to signal sequence-targeted peptides, peptides are liberated very inefficiently from internal locations in ER-targeted full-length proteins, indicating that the secretory pathway has a limited capacity for generating antigenic peptides from most polypeptide contexts. We have, however, identified a location in proteins from which peptides can be liberated in numerous contexts in the secretory pathway. Placing a number of different peptides at the COOH termini of a secreted protein and two proteins with type II membrane anchors resulted in their TAP-independent presentation. These findings demonstrate that the secretory compartment possesses proteases able to liberate COOH-terminal antigenic peptides from virtually any context, entirely consistent with a role for these proteases in the processing of TAP-transported antigenic peptide precursors.
- Published
- 1998
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22. An endoplasmic reticulum-targeting signal sequence enhances the immunogenicity of an immunorecessive simian virus 40 large T antigen cytotoxic T-lymphocyte epitope.
- Author
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Fu TM, Mylin LM, Schell TD, Bacik I, Russ G, Yewdell JW, Bennink JR, and Tevethia SS
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- Animals, Antigen Presentation, Endoplasmic Reticulum immunology, Humans, Male, Mice, Mice, Inbred C57BL, Signal Transduction immunology, Antigens, Viral, Tumor immunology, Epitopes, T-Lymphocyte immunology, Simian virus 40 immunology, T-Lymphocytes, Cytotoxic immunology
- Abstract
An immunological hierarchy among three H-2Db-restricted cytotoxic T lymphocyte (CTL) determinants in simian virus 40 (SV40) large T antigen (Tag) was described previously: determinants I and II/III are immunodominant, whereas determinant V is immunorecessive. To assess the immunogenicity of each determinant individually and define mechanisms that contribute to the immunorecessive nature of determinant V, we constructed a panel of recombinant vaccinia viruses (rVVs) expressing minigenes encoding these determinants in various polypeptide contexts. We found the following. (i) Immunization of mice with an rVV encoding full-length SV40 Tag resulted in priming for CTL responses to determinants I and II/III but not determinant V. (ii) rVVs encoding peptide I or II/III in the cytosol or targeted to the endoplasmic reticulum (ER) were highly antigenic and immunogenic. (iii) rVVs encoding peptide V minigenes were antigenic and immunogenic if the peptide was targeted to the ER, expressed in the cytosol with short flanking sequences, or expressed from within a self-protein, murine dihydrofolate reductase. (iv) Presentation of the nonflanked peptide V (preceded by a Met codon only) could be enhanced by using a potent inhibitor of the proteasome. (v) H-2Db-epitope V peptide complexes decayed more rapidly than complexes containing epitope I or II/III peptides. In brefeldin A blocking experiments, functional epitope V complexes were detected longer on targets expressing ER-targeted epitope V than on targets expressing forms of epitope V dependent on the transporter associated with antigen processing. Therefore, limited formation of relatively unstable cell surface H-2Db complexes most likely contributes to the immunorecessive nature of epitope V within SV40 Tag. Increasing the delivery of epitope V peptide to the major histocompatibility complex class I presentation pathway by ER targeting dramatically enhanced the immunogenicity of epitope V.
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- 1998
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23. Strategies for tumor elimination by cytotoxic T lymphocytes.
- Author
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Sherman LA, Theobald M, Morgan D, Hernandez J, Bacik I, Yewdell J, Bennink J, and Biggs J
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- Animals, Antigens, Neoplasm immunology, Humans, Immune Tolerance immunology, Mice, Neoplasms immunology, Tumor Suppressor Protein p53 immunology, Neoplasms prevention & control, T-Lymphocytes, Cytotoxic immunology
- Abstract
Despite differences in their tissue of origin, many tumors share high level expression of certain tumor-associated proteins. Our laboratory has focused on the possibility of utilizing antigenic components of these proteins as a focus for T-cell immunotherapy of cancer. The advantage of targeting such commonly expressed proteins is the fact that such therapy could be of value in eliminating many different types of tumors. A potential barrier in the identification of T-cell epitopes derived from these proteins and presented by tumor cells is the fact that these proteins are also expressed at low levels in some normal tissues, and therefore, self-tolerance may eliminate T cells that are capable of recognizing these epitopes with high avidity. We have utilized two different murine model systems to explore the extent to which self-tolerance may limit the immune response to a tumor-specific antigen. The first compared the ability of mice deficient in expression of murine p53 (p53 knock-out mice) and normal mice, to respond against several epitopes of the p53 protein. The second model compares the ability of conventional mice with transgenic mice that express the influenza hemagglutinin in the periphery to respond to a dominant antigenic peptide of this transgene product. In both models we have investigated the effect self-tolerance has on elimination of tumors expressing the toleragen.
- Published
- 1998
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24. Introduction of a glycosylation site into a secreted protein provides evidence for an alternative antigen processing pathway: transport of precursors of major histocompatibility complex class I-restricted peptides from the endoplasmic reticulum to the cytosol.
- Author
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Bacik I, Snyder HL, Antón LC, Russ G, Chen W, Bennink JR, Urge L, Otvos L, Dudkowska B, Eisenlohr L, and Yewdell JW
- Subjects
- Animals, Biological Transport, Cytosol metabolism, Glycosylation, Mice, Mice, Inbred BALB C, Mice, Inbred CBA, Nucleocapsid Proteins, Peptide Fragments metabolism, Antigen Presentation, Endoplasmic Reticulum metabolism, Histocompatibility Antigens Class I physiology, Nucleoproteins metabolism, RNA-Binding Proteins, Viral Core Proteins metabolism
- Abstract
We found that the presentation of a H-2Kd-restricted determinant from influenza virus nucleoprotein (NP) to T cells is strictly dependent on expression of the transporter associated with antigen presentation (TAP), regardless of whether NP is expressed as a cytosolic or secreted NP (SNP). Introducing an N-linked glycosylation site into the determinant selectively reduced presentation of SNP. This indicates that glycosylation does not interfere with TAP-transported peptides, and therefore that cytosolic peptides derived from SNP must have been exposed to the glycosylation machinery of the endoplasmic reticulum (ER) before their existence in the cytosol. Based on these findings, we propose that TAP-dependent processing of at least some ER-targeted proteins entails the reimportation of protein from the secretory pathway to the cytosol, where the protein is processed via the classical pathway.
- Published
- 1997
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25. The human immunodeficiency virus type 1 (HIV-1) Vpu protein interferes with an early step in the biosynthesis of major histocompatibility complex (MHC) class I molecules.
- Author
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Kerkau T, Bacik I, Bennink JR, Yewdell JW, Húnig T, Schimpl A, and Schubert U
- Subjects
- CD8-Positive T-Lymphocytes virology, HeLa Cells, Human Immunodeficiency Virus Proteins, Humans, Immediate-Early Proteins immunology, Recombinant Proteins immunology, Vaccinia virus genetics, Viral Regulatory and Accessory Proteins genetics, CD8-Positive T-Lymphocytes immunology, Down-Regulation, HIV-1 immunology, Histocompatibility Antigens Class I biosynthesis, Viral Regulatory and Accessory Proteins immunology
- Abstract
The human immunodeficiency virus type 1 (HIV-1) vpu gene encodes a small integral membrane phosphoprotein with two established functions: degradation of the viral coreceptor CD4 in the endoplasmic reticulum (ER) and augmentation of virus particle release from the plasma membrane of HIV-1-infected cells. We show here that Vpu is also largely responsible for the previously observed decrease in the expression of major histocompatibility complex (MHC) class I molecules on the surface of HIV-1-infected cells. Cells infected with HIV-1 isolates that fail to express Vpu, or that express genetically modified forms of Vpu that no longer induce CD4 degradation, exhibit little downregulation of MHC class I molecules. The effect of Vpu on class I biogenesis was analyzed in more detail using a Vpu-expressing recombinant vaccinia virus (VV). VV-expressed Vpu induces the rapid loss of newly synthesized endogenous or VV-expressed class I heavy chains in the ER, detectable either biochemically or by reduced cell surface expression. This effect is of similar rapidity and magnitude as the VV-expressed Vpu-induced degradation of CD4. Vpu had no discernible effects on cell surface expression of VV-expressed mouse CD54, demonstrating the selectivity of its effects on CD4 and class I heavy chains. VV-expressed Vpu does not detectably affect class I molecules that have been exported from the ER. The detrimental effects of Vpu on class I molecules could be distinguished from those caused by VV-expressed herpes virus protein ICP47, which acts by decreasing the supply of cytosolic peptides to class I molecules, indicating that Vpu functions in a distinct manner from ICP47. Based on these findings, we propose that Vpu-induced downregulation of class I molecules may be an important factor in the evolutionary selection of the HIV-1-specific vpu gene by contributing to the inability of CD8+ T cells to eradicate HIV-1 from infected individuals.
- Published
- 1997
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26. Antigen processing: where tumor-specific T-cell responses begin.
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Bennink JR, Anderson R, Bacik I, Cox J, Day P, Deng Y, Lapham C, Link H, Russ G, and Yewdell JW
- Subjects
- Animals, Antibody Specificity, Antigen-Antibody Reactions, Biological Transport immunology, Histocompatibility Antigens Class I, Humans, Peptides immunology, Antigen Presentation, Antigens, Neoplasm, T-Lymphocytes, Regulatory immunology
- Abstract
It is well established that tumor-specific CD8+ T cells have the capacity to prevent and cure malignancies in animals under experimental conditions. This has raised expectations that it will prove possible to achieve similar successes with human cancers. CD8+ T cells recognize peptides of 8-10 residues derived from cytosolic proteins that are bound to the class I molecules of the major histocompatibility complex. To most effectively manipulate the T-cell response to tumor cells, it is essential to understand the means by which the peptide-class I complex is created in cells. An overview of this process is provided with an emphasis toward the recent findings made by our laboratory.
- Published
- 1993
- Full Text
- View/download PDF
27. Expression of a membrane protease enhances presentation of endogenous antigens to MHC class I-restricted T lymphocytes.
- Author
-
Eisenlohr LC, Bacik I, Bennink JR, Bernstein K, and Yewdell JW
- Subjects
- ATP Binding Cassette Transporter, Subfamily B, Member 2, ATP Binding Cassette Transporter, Subfamily B, Member 3, Amino Acid Sequence, Animals, Cell Line, Endoplasmic Reticulum metabolism, Humans, Molecular Sequence Data, Mutation, T-Lymphocytes metabolism, ATP-Binding Cassette Transporters, Antigen-Presenting Cells enzymology, Carrier Proteins metabolism, Endopeptidases metabolism, Histocompatibility Antigens Class II metabolism, Membrane Proteins biosynthesis, Peptidyl-Dipeptidase A metabolism
- Abstract
We find that expression of the membrane dipeptidyl carboxypeptidase angiotensin-converting enzyme (ACE) enhances presentation of certain endogenously synthesized peptides to major histocompatibility complex (MHC) class I-restricted cytotoxic T lymphocytes. ACE appears to function only in an intracellular secretory compartment of antigen-presenting cells. ACE-enhanced antigen presentation requires the expression of the putative antigenic peptide transporters, TAP1 and TAP2. These findings demonstrate that a protease can influence the processing of endogenously synthesized antigens and strongly suggest that longer peptides can be transported from the cytosol to a secretory compartment where trimming of antigenic peptides to the lengths preferred by MHC class I molecules can occur if the appropriate protease is present.
- Published
- 1992
- Full Text
- View/download PDF
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