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Cells and other soft particles are often forced to flow in confined geometries in both laboratory and natural environments, where the elastic deformation induces an additional drag and pressure drop across the particle. In contrast with other multiphase flows, the physical parameters that determine this additional pressure are still not known. Here we start by measuring the pressure drop across a single spherical hydrogel particle as it flows in a microfluidic comparator. This pressure is found to depend on the amount of confinement, elastic modulus, fluid viscosity and velocity. A model for the force balance on the particle is then proposed, by incorporating the above ingredients and relying on simulations of bead geometry and lubrication flow considerations. The final model collapses the force measurements forces onto a single scaling law spanning several decades, while providing physical insights by recalling elements from classic multiphase flows and contact mechanics., Comment: Main Text 4 Pages, Supp text 5 pages. 4 main text figures, 4 supp text figures

The growth of a population is often modeled as branching process where each individual at the end of its life is replaced by a certain number of offspring. An example of these branching models is the Bellman-Harris process, where the lifetime of individuals is assumed to be independent and identically distributed. Here, we are interested in the estimation of the parameters of the Bellman-Harris model, motivated by the estimation of cell division time. Lifetimes are distributed according a Gamma distribution and we follow a population that starts from a small number of individuals by performing time-resolved measurements of the population size. The exponential growth of the population size at the beginning offers an easy estimation of the mean of the lifetime. Going farther and describing lifetime variability is a challenging task however, due to the complexity of the fluctuations of non-Markovian branching processes. Using fine and recent results on these fluctuations, we describe two time-asymptotic regimes and explain how to estimate the parameters. Then, we both consider simulations and biological data to validate and discuss our method. The results described here provide a method to determine single-cell parameters from time-resolved measurements of populations without the need to track each individual or to know the details of the initial condition.

The capture of a soft spherical particle by a rectangular slit leads to a non-monotonic pressure-flow rate relation at low Reynolds number. In the presence of the trapped particle the flow-induced deformations focus the streamlines and pressure drop to a small region. This increases the resistance to flow by several orders of magnitude as the driving pressure is increased. As a result two regimes are observed: a flow-dominated regime for small particle deformations, where flow rate increases with pressure, and an elastic-dominated regime in which solid deformations block the flow., Comment: 5 pages, 4 figures

Due to their morphology, the dynamics of bacteria suspended in media can exhibit complex behaviors. In the presence of a shear, swimming bacteria experience a drift perpendicular to the shear plane. This drift, termed rheotaxis, is studied here semi-analytically, numerically and experimentally. We find the dependency of bacterial orientation and bacterial speed on the shear rate, in the presence of rotational diffusion. This enables us to show that the drift speed of bacteria perpendicular to the shear is predominantly due to bacterial propulsion, and not rheotactic forces. Comparing the drift speed of bacteria and diffusion leads to the definition of a P\'{e}clet number. The rheotactic effect increases with the shear, reaching a plateau at very large P\'{e}clet numbers, in good agreement with experiments of rheotaxis performed in microfluidic droplets., Comment: 15 pages, 9 figures

Rare-earth phosphors exhibit unique luminescence polarization features originating from the anisotropic symmetry of the emitter ion's chemical environment. However, to take advantage of this peculiar property, it is necessary to control and measure the ensemble orientation of the host particles with a high degree of precision. Here, we show a methodology to obtain the photoluminescence polarization of Eu-doped LaPO4 nano rods assembled in an electrically modulated liquid-crystalline phase. We measure Eu3+ emission spectra for the three main optimal configurations ({\sigma}, {\pi} and {\alpha}, depending on the direction of observation and the polarization axes) and use them as a reference for the nano rod orientation analysis. Based on the fact that flowing nano rods tend to orient along the shear strain profile, we use this orientation analysis to measure the local shear rate in a flowing liquid. The potential of this approach is then demonstrated through tomographic imaging of the shear rate distribution in a microfluidic system., Comment: 8 pages, 3 figures + supplementary files for experimental and numerical methods

We study microfluidic self digitization in Hele-Shaw cells using pancake droplets anchored to surface tension traps. We show that above a critical flow rate, large anchored droplets break up to form two daughter droplets, one of which remains in the anchor. Below the critical flow velocity for breakup the shape of the anchored drop is given by an elastica equation that depends on the capillary number of the outer fluid. As the velocity crosses the critical value, the equation stops admitting a solution that satisfies the boundary conditions; the drop breaks up in spite of the neck still having finite width. A similar breaking event also takes place between the holes of an array of anchors, which we use to produce a 2D array of stationary drops in situ., Comment: 5 pages, 4 figures, to appear in Phys. Rev. Applied

We study a liquid jet that breaks up into drops in an external co-flowing liquid inside a confining microfluidic geometry. The jet breakup can occur right after the nozzle in a phenomenon named dripping or through the generation of a liquid jet that breaks up a long distance from the nozzle, which is called jetting. Traditionally, these two regimes have been considered to reflect the existence of two kinds of spatiotemporal instabilities of a fluid jet, the dripping regime corresponding to an absolutely unstable jet and the jetting regime to a convectively unstable jet. Here, we present quantitative measurements of the dripping and jetting regimes, both in an unforced and a forced state, and compare these measurements with recent theoretical studies of spatiotemporal instability of a confined liquid jet in a co-flowing liquid. In the unforced state, the frequency of oscillation and breakup of the liquid jet is measured and compared to the theoretical predictions. The dominant frequency of the jet oscillations as a function of the inner flow rate agrees qualitatively with the theoretical predictions in the jetting regime but not in the dripping regime. In the forced state, achieved with periodic laser heating, the dripping regime is found to be insensitive to the perturbation and the frequency of drop formation remains unaltered. The jetting regime, on the contrary, amplifies the externally imposed frequency, which translates in the formation of drops at the frequency imposed by the external forcing. In conclusion, the dripping and jetting regimes are found to exhibit the main features of absolutely and convectively unstable flows respectively, but the frequency selection in the dripping regime is not ruled by the absolute frequency predicted by the stability analysis., Comment: 10 pages, 12 figures, to appear in Physics of Fluids

This fluid dynamics video shows drops of water being transported by a mean flow of oil, in a microchannel shaped as a logarithmic spiral. The channel shape means that the drops are submitted to an increasing shear and elongation as they flow nearer to the center of the spiral. A critical point is reached at which a long singular tail is observed behind the drops, indicating that the drops are accelerating. This is called "Tip streaming"., Comment: Abstract accompanying movie to the Gallery of Fluid Motion: APS-DFD 2008

We confront, quantitatively, the theoretical description of the reaction-diffusion of a second order reaction to experiment. The reaction at work is \ca/CaGreen, and the reactor is a T-shaped microchannel, 10 $\mu$m deep, 200 $\mu$m wide, and 2 cm long. The experimental measurements are compared with the two-dimensional numerical simulation of the reaction-diffusion equations. We find good agreement between theory and experiment. From this study, one may propose a method of measurement of various quantities, such as the kinetic rate of the reaction, in conditions yet inaccessible to conventional methods.

Our velocity measurements on a quasi-two-dimensional turbulent flow in a rapidly rotating annulus yield an inverse cascade with E(k)~k^{-2} rather than the expected E(k)~k^{-5/3}. The probability distribution functions for longitudinal velocity differences, \delta_v(r)=v(x+r)-v(x), are self-similar (scale independent) but strongly non-Gaussian, which suggests that the coherent vortices play a significant role. The structure functions, <[\delta_v(r)]^p>~r^{\zeta_p}, exhibit anomalous scaling: \zeta_p=p/2 rather than \zeta_p=p/3 as in the 1941 Kolmogorov theory., Comment: 11 pages, 5 figures