159 results on '"B. Brant"'
Search Results
2. Back Cover
- Author
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B. Brant Bynum
- Published
- 2018
3. Mediating the Duality of Existence
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B. Brant Bynum
- Published
- 2018
4. The Ways of the Imagination
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B. Brant Bynum
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- 2018
5. Works Consulted
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B. Brant Bynum
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- 2018
6. Title Page, Copyright
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B. Brant Bynum
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- 2018
7. Romanticism, Imagination and Bécquer
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B. Brant Bynum
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- 2018
8. Nutritional profile of rodent diets impacts experimental reproducibility in microbiome preclinical research
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C. J. Tuck, G. De Palma, K. Takami, B. Brant, A. Caminero, D. E. Reed, J. G. Muir, P. R. Gibson, A. Winterborn, E. F. Verdu, P. Bercik, and S. Vanner
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Medicine ,Science - Abstract
Abstract The lack of reproducibility of animal experimental results between laboratories, particularly in studies investigating the microbiota, has raised concern among the scientific community. Factors such as environment, stress and sex have been identified as contributors, whereas dietary composition has received less attention. This study firstly evaluated the use of commercially available rodent diets across research institutions, with 28 different diets reported by 45 survey respondents. Secondly, highly variable ingredient, FODMAP (Fermentable Oligo-, Di-, Mono-saccharides And Polyols) and gluten content was found between different commercially available rodent diets. Finally, 40 mice were randomized to four groups, each receiving a different commercially available rodent diet, and the dietary impact on cecal microbiota, short- and branched-chain fatty acid profiles was evaluated. The gut microbiota composition differed significantly between diets and sexes, with significantly different clusters in β-diversity. Total BCFA were highest (p = 0.01) and SCFA were lowest (p = 0.03) in mice fed a diet lower in FODMAPs and gluten. These results suggest that nutritional composition of commercially available rodent diets impact gut microbiota profiles and fermentation patterns, with major implications for the reproducibility of results across laboratories. However, further studies are required to elucidate the specific dietary factors driving these changes.
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- 2020
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9. Achieving Self-Directed Integrated Cancer Aftercare (ASICA) in melanoma: protocol for a randomised patient-focused pilot trial of delivering the ASICA intervention as a means to earlier detection of recurrent and second primary melanoma
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P. Murchie, J. Masthoff, F. M. Walter, K. Rahman, J. L. Allan, N. Burrows, C. Proby, A. J. Lee, M. Johnston, A. Durrani, I. Depasquale, B. Brant, A. Neilson, F. Meredith, S. Treweek, S. Hall, and A. McDonald
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Primary care ,Melanoma ,Cancer ,Randomised controlled trial ,Survivorship ,Self-directed care ,Medicine (General) ,R5-920 - Abstract
Abstract Background Melanoma is common; 15,906 people in the UK were diagnosed with melanoma in 2015 and incidence has increased fivefold in 30 years. Melanoma affects old and young people, with poor prognosis once metastatic. UK guidelines recommend people treated for cutaneous melanoma receive extended outpatient, hospital follow up to detect recurrence or new primaries. Such follow up of the growing population of melanoma survivors is burdensome for both individuals and health services. Follow up is important since approximately 20% of patients with early-stage melanoma experience a recurrence and 4–8% develop a new primary; the risk of either is highest in the first 5 years. Achieving Self-directed Integrated Cancer Aftercare (ASICA) is a digital intervention to increase total-skin-self-examination (TSSE) by people treated for melanoma, with usual follow up. Methods We aim to recruit 240 adults with a previous first-stage 0-2C primary cutaneous melanoma, from secondary care in North-East Scotland and the East of England. Participants will be randomised to receive the ASICA intervention (a tablet-based digital intervention to prompt and support TSSE) or control group (treatment as usual). Patient-reported and clinical data will be collected at baseline, including the modified Melanoma Worry Scale (MWS), the Hospital Anxiety and Depression Scale (HADs), the EuroQoL 5-dimension 5-level questionnaire (EQ-5D-5 L), and questions about TSSE practice, intentions, self-efficacy and planning. Participants will be followed up by postal questionnaire at 3, 6 and 12 months following randomization, along with a 12-month review of clinical data. The primary timepoint for outcome analyses will be12 months after randomisation. Discussion If the ASICA intervention improves the practice of TSSE in those affected by melanoma, this may lead to improved psychological well-being and earlier detection of recurrent and new primary melanoma. This could impact both patients and National Health Service (NHS) resources. This study will determine if a full-scale randomised controlled trial can be undertaken in the UK NHS to provide the high-quality evidence needed to determine the effectiveness of the intervention. ASICA is a pilot study evaluating the effectiveness of the practice of digitally supported TSSE in those affected by melanoma. Trial registration Clinical Trials.gov, NCT03328247. Registered on 1 November 2017.
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- 2019
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10. Cancer cell permeability is increased after Tumor Treating Fields (TTFields) application
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T. Voloshin, Y. Porat, A. Volodin, N. Kaynan, A. Klein-Goldberg, R. Paz, B. Brant, E. Zemer-Tov, A. Haber, M. Giladi, U. Weinberg, and Y. Palti
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Neurology. Diseases of the nervous system ,RC346-429 - Published
- 2021
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11. Developing a shared sepsis data infrastructure: a systematic review and concept map to FHIR
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Emily B. Brant, Jason N. Kennedy, Andrew J. King, Lawrence D. Gerstley, Pranita Mishra, David Schlessinger, James Shalaby, Gabriel J. Escobar, Derek C. Angus, Christopher W. Seymour, and Vincent X. Liu
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Computer applications to medicine. Medical informatics ,R858-859.7 - Abstract
Abstract The development of a shared data infrastructure across health systems could improve research, clinical care, and health policy across a spectrum of diseases, including sepsis. Awareness of the potential value of such infrastructure has been heightened by COVID-19, as the lack of a real-time, interoperable data network impaired disease identification, mitigation, and eradication. The Sepsis on FHIR collaboration establishes a dynamic, federated, and interoperable system of sepsis data from 55 hospitals using 2 distinct inpatient electronic health record systems. Here we report on phase 1, a systematic review to identify clinical variables required to define sepsis and its subtypes to produce a concept mapping of elements onto Fast Healthcare Interoperability Resources (FHIR). Relevant papers described consensus sepsis definitions, provided criteria for sepsis, severe sepsis, septic shock, or detailed sepsis subtypes. Studies not written in English, published prior to 1970, or “grey” literature were prospectively excluded. We analyzed 55 manuscripts yielding 151 unique clinical variables. We then mapped variables to their corresponding US Core FHIR resources and specific code values. This work establishes the framework to develop a flexible infrastructure for sharing sepsis data, highlighting how FHIR could enable the extension of this approach to other important conditions relevant to public health.
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- 2022
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12. Neutron scattering study of polyamorphic THF·17(H2O) – toward a generalized picture of amorphous states and structures derived from clathrate hydrates
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Paulo H. B. Brant Carvalho, Mikhail Ivanov, Ove Andersson, Thomas Loerting, Marion Bauer, Chris A. Tulk, Bianca Haberl, Luke L. Daemen, Jamie J. Molaison, Katrin Amann-Winkel, Alexander P. Lyubartsev, Craig L. Bull, Nicholas P. Funnell, and Ulrich Häussermann
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General Physics and Astronomy ,Physical and Theoretical Chemistry ,Condensed Matter Physics ,Den kondenserade materiens fysik - Abstract
From crystalline tetrahydrofuran clathrate hydrate, THF-CH (THF·17H2O, cubic structure II), three distinct polyamorphs can be derived. First, THF-CH undergoes pressure-induced amorphization when pressurized to 1.3 GPa in the temperature range 77-140 K to a form which, in analogy to pure ice, may be called high-density amorphous (HDA). Second, HDA can be converted to a densified form, VHDA, upon heat-cycling at 1.8 GPa to 180 K. Decompression of VHDA to atmospheric pressure below 130 K produces the third form, recovered amorphous (RA). Results from neutron scattering experiments and molecular dynamics simulations provide a generalized picture of the structure of amorphous THF hydrates with respect to crystalline THF-CH and liquid THF·17H2O solution (∼2.5 M). Although fully amorphous, HDA is heterogeneous with two length scales for water-water correlations (less dense local water structure) and guest-water correlations (denser THF hydration structure). The hydration structure of THF is influenced by guest-host hydrogen bonding. THF molecules maintain a quasiregular array, reminiscent of the crystalline state, and their hydration structure (out to 5 Å) constitutes ∼23H2O. The local water structure in HDA is reminiscent of pure HDA-ice featuring 5-coordinated H2O. In VHDA, the hydration structure of HDA is maintained but the local water structure is densified and resembles pure VHDA-ice with 6-coordinated H2O. The hydration structure of THF in RA constitutes ∼18 H2O molecules and the water structure corresponds to a strictly 4-coordinated network, as in the liquid. Both VHDA and RA can be considered as homogeneous.
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- 2023
13. Initial Development of an Automated Platform for Assessing Trainee Performance on Case Presentations
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Andrew J. King, Jeremy M. Kahn, Emily B. Brant, Gregory F. Cooper, and Danielle L. Mowery
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General Medicine - Published
- 2022
14. Exploring High-Pressure Transformations in Low-Z (H2, Ne) Hydrates at Low Temperatures
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Paulo H. B. Brant Carvalho, Amber Mace, Inna Martha Nangoi, Alexandre A. Leitão, Chris A. Tulk, Jamie J. Molaison, Ove Andersson, Alexander P. Lyubartsev, and Ulrich Häussermann
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hydrogen hydrate ,neon hydrate ,pressure effects ,neutron diffraction ,molecular dynamics ,clathrate hydrates ,Crystallography ,QD901-999 - Abstract
The high pressure structural behavior of H2 and Ne clathrate hydrates with approximate composition H2/Ne·~4H2O and featuring cubic structure II (CS-II) was investigated by neutron powder diffraction using the deuterated analogues at ~95 K. CS-II hydrogen hydrate transforms gradually to isocompositional C1 phase (filled ice II) at around 1.1 GPa but may be metastably retained up to 2.2 GPa. Above 3 GPa a gradual decomposition into C2 phase (H2·H2O, filled ice Ic) and ice VIII’ takes place. Upon heating to 200 K the CS-II to C1 transition completes instantly whereas C1 decomposition appears sluggish also at 200 K. C1 was observed metastably up to 8 GPa. At 95 K C1 and C2 hydrogen hydrate can be retained below 1 GPa and yield ice II and ice Ic, respectively, upon complete release of pressure. In contrast, CS-II neon hydrate undergoes pressure-induced amorphization at 1.9 GPa, thus following the general trend for noble gas clathrate hydrates. Upon heating to 200 K amorphous Ne hydrate crystallizes as a mixture of previously unreported C2 hydrate and ice VIII’.
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- 2021
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15. Pressure-Induced Amorphization and Distinct Amorphous States of Clathrate Hydrates
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B. Brant Carvalho, Paulo H. and B. Brant Carvalho, Paulo H.
- Abstract
This thesis summarizes a study on the pressure-induced amorphization (PIA) and structures of amorphous states of clathrate hydrates (CHs). PIA involves the transition of a crystalline material into an amorphous solid in response of mechanical compression at temperatures well below the melting point. The first material observed to undergo PIA was hexagonal ice. More recently it was shown that compounds of water undergo the same phenomenon without decomposition, despite the presence of solutes. CHs, which are crystalline inclusion compounds consisting of water molecules encaging small guest species, undergo PIA at ca. 1–4 GPa below 145 K. The obtained amorphous CH phase can be further densified on isobaric heating at high pressure. This annealing step enables to retain an amorphous material on pressure release. There has been a significant amount of studies into the understanding of the nature of PIA and transformations between amorphous phases of pure ice. The aim of this thesis has been the understanding of the PIA in CHs and its relation to pure ice. New information on the nature of PIA and subsequent amorphous-amorphous transitions in CH systems were gained from structural studies and in situ neutron diffraction played pivotal role due to the sensitivity of neutrons to the light element hydrogen. Here a generalized understanding of the PIA in CHs and a clear image of amorphous CH structures are presented., Denna avhandling sammanfattar en studie om tryckinducerad amorfisering (TIA) av klatrathydrater (KH), samt strukturer av amorfa tillstånd där av. TIA är övergången av ett kristallint material till ett amorft fast ämne som svar på mekanisk kompression vid temperaturer långt under smältpunkten. Det första materialet som observerades genomgå TIA var hexagonal is. Därefter har det visat sig att det finns strukturer av vatten som trots närvaron av lösta ämnen genomgår samma fenomen utan att strukturen bryts ned. KH:er är kristallina inneslutningskomplex som består av ett gitter av vattenmolekyler, vilka omsluter små gästmolekyler. Dessa strukturer genomgår TIA vid ca. 1–4 GPa vid temperaturer under 145 K. Den erhållna amorfa KH-fasen kan förtätas ytterligare vid isobarisk uppvärmning under högt tryck. Detta steg gör det möjligt att behålla ett amorft material vid tryckavlastning. Det har gjorts en betydande mängd studier av TIA:s natur och omvandlingar mellan amorfa faser av ren is. Syftet med denna avhandling har varit att förstå TIA i KH:er och dess relation till ren is. Ny information om karaktären hos TIA och efterföljande amorfa-amorfa övergångar i KH-system erhölls från strukturella studier, där in situ neutrondiffraktion spelade en avgörande roll tack vare neutronernas känslighet för det lätta elementet väte. Utifrån detta arbete presenteras här en generaliserad förståelse av TIA i KH samt en tydlig bild av amorfa KH-strukturer.
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- 2023
16. Neutron scattering study of polyamorphic THF·17(H2O) – toward a generalized picture of amorphous states and structures derived from clathrate hydrates
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B. Brant Carvalho, Paulo H., Ivanov, Mikhail, Andersson, Ove, Loerting, Thomas, Bauer, Marion, Tulk, Chris A., Haberl, Bianca, Daemen, Luke L., Molaison, Jamie J., Amann-Winkel, Katrin, Lyubartsev, Alexander P., Bull, Craig L., Funnell, Nicholas P., Häussermann, Ulrich, B. Brant Carvalho, Paulo H., Ivanov, Mikhail, Andersson, Ove, Loerting, Thomas, Bauer, Marion, Tulk, Chris A., Haberl, Bianca, Daemen, Luke L., Molaison, Jamie J., Amann-Winkel, Katrin, Lyubartsev, Alexander P., Bull, Craig L., Funnell, Nicholas P., and Häussermann, Ulrich
- Abstract
From crystalline tetrahydrofuran clathrate hydrate, THF–CH (THF·17H2O, cubic structure II), three distinct polyamorphs can be derived. First, THF–CH undergoes pressure-induced amorphization when pressurized to 1.3 GPa in the temperature range 77–140 K to a form which, in analogy to pure ice, may be called high-density amorphous (HDA). Second, HDA can be converted to a densified form, VHDA, upon heat-cycling at 1.8 GPa to 180 K. Decompression of VHDA to atmospheric pressure below 130 K produces the third form, recovered amorphous (RA). Results from neutron scattering experiments and molecular dynamics simulations provide a generalized picture of the structure of amorphous THF hydrates with respect to crystalline THF–CH and liquid THF·17H2O solution (∼2.5 M). Although fully amorphous, HDA is heterogeneous with two length scales for water–water correlations (less dense local water structure) and guest–water correlations (denser THF hydration structure). The hydration structure of THF is influenced by guest–host hydrogen bonding. THF molecules maintain a quasiregular array, reminiscent of the crystalline state, and their hydration structure (out to 5 Å) constitutes ∼23H2O. The local water structure in HDA is reminiscent of pure HDA-ice featuring 5-coordinated H2O. In VHDA, the hydration structure of HDA is maintained but the local water structure is densified and resembles pure VHDA-ice with 6-coordinated H2O. The hydration structure of THF in RA constitutes ∼18 H2O molecules and the water structure corresponds to a strictly 4-coordinated network, as in the liquid. Both VHDA and RA can be considered as homogeneous.
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- 2023
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17. Leveraging Technology to Overcome the 'Scalability Problem' in Communication Skills Training Courses
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Emily B. Brant, Robert M. Arnold, Douglas B. White, Mary E. Callahan, Marie K Norman, and Deepika Mohan
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education ,Knowledge management ,business.industry ,Computer science ,Educational technology ,educational technology ,decision-making ,General Medicine ,Communication skills training ,medical ,Variety (cybernetics) ,Scalability ,Critical illness ,business.product_line ,critical illness ,Communication skills ,business ,Perspectives - Abstract
Although multiple consensus statements have called for large-scale efforts to improve clinicians' communication skills regarding a variety of difficult conversations in medicine, this goal will be difficult to attain because there are no readily scalable, validated communication skills training programs for clinicians. However, novel applications of existing technologies and approaches grounded in learning science can overcome the scalability barriers. Moreover, future advances in virtual reality and artificial intelligence are likely to greatly enhance the possibilities for communication skills training programs. The purpose of this paper is to propose a scalable, theoretically grounded method to train clinicians in advanced communication skills in medicine. First, we summarize four key principles of adult learning relevant to communication skills training in medicine. Second, we discuss recommended practices to design effective technology-enhanced educational interventions, with an emphasis on achieving high amounts of user engagement. Third, we synthesize these principles into a framework for a web- and videoconference-based platform for teaching advanced communication skills in medicine. Once developed, this low-cost, scalable training platform has the potential to allow thousands of clinicians to acquire the advanced communication skills needed for difficult conversations in medicine.
- Published
- 2021
18. Enhancing Cancer Cell Membrane Permeability by Application of Tumor Treating Fields (TTFields)
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B. Koltun, T. Voloshin, T. Kan, C. David, L. Koren, Y. Porat, A. Volodin, N. Kaynan, A. Klein-Goldberg, R. Paz, B. Brant, Y. Barsheshet, E. Zemer-Tov, A. Haber, M. Giladi, U. Weinberg, and Y. Palti
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Cancer Research ,Radiation ,Oncology ,Radiology, Nuclear Medicine and imaging - Published
- 2022
19. Evidence suggesting kinetic unfreezing of water mobility in two distinct processes in pressure-amorphized clathrate hydrates
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Ove Andersson, Paulo H. B. Brant Carvalho, Ulrich Häussermann, and Ying-Jui Hsu
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Fysikalisk kemi ,General Physics and Astronomy ,Physical and Theoretical Chemistry ,Condensed Matter Physics ,Den kondenserade materiens fysik ,Physical Chemistry - Abstract
Type II clathrate hydrates (CHs) with tetrahydrofuran (THF), cyclobutanone (CB) or 1,3-dioxolane (DXL) guest molecules collapse to an amorphous state near 1 GPa on pressurization below 140 K. On subsequent heating in the 0.2-0.7 GPa range, thermal conductivity and heat capacity results of the homogeneous amorphous solid show two glass transitions, first a thermally weak glass transition, GT1, near 130 K; thereafter a thermally strong glass transition, GT2, which implies a transformation to an ultraviscous liquid on heating. Here we compare the GTs of normal and deuterated samples and samples with different guest molecules. The results show that GT1 and GT2 are unaffected by deuteration of the THF guest and exchange of THF with CB or DXL, whereas the glass transition temperatures (Tgs) shift to higher temperatures on deuteration of water; Tg of GT2 increases by 2.5 K. These results imply that both GTs are associated with the water network. This is corroborated by the fact that GT2 is detected only in the state which is the amorphized CH's counterpart of expanded high density amorphous ice. The results suggest a rare transition sequence of an orientational glass transition followed by a glass to liquid transition, i.e., kinetic unfreezing of H2O reorientational and translational mobility in two distinct processes.
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- 2022
20. EP16.01-016 Tumor Treating Fields (TTFields) Application Promotes a Pro-inflammatory Phenotype in Macrophages
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Y. Barsheshet, B. Brant, T. Voloshin, A. Volodin, L. Koren, B. Koltun, A. Klein-Goldberg, E. Zemer-Tov, T. Kan, R. Paz, M. Giladi, U. Weinberg, and Y. Palti
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Pulmonary and Respiratory Medicine ,Oncology - Published
- 2022
21. Vibrational properties of SrVO2H with large spin-phonon coupling
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Rasmus Lavén, Pedro Ivo R. Moraes, Michael Sannemo Targama, Maths Karlsson, Alexandre A. Leitão, Paulo H. B. Brant Carvalho, Stewart F. Parker, Ulrich Häussermann, and Olga Yu. Vekilova
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Physics and Astronomy (miscellaneous) ,General Materials Science - Published
- 2022
22. In situ inelastic neutron scattering of mixed CH4–CO2 hydrates
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Cladek, Bernadette R., Ramirez-Cuesta, A. J., Everett, S. Michelle, McDonnell, Marshall T., Daemen, Luke, Cheng, Yongqiang, B. Brant Carvalho, Paulo H., Tulk, Christopher, Tucker, Matthew G., Keffer, David J., Rawn, Claudia J., Cladek, Bernadette R., Ramirez-Cuesta, A. J., Everett, S. Michelle, McDonnell, Marshall T., Daemen, Luke, Cheng, Yongqiang, B. Brant Carvalho, Paulo H., Tulk, Christopher, Tucker, Matthew G., Keffer, David J., and Rawn, Claudia J.
- Abstract
An abundant source of CH4 can be found in natural hydrate deposits. Recent demonstration of CH4 recovery from hydrates via CO2 exchange has revealed the potential as a fuel source that also provides a medium for carbon sequestration. It is vital to understand the structural and dynamic impacts of guest variation in CH4, CO2, and mixed hydrates and link the results to the stability of various deposits in nature, harvesting methane, and sequestering CO2. Molecular vibrations are examined in CH4, CO2, and mixed CH4-CO2 hydrates at 5 and 190 K and Xe hydrates for comparison. Inelastic neutron scattering (INS) is an ideal spectroscopy technique to observe the dynamic modes in the hydrate structure and enclathrated CH4, as it is extremely sensitive to 1H. The presence of CO2 in hydrates tightens the lattice. It introduces more active librational modes to the host lattice, while hindering the motion of CH4 in mixed CH4-CO2 hydrate at 5 K. At 190 K, a large broadening of the CH4 librational modes indicates disorder in the structure leading to dissociation.
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- 2022
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23. Evidence suggesting kinetic unfreezing of water mobility in two distinct processes in pressure-amorphized clathrate hydrates
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Andersson, Ove, B. Brant Carvalho, Paulo H., Häussermann, Ulrich, Hsu, Ying-Jui, Andersson, Ove, B. Brant Carvalho, Paulo H., Häussermann, Ulrich, and Hsu, Ying-Jui
- Abstract
Type II clathrate hydrates (CHs) with tetrahydrofuran (THF), cyclobutanone (CB) or 1,3-dioxolane (DXL) guest molecules collapse to an amorphous state near 1 GPa on pressurization below 140 K. On subsequent heating in the 0.2–0.7 GPa range, thermal conductivity and heat capacity results of the homogeneous amorphous solid show two glass transitions, first a thermally weak glass transition, GT1, near 130 K; thereafter a thermally strong glass transition, GT2, which implies a transformation to an ultraviscous liquid on heating. Here we compare the GTs of normal and deuterated samples and samples with different guest molecules. The results show that GT1 and GT2 are unaffected by deuteration of the THF guest and exchange of THF with CB or DXL, whereas the glass transition temperatures (Tgs) shift to higher temperatures on deuteration of water; Tg of GT2 increases by 2.5 K. These results imply that both GTs are associated with the water network. This is corroborated by the fact that GT2 is detected only in the state which is the amorphized CH's counterpart of expanded high density amorphous ice. The results suggest a rare transition sequence of an orientational glass transition followed by a glass to liquid transition, i.e., kinetic unfreezing of H2O reorientational and translational mobility in two distinct processes.
- Published
- 2022
- Full Text
- View/download PDF
24. Vibrational properties of SrVO2H with large spin-phonon coupling
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Lavén, Rasmus, Moraes, Pedro Ivo R., Sannemo Targama, Michael, Karlsson, Maths, Leitão, Alexandre A., B. Brant Carvalho, Paulo H., Parker, Stewart F., Häussermann, Ulrich, Vekilova, Olga Yu., Lavén, Rasmus, Moraes, Pedro Ivo R., Sannemo Targama, Michael, Karlsson, Maths, Leitão, Alexandre A., B. Brant Carvalho, Paulo H., Parker, Stewart F., Häussermann, Ulrich, and Vekilova, Olga Yu.
- Abstract
The antiferromagnetic transition metal oxyhydride SrVO2H is distinguished by its stoichiometric composition and an ordered arrangement of H atoms. The tetragonal structure is related to the cubic perovskite and consists of alternating layers of VO2 and SrH. d2 V(III) attains a sixfold coordination by four O and two H atoms. The latter are arranged in a trans fashion, which produces H–V–H chains along the tetragonal axis. Here, we investigate the vibrational properties of SrVO2H by inelastic neutron scattering and infrared spectroscopy combined with phonon calculations based on density functional theory. The H-based vibrational modes divide into a degenerate bending motion perpendicular to the H–V–H chain direction and a highly dispersed stretching motion along the H–V–H chain direction. The bending motion, with a vibrational frequency of approximately 800 cm−1, is split into two components separated by about 50 cm−1, owing to the doubled unit cell from the antiferromagnetic structure. Interestingly, spin-phonon coupling stiffens the H-based modes by 50−100cm−1 although super-exchange coupling via H is very small. Frequency shifts of the same order of magnitude also occur for V–O modes. It is inferred that SrVO2H displays the hitherto largest recognized coupling between magnetism and phonons in a material.
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- 2022
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25. Exploring High-Pressure Transformations in Low-Z (H2, Ne) Hydrates at Low Temperatures
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B. Brant Carvalho, Paulo H., Mace, Amber, Nangoi, Inna Martha, Leitão, Alexandre A., Tulk, Chris A., Molaison, Jamie J., Andersson, Ove, Lyubartsev, Alexander P., Häussermann, Ulrich, B. Brant Carvalho, Paulo H., Mace, Amber, Nangoi, Inna Martha, Leitão, Alexandre A., Tulk, Chris A., Molaison, Jamie J., Andersson, Ove, Lyubartsev, Alexander P., and Häussermann, Ulrich
- Abstract
The high pressure structural behavior of H2 and Ne clathrate hydrates with approximate composition H2/Ne·~4H2O and featuring cubic structure II (CS-II) was investigated by neutron powder diffraction using the deuterated analogues at ~95 K. CS-II hydrogen hydrate transforms gradually to isocompositional C1 phase (filled ice II) at around 1.1 GPa but may be metastably retained up to 2.2 GPa. Above 3 GPa a gradual decomposition into C2 phase (H2·H2O, filled ice Ic) and ice VIII’ takes place. Upon heating to 200 K the CS-II to C1 transition completes instantly whereas C1 decomposition appears sluggish also at 200 K. C1 was observed metastably up to 8 GPa. At 95 K C1 and C2 hydrogen hydrate can be retained below 1 GPa and yield ice II and ice Ic, respectively, upon complete release of pressure. In contrast, CS-II neon hydrate undergoes pressure-induced amorphization at 1.9 GPa, thus following the general trend for noble gas clathrate hydrates. Upon heating to 200 K amorphous Ne hydrate crystallizes as a mixture of previously unreported C2 hydrate and ice VIII’.
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- 2022
- Full Text
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26. Characterization of an aged alkali-activated slag roof tile after 30 years of exposure to Northern Scandinavian weather
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Luukkonen, T. (Tero), Yliniemi, J. (Juho), Walkley, B. (Brant), Geddes, D. (Daniel), Griffith, B. (Ben), Hanna, J. V. (John V.), Provis, J. L. (John L.), Kinnunen, P. (Päivö), Illikainen, M. (Mirja), Luukkonen, T. (Tero), Yliniemi, J. (Juho), Walkley, B. (Brant), Geddes, D. (Daniel), Griffith, B. (Ben), Hanna, J. V. (John V.), Provis, J. L. (John L.), Kinnunen, P. (Päivö), and Illikainen, M. (Mirja)
- Abstract
Alkali-activated materials (AAMs) have been known as an alternative cementitious binder in construction for more than 120 years. Several buildings utilizing AAMs were realized in Europe in the 1950s–1980s. During the last 30 years, the interest towards AAMs has been reinvigorated due to the potentially lower CO₂ footprint in comparison to Portland cement. However, one often-raised issue with AAMs is the lack of long-term studies concerning durability in realistic conditions. In the present study, we examined a roof tile, which was prepared from alkali-activated blast furnace slag mortar and exposed to harsh Northern Scandinavian weather conditions in Turku, Finland, for approximately 30 years. Characterization of this roof tile provides unique and crucial information about the changes occurring during AAM lifetime. The results obtained with a suite of analytical techniques indicate that the roof tile had maintained excellent durability properties with little sign of structural disintegration in real-life living lab conditions, and thus provide in part assurance that AAM-based binders can be safely adopted in harsh climates. The phase assemblage and nanostructural characterization results reported here further elucidate the long-term changes occurring in AAMs and provide reference points for accelerated durability tests and thermodynamic modelling.
- Published
- 2022
27. The Romantic Imagination in the Works of Gustavo Adolfo Bécquer
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BYNUM, B. BRANT and BYNUM, B. BRANT
- Published
- 2018
28. Nutritional profile of rodent diets impacts experimental reproducibility in microbiome preclinical research
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Alberto Caminero, David E. Reed, G De Palma, Premysl Bercik, K Takami, B. Brant, Stephanie Vanner, Jane G. Muir, A. Winterborn, Peter R. Gibson, Caroline J Tuck, and Elena F. Verdu
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Male ,0301 basic medicine ,Rodent ,Science ,Gut flora ,Microbiology ,Article ,Mice ,03 medical and health sciences ,Ingredient ,Medical research ,0302 clinical medicine ,RNA, Ribosomal, 16S ,biology.animal ,Animals ,Microbiome ,Food science ,2. Zero hunger ,chemistry.chemical_classification ,Multidisciplinary ,biology ,Microbiota ,Fatty Acids ,Gastroenterology ,Reproducibility of Results ,Fatty acid ,biology.organism_classification ,Gluten ,Diet ,Gastrointestinal Microbiome ,Mice, Inbred C57BL ,Nutrition Assessment ,030104 developmental biology ,chemistry ,Research Design ,Fermentation ,Animal Nutritional Physiological Phenomena ,Medicine ,Female ,030211 gastroenterology & hepatology ,FODMAP - Abstract
The lack of reproducibility of animal experimental results between laboratories, particularly in studies investigating the microbiota, has raised concern among the scientific community. Factors such as environment, stress and sex have been identified as contributors, whereas dietary composition has received less attention. This study firstly evaluated the use of commercially available rodent diets across research institutions, with 28 different diets reported by 45 survey respondents. Secondly, highly variable ingredient, FODMAP (Fermentable Oligo-, Di-, Mono-saccharides And Polyols) and gluten content was found between different commercially available rodent diets. Finally, 40 mice were randomized to four groups, each receiving a different commercially available rodent diet, and the dietary impact on cecal microbiota, short- and branched-chain fatty acid profiles was evaluated. The gut microbiota composition differed significantly between diets and sexes, with significantly different clusters in β-diversity. Total BCFA were highest (p = 0.01) and SCFA were lowest (p = 0.03) in mice fed a diet lower in FODMAPs and gluten. These results suggest that nutritional composition of commercially available rodent diets impact gut microbiota profiles and fermentation patterns, with major implications for the reproducibility of results across laboratories. However, further studies are required to elucidate the specific dietary factors driving these changes.
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- 2020
29. Exploring High-Pressure Transformations in Low-Z (H2, Ne) Hydrates at Low Temperatures
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Paulo H. B. Brant Carvalho, Amber Mace, Inna Martha Nangoi, Alexandre A. Leitão, Chris A. Tulk, Jamie J. Molaison, Ove Andersson, Alexander P. Lyubartsev, and Ulrich Häussermann
- Subjects
Crystallography ,neon hydrate ,neutron diffraction ,QD901-999 ,pressure effects ,Materials Chemistry ,Materialkemi ,Condensed Matter Physics ,clathrate hydrates ,Den kondenserade materiens fysik ,molecular dynamics ,hydrogen hydrate - Abstract
The high pressure structural behavior of H2 and Ne clathrate hydrates with approximate composition H2/Ne·~4H2O and featuring cubic structure II (CS-II) was investigated by neutron powder diffraction using the deuterated analogues at ~95 K. CS-II hydrogen hydrate transforms gradually to isocompositional C1 phase (filled ice II) at around 1.1 GPa but may be metastably retained up to 2.2 GPa. Above 3 GPa a gradual decomposition into C2 phase (H2·H2O, filled ice Ic) and ice VIII’ takes place. Upon heating to 200 K the CS-II to C1 transition completes instantly whereas C1 decomposition appears sluggish also at 200 K. C1 was observed metastably up to 8 GPa. At 95 K C1 and C2 hydrogen hydrate can be retained below 1 GPa and yield ice II and ice Ic, respectively, upon complete release of pressure. In contrast, CS-II neon hydrate undergoes pressure-induced amorphization at 1.9 GPa, thus following the general trend for noble gas clathrate hydrates. Upon heating to 200 K amorphous Ne hydrate crystallizes as a mixture of previously unreported C2 hydrate and ice VIII’.
- Published
- 2022
30. Murine sepsis phenotypes and differential treatment effects in a randomized trial of prompt antibiotics and fluids
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Derek C. Angus, Samantha J. Kerti, Jason Kennedy, Matthew R. Rosengart, Emily B. Brant, John E. Griepentrog, Christopher W. Seymour, Xianghong Zhang, Chung-Chou H. Chang, and Anthony J. Lewis
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Male ,medicine.medical_specialty ,Time Factors ,medicine.drug_class ,Antibiotics ,030204 cardiovascular system & hematology ,Critical Care and Intensive Care Medicine ,Gastroenterology ,Proinflammatory cytokine ,law.invention ,Sepsis ,Cohort Studies ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Randomized controlled trial ,law ,Internal medicine ,Heart rate ,medicine ,Animals ,Animal model ,030212 general & internal medicine ,Cecum ,Ligation ,Analysis of Variance ,business.industry ,Research ,lcsh:Medical emergencies. Critical care. Intensive care. First aid ,lcsh:RC86-88.9 ,Pennsylvania ,medicine.disease ,3. Good health ,Anti-Bacterial Agents ,Mice, Inbred C57BL ,Interleukin 10 ,Disease Models, Animal ,Phenotype ,Cohort ,Biomarker (medicine) ,Fluid Therapy ,business - Abstract
Background Clinical and biologic phenotypes of sepsis are proposed in human studies, yet it is unknown whether prognostic or drug response phenotypes are present in animal models of sepsis. Using a biotelemetry-enhanced, murine cecal ligation and puncture (CLP) model, we determined phenotypes of polymicrobial sepsis prior to physiologic deterioration, and the association between phenotypes and outcome in a randomized trial of prompt or delayed antibiotics and fluids. Methods We performed a secondary analysis of male C57BL/6J mice in two observational cohorts and two randomized, laboratory animal experimental trials. In cohort 1, mice (n = 118) underwent biotelemetry-enhanced CLP, and we applied latent class mixed models to determine optimal number of phenotypes using clinical data collected between injury and physiologic deterioration. In cohort 2 (N = 73 mice), inflammatory cytokines measured at 24 h after deterioration were explored by phenotype. In a subset of 46 mice enrolled in two trials from cohort 1, we tested the association of phenotypes with the response to immediate (0 h) vs. delayed (2 to 4 h) antibiotics or fluids initiated after physiologic deterioration. Results Latent class mixture modeling derived a two-class model in cohort 1. Class 2 (N = 97) demonstrated a shorter time to deterioration (mean SD 7.3 (0.9) vs. 9.7 (3.2) h, p p p = 0.75). In cohort 2 used for biomarker measurement, class 2 mice had greater plasma concentrations of IL6 and IL10 at 24 h after CLP (p = 0.05). In pilot randomized trials, the effects of sepsis treatment (immediate vs. delayed antibiotics) differed by phenotype (p = 0.03), with immediate treatment associated with greater survival in class 2 mice only. Similar differential treatment effect by class was observed in the trial of immediate vs. delayed fluids (p = 0.02). Conclusions We identified two sepsis phenotypes in a murine cecal ligation and puncture model, one of which is characterized by faster deterioration and more severe inflammation. Response to treatment in a randomized trial of immediate versus delayed antibiotics and fluids differed on the basis of phenotype.
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- 2019
31. Exploring High-Pressure Transformations in Low-Z (H2, Ne) Hydrates at Low Temperatures
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Häussermann, Paulo H. B. Brant Carvalho, Amber Mace, Inna Martha Nangoi, Alexandre A. Leitão, Chris A. Tulk, Jamie J. Molaison, Ove Andersson, Alexander P. Lyubartsev, and Ulrich
- Subjects
hydrogen hydrate ,neon hydrate ,pressure effects ,neutron diffraction ,molecular dynamics ,clathrate hydrates - Abstract
The high pressure structural behavior of H2 and Ne clathrate hydrates with approximate composition H2/Ne·~4H2O and featuring cubic structure II (CS-II) was investigated by neutron powder diffraction using the deuterated analogues at ~95 K. CS-II hydrogen hydrate transforms gradually to isocompositional C1 phase (filled ice II) at around 1.1 GPa but may be metastably retained up to 2.2 GPa. Above 3 GPa a gradual decomposition into C2 phase (H2·H2O, filled ice Ic) and ice VIII’ takes place. Upon heating to 200 K the CS-II to C1 transition completes instantly whereas C1 decomposition appears sluggish also at 200 K. C1 was observed metastably up to 8 GPa. At 95 K C1 and C2 hydrogen hydrate can be retained below 1 GPa and yield ice II and ice Ic, respectively, upon complete release of pressure. In contrast, CS-II neon hydrate undergoes pressure-induced amorphization at 1.9 GPa, thus following the general trend for noble gas clathrate hydrates. Upon heating to 200 K amorphous Ne hydrate crystallizes as a mixture of previously unreported C2 hydrate and ice VIII’.
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- 2021
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32. Evidence suggesting kinetic unfreezing of water mobility in two distinct processes in pressure-amorphized clathrate hydrates
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Andersson, Ove, primary, B. Brant Carvalho, Paulo H., additional, Häussermann, Ulrich, additional, and Hsu, Ying-Jui, additional
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- 2022
- Full Text
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33. Developing a shared sepsis data infrastructure: a systematic review and concept map to FHIR
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Emily B, Brant, Jason N, Kennedy, Andrew J, King, Lawrence D, Gerstley, Pranita, Mishra, David, Schlessinger, James, Shalaby, Gabriel J, Escobar, Derek C, Angus, Christopher W, Seymour, and Vincent X, Liu
- Abstract
The development of a shared data infrastructure across health systems could improve research, clinical care, and health policy across a spectrum of diseases, including sepsis. Awareness of the potential value of such infrastructure has been heightened by COVID-19, as the lack of a real-time, interoperable data network impaired disease identification, mitigation, and eradication. The Sepsis on FHIR collaboration establishes a dynamic, federated, and interoperable system of sepsis data from 55 hospitals using 2 distinct inpatient electronic health record systems. Here we report on phase 1, a systematic review to identify clinical variables required to define sepsis and its subtypes to produce a concept mapping of elements onto Fast Healthcare Interoperability Resources (FHIR). Relevant papers described consensus sepsis definitions, provided criteria for sepsis, severe sepsis, septic shock, or detailed sepsis subtypes. Studies not written in English, published prior to 1970, or "grey" literature were prospectively excluded. We analyzed 55 manuscripts yielding 151 unique clinical variables. We then mapped variables to their corresponding US Core FHIR resources and specific code values. This work establishes the framework to develop a flexible infrastructure for sharing sepsis data, highlighting how FHIR could enable the extension of this approach to other important conditions relevant to public health.
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- 2021
34. Revising Host Phenotypes of Sepsis Using Microbiology
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Huiying Zhao, Jason N. Kennedy, Shu Wang, Emily B. Brant, Gordon R. Bernard, Kimberley DeMerle, Chung-Chou H. Chang, Derek C. Angus, and Christopher W. Seymour
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Medicine (General) ,Lung ,business.industry ,phenotype ,Organ dysfunction ,Alpha (ethology) ,General Medicine ,medicine.disease ,Phenotype ,Latent class model ,Microbiology ,Pulmonary function testing ,Log-rank test ,Sepsis ,sepsis ,medicine.anatomical_structure ,R5-920 ,host ,medicine ,latent class analysis ,Medicine ,medicine.symptom ,business ,Original Research ,pathogen - Abstract
Background: There is wide heterogeneity in sepsis in causative pathogens, host response, organ dysfunction, and outcomes. Clinical and biologic phenotypes of sepsis are proposed, but the role of pathogen data on sepsis classification is unknown.Methods: We conducted a secondary analysis of the Recombinant Human Activated Protein C (rhAPC) Worldwide Evaluation in Severe Sepsis (PROWESS) Study. We used latent class analysis (LCA) to identify sepsis phenotypes using, (i) only clinical variables (“host model”) and, (ii) combining clinical with microbiology variables (e.g., site of infection, culture-derived pathogen type, and anti-microbial resistance characteristics, “host-pathogen model”). We describe clinical characteristics, serum biomarkers, and outcomes of host and host-pathogen models. We tested the treatment effects of rhAPC by phenotype using Kaplan-Meier curves.Results: Among 1,690 subjects with severe sepsis, latent class modeling derived a 4-class host model and a 4-class host-pathogen model. In the host model, alpha type (N = 327, 19%) was younger and had less shock; beta type (N=518, 31%) was older with more comorbidities; gamma type (N = 532, 32%) had more pulmonary dysfunction; delta type (N = 313, 19%) had more liver, renal and hematologic dysfunction and shock. After the addition of microbiologic variables, 772 (46%) patients changed phenotype membership, and the median probability of phenotype membership increased from 0.95 to 0.97 (P < 0.01). When microbiology data were added, the contribution of individual variables to phenotypes showed greater change for beta and gamma types. In beta type, the proportion of abdominal infections (from 20 to 40%) increased, while gamma type patients had an increased rate of lung infections (from 50 to 78%) with worsening pulmonary function. Markers of coagulation such as d-dimer and plasminogen activator inhibitor (PAI)-1 were greater in the beta type and lower in the gamma type. The 28 day mortality was significantly different for individual phenotypes in host and host-pathogen models (both P < 0.01). The treatment effect of rhAPC obviously changed in gamma type when microbiology data were added (P-values of log rank test changed from 0.047 to 0.780).Conclusions: Sepsis host phenotype assignment was significantly modified when microbiology data were added to clinical variables, increasing cluster cohesiveness and homogeneity.
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- 2021
35. Structural investigation of three distinct amorphous forms of Ar hydrate
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Paulo H B, Brant Carvalho, Pedro Ivo R, Moraes, Alexandre A, Leitão, Ove, Andersson, Chris A, Tulk, Jamie, Molaison, Alexander P, Lyubartsev, and Ulrich, Häussermann
- Abstract
Three amorphous forms of Ar hydrate were produced using the crystalline clathrate hydrate Ar·6.5H
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- 2021
36. Pressure-induced amorphization of noble gas clathrate hydrates
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Alexander P. Lyubartsev, Alexandre A. Leitão, Inna M. Nangoi, Ove Andersson, Jamie J. Molaison, Christopher A. Tulk, Paulo H. B. Brant Carvalho, Amber Mace, and Ulrich Häussermann
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Diffraction ,Materials science ,Coordination number ,Clathrate hydrate ,Bragg's law ,Noble gas ,02 engineering and technology ,021001 nanoscience & nanotechnology ,Condensed Matter Physics ,01 natural sciences ,Amorphous solid ,Dodecahedron ,Crystallography ,0103 physical sciences ,010306 general physics ,0210 nano-technology ,Hydrate ,Den kondenserade materiens fysik - Abstract
The high-pressure structural behavior of the noble gas (Ng) clathrate hydrates $\mathrm{Ar}\ifmmode\cdot\else\textperiodcentered\fi{}6.5\phantom{\rule{0.16em}{0ex}}{\mathrm{H}}_{2}\mathrm{O}$ and $\mathrm{Xe}\ifmmode\cdot\else\textperiodcentered\fi{}7.2\phantom{\rule{0.16em}{0ex}}{\mathrm{H}}_{2}\mathrm{O}$ featuring cubic structures II and I, respectively, was investigated by neutron powder diffraction (using the deuterated analogues) at 95 K. Both hydrates undergo pressure-induced amorphization (PIA), indicated by the disappearance of Bragg diffraction peaks, but at rather different pressures, at 1.4 and above 4.0 GPa, respectively. Amorphous Ar hydrate can be recovered to ambient pressure when annealed at $g1.5\phantom{\rule{0.16em}{0ex}}\mathrm{GPa}$ and 170 K and is thermally stable up to 120 K. In contrast, it was impossible to retain amorphous Xe hydrate at pressures below 3 GPa. Molecular dynamics (MD) simulations were used to obtain general insight into PIA of Ng hydrates, from Ne to Xe. Without a guest species, both cubic clathrate structures amorphize at 1.2 GPa, which is very similar to hexagonal ice. Filling of large-sized H cages does not provide stability toward amorphization for structure II, whereas filled small-sized dodecahedral D cages shift PIA successively to higher pressures with increasing size of the Ng guest. For structure I, filling of both kinds of cages, large-sized T and small-sized D, acts to stabilize in a cooperative fashion. Xe hydrate represents a special case. In MD, disordering of the guest hydration structure is already seen at around 2.5 GPa. However, the different coordination numbers of the two types of guests in the crystalline cage structure are preserved, and the state is shown to produce a Bragg diffraction pattern. The experimentally observed diffraction up to 4 GPa is attributed to this semicrystalline state.
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- 2021
37. Structural investigation of three distinct amorphous forms of Ar hydrate
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B. Brant Carvalho, Paulo H., Moraes, Pedro Ivo R., Leitão, Alexandre A., Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., Häussermann, Ulrich, B. Brant Carvalho, Paulo H., Moraes, Pedro Ivo R., Leitão, Alexandre A., Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., and Häussermann, Ulrich
- Abstract
Three amorphous forms of Ar hydrate were produced using the crystalline clathrate hydrate Ar·6.5H2O (structure II, Fdm, a ≈ 17.1 Å) as a precursor and structurally characterized by a combination of isotope substitution (36Ar) neutron diffraction and molecular dynamics (MD) simulations. The first form followed from the pressure-induced amorphization of the precursor at 1.5 GPa at 95 K and the second from isobaric annealing at 2 GPa and subsequent cooling back to 95 K. In analogy to amorphous ice, these amorphs are termed high-density amorphous (HDA) and very-high-density amorphous (VHDA), respectively. The third amorph (recovered amorphous, RA) was obtained when recovering VHDA to ambient pressure (at 95 K). The three amorphs have distinctly different structures. In HDA the distinction of the original two crystallographically different Ar guests is maintained as differently dense Ar–water hydration structures, which expresses itself in a split first diffraction peak in the neutron structure factor function. Relaxation of the local water structure during annealing produces a homogeneous hydration environment around Ar, which is accompanied with a densification by about 3%. Upon pressure release the homogeneous amorphous structure undergoes expansion by about 21%. Both VHDA and RA can be considered frozen solutions of immiscible Ar and water in which in average 15 and 11 water molecules, respectively, coordinate Ar out to 4 Å. The local water structures of HDA and VHDA Ar hydrates show some analogy to those of the corresponding amorphous ices, featuring H2O molecules in 5- and 6-fold coordination with neighboring molecules. However, they are considerably less dense. Most similarity is seen between RA and low density amorphous ice (LDA), which both feature strictly 4-coordinated H2O networks. It is inferred that, depending on the kind of clathrate structure and occupancy of cages, amorphous states produ
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- 2021
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38. Pressure-induced amorphization of noble gas clathrate hydrates
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B. Brant Carvalho, Paulo H., Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., Nangoi, Inna M., Leitão, Alexandre A., Häussermann, Ulrich, B. Brant Carvalho, Paulo H., Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., Nangoi, Inna M., Leitão, Alexandre A., and Häussermann, Ulrich
- Abstract
The high-pressure structural behavior of the noble gas (Ng) clathrate hydrates Ar center dot 6.5 H2O and Xe center dot 7.2 H2O featuring cubic structures II and I, respectively, was investigated by neutron powder diffraction (using the deuterated analogues) at 95 K. Both hydrates undergo pressure-induced amorphization (PIA), indicated by the disappearance of Bragg diffraction peaks, but at rather different pressures, at 1.4 and above 4.0 GPa, respectively. Amorphous Ar hydrate can be recovered to ambient pressure when annealed at >1.5 GPa and 170 K and is thermally stable up to 120 K. In contrast, it was impossible to retain amorphous Xe hydrate at pressures below 3 GPa. Molecular dynamics (MD) simulations were used to obtain general insight into PIA of Ng hydrates, from Ne to Xe. Without a guest species, both cubic clathrate structures amorphize at 1.2 GPa, which is very similar to hexagonal ice. Filling of large-sized H cages does not provide stability toward amorphization for structure II, whereas filled small-sized dodecahedral D cages shift PIA successively to higher pressures with increasing size of the Ng guest. For structure I, filling of both kinds of cages, large-sized T and small-sized D, acts to stabilize in a cooperative fashion. Xe hydrate represents a special case. In MD, disordering of the guest hydration structure is already seen at around 2.5 GPa. However, the different coordination numbers of the two types of guests in the crystalline cage structure are preserved, and the state is shown to produce a Bragg diffraction pattern. The experimentally observed diffraction up to 4 GPa is attributed to this semicrystalline state.
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- 2021
- Full Text
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39. Pressure-induced amorphization of noble gas clathrate hydrates
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Carvalho, Paulo H. B. Brant, Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., Nangoi, Inna M., Leitao, Alexandre A., Häussermann, Ulrich, Carvalho, Paulo H. B. Brant, Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Lyubartsev, Alexander P., Nangoi, Inna M., Leitao, Alexandre A., and Häussermann, Ulrich
- Abstract
The high-pressure structural behavior of the noble gas (Ng) clathrate hydrates Ar center dot 6.5 H2O and Xe center dot 7.2 H2O featuring cubic structures II and I, respectively, was investigated by neutron powder diffraction (using the deuterated analogues) at 95 K. Both hydrates undergo pressure-induced amorphization (PIA), indicated by the disappearance of Bragg diffraction peaks, but at rather different pressures, at 1.4 and above 4.0 GPa, respectively. Amorphous Ar hydrate can be recovered to ambient pressure when annealed at >1.5 GPa and 170 K and is thermally stable up to 120 K. In contrast, it was impossible to retain amorphous Xe hydrate at pressures below 3 GPa. Molecular dynamics (MD) simulations were used to obtain general insight into PIA of Ng hydrates, from Ne to Xe. Without a guest species, both cubic clathrate structures amorphize at 1.2 GPa, which is very similar to hexagonal ice. Filling of large-sized H cages does not provide stability toward amorphization for structure II, whereas filled small-sized dodecahedral D cages shift PIA successively to higher pressures with increasing size of the Ng guest. For structure I, filling of both kinds of cages, large-sized T and small-sized D, acts to stabilize in a cooperative fashion. Xe hydrate represents a special case. In MD, disordering of the guest hydration structure is already seen at around 2.5 GPa. However, the different coordination numbers of the two types of guests in the crystalline cage structure are preserved, and the state is shown to produce a Bragg diffraction pattern. The experimentally observed diffraction up to 4 GPa is attributed to this semicrystalline state.
- Published
- 2021
- Full Text
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40. Sepsis subclasses: a framework for development and interpretation
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Derek C. Angus, Nathan I. Shapiro, Hector R. Wong, Ephraim L. Tsalik, Lonneke A. van Vught, Vincent X. Liu, Benjamin Tang, Christopher W. Seymour, J Kenneth Baillie, Robert P. Dickson, Carolyn S. Calfee, Sachin Yende, Joseph A. Carcillo, Huiying Zhao, Julian C. Knight, John C. Marshall, Adrienne G. Randolph, Manu Shankar-Hari, Christopher J. Lindsell, Brendon P. Scicluna, Victor B. Talisa, Tom van der Poll, Kimberley M. DeMerle, Anthony C. Gordon, Chung-Chou H. Chang, Jason Kennedy, B. Taylor Thompson, Idris V R Evans, Emily B. Brant, Timothy E. Sweeney, Center of Experimental and Molecular Medicine, Epidemiology and Data Science, AII - Infectious diseases, Infectious diseases, Intensive Care Medicine, ACS - Diabetes & metabolism, APH - Personalized Medicine, and APH - Health Behaviors & Chronic Diseases
- Subjects
Bedside-Care ,medicine.medical_specialty ,phenotype ,Host response ,MEDLINE ,1110 Nursing ,Critical Care and Intensive Care Medicine ,1117 Public Health and Health Services ,Sepsis ,sepsis ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Intensive care medicine ,Mechanism (biology) ,business.industry ,Interpretation (philosophy) ,Organ dysfunction ,030208 emergency & critical care medicine ,1103 Clinical Sciences ,medicine.disease ,Emergency & Critical Care Medicine ,subclass ,030228 respiratory system ,medicine.symptom ,heterogeneity ,business - Abstract
Sepsis is defined as a dysregulated host response to infection that leads to life-threatening acute organ dysfunction. It afflicts approximately 50 million people worldwide annually and is often deadly, even when evidence-based guidelines are applied promptly. Many randomized trials tested therapies for sepsis over the past 2 decades, but most have not proven beneficial. This may be because sepsis is a heterogeneous syndrome, characterized by a vast set of clinical and biologic features. Combinations of these features, however, may identify previously unrecognized groups, or "subclasses" with different risks of outcome and response to a given treatment. As efforts to identify sepsis subclasses become more common, many unanswered questions and challenges arise. These include: 1) the semantic underpinning of sepsis subclasses, 2) the conceptual goal of subclasses, 3) considerations about study design, data sources, and statistical methods, 4) the role of emerging data types, and 5) how to determine whether subclasses represent "truth." We discuss these challenges and present a framework for the broader study of sepsis subclasses. This framework is intended to aid in the understanding and interpretation of sepsis subclasses, provide a mechanism for explaining subclasses generated by different methodologic approaches, and guide clinicians in how to consider subclasses in bedside care.
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- 2020
41. Community Sepsis in Patients with High Risk for Resistant Organisms: Epidemiology and Outcomes
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Derek C. Angus, Jeremy M. Kahn, Chris Martin-Gill, Donald M. Yealy, Christopher W. Seymour, Clifton W. Callaway, E. Anglin, Emily B. Brant, and Jason Kennedy
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Sepsis ,medicine.medical_specialty ,business.industry ,Epidemiology ,Medicine ,In patient ,business ,Intensive care medicine ,medicine.disease - Published
- 2020
42. Layered Zinc Hydroxide Dihydrate, Zn-5(OH)(10)center dot 2H(2)O, from Hydrothermal Conversion of epsilon-Zn(OH)(2) at Gigapascal Pressures and its Transformation to Nanocrystalline ZnO
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Istvan Zoltan Jenei, Sergei I. Simak, Ying-Jui Hsu, Ove Andersson, Ulrich Häussermann, Paulo H. B. Brant Carvalho, and Alisa Gordeeva
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Oorganisk kemi ,Fabrication ,Materials science ,General Chemical Engineering ,chemistry.chemical_element ,General Chemistry ,Zinc ,Condensed Matter Physics ,Nanocrystalline material ,Hydrothermal circulation ,Article ,Inorganic Chemistry ,Chemistry ,chemistry.chemical_compound ,chemistry ,Zinc hydroxide ,QD1-999 ,Den kondenserade materiens fysik ,Nuclear chemistry - Abstract
Layered zinc hydroxides (LZHs) with the general formula (Zn2+)(x)(OH-)(2x-my ),(A(m-))(y)center dot nH(2)O (A(m-) = Cl- , NO3- , ac(-) , SO42-, etc) are considered as useful precursors for the fabrication of functional ZnO nanostructures. Here, we report the synthesis and structure characterization of the hitherto unknown "binary" representative of the LZH compound family, Zn-5(OH)(10)center dot 2H(2)O, with A(m-) = OH- , x = 5, y = 2, and n = 2. Zn-5(OH)(10)center dot 2H(2)O was afforded quantitatively by pressurizing mixtures of epsilon-Zn(OH)(2) (wulfingite) and water to 1-2 GPa and applying slightly elevated temperatures, 100-200 degrees C. The monoclinic crystal structure was characterized from powder X-ray diffraction data (space group C2/c, a = 15.342(7) angstrom, b = 6.244(6) angstrom, c = 10.989(7) angstrom, beta = 100.86(1)degrees). It features neutral zinc hydroxide layers, composed of octahedrally and tetrahedrally coordinated Zn ions with a 3:2 ratio, in which H2O is intercalated. The interlayer d(200) distance is 7.53 angstrom. The H-bond structure of Zn-5(OH)(10)center dot 2H(2)O was analyzed by a combination of infrared/Raman spectroscopy, computational modeling, and neutron powder diffraction. Interlayer H2O molecules are strongly H-bonded to five surrounding OH groups and appear orientationally disordered. The decomposition of Zn-5(OH)(10)center dot 2H(2)O, which occurs thermally between 70 and 100 degrees C, was followed in an in situ transmission electron microscopy study and ex situ annealing experiments. It yields initially 5-15 nm sized hexagonal w-ZnO crystals, which, depending on the conditions, may intergrow to several hundred nm-large two-dimensional, flakelike crystals within the boundary of original Zn-5(OH)(10)center dot 2H(2)O particles. Funding Agencies|Swedish Research Council (VR)Swedish Research Council [2016-04413, 2019-05551]; Stiftelsen Olle Engkvist Byggmastare (SOEB); Swedish Foundation for Strategic Research (SSF) within the Swedish National Graduate School in neutron scattering (SwedNess); Swedish Government Strategic Research Area Grant in Materials Science on Functional Materials at Linkoping University (Faculty Grant SFO-Mat-LiU) [2009 00971]
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- 2020
43. Layered Zinc Hydroxide Dihydrate, Zn5(OH)10·2H2O, from Hydrothermal Conversion of ε-Zn(OH)2 at Gigapascal Pressures and its Transformation to Nanocrystalline ZnO
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Gordeeva, Alisa, Hsu, Ying-Jui, Jenei, Istvan Z., Carvalho, Paulo H. B. Brant, Simak, Sergei, I, Andersson, Ove, Haussermann, Ulrich, Gordeeva, Alisa, Hsu, Ying-Jui, Jenei, Istvan Z., Carvalho, Paulo H. B. Brant, Simak, Sergei, I, Andersson, Ove, and Haussermann, Ulrich
- Abstract
Layered zinc hydroxides (LZHs) with the general formula (Zn2+)x(OH–)2x−my(Am–)y·nH2O (Am– = Cl–, NO3–, ac–, SO42–, etc) are considered as useful precursors for the fabrication of functional ZnO nanostructures. Here, we report the synthesis and structure characterization of the hitherto unknown “binary” representative of the LZH compound family, Zn5(OH)10·2H2O, with Am– = OH–, x = 5, y = 2, and n = 2. Zn5(OH)10·2H2O was afforded quantitatively by pressurizing mixtures of ε-Zn(OH)2 (wulfingite) and water to 1–2 GPa and applying slightly elevated temperatures, 100–200 °C. The monoclinic crystal structure was characterized from powder X-ray diffraction data (space group C2/c, a = 15.342(7) Å, b = 6.244(6) Å, c = 10.989(7) Å, β = 100.86(1)°). It features neutral zinc hydroxide layers, composed of octahedrally and tetrahedrally coordinated Zn ions with a 3:2 ratio, in which H2O is intercalated. The interlayer d(200) distance is 7.53 Å. The H-bond structure of Zn5(OH)10·2H2O was analyzed by a combination of infrared/Raman spectroscopy, computational modeling, and neutron powder diffraction. Interlayer H2O molecules are strongly H-bonded to five surrounding OH groups and appear orientationally disordered. The decomposition of Zn5(OH)10·2H2O, which occurs thermally between 70 and 100 °C, was followed in an in situ transmission electron microscopy study and ex situ annealing experiments. It yields initially 5–15 nm sized hexagonal w-ZnO crystals, which, depending on the conditions, may intergrow to several hundred nm-large two-dimensional, flakelike crystals within the boundary of original Zn5(OH)10·2H2O particles.
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- 2020
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44. Elucidating the guest disorder in structure II argon hydrate - A neutron diffraction isotopic substitution study
- Author
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Carvalho, Paulo H. B. Brant, Amber, Mace, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Häussermann, Ulrich, Carvalho, Paulo H. B. Brant, Amber, Mace, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, and Häussermann, Ulrich
- Abstract
Clathrate hydrates with the cubic structure II (CS-II) form typically with large guest molecules, such as tetrahydrofuran, trimethylamine oxide, or propane. However, CS-II is also realized for argon hydrate despite the comparatively small van der Waals diameter of the guest (around 3.8 angstrom). Here, the structure of deuterated argon hydrate was studied at ambient pressure in the temperature range 20-95 K using neutron diffraction and comparing natural Ar with Ar-36, which scatters neutrons more than 13 times more efficiently. The procedure allowed to unambiguously establish the positional disorder within the large cages of CS-H, while simultaneously refining host and guest structures. These cages are singly occupied and off-centered argon atoms distribute on two tetrahedron-shaped split positions with a ratio 3:1. Molecular dynamics (MD) simulations revealed that the crystallographic positional disorder structure is due to mobile argon atoms even at 20 K. The MD potential energy distribution confirmed the diffraction model. It is noted that the unit cell volumes of argon hydrate in the investigated temperature range are virtually identical to N-2 hydrate, which has a similar composition at ambient pressure, indicating a very similar (slightly attractive) host-guest interaction.
- Published
- 2020
- Full Text
- View/download PDF
45. Elucidating the guest disorder in structure II argon hydrate - A neutron diffraction isotopic substitution study
- Author
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B. Brant Carvalho, Paulo H., Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, Häussermann, Ulrich, B. Brant Carvalho, Paulo H., Mace, Amber, Andersson, Ove, Tulk, Chris A., Molaison, Jamie, and Häussermann, Ulrich
- Abstract
Clathrate hydrates with the cubic structure II (CS-II) form typically with large guest molecules, such as tetrahydrofuran, trimethylamine oxide, or propane. However, CS-II is also realized for argon hydrate despite the comparatively small van der Waals diameter of the guest (around 3.8 angstrom). Here, the structure of deuterated argon hydrate was studied at ambient pressure in the temperature range 20-95 K using neutron diffraction and comparing natural Ar with Ar-36, which scatters neutrons more than 13 times more efficiently. The procedure allowed to unambiguously establish the positional disorder within the large cages of CS-H, while simultaneously refining host and guest structures. These cages are singly occupied and off-centered argon atoms distribute on two tetrahedron-shaped split positions with a ratio 3:1. Molecular dynamics (MD) simulations revealed that the crystallographic positional disorder structure is due to mobile argon atoms even at 20 K. The MD potential energy distribution confirmed the diffraction model. It is noted that the unit cell volumes of argon hydrate in the investigated temperature range are virtually identical to N-2 hydrate, which has a similar composition at ambient pressure, indicating a very similar (slightly attractive) host-guest interaction.
- Published
- 2020
- Full Text
- View/download PDF
46. Guiding Resuscitation in the Emergency Department
- Author
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Matthew Niehaus, Aaron B. Skolnik, Christopher K. Schott, Emily B. Brant, Alexander Kobzik, Bachar Hamade, and Nicholas Goodmanson
- Subjects
03 medical and health sciences ,Resuscitation ,0302 clinical medicine ,business.industry ,Emergency Medicine ,medicine ,030208 emergency & critical care medicine ,030212 general & internal medicine ,Medical emergency ,Emergency department ,medicine.disease ,business - Published
- 2018
47. Activated Phosphoinositide 3-Kinase/AKT/mTOR Signaling Confers Resistance to Tumor Treating Fields (TTFields)
- Author
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Tali Voloshin, A. Volodin, B. Brant, L. Koren, R. Paz, K. Wainer-Katsir, E. Zemer-Tov, B. Koltun, Uri Weinberg, Moshe Giladi, Yoram Palti, and A. Klein-Goldberg
- Subjects
Cancer Research ,Cell signaling ,Radiation ,Combination therapy ,business.industry ,Cell ,medicine.disease ,medicine.anatomical_structure ,Oncology ,Apoptosis ,Glioma ,Cancer cell ,medicine ,Cancer research ,Radiology, Nuclear Medicine and imaging ,business ,Protein kinase B ,PI3K/AKT/mTOR pathway - Abstract
Purpose/Objective(s) Tumor Treating Fields (TTFields) therapy is a clinically applied loco-regional, non-invasive, anti-mitotic treatment modality delivering to the tumor low intensity (1-3 V/cm) alternating electric fields (100-300 kHz). While TTFields therapy has demonstrated proven efficacy in management of glioblastoma and malignant pleural mesothelioma, tumor recurrence still occurs in some patients. In order to anticipate potential molecular mechanisms of resistance to TTFields, we developed TTFields-resistant cancer cell lines, and analyzed the changes in their signaling pathways. We also examined the in vitro efficacy of TTFields when combined with agents targeting the molecular candidates that possibly confer resistance to TTFields. Materials/Methods To evaluate the mechanisms of cellular resistance to TTFields, we developed resistant ovarian (A2780), glioma (U-87-MG), and non-small cell lung carcinoma (H1299) cancer cell lines through continued long-term application of TTFields (one or two weeks, depending on the cell line), without treatment breaks. We then assessed the concomitant changes in cellular signaling pathways using an immunoassay followed by Western blot analysis. Finally, we characterized the mechanism of resistance by examining the in vitro efficacy of continued long-term application of TTFields in combination with pharmacological inhibitors including a PI3K/mTOR dual inhibitor (BGT226), and Pan- and isoform-specific inhibitors of PI3K (alpelisib, pictilisib, and BKM120), using cell count, apoptosis, and colony formation assays. Results Continued long-term application of TTFields resulted in reduced sensitivity to TTFields in all tested cell lines. Immunoassay and Western blot analysis showed significant activation of the PI3K/AKT/mTOR signaling pathway in response to TTFields treatment. The combination therapy of TTFields with either alpelisib, pictilisib, BKM120 or BGT226, inhibited AKT S473 phosphorylation and sensitized cancer cells to “long-term” TTFields application. Conclusion Our study demonstrates that the PI3K/ AKT/ mTOR signaling pathway confers resistance to TTFields. This provides a rationale for the combined targeting of PI3K in patients treated with TTFields.
- Published
- 2021
48. Prehospital identification of community sepsis using biomarkers of host response
- Author
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Emily B. Brant, Christian Martin-Gill, Derek C. Angus, Christopher W. Seymour, and Clifton W. Callaway
- Subjects
Emergency Medical Services ,medicine.medical_specialty ,business.industry ,Pain medicine ,Host response ,Critical Care and Intensive Care Medicine ,medicine.disease ,Article ,Sepsis ,Anesthesiology ,medicine ,Humans ,Identification (biology) ,business ,Intensive care medicine ,Biomarkers - Published
- 2020
49. Association between intravenous fluid bolus and biomarker trajectory during prehospital care
- Author
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Derek C. Angus, Clifton W. Callaway, Jeremy M. Kahn, Emily B. Brant, Octavia M. Peck Palmer, Vanessa M. Jackson, Jason Kennedy, Christopher W. Seymour, Donald M. Yealy, and Christian Martin-Gill
- Subjects
Adult ,Male ,medicine.medical_specialty ,Emergency Medical Services ,Resuscitation ,030204 cardiovascular system & hematology ,Emergency Nursing ,Sensitivity and Specificity ,Article ,Acute illness ,Sepsis ,03 medical and health sciences ,0302 clinical medicine ,Intravenous fluid ,Bolus (medicine) ,medicine ,Humans ,Prospective Studies ,Infusions, Intravenous ,Aged ,business.industry ,Interleukin-6 ,Tumor Necrosis Factor-alpha ,030208 emergency & critical care medicine ,Middle Aged ,medicine.disease ,Interleukin-10 ,Direct Treatment ,Emergency medicine ,Injections, Intravenous ,Emergency Medicine ,Biomarker (medicine) ,Fluid Therapy ,Female ,business ,Emergency Service, Hospital ,Biomarkers - Abstract
Background: Patients with acute illness who receive intravenous (IV) fluids prior to hospital arrival may have a lower in-hospital mortality. To better understand whether this is a direct treatment effect or epiphenomenon of downstream care, we tested the association between a prehospital fluid bolus and the change in inflammatory cytokines measured at prehospital and emergency department timepoints in a sample of non-trauma, non-cardiac arrest patients at risk for critical illness. Methods: In a prospective cohort study, we screened 4,013 non-trauma, non-cardiac arrest encounters transported by City of Pittsburgh Emergency Medical Services (EMS) to 2 hospitals from August 2013 to February 2014. In 345 patients, we measured prehospital biomarkers (IL-6, IL-10, and TNF) at 2 time points: the time of prehospital IV access placement by EMS and at ED arrival. We determined the relative change for marker X as: ([XED – XEMS]/XEMS). We determined the risk-adjusted association between prehospital IV fluid bolus and relative change for each marker using multivariable linear regression. Results: Among 345 patients, 88 (26%) received a prehospital IV fluid bolus and 257 (74%) did not. Compared to patients who did not receive prehospital fluids, median prehospital IL-6 was greater initially in subjects receiving a prehospital IV fluid bolus (22.3 [IQR 6.4–113] vs. 11.5 [IQR 5.5–47.6]). Prehospital IL-10 and TNF were similar in both groups (IL-10: 3.5 [IQR 2.2–25.6] vs. 3.0 [IQR 1.9–9.0]; TNF: 7.5 [IQR 6.4–10.4] vs. 6.9 [IQR 6.0–8.3]). After adjustment for demographics, illness severity, and prehospital transport time, we observed a relative decrease in IL-6 at hospital arrival in those receiving a prehospital fluid bolus (adjusted β = −10.0, 95% CI: −19.4, −0.6, p = 0.04), but we did not detect a significant change in IL-10 (p = 0.34) or TNF (p = 0.53). Conclusions: Among non-trauma, non-cardiac arrest patients at risk for critical illness, a prehospital IV fluid bolus was associated with a relative decrease in IL-6, but not IL-10 or TNF.
- Published
- 2019
50. Elucidation of the pressure induced amorphization of tetrahydrofuran clathrate hydrate
- Author
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Paulo H B, Brant Carvalho, Amber, Mace, Craig L, Bull, Nicholas P, Funnell, Chris A, Tulk, Ove, Andersson, and Ulrich, Häussermann
- Abstract
The type II clathrate hydrate (CH) THF·17 H
- Published
- 2019
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