68 results on '"Ayscough KR"'
Search Results
2. Cryo-EM reconstruction of yeast ADP-actin filament at 2.5 Å resolution. A comparison with vertebrate F-actin.
- Author
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Stevenson SR, Tzokov SB, Lahiri I, Ayscough KR, and Bullough PA
- Subjects
- Animals, Binding Sites, Actin Cytoskeleton metabolism, Actin Cytoskeleton chemistry, Saccharomyces cerevisiae Proteins chemistry, Saccharomyces cerevisiae Proteins metabolism, Protein Binding, Adenosine Diphosphate metabolism, Adenosine Diphosphate chemistry, Adenosine Diphosphate analogs & derivatives, Hydrogen Bonding, Actins metabolism, Actins chemistry, Cryoelectron Microscopy, Models, Molecular, Saccharomyces cerevisiae metabolism
- Abstract
The core component of the actin cytoskeleton is the globular protein G-actin, which reversibly polymerizes into filaments (F-actin). Budding yeast possesses a single actin that shares 87%-89% sequence identity with vertebrate actin isoforms. Previous structural studies indicate very close overlap of main-chain backbones. Intriguingly, however, substitution of yeast ACT1 with vertebrate β-cytoplasmic actin severely disrupts cell function and the substitution with a skeletal muscle isoform is lethal. Here we report a 2.5 Å structure of budding yeast F-actin. Previously unresolved side-chain information allows us to highlight four main differences in the comparison of yeast and vertebrate ADP F-actins: a more open nucleotide binding pocket; a more solvent exposed C-terminus; a rearrangement of inter-subunit binding interactions in the vicinity of the D loop and changes in the hydrogen bonding network in the vicinity of histidine 73 (yeast actin) and methyl-histidine 73 (vertebrate actin)., Competing Interests: Declaration of interests The authors declare no competing interests., (Copyright © 2024 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2025
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3. Spatiotemporal regulation of organelle transport by spindle position checkpoint kinase Kin4.
- Author
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Ekal L, Alqahtani AMS, Ayscough KR, and Hettema EH
- Subjects
- Vacuoles metabolism, Biological Transport, Organelles metabolism, Peroxisomes metabolism, Protein Serine-Threonine Kinases metabolism, Protein Serine-Threonine Kinases genetics, p21-Activated Kinases metabolism, p21-Activated Kinases genetics, Ubiquitin-Protein Ligases metabolism, Ubiquitin-Protein Ligases genetics, Receptors, Cell Surface, Vesicular Transport Proteins, Saccharomyces cerevisiae Proteins metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae metabolism
- Abstract
Asymmetric cell division in Saccharomyces cerevisiae involves class V myosin-dependent transport of organelles along the polarised actin cytoskeleton to the emerging bud. Vac17 is the vacuole/lysosome-specific myosin receptor. Its timely breakdown terminates transport and results in the proper positioning of vacuoles in the bud. Vac17 breakdown is controlled by the bud-concentrated p21-activated kinase Cla4, and the E3-ubiquitin ligase Dma1. We found that the spindle position checkpoint kinase Kin4 and, to a lesser extent, its paralog Frk1 contribute to successful vacuole transport by preventing the premature breakdown of Vac17 by Cla4 and Dma1. Furthermore, Kin4 and Cla4 contribute to the regulation of peroxisome transport. We conclude that Kin4 antagonises the Cla4/Dma1 pathway to coordinate spatiotemporal regulation of organelle transport., Competing Interests: Competing interests The authors declare no competing or financial interests., (© 2024. Published by The Company of Biologists Ltd.)
- Published
- 2024
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4. Spindle Position Checkpoint Kinase Kin4 Regulates Organelle Transport in Saccharomyces cerevisiae .
- Author
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Ekal L, Alqahtani AMS, Schuldiner M, Zalckvar E, Hettema EH, and Ayscough KR
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- Protein Serine-Threonine Kinases metabolism, Protein Kinases metabolism, Actomyosin metabolism, Mitosis, Spindle Apparatus metabolism, Organelles, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Membrane-bound organelles play important, frequently essential, roles in cellular metabolism in eukaryotes. Hence, cells have evolved molecular mechanisms to closely monitor organelle dynamics and maintenance. The actin cytoskeleton plays a vital role in organelle transport and positioning across all eukaryotes. Studies in the budding yeast Saccharomyces cerevisiae ( S . cerevisiae ) revealed that a block in actomyosin-dependent transport affects organelle inheritance to daughter cells. Indeed, class V Myosins, Myo2, and Myo4, and many of their organelle receptors, have been identified as key factors in organelle inheritance. However, the spatiotemporal regulation of yeast organelle transport remains poorly understood. Using peroxisome inheritance as a proxy to study actomyosin-based organelle transport, we performed an automated genome-wide genetic screen in S. cerevisiae . We report that the spindle position checkpoint (SPOC) kinase Kin4 and, to a lesser extent, its paralog Frk1, regulates peroxisome transport, independent of their role in the SPOC. We show that Kin4 requires its kinase activity to function and that both Kin4 and Frk1 protect Inp2, the peroxisomal Myo2 receptor, from degradation in mother cells. In addition, vacuole inheritance is also affected in kin4 / frk1 -deficient cells, suggesting a common regulatory mechanism for actin-based transport for these two organelles in yeast. More broadly our findings have implications for understanding actomyosin-based transport in cells.
- Published
- 2023
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5. The dynamin Vps1 mediates Atg9 transport to the sites of autophagosome formation.
- Author
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Arlt H, Raman B, Filali-Mouncef Y, Hu Y, Leytens A, Hardenberg R, Guimarães R, Kriegenburg F, Mari M, Smaczynska-de Rooij II, Ayscough KR, Dengjel J, Ungermann C, and Reggiori F
- Subjects
- Humans, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae metabolism, Dynamins metabolism, Vacuoles metabolism, Autophagy, Autophagy-Related Proteins genetics, Autophagy-Related Proteins metabolism, Protein Transport, GTP-Binding Proteins metabolism, Vesicular Transport Proteins genetics, Vesicular Transport Proteins metabolism, Membrane Proteins metabolism, Autophagosomes metabolism, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Autophagy is a key process in eukaryotes to maintain cellular homeostasis by delivering cellular components to lysosomes/vacuoles for degradation and reuse of the resulting metabolites. Membrane rearrangements and trafficking events are mediated by the core machinery of autophagy-related (Atg) proteins, which carry out a variety of functions. How Atg9, a lipid scramblase and the only conserved transmembrane protein within this core Atg machinery, is trafficked during autophagy remained largely unclear. Here, we addressed this question in yeast Saccharomyces cerevisiae and found that retromer complex and dynamin Vps1 mutants alter Atg9 subcellular distribution and severely impair the autophagic flux by affecting two separate autophagy steps. We provide evidence that Vps1 interacts with Atg9 at Atg9 reservoirs. In the absence of Vps1, Atg9 fails to reach the sites of autophagosome formation, and this results in an autophagy defect. The function of Vps1 in autophagy requires its GTPase activity. Moreover, Vps1 point mutants associated with human diseases such as microcytic anemia and Charcot-Marie-Tooth are unable to sustain autophagy and affect Atg9 trafficking. Together, our data provide novel insights on the role of dynamins in Atg9 trafficking and suggest that a defect in this autophagy step could contribute to severe human pathologies., Competing Interests: Conflict of interest The authors declare no conflicts of interest in regard to this article., (Copyright © 2023 The Authors. Published by Elsevier Inc. All rights reserved.)
- Published
- 2023
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6. A Ruthenium(II) Polypyridyl Complex Disrupts Actin Cytoskeleton Assembly and Blocks Cytokinesis.
- Author
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Gill MR, Jarman PJ, Hearnden V, Fairbanks SD, Bassetto M, Maib H, Palmer J, Ayscough KR, Thomas JA, and Smythe C
- Abstract
The dinuclear Ru
II complex [(Ru(phen)2 )2 (tpphz)]4+ (phen=1,10-phenanthroline, tpphz=tetrapyridophenazine) "RuRuPhen" blocks the transformation of G-actin monomers to F-actin filaments with no disassembly of pre-formed F-actin. Molecular docking studies indicate multiple RuRuPhen molecules bind to the surface of G-actin but not the binding pockets of established actin polymerisation inhibitors. In cells, addition of RuRuPhen causes rapid disruption to actin stress fibre organisation, compromising actomyosin contractility and cell motility; due to this effect RuRuPhen interferes with late-stage cytokinesis. Immunofluorescent microscopy reveals that RuRuPhen causes cytokinetic abscission failure by interfering with endosomal sorting complexes required for transport (ESCRT) complex recruitment., Competing Interests: The authors declare no conflict of interest., (© 2022 The Authors. Angewandte Chemie published by Wiley-VCH GmbH.)- Published
- 2022
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7. Phosphorylation of the WH2 domain in yeast Las17/WASP regulates G-actin binding and protein function during endocytosis.
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Tyler JJ, Smaczynska-de Rooij II, Abugharsa L, Palmer JS, Hancock LP, Allwood EG, and Ayscough KR
- Subjects
- Amino Acid Sequence, Mutation, Phosphorylation, Polymerization, Protein Binding, Saccharomyces cerevisiae Proteins chemistry, Saccharomyces cerevisiae Proteins genetics, Sequence Homology, Amino Acid, Wiskott-Aldrich Syndrome Protein chemistry, Wiskott-Aldrich Syndrome Protein genetics, Actins metabolism, Endocytosis, Protein Domains, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Wiskott-Aldrich Syndrome Protein metabolism
- Abstract
Actin nucleation is the key rate limiting step in the process of actin polymerization, and tight regulation of this process is critical to ensure actin filaments form only at specific times and at defined regions of the cell. WH2 domains are short sequence motifs found in many different actin binding proteins including WASP family proteins which regulate the actin nucleating complex Arp2/3. In this study we reveal a phosphorylation site, Serine 554, within the WH2 domain of the yeast WASP homologue Las17. Both phosphorylation and a phospho-mimetic mutation reduce actin monomer binding affinity while an alanine mutation, generated to mimic the non-phosphorylated state, increases actin binding affinity. The effect of these mutations on the Las17-dependent process of endocytosis in vivo was analysed and leads us to propose that switching of Las17 phosphorylation states may allow progression through distinct phases of endocytosis from site assembly through to the final scission stage. While the study is focused on Las17, the sole WASP family protein in yeast, our results have broad implications for our understanding of how a key residue in this conserved motif can underpin the many different actin regulatory roles with which WH2 domains have been associated.
- Published
- 2021
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8. The Pex3-Inp1 complex tethers yeast peroxisomes to the plasma membrane.
- Author
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Hulmes GE, Hutchinson JD, Dahan N, Nuttall JM, Allwood EG, Ayscough KR, and Hettema EH
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- Amino Acid Sequence genetics, Cell Membrane genetics, Phosphatidylinositols genetics, Protein Binding genetics, Saccharomyces cerevisiae genetics, Membrane Proteins genetics, Multiprotein Complexes genetics, Peroxins genetics, Peroxisomes genetics, Saccharomyces cerevisiae Proteins genetics
- Abstract
A subset of peroxisomes is retained at the mother cell cortex by the Pex3-Inp1 complex. We identify Inp1 as the first known plasma membrane-peroxisome (PM-PER) tether by demonstrating that Inp1 meets the predefined criteria that a contact site tether protein must adhere to. We show that Inp1 is present in the correct subcellular location to interact with both the plasma membrane and peroxisomal membrane and has the structural and functional capacity to be a PM-PER tether. Additionally, expression of artificial PM-PER tethers is sufficient to restore retention in inp1Δ cells. We show that Inp1 mediates peroxisome retention via an N-terminal domain that binds PI(4,5)P2 and a C-terminal Pex3-binding domain, forming a bridge between the peroxisomal membrane and the plasma membrane. We provide the first molecular characterization of the PM-PER tether and show it anchors peroxisomes at the mother cell cortex, suggesting a new model for peroxisome retention., (© 2020 Hulmes et al.)
- Published
- 2020
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9. Mutation of key lysine residues in the Insert B region of the yeast dynamin Vps1 disrupts lipid binding and causes defects in endocytosis.
- Author
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Smaczynska-de Rooij II, Marklew CJ, Palmer SE, Allwood EG, and Ayscough KR
- Subjects
- Amino Acid Sequence, Endosomes metabolism, GTP-Binding Proteins metabolism, Golgi Apparatus metabolism, Golgi Apparatus pathology, Lysine metabolism, Protein Transport, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae growth & development, Sequence Homology, Vacuoles metabolism, Vacuoles pathology, Vesicular Transport Proteins metabolism, Endocytosis, Endosomes pathology, GTP-Binding Proteins genetics, Lipids physiology, Lysine genetics, Mutation, Saccharomyces cerevisiae metabolism, Vesicular Transport Proteins genetics
- Abstract
The yeast dynamin-like protein Vps1 has roles at multiple stages of membrane trafficking including Golgi to vacuole transport, endosomal recycling, endocytosis and in peroxisomal fission. While the majority of the Vps1 amino acid sequence shows a high level of identity with the classical mammalian dynamins, it does not contain a pleckstrin homology domain (PH domain). The Dyn1 PH domain has been shown to bind to lipids with a preference for PI(4,5)P2 and it is considered central to the function of Dyn1 in endocytosis. The lack of a PH domain in Vps1 has raised questions as to whether the protein can function directly in membrane fusion or fission events. Here we demonstrate that the region Insert B, located in a position equivalent to the dynamin PH domain, is able to bind directly to lipids and that mutation of three lysine residues reduces its capacity to interact with lipids, and in particular with PI(4,5)P2. The Vps1 KKK-AAA mutant shows more diffuse staining but does still show some localization to compartments adjacent to vacuoles and to endocytic sites suggesting that other factors are also involved in its recruitment. This mutant selectively blocks endocytosis, but is functional in other processes tested. While mutant Vps1 can localise to endocytic sites, the mutation results in a significant increase in the lifetime of the endocytic reporter Sla2 and a high proportion of defective scission events. Together our data indicate that the lipid binding capacity of the Insert B region of Vps1 contributes to the ability of the protein to associate with membranes and that its capacity to interact with PI(4,5)P2 is important in facilitating endocytic scission., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2019
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10. AP-2-Dependent Endocytic Recycling of the Chitin Synthase Chs3 Regulates Polarized Growth in Candida albicans.
- Author
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Knafler HC, Smaczynska-de Rooij II, Walker LA, Lee KK, Gow NAR, and Ayscough KR
- Subjects
- Candida albicans enzymology, Hyphae enzymology, Hyphae growth & development, Hyphae metabolism, Adaptor Protein Complex 2 metabolism, Candida albicans growth & development, Candida albicans metabolism, Chitin Synthase metabolism, Endocytosis
- Abstract
The human fungal pathogen Candida albicans is known to require endocytosis to enable its adaptation to diverse niches and to maintain its highly polarized hyphal growth phase. While studies have identified changes in transcription leading to the synthesis and secretion of new proteins to facilitate hyphal growth, effective maintenance of hyphae also requires concomitant removal or relocalization of other cell surface molecules. The key molecules which must be removed from the cell surface, and the mechanisms behind this, have, however, remained elusive. In this study, we show that the AP-2 endocytic adaptor complex is required for the internalization of the major cell wall biosynthesis enzyme Chs3. We demonstrate that this interaction is mediated by the AP-2 mu subunit (Apm4) YXXΦ binding domain. We also show that in the absence of Chs3 recycling via AP-2, cells have abnormal cell wall composition, defective polarized cell wall deposition, and morphological defects. The study also highlights key distinctions between endocytic requirements of growth at yeast buds compared to that at hyphal tips and different requirements of AP-2 in maintaining the polarity of mannosylated proteins and ergosterol at hyphal tips. Together, our findings highlight the importance of correct cell wall deposition in cell shape maintenance and polarized growth and the key regulatory role of endocytic recycling via the AP-2 complex. IMPORTANCE Candida albicans is a human commensal yeast that can cause significant morbidity and mortality in immunocompromised individuals. Within humans, C. albicans can adopt different morphologies as yeast or filamentous hyphae and can occupy different niches with distinct temperatures, pHs, CO
2 levels, and nutrient availability. Both morphological switching and growth in different environments require cell surface remodelling, which involves both the addition of newly synthesized proteins as well as the removal of other proteins. In our study, we demonstrate the importance of an adaptor complex AP-2 in internalizing and recycling a specific cell surface enzyme to maintain effective polarized hyphal growth. Defects in formation of the complex or in its ability to interact directly with cargo inhibit enzyme uptake and lead to defective cell walls and aberrant hyphal morphology. Our data indicate that the AP-2 adaptor plays a central role in regulating cell surface composition in Candida ., (Copyright © 2019 Knafler et al.)- Published
- 2019
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11. Yeast-model-based study identified myosin- and calcium-dependent calmodulin signalling as a potential target for drug intervention in chorea-acanthocytosis.
- Author
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Soczewka P, Kolakowski D, Smaczynska-de Rooij I, Rzepnikowska W, Ayscough KR, Kaminska J, and Zoladek T
- Subjects
- Actin Cytoskeleton drug effects, Actin Cytoskeleton metabolism, Alleles, Amino Acid Substitution, Calcineurin metabolism, Canavanine pharmacology, Cell Membrane drug effects, Cell Membrane metabolism, Endocytosis drug effects, Genes, Suppressor, Mutation genetics, Protein Domains, Saccharomyces cerevisiae growth & development, Saccharomyces cerevisiae Proteins metabolism, Sodium Dodecyl Sulfate, Transcription, Genetic drug effects, Vacuoles metabolism, Calcium metabolism, Calcium Signaling drug effects, Calmodulin metabolism, Models, Biological, Myosins metabolism, Neuroacanthocytosis drug therapy, Neuroacanthocytosis metabolism, Saccharomyces cerevisiae metabolism
- Abstract
Chorea-acanthocytosis (ChAc) is a rare neurodegenerative disease associated with mutations in the human VPS13A gene. The mechanism of ChAc pathogenesis is unclear. A simple yeast model was used to investigate the function of the single yeast VSP13 orthologue, Vps13. Vps13, like human VPS13A, is involved in vesicular protein transport, actin cytoskeleton organisation and phospholipid metabolism. A newly identified phenotype of the vps13 Δ mutant, sodium dodecyl sulphate (SDS) hypersensitivity, was used to screen a yeast genomic library for multicopy suppressors. A fragment of the MYO3 gene, encoding Myo3-N (the N-terminal part of myosin, a protein involved in the actin cytoskeleton and in endocytosis), was isolated. Myo3-N protein contains a motor head domain and a linker. The linker contains IQ motifs that mediate the binding of calmodulin, a negative regulator of myosin function. Amino acid substitutions that disrupt the interaction of Myo3-N with calmodulin resulted in the loss of vps13 Δ suppression. Production of Myo3-N downregulated the activity of calcineurin, a protein phosphatase regulated by calmodulin, and alleviated some defects in early endocytosis events. Importantly, ethylene glycol tetraacetic acid (EGTA), which sequesters calcium and thus downregulates calmodulin and calcineurin, was a potent suppressor of vps13 Δ. We propose that Myo3-N acts by sequestering calmodulin, downregulating calcineurin and increasing activity of Myo3, which is involved in endocytosis and, together with Osh2/3 proteins, functions in endoplasmic reticulum-plasma membrane contact sites. These results show that defects associated with vps13 Δ could be overcome, and point to a functional connection between Vps13 and calcium signalling as a possible target for chemical intervention in ChAc. Yeast ChAc models may uncover the underlying pathological mechanisms, and may also serve as a platform for drug testing.This article has an associated First Person interview with the first author of the paper., Competing Interests: Competing interestsThe authors declare no competing or financial interests., (© 2019. Published by The Company of Biologists Ltd.)
- Published
- 2019
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12. Disruption of the plant-specific CFS1 gene impairs autophagosome turnover and triggers EDS1-dependent cell death.
- Author
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Sutipatanasomboon A, Herberth S, Alwood EG, Häweker H, Müller B, Shahriari M, Zienert AY, Marin B, Robatzek S, Praefcke GJK, Ayscough KR, Hülskamp M, and Schellmann S
- Subjects
- Alleles, Arabidopsis genetics, Arabidopsis immunology, Arabidopsis metabolism, Autoimmunity, Genome, Plant, Genotype, Mutation, Phenotype, Autophagosomes metabolism, Cell Death genetics, DNA-Binding Proteins genetics, DNA-Binding Proteins metabolism, Genes, Plant
- Abstract
Cell death, autophagy and endosomal sorting contribute to many physiological, developmental and immunological processes in plants. They are mechanistically interconnected and interdependent, but the molecular basis of their mutual regulation has only begun to emerge in plants. Here, we describe the identification and molecular characterization of CELL DEATH RELATED ENDOSOMAL FYVE/SYLF PROTEIN 1 (CFS1). The CFS1 protein interacts with the ENDOSOMAL SORTING COMPLEX REQUIRED FOR TRANSPORT I (ESCRT-I) component ELCH (ELC) and is localized at ESCRT-I-positive late endosomes likely through its PI3P and actin binding SH3YL1 Ysc84/Lsb4p Lsb3p plant FYVE (SYLF) domain. Mutant alleles of cfs1 exhibit auto-immune phenotypes including spontaneous lesions that show characteristics of hypersensitive response (HR). Autoimmunity in cfs1 is dependent on ENHANCED DISEASE SUSCEPTIBILITY 1 (EDS1)-mediated effector-triggered immunity (ETI) but independent from salicylic acid. Additionally, cfs1 mutants accumulate the autophagy markers ATG8 and NBR1 independently from EDS1. We hypothesize that CFS1 acts at the intersection of autophagosomes and endosomes and contributes to cellular homeostasis by mediating autophagosome turnover.
- Published
- 2017
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13. Amino acid substitution equivalent to human chorea-acanthocytosis I2771R in yeast Vps13 protein affects its binding to phosphatidylinositol 3-phosphate.
- Author
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Rzepnikowska W, Flis K, Kaminska J, Grynberg M, Urbanek A, Ayscough KR, and Zoladek T
- Subjects
- Actin Cytoskeleton genetics, Biological Transport genetics, Endosomes genetics, Humans, Mutation, Neuroacanthocytosis pathology, Phosphatidylinositol Phosphates metabolism, Saccharomyces cerevisiae genetics, Amino Acid Substitution genetics, Neuroacanthocytosis genetics, Saccharomyces cerevisiae Proteins genetics, Vesicular Transport Proteins genetics
- Abstract
The rare human disorder chorea-acanthocytosis (ChAc) is caused by mutations in hVPS13A gene. The hVps13A protein interacts with actin and regulates the level of phosphatidylinositol 4-phosphate (PI4P) in the membranes of neuronal cells. Yeast Vps13 is involved in vacuolar protein transport and, like hVps13A, participates in PI4P metabolism. Vps13 proteins are conserved in eukaryotes, but their molecular function remains unknown. One of the mutations found in ChAc patients causes amino acids substitution I2771R which affects the localization of hVps13A in skeletal muscles. To dissect the mechanism of pathogenesis of I2771R, we created and analyzed a yeast strain carrying the equivalent mutation. Here we show that in yeast, substitution I2749R causes dysfunction of Vps13 protein in endocytosis and vacuolar transport, although the level of the protein is not affected, suggesting loss of function. We also show that Vps13, like hVps13A, influences actin cytoskeleton organization and binds actin in immunoprecipitation experiments. Vps13-I2749R binds actin, but does not function in the actin cytoskeleton organization. Moreover, we show that Vps13 binds phospholipids, especially phosphatidylinositol 3-phosphate (PI3P), via its SHR_BD and APT1 domains. Substitution I2749R attenuates this ability. Finally, the localization of Vps13-GFP is altered when cellular levels of PI3P are decreased indicating its trafficking within the endosomal membrane system. These results suggest that PI3P regulates the functioning of Vps13, both in protein trafficking and actin cytoskeleton organization. Attenuation of PI3P-binding ability in the mutant hVps13A protein may be one of the reasons for its mislocalization and disrupted function in cells of patients suffering from ChAc., (© The Author 2017. Published by Oxford University Press.)
- Published
- 2017
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14. WASP family proteins, more than Arp2/3 activators.
- Author
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Tyler JJ, Allwood EG, and Ayscough KR
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- Actin Cytoskeleton metabolism, Actin-Related Protein 2-3 Complex genetics, Animals, Humans, Models, Biological, Peptides genetics, Peptides metabolism, Protein Binding, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics, Wiskott-Aldrich Syndrome Protein genetics, Actin-Related Protein 2-3 Complex metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Wiskott-Aldrich Syndrome Protein metabolism
- Abstract
Wiskott-Aldrich syndrome protein (WASP) family proteins have been extensively characterized as factors that promote the nucleation of actin through the activation of the protein complex Arp2/3. While yeast mostly have a single member of the family, mammalian cells have at least six different members, often with multiple isoforms. Members of the family are characterized by a common structure. Their N-termini are varied and are considered to confer spatial and temporal regulation of Arp2/3-activating activity, whereas their C-terminal half contains a polyproline-rich region, one or more WASP homology-2 (WH2) actin-binding domains and motifs that bind directly to Arp2/3. Recent studies, however, indicate that the yeast WASP homologue Las17 is able to nucleate actin independently of Arp2/3 through the function of novel G-actin-binding activities in its polyproline region. This allows Las17 to generate the mother filaments that are needed for subsequent Arp2/3 recruitment and activation during the actin polymerization that drives endocytic invagination in yeast. In this review, we consider how motifs within the polyproline region of Las17 support nucleation of actin filaments, and whether similar mechanisms might exist among other family members., (© 2016 The Author(s).)
- Published
- 2016
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15. Elucidating Key Motifs Required for Arp2/3-Dependent and Independent Actin Nucleation by Las17/WASP.
- Author
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Allwood EG, Tyler JJ, Urbanek AN, Smaczynska-de Rooij II, and Ayscough KR
- Subjects
- Endocytosis, Protein Binding, Saccharomyces cerevisiae metabolism, Actin-Related Protein 2-3 Complex metabolism, Actins metabolism, Saccharomyces cerevisiae Proteins metabolism, Wiskott-Aldrich Syndrome Protein metabolism
- Abstract
Actin nucleation is the key rate limiting step in the process of actin polymerization, and tight regulation of this process is critical to ensure actin filaments form only at specific times and at defined regions of the cell. Arp2/3 is a well-characterised protein complex that can promote nucleation of new filaments, though its activity requires additional nucleation promotion factors (NPFs). The best recognized of these factors are the WASP family of proteins that contain binding motifs for both monomeric actin and for Arp2/3. Previously we demonstrated that the yeast WASP homologue, Las17, in addition to activating Arp2/3 can also nucleate actin filaments de novo, independently of Arp2/3. This activity is dependent on its polyproline rich region. Through biochemical and in vivo analysis we have now identified key motifs within the polyproline region that are required for nucleation and elongation of actin filaments, and have addressed the role of the WH2 domain in the context of actin nucleation without Arp2/3. We have also demonstrated that full length Las17 is able to bind liposomes giving rise to the possibility of direct linkage of nascent actin filaments to specific membrane sites to which Las17 has been recruited. Overall, we propose that Las17 functions as the key initiator of de novo actin filament formation at endocytic sites by nucleating, elongating and tethering nascent filaments which then serve as a platform for Arp2/3 recruitment and function., Competing Interests: The authors have declared that no competing interests exist.
- Published
- 2016
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16. Insights into dynamin-associated disorders through analysis of equivalent mutations in the yeast dynamin Vps1.
- Author
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Moustaq L, Smaczynska-de Rooij II, Palmer SE, Marklew CJ, and Ayscough KR
- Abstract
The dynamins represent a superfamily of proteins that have been shown to function in a wide range of membrane fusion and fission events. An increasing number of mutations in the human classical dynamins, Dyn-1 and Dyn-2 has been reported, with diseases caused by these changes ranging from Charcot-Marie-Tooth disorder to epileptic encephalopathies. The budding yeast, Saccharomyces cerevisiae expresses a single dynamin-related protein that functions in membrane trafficking, and is considered to play a similar role to Dyn-1 and Dyn-2 during scission of endocytic vesicles at the plasma membrane. Large parts of the dynamin protein are highly conserved across species and this has enabled us in this study to select a number of disease causing mutations and to generate equivalent mutations in Vps1. We have then studied these mutants using both cellular and biochemical assays to ascertain functions of the protein that have been affected by the changes. Specifically, we demonstrate that the Vps1-G397R mutation (Dyn-2 G358R) disrupts protein oligomerization, Vps1-A447T (Dyn-1 A408T) affects the scission stage of endocytosis, while Vps1-R298L (Dyn-1 R256L) affects lipid binding specificity and possibly an early stage in endocytosis. Overall, we consider that the yeast model will potentially provide an avenue for rapid analysis of new dynamin mutations in order to understand the underlying mechanisms that they disrupt., Competing Interests: Conflict of interest: The authors declare no conflict of interest.
- Published
- 2016
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17. Phosphorylation Regulates the Endocytic Function of the Yeast Dynamin-Related Protein Vps1.
- Author
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Smaczynska-de Rooij II, Marklew CJ, Allwood EG, Palmer SE, Booth WI, Mishra R, Goldberg MW, and Ayscough KR
- Subjects
- Amino Acid Sequence, Endocytosis, GTP-Binding Proteins chemistry, GTP-Binding Proteins genetics, Molecular Sequence Data, Phosphorylation, Point Mutation, Saccharomyces cerevisiae chemistry, Saccharomyces cerevisiae genetics, Vesicular Transport Proteins chemistry, Vesicular Transport Proteins genetics, GTP-Binding Proteins metabolism, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae metabolism, Vesicular Transport Proteins metabolism
- Abstract
The family of dynamin proteins is known to function in many eukaryotic membrane fusion and fission events. The yeast dynamin-related protein Vps1 functions at several stages of membrane trafficking, including Golgi apparatus to endosome and vacuole, peroxisomal fission, and endocytic scission. We have previously shown that in its endocytic role, Vps1 functions with the amphiphysin heterodimer Rvs161/Rvs167 to facilitate scission and release of vesicles. Phosphoproteome studies of Saccharomyces cerevisiae have identified a phosphorylation site in Vps1 at serine 599. In this study, we confirmed this phosphorylation event, and we reveal that, like Rvs167, Vps1 can be phosphorylated by the yeast cyclin-associated kinase Pho85 in vivo and in vitro. The importance of this posttranslational modification was revealed when mutagenesis of S599 to a phosphomimetic or nonphosphorylatable form caused defects in endocytosis but not in other functions associated with Vps1. Mutation to nonphosphorylatable valine inhibited the Rvs167 interaction, while both S599V and S599D caused defects in vesicle scission, as shown by both live-cell imaging and electron microscopy of endocytic invaginations. Our data support a model in which phosphorylation and dephosphorylation of Vps1 promote distinct interactions and highlight the importance of such regulatory events in facilitating sequential progression of the endocytic process., (Copyright © 2016 Smaczynska-de Rooij et al.)
- Published
- 2015
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18. A Charge Swap mutation E461K in the yeast dynamin Vps1 reduces endocytic invagination.
- Author
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Palmer SE, Smaczynska-de Rooij II, Marklew CJ, Allwood EG, Mishra R, Goldberg MW, and Ayscough KR
- Abstract
Vps1 is the yeast dynamin-like protein that functions during several membrane trafficking events including traffic from Golgi to vacuole, endosomal recycling and endocytosis. Vps1 can also function in peroxisomal fission indicating that its ability to drive membrane fission is relatively promiscuous. It has been of interest therefore that several mutations have been identified in Vps1 that only disrupt its endocytic function. Most recently, disruption of the interaction with actin through mutation of residues in one of the central stalk α helices (RR457,458 EE) has been shown to disrupt endocytosis and cause an accumulation of highly elongated invaginations in cells. This data supports the idea that an interaction between Vps1 and actin is important to drive the scission stage in endocytosis. Another Vps1 mutant generated in the study was vps1 E461K. Here we show data demonstrating that the E461K mutation also disrupts endocytosis but at an early stage, resulting in inhibition of the invagination step itself.
- Published
- 2015
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19. Distinct Actin and Lipid Binding Sites in Ysc84 Are Required during Early Stages of Yeast Endocytosis.
- Author
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Urbanek AN, Allwood EG, Smith AP, Booth WI, and Ayscough KR
- Subjects
- Binding Sites, Gene Expression Regulation, Fungal, Green Fluorescent Proteins genetics, Green Fluorescent Proteins metabolism, Lipid Metabolism, Microfilament Proteins genetics, Mutation, Phosphatidylinositols metabolism, Saccharomyces cerevisiae Proteins genetics, Wiskott-Aldrich Syndrome Protein metabolism, Actins metabolism, Endocytosis physiology, Microfilament Proteins metabolism, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins metabolism
- Abstract
During endocytosis in S. cerevisiae, actin polymerization is proposed to provide the driving force for invagination against the effects of turgor pressure. In previous studies, Ysc84 was demonstrated to bind actin through a conserved N-terminal domain. However, full length Ysc84 could only bind actin when its C-terminal SH3 domain also bound to the yeast WASP homologue Las17. Live cell-imaging has revealed that Ysc84 localizes to endocytic sites after Las17/WASP but before other known actin binding proteins, suggesting it is likely to function at an early stage of membrane invagination. While there are homologues of Ysc84 in other organisms, including its human homologue SH3yl-1, little is known of its mode of interaction with actin or how this interaction affects actin filament dynamics. Here we identify key residues involved both in Ysc84 actin and lipid binding, and demonstrate that its actin binding activity is negatively regulated by PI(4,5)P2. Ysc84 mutants defective in their lipid or actin-binding interaction were characterized in vivo. The abilities of Ysc84 to bind Las17 through its C-terminal SH3 domain, or to actin and lipid through the N-terminal domain were all shown to be essential in order to rescue temperature sensitive growth in a strain requiring YSC84 expression. Live cell imaging in strains with fluorescently tagged endocytic reporter proteins revealed distinct phenotypes for the mutants indicating the importance of these interactions for regulating key stages of endocytosis.
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- 2015
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20. A dynamin-actin interaction is required for vesicle scission during endocytosis in yeast.
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Palmer SE, Smaczynska-de Rooij II, Marklew CJ, Allwood EG, Mishra R, Johnson S, Goldberg MW, and Ayscough KR
- Subjects
- Actins genetics, Dynamins genetics, Endocytosis genetics, Microfilament Proteins genetics, Nerve Tissue Proteins genetics, Protein Transport genetics, Saccharomyces cerevisiae Proteins genetics, Transport Vesicles ultrastructure, Yeasts, Actins metabolism, Dynamins metabolism, Endocytosis physiology, GTP-Binding Proteins genetics, Protein Transport physiology, Transport Vesicles metabolism, Vesicular Transport Proteins genetics
- Abstract
Actin is critical for endocytosis in yeast cells, and also in mammalian cells under tension. However, questions remain as to how force generated through actin polymerization is transmitted to the plasma membrane to drive invagination and scission. Here, we reveal that the yeast dynamin Vps1 binds and bundles filamentous actin. Mutational analysis of Vps1 in a helix of the stalk domain identifies a mutant RR457-458EE that binds actin more weakly. In vivo analysis of Vps1 function demonstrates that the mutation disrupts endocytosis but not other functions of Vps1 such as vacuolar trafficking or peroxisome fission. The mutant Vps1 is stably expressed in cells and co-localizes with the endocytic reporters Abp1 and the amphiphysin Rvs167. Detailed analysis of individual endocytic patch behavior indicates that the mutation causes aberrant movements in later stages of endocytosis, consistent with a scission defect. Ultrastructural analysis of yeast cells using electron microscopy reveals a significant increase in invagination depth, further supporting a role for the Vps1-actin interaction during scission. In vitro analysis of the mutant protein demonstrates that--like wild-type Vps1--it is able to form oligomeric rings, but, critically, it has lost its ability to bundle actin filaments into higher-order structures. A model is proposed in which actin filaments bind Vps1 during invagination, and this interaction is important to transduce the force of actin polymerization to the membrane to drive successful scission., (Copyright © 2015 The Authors. Published by Elsevier Ltd.. All rights reserved.)
- Published
- 2015
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21. Function and interactions of the Ysc84/SH3yl1 family of actin- and lipid-binding proteins.
- Author
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Urbanek AN, Chan R, and Ayscough KR
- Subjects
- Amino Acid Sequence, Animals, Binding Sites, Carrier Proteins chemistry, Conserved Sequence, Humans, Membrane Proteins, Microfilament Proteins chemistry, Molecular Sequence Data, Protein Binding, Protein Interaction Maps, Saccharomyces cerevisiae Proteins chemistry, Carrier Proteins physiology, Microfilament Proteins physiology, Saccharomyces cerevisiae Proteins physiology
- Abstract
Understanding how actin filaments are nucleated, polymerized and disassembled in close proximity to cell membranes is an area of growing interest. Protrusion of the plasma membrane is required for cell motility, whereas inward curvature or invagination is required for endocytic events. These morphological changes in membrane are often associated with rearrangements of actin, but how the many actin-binding proteins of eukaryotes function in a co-ordinated way to generate the required responses is still not well understood. Identification and analysis of proteins that function at the interface between the plasma membrane and actin-regulatory networks is central to increasing our knowledge of the mechanisms required to transduce the force of actin polymerization to changes in membrane morphology. The Ysc84/SH3yl1 proteins have not been extensively studied, but work in both yeast and mammalian cells indicate that these proteins function at the hub of networks integrating regulation of filamentous actin (F-actin) with changes in membrane morphology.
- Published
- 2015
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22. An Abp1-dependent route of endocytosis functions when the classical endocytic pathway in yeast is inhibited.
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Aghamohammadzadeh S, Smaczynska-de Rooij II, and Ayscough KR
- Subjects
- Actins metabolism, Biological Transport, Bridged Bicyclo Compounds, Heterocyclic pharmacology, Clathrin genetics, Clathrin metabolism, Fungal Proteins genetics, Gene Deletion, Gene Expression, Genes, Reporter, Mutation, Thiazolidines pharmacology, Yeasts drug effects, Endocytosis drug effects, Fungal Proteins metabolism, Yeasts physiology
- Abstract
Clathrin-mediated endocytosis (CME) is a well characterized pathway in both yeast and mammalian cells. An increasing number of alternative endocytic pathways have now been described in mammalian cells that can be both clathrin, actin, and Arf6- dependent or independent. In yeast, a single clathrin-mediated pathway has been characterized in detail. However, disruption of this pathway in many mutant strains indicates that other uptake pathways might exist, at least for bulk lipid and fluid internalization. Using a combination of genetics and live cell imaging, here we show evidence for a novel endocytic pathway in S. cerevisiae that does not involve several of the proteins previously shown to be associated with the 'classic' pathway of endocytosis. This alternative pathway functions in the presence of low levels of the actin-disrupting drug latrunculin-A which inhibits movement of the proteins Sla1, Sla2, and Sac6, and is independent of dynamin function. We reveal that in the absence of the 'classic' pathway, the actin binding protein Abp1 is now essential for bulk endocytosis. This novel pathway appears to be distinct from another described alternative endocytic route in S. cerevisiae as it involves at least some proteins known to be associated with cortical actin patches rather than being mediated at formin-dependent endocytic sites. These data indicate that cells have the capacity to use overlapping sets of components to facilitate endocytosis under a range of conditions.
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- 2014
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23. Yeast endocytic adaptor AP-2 binds the stress sensor Mid2 and functions in polarized cell responses.
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Chapa-y-Lazo B, Allwood EG, Smaczynska-de Rooij II, Snape ML, and Ayscough KR
- Subjects
- Candida albicans metabolism, Candida albicans physiology, Cell Wall metabolism, Cell Wall physiology, Clathrin metabolism, Membrane Proteins metabolism, Protein Binding physiology, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins physiology, Saccharomycetales metabolism, Saccharomycetales physiology, Adaptor Protein Complex 2 metabolism, Cell Polarity physiology, Endocytosis physiology, Intracellular Signaling Peptides and Proteins metabolism, Membrane Glycoproteins metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
The AP-2 complex is a heterotetrameric endocytic cargo-binding adaptor that facilitates uptake of membrane proteins during mammalian clathrin-mediated endocytosis. While budding yeast has clear homologues of all four AP-2 subunits which form a complex and localize to endocytic sites in vivo, the function of yeast AP-2 has remained enigmatic. Here, we demonstrate that AP-2 is required for hyphal growth in Candida albicans and polarized cell responses in Saccharomyces cerevisiae. Deletion of APM4, the cargo-binding mu subunit of AP-2, causes defects in pseudohyphal growth, generation of a mating projection and the cell wall damage response. In an apm4 null mutant, the cell wall stress sensor Mid2 is unable to relocalize to the tip of a mating projection following pheromone addition, or to the mother bud neck in response to cell wall damage. A direct binding interaction between Mid2 and the mu homology domain of Apm4 further supports a model in which AP-2 binds Mid2 to facilitate its internalization and relocalization in response to specific signals. Thus, Mid2 is the first cargo for AP-2 identified in yeast. We propose that endocytic recycling of Mid2 and other components is required for polarized cell responses ensuring cell wall deposition and is tightly monitored during cell growth., (© 2014 The Authors. Traffic published by John Wiley & Sons Ltd.)
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- 2014
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24. Apm4, the mu subunit of yeast AP-2 interacts with Pkc1, and mutation of the Pkc1 consensus phosphorylation site Thr176 inhibits AP-2 recruitment to endocytic sites.
- Author
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Chapa-Y-Lazo B and Ayscough KR
- Abstract
The AP-2 endocytic adaptor has been extensively characterized in mammalian cells and is considered to play a role both in cargo binding and in formation of endocytic sites. However, despite our detailed knowledge of mechanistic aspects of endocytic complex assembly and disassembly in the model organism Saccharomyces cerevisiae, no function of AP-2 had been described in wild-type yeast under normal growth conditions. A recent study however revealed that disruption of the complex caused by deletion of the gene encoding its mu subunit (APM4) caused defects in cell polarity such that responses to pheromone, nutritional status and cell wall damage were affected. Furthermore, a homozygous deletion of the mu subunit gene in Candida albicans affected its ability to grow hyphae. Direct binding to the yeast cell wall stress sensor Mid2 was detected, and in an apm4 deletion strain Mid2 showed reduced re-localization to the mother bud neck region following cell wall damage with calcofluor or to the mating projection tip. Here we demonstrate an interaction between Apm4 and the yeast cell wall integrity pathway component Pkc1 and show that mutation of the predicted Pkc1 site in the Apm4 hinge region affects recruitment of the AP-2 complex to endocytic sites.
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- 2014
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25. A novel actin-binding motif in Las17/WASP nucleates actin filaments independently of Arp2/3.
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Urbanek AN, Smith AP, Allwood EG, Booth WI, and Ayscough KR
- Subjects
- Endocytosis, Polymerization, Saccharomyces cerevisiae, Two-Hybrid System Techniques, Actin Cytoskeleton metabolism, Actin-Related Protein 2-3 Complex metabolism, Actins metabolism, Saccharomyces cerevisiae Proteins metabolism, Wiskott-Aldrich Syndrome Protein metabolism
- Abstract
Background: Actin nucleation is the key rate-limiting step in actin polymerization, and tight regulation of this process is critical to ensure that actin filaments form only at specific regions of the cell. Las17 is the primary activator of Arp2/3-driven actin nucleation in yeast and is required for membrane invagination during endocytosis. Its mammalian homolog, WASP, has also been studied extensively as an activator of Arp2/3-driven actin polymerization. In both Las17 and WASP, actin nucleation activity is attributed to an ability to bind actin through a WH2 domain and to bind Arp2/3 through an acidic region. The central region of both Las17 and WASP is rich in proline residues and is generally considered to bind to SH3-domain-containing proteins., Results: We have identified a novel actin-binding activity in the polyproline domain of both yeast Las17 and mammalian WASP. The polyproline domain of Las17 is also able to nucleate actin filaments independently of Arp2/3. Mutational analysis reveals that proline residues are required for this nucleation activity and that the binding site on actin maps to a region distinct from those used by other nucleation activities. In vivo analysis of yeast strains expressing las17 mutated in the WH2 domain, one of its proline motifs, or both shows additive defects in actin organization and endocytosis, with the proline mutant conferring more severe phenotypes than the WH2 mutant., Conclusions: Our data demonstrate a new actin-binding and nucleation mechanism in Las17/WASP that is required for its function in actin regulation during endocytosis., (Copyright © 2013 Elsevier Ltd. All rights reserved.)
- Published
- 2013
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26. Yeast dynamin Vps1 and amphiphysin Rvs167 function together during endocytosis.
- Author
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Smaczynska-de Rooij II, Allwood EG, Mishra R, Booth WI, Aghamohammadzadeh S, Goldberg MW, and Ayscough KR
- Subjects
- Amino Acid Substitution physiology, Cathepsin A metabolism, Cell Membrane metabolism, Cell Membrane ultrastructure, Cytoskeletal Proteins genetics, Cytoskeletal Proteins metabolism, GTP-Binding Proteins genetics, Gene Deletion, Membrane Glycoproteins metabolism, Microfilament Proteins genetics, Multiprotein Complexes metabolism, Protein Binding physiology, Protein Interaction Domains and Motifs physiology, Protein Transport physiology, R-SNARE Proteins metabolism, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Saccharomyces cerevisiae Proteins genetics, Sequence Deletion physiology, Two-Hybrid System Techniques, Vacuoles physiology, Vesicular Transport Proteins genetics, Wiskott-Aldrich Syndrome Protein metabolism, Endocytosis physiology, GTP-Binding Proteins metabolism, Microfilament Proteins metabolism, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins metabolism, Vesicular Transport Proteins metabolism
- Abstract
Dynamins are a conserved family of proteins involved in many membrane fusion and fission events. Previously, the dynamin-related protein Vps1 was shown to localize to endocytic sites, and yeast carrying deletions for genes encoding both the BAR domain protein Rvs167 and Vps1 had a more severe endocytic scission defect than either deletion alone. Vps1 and Rvs167 localize to endocytic sites at the onset of invagination and disassemble concomitant with inward vesicle movement. Rvs167-GFP localization is reduced in cells lacking vps1 suggesting that Vps1 influences Rvs167 association with the endocytic complex. Unlike classical dynamins, Vps1 does not have a proline-arginine domain that could interact with SH3 domain-containing proteins. Thus, while Rvs167 has an SH3 domain, it is not clear how an interaction would be mediated. Here, we demonstrate an interaction between Rvs167 SH3 domain and the single type I SH3-binding motif in Vps1. Mutant Vps1 that cannot bind Rvs167 rescues all membrane fusion/fission functions associated with Vps1 except for endocytic function, demonstrating the specificity and mechanistic importance of the interaction. In vitro, an Rvs161/Rvs167 heterodimer can disassemble Vps1 oligomers. Overall, the data support the idea that Vps1 and the amphiphysins function together to mediate scission during endocytosis in yeast., (© 2011 John Wiley & Sons A/S.)
- Published
- 2012
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27. Depletion of the actin bundling protein SM22/transgelin increases actin dynamics and enhances the tumourigenic phenotypes of cells.
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Thompson O, Moghraby JS, Ayscough KR, and Winder SJ
- Subjects
- Actins genetics, Cell Differentiation physiology, Cell Line, Tumor, Cell Movement physiology, Cell Transformation, Neoplastic genetics, Cells, Cultured, Collagen, Drug Combinations, Fibroblasts cytology, Fibroblasts metabolism, Humans, Laminin, Microfilament Proteins genetics, Muscle Proteins genetics, Neoplasm Invasiveness genetics, Phenotype, Proteoglycans, RNA, Small Interfering, Reactive Oxygen Species metabolism, Actins metabolism, Cell Transformation, Neoplastic metabolism, Microfilament Proteins metabolism, Muscle Proteins metabolism
- Abstract
Background: SM22 has long been studied as an actin-associated protein. Interestingly, levels of SM22 are often reduced in tumour cell lines, while they are increased during senescence possibly indicating a role for SM22 in cell fate decisions via its interaction with actin. In this study we aimed to determine whether reducing levels of SM22 could actively contribute to a tumourigenic phenotype., Results: We demonstrate that in REF52 fibroblasts, decreased levels of SM22 disrupt normal actin organization leading to changes in the motile behaviour of cells. Interestingly, SM22 depletion also led to an increase in the capacity of cells to spontaneously form podosomes with a concomitant increase in the ability to invade Matrigel. In PC3 prostate epithelial cancer cells by contrast, where SM22 is undetectable, re-expression of SM22 reduced the ability to invade Matrigel. Furthermore SM22 depleted cells also had reduced levels of reactive oxygen species when under serum starvation stress., Conclusions: These findings suggest that depletion of SM22 could contribute to tumourigenic properties of cells. Reduction in SM22 levels would tend to promote cell survival when cells are under stress, such as in a hypoxic tumour environment, and may also contribute to increases in actin dynamics that favour metastatic potential.
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- 2012
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28. Expression of Vps1 I649K a self-assembly defective yeast dynamin, leads to formation of extended endocytic invaginations.
- Author
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Mishra R, Smaczynska-de Rooij II, Goldberg MW, and Ayscough KR
- Abstract
The dynamin proteins have been associated with the process of endocytosis for many years. Until recently it was considered that yeast dynamin-related proteins did not play a role in endocytosis and the proposed scission function of dynamin was attributed to another group of proteins, the amphiphysins. However, it has now been shown that the yeast dynamin-like protein Vps1 shows a transient burst of localization to sites of endocytosis. Vps1 assembles at cortical sites at the time when actin polymerization is proposed to drive plasma membrane invagination. In concert with the amphiphysins Vps1 is then thought to function in the scission step to release a formed vesicle. It was shown that a mutation preventing self assembly of Vps1 caused a defect in endocytosis but not in other functions with which Vps1 is associated. Using electron microscopy we now show that this mutation I649K, corresponding to I690K in human Dyn1, causes formation of long endocytic invaginations. The data suggest that an ability of Vps1 to self assemble and to thereby stimulate its GTPase activity is critical for the 'pinching-off' stage of endocytosis to form a vesicle.
- Published
- 2011
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29. A role for the dynamin-like protein Vps1 during endocytosis in yeast.
- Author
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Smaczynska-de Rooij II, Allwood EG, Aghamohammadzadeh S, Hettema EH, Goldberg MW, and Ayscough KR
- Subjects
- Dynamins genetics, Endocytosis genetics, GTP-Binding Proteins genetics, Microscopy, Electron, Transmission, Microscopy, Fluorescence, Nerve Tissue Proteins genetics, Nerve Tissue Proteins metabolism, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae ultrastructure, Saccharomyces cerevisiae Proteins genetics, Vesicular Transport Proteins genetics, Dynamins metabolism, Endocytosis physiology, GTP-Binding Proteins metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Vesicular Transport Proteins metabolism
- Abstract
Dynamins are a conserved family of proteins involved in membrane fusion and fission. Although mammalian dynamins are known to be involved in several membrane-trafficking events, the role of dynamin-1 in endocytosis is the best-characterised role of this protein family. Despite many similarities between endocytosis in yeast and mammalian cells, a comparable role for dynamins in yeast has not previously been demonstrated. The reported lack of involvement of dynamins in yeast endocytosis has raised questions over the general applicability of the current yeast model of endocytosis, and has also precluded studies using well-developed methods in yeast, to further our understanding of the mechanism of dynamin function during endocytosis. Here, we investigate the yeast dynamin-like protein Vps1 and demonstrate a transient burst of localisation to sites of endocytosis. Using live-cell imaging of endocytic reporters in strains lacking vps1, and also electron microscopy and biochemical approaches, we demonstrate a role for Vps1 in facilitating endocytic invagination. Vps1 mutants were generated, and analysis in several assays reveals a role for the C-terminal self-assembly domain in endocytosis but not in other membrane fission events with which Vps1 has previously been associated.
- Published
- 2010
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30. Modulation of cell spreading and cell-substrate adhesion dynamics by dystroglycan.
- Author
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Thompson O, Moore CJ, Hussain SA, Kleino I, Peckham M, Hohenester E, Ayscough KR, Saksela K, and Winder SJ
- Subjects
- Animals, Cell Adhesion, Cell Line, Transformed, Cell Surface Extensions genetics, Cell Surface Extensions metabolism, Cloning, Molecular, Dystroglycans genetics, Mice, Microscopy, Fluorescence, Myoblasts pathology, Protein Binding genetics, Protein Transport genetics, RNA, Small Interfering genetics, Transfection, Vinculin metabolism, Dystroglycans metabolism, Focal Adhesions metabolism, Myoblasts metabolism
- Abstract
Dystroglycan is a ubiquitously expressed cell adhesion protein. Its principal role has been determined as a component of the dystrophin-glycoprotein complex of muscle, where it constitutes a key component of the costameric cell adhesion system. To investigate more fundamental aspects of dystroglycan function in cell adhesion, we examined the role of dystroglycan in the dynamics and assembly of cellular adhesions in myoblasts. We show that beta-dystroglycan is recruited to adhesion structures and, based on staining for vinculin, that overexpression or depletion of dystroglycan affects both size and number of fibrillar adhesions. Knockdown of dystroglycan increases the size and number of adhesions, whereas overexpression decreases the number of adhesions. Dystroglycan knockdown or overexpression affects the ability of cells to adhere to different substrates, and has effects on cell migration that are consistent with effects on the formation of fibrillar adhesions. Using an SH3 domain proteomic screen, we identified vinexin as a binding partner for dystroglycan. Furthermore, we show that dystroglycan can interact indirectly with vinculin by binding to the vinculin-binding protein vinexin, and that this interaction has a role in dystroglycan-mediated cell adhesion and spreading. For the first time, we also demonstrate unequivocally that beta-dystroglycan is a resident of focal adhesions.
- Published
- 2010
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31. Membrane rafts are involved in intracellular miconazole accumulation in yeast cells.
- Author
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François IE, Bink A, Vandercappellen J, Ayscough KR, Toulmay A, Schneiter R, van Gyseghem E, Van den Mooter G, Borgers M, Vandenbosch D, Coenye T, Cammue BP, and Thevissen K
- Subjects
- Antifungal Agents pharmacokinetics, Drug Resistance, Fungal, Endocytosis, Ergosterol metabolism, Gene Deletion, Gene Expression Regulation, Fungal, Genome, Fungal, Membrane Microdomains drug effects, Miconazole pharmacology, Phosphodiesterase Inhibitors pharmacology, Phospholipid Ethers pharmacology, Reactive Oxygen Species, Membrane Microdomains metabolism, Miconazole pharmacokinetics, Saccharomyces cerevisiae metabolism
- Abstract
Azoles inhibit ergosterol biosynthesis, resulting in ergosterol depletion and accumulation of toxic 14alpha-methylated sterols in membranes of susceptible yeast. We demonstrated previously that miconazole induces actin cytoskeleton stabilization in Saccharomyces cerevisiae prior to induction of reactive oxygen species, pointing to an ancillary mode of action. Using a genome-wide agar-based screening, we demonstrate in this study that S. cerevisiae mutants affected in sphingolipid and ergosterol biosynthesis, namely ipt1, sur1, skn1, and erg3 deletion mutants, are miconazole-resistant, suggesting an involvement of membrane rafts in its mode of action. This is supported by the antagonizing effect of membrane raft-disturbing compounds on miconazole antifungal activity as well as on miconazole-induced actin cytoskeleton stabilization and reactive oxygen species accumulation. These antagonizing effects point to a primary role for membrane rafts in miconazole antifungal activity. We further show that this primary role of membrane rafts in miconazole action consists of mediating intracellular accumulation of miconazole in yeast cells.
- Published
- 2009
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32. Differential requirements for actin during yeast and mammalian endocytosis.
- Author
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Aghamohammadzadeh S and Ayscough KR
- Subjects
- Actins genetics, Animals, Green Fluorescent Proteins genetics, Green Fluorescent Proteins metabolism, Humans, Microfilament Proteins genetics, Microfilament Proteins metabolism, Microscopy, Fluorescence, Models, Biological, Mutation, Osmotic Pressure, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics, Transformation, Genetic, Actins metabolism, Endocytosis, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Key features of clathrin-mediated endocytosis have been conserved across evolution. However, endocytosis in Saccharomyces cerevisiae is completely dependent on a functional actin cytoskeleton, whereas actin appears to be less critical in mammalian cell endocytosis. We reveal that the fundamental requirement for actin in the early stages of yeast endocytosis is to provide a strong framework to support the force generation needed to direct the invaginating plasma membrane into the cell against turgor pressure. By providing osmotic support, pressure differences across the plasma membrane were removed and this reduced the requirement for actin-bundling proteins in normal endocytosis. Conversely, increased turgor pressure in specific yeast mutants correlated with a decreased rate of endocytic patch invagination.
- Published
- 2009
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33. Functions of actin in endocytosis.
- Author
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Robertson AS, Smythe E, and Ayscough KR
- Subjects
- Adaptor Proteins, Signal Transducing, Animals, Cell Membrane metabolism, Cell Membrane ultrastructure, Clathrin metabolism, Humans, Lipid Metabolism, Microfilament Proteins genetics, Microfilament Proteins metabolism, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins metabolism, Transport Vesicles metabolism, Vesicular Transport Proteins metabolism, Actins metabolism, Endocytosis physiology
- Abstract
Endocytosis is a fundamental eukaryotic process required for remodelling plasma-membrane lipids and protein to ensure appropriate membrane composition. Increasing evidence from a number of cell types reveals that actin plays an active, and often essential, role at key endocytic stages. Much of our current mechanistic understanding of the endocytic process has come from studies in budding yeast and has been facilitated by yeast's genetic amenability and by technological advances in live cell imaging. While endocytosis in metazoans is likely to be subject to a greater array of regulatory signals, recent reports indicate that spatiotemporal aspects of vesicle formation requiring actin are likely to be conserved across eukaryotic evolution. In this review we focus on the 'modular' model of endocytosis in yeast before highlighting comparisons with other cell types. Our discussion is limited to endocytosis involving clathrin as other types of endocytosis have not been demonstrated in yeast.
- Published
- 2009
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34. Methyl beta-cyclodextrin reduces accumulation of reactive oxygen species and cell death in yeast.
- Author
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Du W and Ayscough KR
- Subjects
- Actins genetics, Actins metabolism, Animals, Apoptosis, Cell Membrane, Cytoprotection, Cytoskeletal Proteins metabolism, Endocytosis, Ergosterol metabolism, Fluorescence Recovery After Photobleaching, Hydrogen Peroxide metabolism, Oxidative Stress, Protein Stability, Protein Transport, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae Proteins metabolism, Sequence Deletion, Signal Transduction, ras Proteins metabolism, Cytoskeletal Proteins genetics, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins genetics, beta-Cyclodextrins metabolism
- Abstract
Stabilized F-actin structures have been shown to be detrimental to both mammalian and yeast cells. In yeast, stabilization of actin caused by addition of jasplakinolide, by point mutations in the act1 gene, or by deletion of certain genes that regulate F-actin leads to cell death with hallmarks of apoptosis. In particular, there is an elevation in the levels of reactive oxygen species, and we have shown the importance of the Ras/cAMP pathway for this effect. Here we show that in yeast cells deleted for end3, which functions to regulate actin organization during endocytosis, treatment of cells with methyl beta-cyclodextrin reduces levels of reactive oxygen species and inhibits cell death progression. Methyl beta-cyclodextrin is widely used to disrupt lipid rafts that contain cholesterol. The mechanism through which the rescue is achieved was investigated and we demonstrate that methyl beta-cyclodextrin reduces accumulation of Ras2 at the plasma membrane in Deltaend3 cells. We use FRAP and live cell imaging to determine the possible mechanism through which methyl beta-cyclodextrin functions to elicit this effect on Ras2 localization. Finally, we demonstrate that addition of methyl beta-cyclodextrin to wild-type cells can act to protect cells from acute oxidative stress caused by addition of hydrogen peroxide.
- Published
- 2009
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35. The WASP homologue Las17 activates the novel actin-regulatory activity of Ysc84 to promote endocytosis in yeast.
- Author
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Robertson AS, Allwood EG, Smith AP, Gardiner FC, Costa R, Winder SJ, and Ayscough KR
- Subjects
- Actins ultrastructure, Gene Deletion, Gene Expression Regulation, Fungal, Microfilament Proteins, Microscopy, Electron, Protein Binding, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins classification, Saccharomyces cerevisiae Proteins genetics, Wiskott-Aldrich Syndrome Protein classification, Wiskott-Aldrich Syndrome Protein genetics, Actins metabolism, Endocytosis, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Wiskott-Aldrich Syndrome Protein metabolism
- Abstract
Actin plays an essential role in many eukaryotic cellular processes, including motility, generation of polarity, and membrane trafficking. Actin function in these roles is regulated by association with proteins that affect its polymerization state, dynamics, and organization. Numerous proteins have been shown to localize with cortical patches of yeast actin during endocytosis, but the role of many of these proteins remains poorly understood. Here, we reveal that the yeast protein Ysc84 represents a new class of actin-binding proteins, conserved from yeast to humans. It contains a novel N-terminal actin-binding domain termed Ysc84 actin binding (YAB), which can bind and bundle actin filaments. Intriguingly, full-length Ysc84 alone does not bind to actin, but binding can be activated by a specific motif within the polyproline region of the yeast WASP homologue Las17. We also identify a new monomeric actin-binding site on Las17. Together, the polyproline region of Las17 and Ysc84 can promote actin polymerization. Using live cell imaging, kinetics of assembly and disassembly of proteins at the endocytic site were analyzed and reveal that loss of Ysc84 and its homologue Lsb3 decrease inward movement of vesicles consistent with a role in actin polymerization during endocytosis.
- Published
- 2009
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36. Whi2p links nutritional sensing to actin-dependent Ras-cAMP-PKA regulation and apoptosis in yeast.
- Author
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Leadsham JE, Miller K, Ayscough KR, Colombo S, Martegani E, Sudbery P, and Gourlay CW
- Subjects
- Animals, Cell Nucleus metabolism, Cell Nucleus pathology, Cyclic AMP-Dependent Protein Kinases genetics, Humans, Mitochondria metabolism, Mitochondria pathology, Reactive Oxygen Species metabolism, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics, ras Proteins genetics, Actins metabolism, Apoptosis physiology, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinases metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism, Signal Transduction physiology, ras Proteins metabolism
- Abstract
Elucidating the mechanisms by which eukaryotic cells coordinate environmental signals with intracellular ;fate' decisions, such as apoptosis, remains one of the important challenges facing cell biologists. It has recently emerged that the dynamic nature of the actin cytoskeleton is an important factor in the linkage of sensation of extracellular stimuli to signalling mechanisms that regulate programmed cell death. In yeast, actin has been shown to play a role in the regulation of apoptosis as cells prepare themselves for quiescence in the face of nutritional exhaustion, by facilitating the shutdown of Ras-cAMP-PKA pathway activity. Here, we demonstrate that the loss of Whi2p function, a protein known to influence cell cycle exit under conditions of nutritional stress, leads to cell death in yeast that displays the hallmarks of actin-mediated apoptosis. We show that actin-mediated apoptosis occurs as a result of inappropriate Ras-cAMP-PKA activity in Deltawhi2 cells. Cells lacking Whi2p function exhibit an aberrant accumulation of activated Ras2 at the mitochondria in response to nutritional depletion. This study provides evidence that the shutdown of cAMP-PKA signalling activity in wild-type cells involves Whi2p-dependent targeting of Ras2p to the vacuole for proteolysis. We also demonstrate for the first time that Whi2p-dependent regulation of cAMP-PKA signalling plays a physiological role in the differentiation of yeast colonies by facilitating elaboration of distinct zones of cell death.
- Published
- 2009
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37. Interactions between the yeast SM22 homologue Scp1 and actin demonstrate the importance of actin bundling in endocytosis.
- Author
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Gheorghe DM, Aghamohammadzadeh S, Smaczynska-de Rooij II, Allwood EG, Winder SJ, and Ayscough KR
- Subjects
- Actins genetics, Dimerization, Membrane Glycoproteins genetics, Microfilament Proteins genetics, Phosphorylation, Protein Binding physiology, Protein Structure, Tertiary physiology, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics, Actins metabolism, Endocytosis physiology, Membrane Glycoproteins metabolism, Microfilament Proteins metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
The yeast SM22 homologue Scp1 has previously been shown to act as an actin-bundling protein in vitro. In cells, Scp1 localizes to the cortical actin patches that form as part of the invagination process during endocytosis, and its function overlaps with that of the well characterized yeast fimbrin homologue Sac6p. In this work we have used live cell imaging to demonstrate the importance of key residues in the Scp1 actin interface. We have defined two actin binding domains within Scp1 that allow the protein to both bind and bundle actin without the need for dimerization. Green fluorescent protein-tagged mutants of Scp1 also indicate that actin localization does not require the putative phosphorylation site Ser-185 to be functional. Deletion of SCP1 has few discernable effects on cell growth and morphology. However, we reveal that scp1 deletion is compensated for by up-regulation of Sac6. Furthermore, Scp1 levels are increased in the absence of sac6. The presence of compensatory pathways to up-regulate Sac6 or Scp1 levels in the absence of the other suggest that maintenance of sufficient bundling activity is critical within the cell. Analysis of cortical patch assembly and movement during endocytosis reveals a previously undetected role for Scp1 in movement of patches away from the plasma membrane. Additionally, we observe a dramatic increase in patch lifetime in a strain lacking both sac6 and scp1, demonstrating the central role played by actin-bundling proteins in the endocytic process.
- Published
- 2008
- Full Text
- View/download PDF
38. Yeast Arf3p modulates plasma membrane PtdIns(4,5)P2 levels to facilitate endocytosis.
- Author
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Smaczynska-de Rooij II, Costa R, and Ayscough KR
- Subjects
- ADP-Ribosylation Factors genetics, Animals, Guanine Nucleotide Exchange Factors genetics, Guanine Nucleotide Exchange Factors metabolism, Humans, Phosphotransferases genetics, Phosphotransferases metabolism, Phosphotransferases (Alcohol Group Acceptor), Protein Structure, Tertiary, Recombinant Fusion Proteins genetics, Recombinant Fusion Proteins metabolism, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins genetics, Transcription Factors genetics, Transcription Factors metabolism, Two-Hybrid System Techniques, ADP-Ribosylation Factors metabolism, Cell Membrane chemistry, Cell Membrane metabolism, Endocytosis physiology, Phosphatidylinositol 4,5-Diphosphate metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Phosphatidylinositol-(4,5)-bisphosphate [PtdIns(4,5)P2] is a key regulator of endocytosis. PtdIns(4,5)P2 generation at the plasma membrane in yeast is mediated by the kinase Mss4p, but the mechanism underlying the temporal and spatial activation of Mss4p to increase formation of PtdIns(4,5)P2 at appropriate sites is not known. Here, we show that ADP ribosylation factor (Arf)3p, the yeast homologue of mammalian Arf6, is necessary for wild-type levels of PtdIns(4,5)P2 at the plasma membrane. Arf3p localizes to dynamic spots at the membrane, and the behaviour of these is consistent with it functioning in concert with endocytic machinery. Localization of Arf3p is disrupted by deletion of genes encoding an ArfGAP homology protein Gts1p and a guanine nucleotide exchange factor Yel1p. Significantly, deletion of arf3 causes a reduction in PtdIns(4,5)P2 at the plasma membrane, while increased levels of active Arf3p, caused by deletion of the GTPase-activating protein Gts1, increase PtdIns(4,5)P2 levels. Furthermore, elevated Arf3p correlates with an increase in the number of endocytic sites. Our data provide evidence for a mechanism in yeast to positively regulate plasma membrane production of PtdIns(4,5)P2 levels and that these changes impact on endocytosis.
- Published
- 2008
- Full Text
- View/download PDF
39. Miconazole induces changes in actin cytoskeleton prior to reactive oxygen species induction in yeast.
- Author
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Thevissen K, Ayscough KR, Aerts AM, Du W, De Brucker K, Meert EM, Ausma J, Borgers M, Cammue BP, and François IE
- Subjects
- Cytoskeleton drug effects, DNA, Fungal genetics, Mutagenesis, Phenylalanine pharmacology, Saccharomyces cerevisiae drug effects, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae ultrastructure, Sequence Deletion, Tryptophan pharmacology, Tyrosine pharmacology, Actins drug effects, Actins metabolism, Cytoskeleton ultrastructure, Miconazole pharmacology, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae metabolism
- Abstract
The antifungal compound miconazole inhibits ergosterol biosynthesis and induces reactive oxygen species (ROS) in susceptible yeast species. To further uncover the mechanism of miconazole antifungal action and tolerance mechanisms, we screened the complete set of haploid Saccharomyces cerevisiae gene deletion mutants for mutants with an altered miconazole sensitivity phenotype. We identified 29 S. cerevisiae genes, which when deleted conferred at least 4-fold hypersensitivity to miconazole. Major functional groups encode proteins involved in tryptophan biosynthesis, membrane trafficking including endocytosis, regulation of actin cytoskeleton, and gene expression. With respect to the antifungal activity of miconazole, we demonstrate an antagonism with tryptophan and a synergy with a yeast endocytosis inhibitor. Because actin dynamics and induction of ROS are linked in yeast, we further focused on miconazole-mediated changes in actin cytoskeleton organization. In this respect, we demonstrate that miconazole induces changes in the actin cytoskeleton, indicative of increased filament stability, prior to ROS induction. These data provide novel mechanistic insights in the mode of action of a ROS-inducing azole.
- Published
- 2007
- Full Text
- View/download PDF
40. Nucleocytoplasmic trafficking is required for functioning of the adaptor protein Sla1p in endocytosis.
- Author
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Gardiner FC, Costa R, and Ayscough KR
- Subjects
- Active Transport, Cell Nucleus physiology, Carrier Proteins metabolism, Cell Nucleus metabolism, Cytoplasm metabolism, Cytoskeletal Proteins, Saccharomyces cerevisiae physiology, Saccharomyces cerevisiae Proteins metabolism, Carrier Proteins physiology, Cell Nucleus physiology, Cytoplasm physiology, Endocytosis physiology, Saccharomyces cerevisiae Proteins physiology
- Abstract
Dual localization of proteins at the plasma membrane and within the nucleus has been reported in mammalian cells. Among these proteins are those involved in cell adhesion structures and in clathrin-mediated endocytosis. In the case of endocytic proteins, trafficking to the nucleus is not known to play a role in their endocytic function. Here, we show localization of the yeast endocytic adaptor protein Sla1p to the nucleus as well as to the cell cortex and we demonstrate the importance of specific regions of Sla1p for this nuclear localization. A role for specific karyopherins (importins and exportins) in Sla1p nuclear localization is revealed. Furthermore, endocytosis of Sla1p-dependent cargo is defective in three strains with karyopherin mutations. Finally, we investigate possible functions for nuclear trafficking of endocytic proteins. Our data reveal for the first time that nuclear transport of endocytic proteins is important for functional endocytosis in Saccharomyces cerevisiae. We determine the mechanism, involving an alpha/beta importin pair, that facilitates uptake of Sla1p and demonstrate that nuclear transport is required for the functioning of Sla1p during endocytosis.
- Published
- 2007
- Full Text
- View/download PDF
41. Apoptosis in yeast--mechanisms and benefits to a unicellular organism.
- Author
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Gourlay CW, Du W, and Ayscough KR
- Subjects
- Models, Biological, Saccharomyces cerevisiae Proteins metabolism, Saccharomyces cerevisiae Proteins physiology, Signal Transduction physiology, Yeasts cytology, Yeasts metabolism, ras Proteins metabolism, ras Proteins physiology, Apoptosis physiology, Yeasts physiology
- Abstract
Initial observations that the budding yeast Saccharomyces cerevisiae can be induced to undergo a form of cell death exhibiting typical markers of apoptosis has led to the emergence of a thriving new field of research. Since this discovery, a number of conserved pro- and antiapoptotic proteins have been identified in yeast. Indeed, early experiments have successfully validated yeasts as a powerful genetic tool with which to investigate mechanisms of apoptosis. However, we still have little understanding as to why programmes of cell suicide exist in unicellular organisms and how they may be benefit such organisms. Recent research has begun to elucidate pathways that regulate yeast apoptosis in response to environmental stimuli. These reports strengthen the idea that physiologically relevant mechanisms of programmed cell death are present, and that these function as important regulators of yeast cell populations.
- Published
- 2006
- Full Text
- View/download PDF
42. Actin regulation in endocytosis.
- Author
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Smythe E and Ayscough KR
- Subjects
- Animals, Clathrin-Coated Vesicles physiology, Cytoskeleton physiology, Humans, Saccharomycetales physiology, Actins metabolism, Endocytosis physiology
- Abstract
Increasing evidence from a variety of cell types has highlighted the importance of the actin cytoskeleton during endocytosis. No longer is actin viewed as a passive barrier that must be removed to allow endocytosis to proceed. Rather, actin structures are dynamically organised to assist the remodelling of the cell surface to allow inward movement of vesicles. The majority of our mechanistic insight into the role of actin in endocytosis has come from studies in budding yeast. Although endocytosis in mammalian cells is clearly more complex and subject to a greater array of regulatory signals, recent advances have revealed actin, and actin-regulatory proteins, to be present at endocytic sites. Furthermore, live cell imaging indicates that spatiotemporal aspects of actin recruitment and vesicle formation are likely to be conserved across eukaryotic evolution.
- Published
- 2006
- Full Text
- View/download PDF
43. Actin-induced hyperactivation of the Ras signaling pathway leads to apoptosis in Saccharomyces cerevisiae.
- Author
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Gourlay CW and Ayscough KR
- Subjects
- Adaptor Proteins, Signal Transducing, Cell Cycle Proteins metabolism, Cyclic AMP metabolism, Cyclic AMP-Dependent Protein Kinase Catalytic Subunits, Cyclic AMP-Dependent Protein Kinases metabolism, Cytoskeletal Proteins metabolism, Models, Biological, Mutation genetics, Protein Structure, Quaternary, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae Proteins chemistry, Thermodynamics, ras Proteins chemistry, Actins metabolism, Apoptosis, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae Proteins metabolism, Signal Transduction, ras Proteins metabolism
- Abstract
Recent research has revealed a conserved role for the actin cytoskeleton in the regulation of aging and apoptosis among eukaryotes. Here we show that the stabilization of the actin cytoskeleton caused by deletion of Sla1p or End3p leads to hyperactivation of the Ras signaling pathway. The consequent rise in cyclic AMP (cAMP) levels leads to the loss of mitochondrial membrane potential, accumulation of reactive oxygen species (ROS), and cell death. We have established a mechanistic link between Ras signaling and actin by demonstrating that ROS production in actin-stabilized cells is dependent on the G-actin binding region of the cyclase-associated protein Srv2p/CAP. Furthermore, the artificial elevation of cAMP directly mimics the apoptotic phenotypes displayed by actin-stabilized cells. The effect of cAMP elevation in inducing actin-mediated apoptosis functions primarily through the Tpk3p subunit of protein kinase A. This pathway represents the first defined link between environmental sensing, actin remodeling, and apoptosis in Saccharomyces cerevisiae.
- Published
- 2006
- Full Text
- View/download PDF
44. The actin cytoskeleton in ageing and apoptosis.
- Author
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Gourlay CW and Ayscough KR
- Subjects
- Actins physiology, Mitochondria metabolism, Models, Biological, Signal Transduction, Apoptosis, Cellular Senescence, Cytoskeleton physiology, Yeasts physiology
- Abstract
Regulated cell death, or apoptosis, has evolved to fulfil a myriad of functions amongst multicellular organisms. It is now apparent that programmed cell death occurs in unicellular organisms such as yeast. In yeast, as in higher eukaryotes, the actin cytoskeleton is an essential component of a number of cellular activities, and many of the regulatory proteins involved are highly conserved. Recent evidence from diverse eukaryotic systems suggests that the actin cytoskeleton has a role in regulating apoptosis via interactions with the mitochondria. This interaction also appears to have a significant impact on the management of oxidative stress and so cellular ageing. In this mini-review we summarise some of the work, which suggests that actin is a key regulator of apoptosis and ageing in eukaryotic cells.
- Published
- 2005
- Full Text
- View/download PDF
45. Interactions between Sla1p, Lsb5p and Arf3p in yeast endocytosis.
- Author
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Costa R and Ayscough KR
- Subjects
- Actins metabolism, Animals, Cell Membrane metabolism, Cytoskeletal Proteins, Cytoskeleton metabolism, Saccharomyces cerevisiae cytology, ADP-Ribosylation Factors metabolism, Carrier Proteins metabolism, Endocytosis physiology, Microfilament Proteins metabolism, Saccharomyces cerevisiae metabolism, Saccharomyces cerevisiae Proteins metabolism
- Abstract
Endocytosis is critical for controlling the protein-lipid composition of the plasma membrane, uptake of nutrients as well as pathogens, and also plays an important role in regulation of cell signalling. While a number of pathways for endocytosis have been characterized in different organisms, all of these require remodelling of the cell cortex. The importance of a dynamic actin cytoskeleton for facilitating endocytosis has been recognized for many years in budding yeast, and is increasingly supported by studies in mammalian cells. Our studies have focused on proteins that we have shown to act at the interface between the actin cytoskeleton and the endocytic machinery. In particular, we have studied interactions of Sla1p, which binds to both activators of actin dynamics, i.e. Abp1p, Las17p and Pan1p, and to cargo proteins such as the pheromone receptor Ste2p. More recently we have mapped the interaction of Sla1p with Lsb5p, a protein that has a similar structure to the GGA [Golgi-localizing, gamma-adaptin ear homology domain, Arf (ADP-ribosylation factor)-binding] family of proteins with an N-terminal VHS (Vps27p/Hrs/STAM)-domain and a GAT (GGAs and TOM1) domain. We show that Lsb5p can interact with yeast Arf3p (orthologous with mammalian Arf6) and we demonstrate a requirement for Arf3p expression in order to localize Lsb5p to the cell cortex.
- Published
- 2005
- Full Text
- View/download PDF
46. A role for actin in aging and apoptosis.
- Author
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Gourlay CW and Ayscough KR
- Subjects
- Cytoskeleton metabolism, Mitochondria metabolism, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae cytology, Saccharomyces cerevisiae Proteins metabolism, Signal Transduction physiology, Actins metabolism, Aging physiology, Apoptosis physiology, Saccharomyces cerevisiae physiology
- Abstract
The actin cytoskeleton is central to many cell processes including membrane trafficking and generation of cell polarity. We have identified a role for actin in cell death and in promoting longevity of the budding yeast, Saccharomyces cerevisiae. Aging in yeast appears to occur via an apoptotic-like pathway with changes including DNA fragmentation, loss of mitochondrial membrane permeability, increase in levels of ROS (reactive oxygen species) and exposure of phosphatidylserine in the outer leaflet of the plasma membrane. This pathway can be induced by alterations in actin dynamics, such that reduced dynamics correlates with increased levels of ROS and decreased viability. Conversely, increased actin dynamics correlates with low ROS levels and increased survival. Our current studies have focused on identifying pathways which couple changes in actin dynamics to cell death.
- Published
- 2005
- Full Text
- View/download PDF
47. Defining protein modules for endocytosis.
- Author
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Ayscough KR
- Subjects
- Biomarkers metabolism, Cell Membrane metabolism, Clathrin genetics, Models, Biological, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae growth & development, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism, Actins metabolism, Clathrin metabolism, Endocytosis physiology
- Abstract
Endocytosis is a complex process that controls the composition of the plasma membrane, nutrient uptake, and the regulation of cell signaling in eukaryotic cells. In this issue of Cell, Kaksonen et al. (2005) use real-time microscopy of yeast to reveal major insights, at the molecular level, into the spatial and temporal aspects of this critical process.
- Published
- 2005
- Full Text
- View/download PDF
48. Coupling actin dynamics to the endocytic process in Saccharomyces cerevisiae.
- Author
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Ayscough KR
- Subjects
- Actins drug effects, Actins metabolism, Bridged Bicyclo Compounds, Heterocyclic pharmacology, Carrier Proteins genetics, Carrier Proteins physiology, Cytoskeletal Proteins, Microscopy, Fluorescence, Models, Molecular, Mutation, Phosphorylation, Protein Kinase C genetics, Protein Kinase C physiology, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins physiology, Thiazoles pharmacology, Thiazolidines, Actins physiology, Endocytosis physiology, Saccharomyces cerevisiae physiology
- Abstract
Endocytosis is an essential eukaryotic process that, in many systems, has been reported to require a functional actin cytoskeleton. The process of endocytosis is critical for controlling the protein-lipid composition of the plasma membrane and uptake of nutrients as well as pathogens and also plays an important role in regulation of cell signalling. While several distinct pathways for endocytosis have been characterised, all of these require remodelling of the cell cortex. The importance of a dynamic actin cytoskeleton for facilitating endocytosis has been recognised for many years in budding yeast and is increasingly supported by studies in mammalian cells. Current evidence suggests that cortical patches are sites of endocytosis in Saccharomyces cerevisiae and that these sites are composed of sequentially forming protein complexes. Distinct stages in complex formation are characterised by the presence of different activators of F-actin polymerisation. Disassembly of the complexes is also essential for the endocytosis to proceed. Mutants lacking the kinases Ark1 and Prk1 accumulate actin and endocytic machinery in a single large clump in cells. Phosphorylation of endocytic proteins including Sla1p is proposed to cause their removal from the complex and allow later stages of the invagination process to occur. Dephosphorylation of endocytic components may then allow subsequent reincorporation into new sites of endocytic complex assembly.
- Published
- 2005
- Full Text
- View/download PDF
49. The actin cytoskeleton: a key regulator of apoptosis and ageing?
- Author
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Gourlay CW and Ayscough KR
- Subjects
- Animals, Cell Death, Humans, Oxygen Consumption, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae growth & development, Actins physiology, Aging physiology, Apoptosis physiology, Cytoskeleton physiology, Signal Transduction physiology
- Abstract
Evidence from many organisms has shown that the accumulation of reactive oxygen species (ROS) has a detrimental effect on cell well-being. High levels of ROS have been linked to programmed cell death pathways and to ageing. Recent reports have implicated changes to the dynamics of the actin cytoskeleton in the release of ROS from mitochondria and subsequent cell death.
- Published
- 2005
- Full Text
- View/download PDF
50. Identification of an upstream regulatory pathway controlling actin-mediated apoptosis in yeast.
- Author
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Gourlay CW and Ayscough KR
- Subjects
- Actins metabolism, Carrier Proteins genetics, Carrier Proteins metabolism, Cyclic AMP metabolism, Cyclic Nucleotide Phosphodiesterases, Type 2, Cytoskeletal Proteins genetics, Cytoskeletal Proteins metabolism, Cytoskeleton metabolism, Endosomal Sorting Complexes Required for Transport, Mitochondria metabolism, Mutation, Oxidative Stress, Phosphoric Diester Hydrolases genetics, Phosphoric Diester Hydrolases metabolism, Reactive Oxygen Species metabolism, Saccharomyces cerevisiae genetics, Saccharomyces cerevisiae Proteins genetics, Saccharomyces cerevisiae Proteins metabolism, Signal Transduction, Ubiquitin-Protein Ligase Complexes genetics, Ubiquitin-Protein Ligase Complexes metabolism, Apoptosis, Saccharomyces cerevisiae metabolism
- Abstract
The build up of reactive oxygen species (ROS) is known to contribute to a reduction in the lifespan of a cell and to their degeneration in diseases such as Alzheimer's and tissue ischaemia. It is therefore important to elucidate pathways that regulate cellular oxidative stress. We have previously shown that actin dynamics can affect the oxidative-stress burden on a yeast cell and thereby its potential lifespan. To elucidate further the connection between actin dynamics and oxidative stress, we sought to identify regulators of this process. The actin regulatory proteins Sla1p and End3p are important in maintaining a rapid turnover of F-actin in cortical patches. We show that cells expressing a mutated form of Sla1p or lacking End3p display markers of apoptosis such as depolarized mitochondrial membranes and elevated levels of reactive oxygen species. Overexpression of the ubiquitin ligase RSP5 can alleviate the oxidative-stress phenotype observed in cells lacking End3p by targeting Sla1p to the cortex and restoring actin remodelling capability. We also demonstrate that overexpression of PDE2, a negative regulator of the Ras/cAMP pathway rescues actin dynamics, reduces oxidative stress sensitivity and restores viability in deltaend3 cells. Our data suggest, for the first time, that a physiological link exists between actin regulation and cAMP signalling that regulates apoptosis in yeast.
- Published
- 2005
- Full Text
- View/download PDF
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