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Pseudomonas syringae pv. coronafaciens (Ps-c) is a pathogenic bacterium species that can be found in agricultural environments and causes diseases in plants. During a survey in 2019–2020 of different areas, bacterial halo blight (BHB) caused by Ps-c in oat (Avena sativa L.) was observed in many oat fields in Huan county, Gansu Province of China. Average leaf disease incidence was approximately 1 to 14%. The symptoms of BHB were mainly observed on leaves of oat and appeared as white to yellow streaks. After 20–30 d, the streaks became yellow necrotic lesions and spread over whole leaves, eventually causing leaves to wilt and senesce. Symptomatic leaves of affected oats were collected to investigate the etiology of BHB disease. A group of 32 bacterial isolates (HK7) phenotypically similar were isolated from the necrotic lesion margins. Pathogenicity tests of this group of isolates by wounding and injection demonstrated that the symptoms induced by them on oat were similar to those observed in the field. HK7 isolates were identified as Ps-c based on Biolog Gen III MicroStation, morphological, physiological and biochemical characterization, 16S rRNA and gyrB gene sequence analysis, which compared with a reference strain (Ps-c ATCC 19608). Furthermore, Ps-c was host specific. After inoculation of Ps-c on A. sativa (B7) and A. nuda (B2) in greenhouse by Completely Randomized Design (CRD), number of tillers, plant height, flag-leaf length, flag-leaf width, fresh weight, dry weight, panicle length, grains per spike, reproductive branche number and thousand grains weight of infected oat decreased by 19.44%, 11.49%, 11.34%, 9.23%, 11.61%, 7.57%, 6.11%, 9.73%, 9.31% and 4.15% compared with that of healthy oat, respectively. BHB (Ps-c) is a new bacterial disease on oat in China and has a negative effect on plant growth, forage and grain yield of oat, and these negative effects increased with the increase of disease severity. [ABSTRACT FROM AUTHOR]

Historically, traditional crossbreeding schemes have predominated in oat breeding. In vitro culture techniques seek to expedite the breeding process and enhance selection efficiency. Maximum yields are achieved from hybrid plants produced by crossing pure (homozygous) lines with the desired traits. Homozygous lines can be produced through conventional breeding methods, which are time-consuming and costly. Alternatively, the production of homozygous lines can be accelerated by producing doubled haploid (DH) plants derived from (haploid) male gametophytes or their microspores (androgenesis). This method condenses the various stages required for producing homozygous lines in a single generation, resulting in significant time and cost savings. These and other advantages render androgenic DHs the preferred choice in numerous important crops where any of the various in vitro experimental techniques (anthers culture or isolated microspores culture) are well-established. However, in the case of oat (Avena sativa L.), an efficient plant regeneration method remains not very effective compared to the most common cereals, possibly due to the known recalcitrance of this cereal to in vitro culture. This review presents the methods through anther and microspore cultures utilized in the production of oat DHs revealing the crucial factors influencing the efficiency of this method in oat (Avena sativa L.). [ABSTRACT FROM AUTHOR]

Background: The Domain of unknown function 679 membrane protein (DMP) family, which is unique to plants, plays a crucial role in reproductive development, stress response and aging. A comprehensive study was conducted to identify the DMP gene members of oat (Avena sativa) and to investigate their structural features and tissue-specific expression profiles. Utilizing whole genome and transcriptome data, we analyzed the physicochemical properties, gene structure, cis-acting elements, phylogenetic relationships, conserved structural (CS) domains, CS motifs and expression patterns of the AsDMP family in A. sativa. Results: The DMP family genes of A. sativa were distributed across 17 chromosomal scaffolds, encompassing a total of 33 members. Based on phylogenetic relationships, the AsDMP genes were classified into five distinct subfamilies. The gene structure also suggests that A. sativa may have undergone an intron loss event during its evolution. Covariance analysis indicates that genome-wide duplication and segmental duplication may be the major contributor to the expansion of the AsDMP gene family. Ka/Ks selective pressure analysis of the AsDMP gene family suggests that DMP gene pairs are generally conserved over evolutionary time. The upstream promoters of these genes contain several cis-acting elements, suggesting a potential role in abiotic stress responses and hormone induction. Transcriptome data revealed that the expression patterns of the DMP genes are involved in tissue and organ development. In this study, the AsDMP genes (AsDMP1, AsDMP19, and AsDMP22) were identified as potential regulators of seed senescence in A. sativa. These genes could serve as candidates for breeding studies focused on seed longevity and anti-aging germplasm in A. sativa. The study provides valuable insights into the regulatory mechanisms of the AsDMP gene family in the aging process of A. sativa germplasm and offers theoretical support for further function investigation into the functions of AsDMP genes and the molecular mechanisms underlying seed anti-aging. Conclusions: This study identified the AsDMP genes as being involved in the aging process of A. sativa seeds, marking the first report on the potential role of DMP genes in seed aging for A. sativa. [ABSTRACT FROM AUTHOR]

Mechanised non-contact, non-destructive imaging methodologies have revolutionised plant phenotyping, increasing throughput well beyond what was possible using traditional manual methods. Quantifying the variation in post-harvest material such as seeds and fruits, usually the economically important part of the crop, can be critical for commercial quality assessment as well as breeding and research. Therefore, reliable methods that gather metrics of interest, quickly and efficiently, are of widespread interest across sectors. This study focuses on evaluating the phenotyping capabilities of the Cgrain Value™, a novel grain imaging machine designed for quality and purity assessment and used primarily in commercial cereal production and processing. The performance of the Cgrain Value™ in its generation of high-throughput quantitative phenotypic data is compared with a well-established machine, MARVIN, assessing repeatability and reproducibility across a range of metrics. The findings highlight the potential of the Cgrain Value™, and some shortcomings, to provide detailed three-dimensional size, shape, and colour information rapidly, offering insights into oat grain morphology that could enhance genome-wide association studies and inform the breeding efforts in oat improvement programmes. [ABSTRACT FROM AUTHOR]

Oat (Avena sativa) is one of the most important cereal crops and cool-season forage grasses in the world. The calmodulin-binding transcription activator (CAMTA) gene family is one of the largest families in plants, and it plays vital roles in multiple biological processes. However, the CAMTA genes in oats, especially those involved in abiotic stress, have not yet been elucidated. Herein, our findings reveal the presence of 20 distinct AsCAMTA genes, which were clustered into three subfamilies based on their gene structure and conserved motifs, indicating functional similarities within each subgroup. Chromosomal mapping indicated an uneven distribution across 10 chromosomes, suggesting a complex evolutionary history marked by potential gene duplication events. The results showed that most AsCAMTA genes contained stress-related cis-elements. The study further investigated the expression patterns of these genes under abiotic stress conditions utilizing RT-qPCR analysis. The results identified three AsCAMTA genes (AsCAMTA5, AsCAMTA7, and AsCAMTA19) that exhibited significant up-regulation under salt stress, with AsCAMTA7 also showing a marked increase in expression under drought stress. These findings suggest a pivotal role of AsCAMTA5, AsCAMTA7, and AsCAMTA19 genes in mediating the responses to various abiotic stresses by integrating multiple stress signals in oats. This investigation provides valuable insights into the potential functions of AsCAMTA genes in the stress response mechanisms of oats, laying a foundation for further functional studies aimed at enhancing abiotic stress tolerance in crops. [ABSTRACT FROM AUTHOR]

The alternative oxidase (AOX), a common terminal oxidase in the electron transfer chain (ETC) of plants, plays a crucial role in stress resilience and plant growth and development. Oat (Avena sativa), an important crop with high nutritional value, has not been comprehensively studied regarding the AsAOX gene family. Therefore, this study explored the responses and potential functions of the AsAOX gene family to various abiotic stresses and their potential evolutionary pathways. Additionally, we conducted a genome-wide analysis to explore the evolutionary conservation and divergence of AOX gene families among three Avena species (Avena sativa, Avena insularis, Avena longiglumis) and four Poaceae species (Avena sativa, Oryza sativa, Triticum aestivum, and Brachypodium distachyon). We identified 12 AsAOX, 9 AiAOX, and 4 AlAOX gene family members. Phylogenetic, motif, domain, gene structure, and selective pressure analyses revealed that most AsAOXs, AiAOXs, and AlAOXs are evolutionarily conserved. We also identified 16 AsAOX segmental duplication pairs, suggesting that segmental duplication may have contributed to the expansion of the AsAOX gene family, potentially preserving these genes through subfunctionalization. Chromosome polyploidization, gene structural variations, and gene fragment recombination likely contributed to the evolution and expansion of the AsAOX gene family as well. Additionally, we hypothesize that AsAOX2 may have potential function in resisting wounding and heat stresses, while AsAOX4 could be specifically involved in mitigating wounding stress. AsAOX11 might contribute to resistance against chromium and waterlogging stresses. AsAOX8 may have potential fuction in mitigating ABA-mediated stress. AsAOX12 and AsAOX5 are most likely to have potential function in mitigating salt and drought stresses, respectively. This study elucidates the potential evolutionary pathways of the AsAOXs gene family, explores their responses and potential functions to various abiotic stresses, identifies potential candidate genes for future functional studies, and facilitates molecular breeding applications in A. sativa. [ABSTRACT FROM AUTHOR]

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Abstract Background The Domain of unknown function 679 membrane protein (DMP) family, which is unique to plants, plays a crucial role in reproductive development, stress response and aging. A comprehensive study was conducted to identify the DMP gene members of oat (Avena sativa) and to investigate their structural features and tissue-specific expression profiles. Utilizing whole genome and transcriptome data, we analyzed the physicochemical properties, gene structure, cis-acting elements, phylogenetic relationships, conserved structural (CS) domains, CS motifs and expression patterns of the AsDMP family in A. sativa. Results The DMP family genes of A. sativa were distributed across 17 chromosomal scaffolds, encompassing a total of 33 members. Based on phylogenetic relationships, the AsDMP genes were classified into five distinct subfamilies. The gene structure also suggests that A. sativa may have undergone an intron loss event during its evolution. Covariance analysis indicates that genome-wide duplication and segmental duplication may be the major contributor to the expansion of the AsDMP gene family. Ka/Ks selective pressure analysis of the AsDMP gene family suggests that DMP gene pairs are generally conserved over evolutionary time. The upstream promoters of these genes contain several cis-acting elements, suggesting a potential role in abiotic stress responses and hormone induction. Transcriptome data revealed that the expression patterns of the DMP genes are involved in tissue and organ development. In this study, the AsDMP genes (AsDMP1, AsDMP19, and AsDMP22) were identified as potential regulators of seed senescence in A. sativa. These genes could serve as candidates for breeding studies focused on seed longevity and anti-aging germplasm in A. sativa. The study provides valuable insights into the regulatory mechanisms of the AsDMP gene family in the aging process of A. sativa germplasm and offers theoretical support for further function investigation into the functions of AsDMP genes and the molecular mechanisms underlying seed anti-aging. Conclusions This study identified the AsDMP genes as being involved in the aging process of A. sativa seeds, marking the first report on the potential role of DMP genes in seed aging for A. sativa.

Aluminum (Al) may be beneficial to crops, but in excess becomes detrimental to the germination and initial development of seedlings. The main determining indicators are the type of crop and exposure duration. The aim of this study was to examine the influence of Al and of UV-C light on the germination and initial growth of white oats. Seeds were sown on germitest paper in a solution of 100, 200, 300, 400, or 500 mg/L of aluminum chloride and kept in a germination chamber at 20°C for a 12-hr photoperiod. Germination and seedling growth parameters were determined after 5 and 10 days. The seeds were also exposed to two doses of UV-C (0.85 and 3.42 kJ m−2) under aluminum chloride stress (200 mg/L). Data demonstrated that treatment with aluminum chloride significantly decrease in germination at 200 mg/L and total seedling length at 100 mg/L. Exposure of seeds to UV-C light under excess Al (200 mg/L) did not show a significant effect on germination and growth compared to control (non-irradiated). Results indicated that exposure to high concentration of Al in the medium adversely altered germination and initial growth of white oat seedlings. Although UV-C light alone was not detrimental to the germination process, treatment with UV-C light also failed to mitigate the toxic effects of Al. [ABSTRACT FROM AUTHOR]

Mechanised non-contact, non-destructive imaging methodologies have revolutionised plant phenotyping, increasing throughput well beyond what was possible using traditional manual methods. Quantifying the variation in post-harvest material such as seeds and fruits, usually the economically important part of the crop, can be critical for commercial quality assessment as well as breeding and research. Therefore, reliable methods that gather metrics of interest, quickly and efficiently, are of widespread interest across sectors. This study focuses on evaluating the phenotyping capabilities of the Cgrain Value™, a novel grain imaging machine designed for quality and purity assessment and used primarily in commercial cereal production and processing. The performance of the Cgrain Value™ in its generation of high-throughput quantitative phenotypic data is compared with a well-established machine, MARVIN, assessing repeatability and reproducibility across a range of metrics. The findings highlight the potential of the Cgrain Value™, and some shortcomings, to provide detailed three-dimensional size, shape, and colour information rapidly, offering insights into oat grain morphology that could enhance genome-wide association studies and inform the breeding efforts in oat improvement programmes.

This paper aimed to characterize and verify whether the linear relationships between agronomic traits of white oat are different between crops with and without chemical fertilization; and identify the agronomic ideotype that enhances the agronomic performance of white oats. Two uniformity tests were carried out with and without chemical fertilization in the 2020 harvest. In each trial, on 285 plants, agronomic traits were measured. Pearson's linear correlation coefficients and the direct and indirect effects of the trial analysis were calculated. The regression tree algorithm and Kohonen map neural network were used to identify the agronomic ideotype. The linear relationships between agronomic characters of white oat are similar between crops with and without chemical fertilization. White oat genotypes with greater panicle grain weight can be selected indirectly by panicle weight, regardless of cultivation with or without fertilization. White oat genotypes measuring 114.57 cm in height, 97.41 cm in panicle insertion, 18.11 cm in panicle length, 1.31 g in panicle weight and 27.92 grains in the panicle characterize the agronomic ideotype that maximizes panicle grain weight.

Abstract Background The myeloblastosis (MYB) transcription factor (TF) family is one of the largest and most important TF families in plants, playing an important role in a life cycle and abiotic stress. Results In this study, 268 Avena sativa MYB (AsMYB) TFs from Avena sativa were identified and named according to their order of location on the chromosomes, respectively. Phylogenetic analysis of the AsMYB and Arabidopsis MYB proteins were performed to determine their homology, the AsMYB1R proteins were classified into 5 subgroups, and the AsMYB2R proteins were classified into 34 subgroups. The conserved domains and gene structure were highly conserved among the subgroups. Eight differentially expressed AsMYB genes were screened in the transcriptome of transcriptional data and validated through RT-qPCR. Three genes in AsMYB2R subgroup, which are related to the shortened growth period, stomatal closure, and nutrient and water transport by PEG-induced drought stress, were investigated in more details. The AsMYB1R subgroup genes LHY and REV 1, together with GST, regulate ROS homeostasis to ensure ROS signal transduction and scavenge excess ROS to avoid oxidative damage. Conclusion The results of this study confirmed that the AsMYB TFs family is involved in the homeostatic regulation of ROS under drought stress. This lays the foundation for further investigating the involvement of the AsMYB TFs family in regulating A. sativa drought response mechanisms.

Introduction: Oats, a highly nutritious cereal known for their health benefits, contain various macromolecules of significant biological value, including abundant and highly digestible proteins. Despite their importance, oat proteins have not been extensively studied. Here, we present a complete set of the expressed globulins genes, which code for the main storage protein in oats as well as their chromosomal positions. Methods: Published expressed sequence tags for globulins were used as queries in the Sang oat genome. In addition, globulin proteins were fractionated from oat flour by solvent extraction based on differential solubility with other classes of cereal proteins. The protein fractions were separated by gel electrophoresis and analyzed by tandem mass spectrometry to confirm their identity and expression in seed. Results and discussion: In total 32 globulin gene sequences were identified on the oat genome. Out of these, the expression on RNA level could be confirmed and 27 were also detected as expressed proteins by MS. Our results provide the most extensive set of salt-soluble oat globulin sequences to date, paving the way for further understanding their implications for human nutrition. In addition, a simple methodology to fractionate oat proteins is presented. [ABSTRACT FROM AUTHOR]

Background: The myeloblastosis (MYB) transcription factor (TF) family is one of the largest and most important TF families in plants, playing an important role in a life cycle and abiotic stress. Results: In this study, 268 Avena sativa MYB (AsMYB) TFs from Avena sativa were identified and named according to their order of location on the chromosomes, respectively. Phylogenetic analysis of the AsMYB and Arabidopsis MYB proteins were performed to determine their homology, the AsMYB1R proteins were classified into 5 subgroups, and the AsMYB2R proteins were classified into 34 subgroups. The conserved domains and gene structure were highly conserved among the subgroups. Eight differentially expressed AsMYB genes were screened in the transcriptome of transcriptional data and validated through RT-qPCR. Three genes in AsMYB2R subgroup, which are related to the shortened growth period, stomatal closure, and nutrient and water transport by PEG-induced drought stress, were investigated in more details. The AsMYB1R subgroup genes LHY and REV 1, together with GST, regulate ROS homeostasis to ensure ROS signal transduction and scavenge excess ROS to avoid oxidative damage. Conclusion: The results of this study confirmed that the AsMYB TFs family is involved in the homeostatic regulation of ROS under drought stress. This lays the foundation for further investigating the involvement of the AsMYB TFs family in regulating A. sativa drought response mechanisms. [ABSTRACT FROM AUTHOR]

The dynamics of soil arthropod communities in annual monoculture grasslands is still unclear, which restricts the understanding of the degradation mechanism of cultivated grasslands. We cultivated two annual gramineae species, Lolium multiflorum and Avena sativa, separately in Hongyuan County, located on the eastern edge of the Qinghai-Tibet Plateau, in April 2019. We investigated soil arthropods, plant communities and soil properties in the cultivated grasslands and natural grassland in the late September every year from 2019 to 2022. The results showed that : 1) The taxonomic composition of soil arthropod communities differed significantly among three grasslands and sampling years. 2) There was no significant difference in the density, taxonomic richness, Shannon index and evenness index of soil arthropod communities among three grasslands. 3) The density of soil arthropod communities significantly fluctuated across years in three grasslands, and the taxonomic richness and Shannon index decreased significantly in the L. multiflorum and A. sativa grasslands, with the evenness index declining significantly only in the fourth year. The Shannon index fluctuated significantly and the evenness index varied little in natural grassland. 4) The above- and below-ground biomass, the contents of soil total P, total K and available N were the main factors influencing the taxonomic composition, density and diversity indices of soil arthropod communities. The results suggested that the cultivation of annual gramineae grasslands have significant effects on taxonomic composition, but not on density and diversity of soil arthropod communities, and those variables change significantly across different years. [ABSTRACT FROM AUTHOR]

This article reports the first occurrence of Pyrenophora avenicola causing leaf spot on oat plants in India. The disease was observed in Ludhiana, Punjab, and further surveillance revealed its presence in 52 out of 60 fields in the state. The symptoms included brownish-black lesions on the leaves, which gradually enlarged and formed blight. The fungus was isolated and identified through morphological and molecular techniques, confirming P. avenicola as the causal organism. Pathogenicity was also confirmed through inoculation experiments. This finding is significant as oat is an economically important crop, and neglecting this disease may lead to damage. [Extracted from the article]

Oats are grains that can be consumed by both animals and humans. They have thrived in Ethiopia, where certain oat species are considered native to the region. This work represents the first investigation of the population structure and genetic diversity of Ethiopian and other country oats. This led the scientists to explore the genetic diversity and population structure of wild and cultivated Ethiopian oats (Avena) species as well as oat cultivated in USA, the Netherlands and Austria. This study's main objective looks to be to investigate the variation in genetic makeup of cultivated and wild oat species. Studying the population structure of the oat species in the germplasm of Ethiopia, USA, the Netherlands and Austria. We used nineteen fluorescent SSR (simple sequence repeat) markers since previous research had indicated that these markers had high PIC (polymorphism information content) values. Five species of Avena were studied among the 176 oat accessions: A. sativa (cultivated oats) and four wild oats, such as A. abyssinica, A. vaviloviana, A. fatua, and A. sterilis. The AMOVA investigation revealed significant genetic distinctions among populations, individuals, and within individuals, explaining 18 % of the variance within populations, 4 % among populations, and 78 % within individuals. The AMOVA analysis of Avena species demonstrated extensive variance, with 33 % variation among species and 67 % within each species, underscoring robust species differentiation. The study also discovered gene interchange between wild oat and cultivated populations, defining two Avena species: domesticated oats and wild oats. Using the STRUCTURE software at K = 2, PCoA, and UPGMA, a distinct genetic structure was displayed in the dataset. Despite variations in ploidy levels and genomes, A. sterilis and A. vaviloviana were determined to be more closely linked, whereas A. abyssinica and A. fatua demonstrated a close association. This research delivers valuable insights for scientists and can be employed in oat breeding programs to improve future oat yield and productivity.

Water deficiency is one of the major abiotic stress conditions that decrease the yields of crops by affecting various metabolic processes in plants. The current state of food security has been alarmingly affected by these circumstances. Consequently, biological approaches to the issue can be implemented while taking into account their positive effects on the environment. The goal of the current work was to obtain rhizospheric bacterial strains possessing stress tolerance abilities, suitable to use as potent plant growth regulator under drought. For this purpose, bacterial strains were isolated from rhizospheric zone of different drought exposed plants and their putative plant growth-promoting attributes were analyzed by morphological and biochemical studies. Among the 30 isolates obtained, the best three drought tolerant and plant growth-promoting strains were selected and identified by 16S rRNA gene sequencing as Enterobacter cloacae-BHUSR1 (MG913373), Serratia marcescens-BHUSR2 (MG913374) and Klebsiella aerogenes-BHUSR3 (MG913375). These bacterial strains were good EPS, IAA, ammonia and siderophores producers as well as nutrient (K, Zn, P) solubilizers. The selected strains were used for biopriming Avena sativa seeds which were further exposed to water stress (5 days) in a completely randomized design to check the bacterial effect on plant growth. Water stress caused a significant alteration in growth, protein and chlorophyll content of Avena sativa. However, biopriming improved the physiological conditions of the oat plants by increasing the osmolytes (proline, phenol and sugar) under water deficient conditions. This technique was even helpful in augmenting the plants antioxidant levels, as high catalase activity was observed in oat after biopriming. It can be concluded from the study that bacterial seed biopriming can be a helpful tool in overcoming drought effects, as it regulates the plants physiological response towards stress with Klebsiella aerogenes-BHUSR3 being an efficient plant growth promoter in water deficient soils.

Background and objectives: Previous research has demonstrated the antidepressant potential of Avena sativa; however; its mode of action is still unknown. Hence, the role of the monoaminergic system in the antidepressant-like activity of A. sativa was investigated by using the tail suspension test in the present study. Methods: The mice intraperitoneally (i.p.) received the hydroalcoholic extract of A. sativa (50, 100, and 200 mg/kg) 30 min before the tail suspension test. The participation of the monoaminergic system in the antidepressant-like activity of A. sativa (200mg/kg) was assessed by administration of several receptor antagonists, 60 min before the administration of the extract in the test. Moreover, the effect of A. sativa on animals’ locomotion was examined by using open-field test. Results: All doses of the A. sativa extract caused a significant antidepressant-like effect (p0.05). In addition, pre-treatment of the animals with sulpiride, haloperidol, SCH23390, p-chlorophenylalanine, ketanserin, WAY100135, reserpine, yohimbine, and prazosin abolished the antidepressant-like activity of A. sativa. Furthermore, the joint administration of sub-effective doses of A. sativa with fluoxetine and imipramine produced a synergistic antidepressant-like effect. Conclusion: Avena sativa induced an antidepressant-like effect in tail suspension test that is dependent on the monoaminergic system; however; clinical studies are required for showing the beneficial effects of the extract in humans.

Artificial hybrids between cultivated Avena species and wild Avena macrostachya that possess genes for resistance to biotic and abiotic stresses can be important for oat breeding. For the first time, a comprehensive study of genomes of artificial fertile hybrids Avena sativa × Avena macrostachya and their parental species was carried out based on the chromosome FISH mapping of satellite DNA sequences (satDNAs) and also analysis of intragenomic polymorphism in the 18S–ITS1–5.8S rDNA region, using NGS data. Chromosome distribution patterns of marker satDNAs allowed us to identify all chromosomes in the studied karyotypes, determine their subgenomic affiliation, and detect several chromosome rearrangements. Based on the obtained cytogenomic data, we revealed differences between two A. macrostachya subgenomes and demonstrated that only one of them was inherited in the studied octoploid hybrids. Ribotype analyses showed that the second major ribotype of A. macrostachya was species-specific and was not represented in rDNA pools of the octoploids, which could be related to the allopolyploid origin of this species. Our results indicate that the use of marker satDNAs in cytogenomic studies can provide important data on genomic relationships within Avena allopolyploid species and hybrids, and also expand the potential for interspecific crosses for breeding. [ABSTRACT FROM AUTHOR]

In an ethyl methanesulfonate oat (Avena sativa) mutant population we have found a mutant with striking differences to the wild-type (WT) cv. Belinda. We phenotyped the mutant and compared it to the WT. The mutant was crossed to the WT and mapping-by-sequencing was performed on a pool of F2 individuals sharing the mutant phenotype, and variants were called. The impacts of the variants on genes present in the reference genome annotation were estimated. The mutant allele frequency distribution was combined with expression data to identify which among the affected genes was likely to cause the observed phenotype. A brassinosteroid sensitivity assay was performed to validate one of the identified candidates. A literature search was performed to identify homologs of genes known to be involved in seed shape from other species. The mutant had short kernels, compact spikelets, altered plant architecture, and was found to be insensitive to brassinosteroids when compared to the WT. The segregation of WT and mutant phenotypes in the F2 population was indicative of a recessive mutation of a single locus. The causal mutation was found to be one of 123 single-nucleotide polymorphisms (SNPs) spanning the entire chromosome 3A, with further filtering narrowing this down to six candidate genes. In-depth analysis of these candidate genes and the brassinosteroid sensitivity assay suggest that a Pro303Leu substitution in AVESA.00010b.r2.3AG0419820.1 could be the causal mutation of the short kernel mutant phenotype. We identified 298 oat proteins belonging to orthogroups of previously published seed shape genes, with AVESA.00010b.r2.3AG0419820.1 being the only of these affected by a SNP in the mutant. The AVESA.00010b.r2.3AG0419820.1 candidate is functionally annotated as a GSK3/SHAGGY-like kinase with homologs in Arabidopsis, wheat, barley, rice, and maize, with several of these proteins having known mutants giving rise to brassinosteroid insensitivity and shorter seeds. The substitution in AVESA.00010b.r2.3AG0419820.1 affects a residue with a known gain-of function substitution in Arabidopsis BRASSINOSTEROID-INSENSITIVE2. We propose a gain-of-function mutation in AVESA.00010b.r2.3AG0419820.1 as the most likely cause of the observed phenotype, and name the gene AsGSK2.1. The findings presented here provide potential targets for oat breeders, and a step on the way towards understanding brassinosteroid signaling, seed shape and nutrition in oats. [ABSTRACT FROM AUTHOR]

Oats (Avena sativa L. cv. Joyang), cultivated during June 2023 in experimental fields of Naju County, South Korea, exhibited crown rust symptoms resembling those caused by isolates of Puccinia coronata. Yellow urediniospores measuring 15.3 ± 3.2 × 13.6 ± 3.0 μm were identified through microscopic examination. Multilocus sequence typing of housekeeping genes in the DNA of this fungal isolate showed identity with P. coronata var. avenae f.sp. avenae, a pathogen of oats in South Korea previously lacking in taxonomic classification. This finding raises concerns of escalated crown rust disease in South Korea due to enhanced temperatures and humidity from climate shifts. Addressing these emerging concerns may require proactive strategies to protect oat cultivation in South Korea. [ABSTRACT FROM AUTHOR]

Seed yield components and ear characteristics are critical parameters for seed yield improvement of cereal crops. In this study, 23 hulled oat (Avena sativa) cultivars were planted in four experimental sites during 2018–2020. We determined the ear parameters including the number of four spikelet types, the ear length, the seed weight per ear, and the size of the left and the right seed in the double‐seed spikelet. In addition, five oat cultivars with the highest percentage of the triple‐seed spikelet were selected to evaluate the germination performance of the left, the middle, and the right seed. The results showed that the double‐seed spikelet was present in 73% of the ear, occupying the highest proportion than other spikelet types. The negative correlation showed the trade‐off between total seed number per ear and average seed weight. According to the pathway analysis, the number of double‐seed spikelet had the significantly highest direct effect on the seed weight per ear with the path coefficient of 0.93. In the double‐seed spikelet, the length and the thickness both had significantly positive correlations to the seed weight of the left and the right seeds. The middle seed, which had the smallest seed size, had the lowest germination rate, germination index, vigour index, seedling weight, and length than the right and left seed among three seed positions in the triple‐seed spikelet. We conclude that the double‐seed spikelet number is a key ear characteristic when breeding high‐yielding cultivars. [ABSTRACT FROM AUTHOR]

Context. Path analysis (PA) is a widely used multivariate statistical technique. When performing PA, the effects of the parameters of the mathematical model relating to the experimental design are disregarded, working only with the average effects of the treatments. Aims. We aimed to analyse the implications of statistical assumptions, and of removing mathematical model parameters, on the PA results in oat. Methods. A field study was conducted in southern Brazil in five crop years. The experimental design employed was a two-factor 22 × 5 randomised complete block design, characterised by 22 cultivars and five fungicide applications, with three repetitions. Six explanatory variables were measured, panicle length, panicle dry mass, panicle spikelet number, panicle grain number, panicle grain dry mass, and harvest index, and the primary variable yield. Initially, normality and multicollinearity diagnoses were carried out and correlation coefficients were calculated. The PA was performed in three ways: traditional, with measures to address multicollinearity (ridge), and traditional with eliminating variables. Key results and conclusions. The occurrence of multicollinearity resulted in obtaining path coefficients without biological application. Removing the model's parameters modifies the path coefficients, with average changes of 10.5% and 13.3% in the direction, and 24.7% and 23.0% in the magnitude, of the direct and indirect effects, respectively. Implications. This new approach makes it possible to remove the influences of treatments and experimental design from observations and, consequently, from path coefficients and their interpretations. Therefore, the researcher will reduce possible bias in the coefficient estimates, highlighting the real relationship between the variables, and making the results and interpretations more reliable. [ABSTRACT FROM AUTHOR]

Crown rust caused by Puccinia coronata f. sp. avenae (Pc), is the most widespread and damaging disease in oat worldwide, causing significant losses in grain yield and quality. This research documents the evolution of the Pc population in Argentina and evaluates the potential of crown rust race-specific resistance genes for use in practical breeding in this region. For this, the virulence of 166 isolates of Pc collected in different locations of Argentina were characterized on a set of 9 oat differentials carrying Pc resistance genes. In total, 31 different races were found. Changes in the race population during the 2014–2021 period were observed with Pc populations in 2019 and 2021 being more complex and having a higher virulence frequency. This suggests that the use of a few genes (Pc38, Pc39, Pc50, and Pc51) as basis for resistance to crown rust in the Argentinian germplasm has resulted in the continuous selection of Pc phenotypes with virulence to these genes. In this sense, our results showed an increase in the frequency of virulence on Pc38 and Pc51 from 2014 to 2019–2021, reaching virulence frequencies greater than 80%. Likewise, Pc39 and Pc50 also exhibited frequencies higher than 80% in 2019, showing significantly higher values determined in previous work carried out with populations of Pc in Argentina. There were no races virulent on Pc48, Pc52 and Pc64 among the isolates collected. Furthermore, our data confirmed the effectiveness of these three genes in field trials. Data provided here may be helpful in making decisions on resistance breeding strategies, such as the deployment of major single genes or more complex gene pyramids. [ABSTRACT FROM AUTHOR]

Present study was carried out on two seed lots (Fresh and one year old) of two oat varieties i.e. OS 6 and HFO 611 in the Department of Seed Science and Technology, CCS HAU Hisar during 2022-23. The seed was hormo-primed with different concentrations of GA3 (200, 400, 600, 800 and 1000 ppm). The results revealed that hormo-priming resulted in enhancement in seed quality parameters in both the lots of both varieties as the concentration increased from 200 ppm to 600 ppm and thereafter it starts decreasing. Maximum enhancement in germination was observed in seeds hormoprimed with GA3 @ 600 ppm. The more enhancement in germination was observed in the hormoprimed seeds of old seed lot as compared to fresh seed lots in both the varieties. In variety OS 6, 1.4% enhancement in germination was recorded in hormo-primed seeds over control in fresh seed lot while enhancement was 16.96 % in hormo-primed seeds with GA 3@ 600 ppm over control in old seed lot. In variety HFO 611, enhancement in seed germination of hormo-primed seeds over control was 1.7 % in fresh seed lot and 16.26 % in old seed lot with same concentration. It is concluded from the study that hormo-priming with GA3 @ 600 ppm is very effective in enhancing the seed quality parameters of oat, hence this hormo-priming practice should be used to enhance the germination/ vigour of marginal/old seeds lots. [ABSTRACT FROM AUTHOR]

ABSTRACT: This study was conducted with the aim of analyzing the implications of removing the parameters from the mathematical model on the results of path analysis, with oats grown in different years and agricultural scenarios (with and without fungicide). For this, two field trials were conducted in southern Brazil, in five years of growth. The experimental design used in trial I (with fungicide application) was randomized complete blocks (RCB), in a 22 × 4 bifactorial arrangement, characterized by twenty-two oat cultivars and four fungicide applications. For trial II (without fungicide application) the RCB design was used, and the treatments were characterized by twenty-two oat cultivars, with three replications. The traits measured were panicle length, panicle mass, number of spikelets, number of grains, grain mass, and grain yield. For each year, data group, and scenario, the correlation coefficients between the explanatory variables and grain yield were calculated. The diagnosis of multicollinearity indicated violation of the statistical assumption, so it was necessary to proceed with a path analysis under multicollinearity (ridge). The removal of parameters from the mathematical model caused changes in the linear relationships between the oat yield traits, with the maintenance of the linear correlation coefficients in 3.30% and 20% of the situations, for the scenarios with and without fungicide application, respectively. Regarding the path coefficients, it was observed that the direct effects were maintained in 3.30% and 30% and indirect effects in 7.33% and 24.67% of the situations, for the scenarios with and without fungicide application, respectively.

IntroductionOats, a highly nutritious cereal known for their health benefits, contain various macromolecules of significant biological value, including abundant and highly digestible proteins. Despite their importance, oat proteins have not been extensively studied. Here, we present a complete set of the expressed globulins genes, which code for the main storage protein in oats as well as their chromosomal positions.MethodsPublished expressed sequence tags for globulins were used as queries in the Sang oat genome. In addition, globulin proteins were fractionated from oat flour by solvent extraction based on differential solubility with other classes of cereal proteins. The protein fractions were separated by gel electrophoresis and analyzed by tandem mass spectrometry to confirm their identity and expression in seed.Results and discussionIn total 32 globulin gene sequences were identified on the oat genome. Out of these, the expression on RNA level could be confirmed and 27 were also detected as expressed proteins by MS. Our results provide the most extensive set of salt-soluble oat globulin sequences to date, paving the way for further understanding their implications for human nutrition. In addition, a simple methodology to fractionate oat proteins is presented.

ObjectiveSmoking reduction or cessation are critical public health goals, given the well-documented risks of tobacco use to health. Reducing smoking frequency and cessation entirely are challenging due to nicotine addiction and withdrawal symptoms, which can significantly affect mental wellness and overall wellbeing. Previous research has suggested that certain dietary supplements may support smoking cessation and reduction efforts by mitigating these adverse effects. The objective of this study was to assess the effect of supplementation with 900 mg/day of Neuravena®, a green oat extract (GOE) of Avena sativa L., in enhancing wellness and wellbeing during a smoking reduction or cessation experience.MethodsThis was an 8-week randomized, double-blind, placebo-controlled study, ClinicalTrials Identifier: NCT04749017 (https://classic.clinicaltrials.gov/ct2/show/NCT04749017). Participants were assigned to one of the study groups, 72 participants were assigned to GOE and 73 to placebo. The subjects were followed for 8-weeks intervention period as well as an additional 4-week follow-up period. At subsequent visits, they underwent clinical assessments including assessments of quality of life, perceived stress, depression, nicotine dependence, anxiety, cognitive performance, and specific assessments of craving intensity.ResultsGOE was associated with greater improvements in elements of the abbreviated World Health Organization Quality of Life (WHOQOL-BREF) questionnaire as compared with placebo. Similar results were obtained from the SF-36 questionnaire and a visual QoL analogue scale (VAS). Perceived stress levels showed greater decline from baseline among the GOE supplemented participants as compared to placebo. Sleep quality parameters improved with GOE supplementation and worsened in the placebo group. At the end of the intervention period, the percentage of successful reducers (defined as >20% reduction in daily cigarettes) was higher in the GOE group as compared to placebo (66.7% vs. 49.3%, p = 0.034). The improvements from baseline in QoL measures in the GOE group persisted at 4 weeks after termination of the intervention.ConclusionGOE supplementation demonstrated greater improvements in quality of life measures, stress and sleep related parameters during a smoking reduction or cessation experience and the product was shown to be safe and well tolerated.

Historically, traditional crossbreeding schemes have predominated in oat breeding. In vitro culture techniques seek to expedite the breeding process and enhance selection efficiency. Maximum yields are achieved from hybrid plants produced by crossing pure (homozygous) lines with the desired traits. Homozygous lines can be produced through conventional breeding methods, which are time-consuming and costly. Alternatively, the production of homozygous lines can be accelerated by producing doubled haploid (DH) plants derived from (haploid) male gametophytes or their microspores (androgenesis). This method condenses the various stages required for producing homozygous lines in a single generation, resulting in significant time and cost savings. These and other advantages render androgenic DHs the preferred choice in numerous important crops where any of the various in vitro experimental techniques (anthers culture or isolated microspores culture) are well-established. However, in the case of oat (Avena sativa L.), an efficient plant regeneration method remains not very effective compared to the most common cereals, possibly due to the known recalcitrance of this cereal to in vitro culture. This review presents the methods through anther and microspore cultures utilized in the production of oat DHs revealing the crucial factors influencing the efficiency of this method in oat (Avena sativa L.).

Oat (Avena sativa) is one of the most important cereal crops and cool-season forage grasses in the world. The calmodulin-binding transcription activator (CAMTA) gene family is one of the largest families in plants, and it plays vital roles in multiple biological processes. However, the CAMTA genes in oats, especially those involved in abiotic stress, have not yet been elucidated. Herein, our findings reveal the presence of 20 distinct AsCAMTA genes, which were clustered into three subfamilies based on their gene structure and conserved motifs, indicating functional similarities within each subgroup. Chromosomal mapping indicated an uneven distribution across 10 chromosomes, suggesting a complex evolutionary history marked by potential gene duplication events. The results showed that most AsCAMTA genes contained stress-related cis-elements. The study further investigated the expression patterns of these genes under abiotic stress conditions utilizing RT-qPCR analysis. The results identified three AsCAMTA genes (AsCAMTA5, AsCAMTA7, and AsCAMTA19) that exhibited significant up-regulation under salt stress, with AsCAMTA7 also showing a marked increase in expression under drought stress. These findings suggest a pivotal role of AsCAMTA5, AsCAMTA7, and AsCAMTA19 genes in mediating the responses to various abiotic stresses by integrating multiple stress signals in oats. This investigation provides valuable insights into the potential functions of AsCAMTA genes in the stress response mechanisms of oats, laying a foundation for further functional studies aimed at enhancing abiotic stress tolerance in crops.

Introduction: Wheat stem sawfly (WSS), Cephus cinctus Norton, is a major pest of common bread wheat (Triticum aestivum L.) and other cultivated cereals in North America. Planting of cultivars with solid stems has been the primary management strategy to prevent yield loss due to WSS infestation, however expression of this phenotype can vary depending on environmental conditions and solid stems hinder biological control of WSS via braconid parasitoids Bracon cephi (Gahan) and Bracon lissogaster Muesebeck. In the hollow stems of oat (Avena sativa L.), WSS larvae experience 100% mortality before they reach late instars, but the mechanisms for this observed resistance have not been characterized. Objective: The objective of this study was to explore additional sources of resistance outside of the historic solid stem phenotype. Methods: Here, we use an untargeted metabolomics approach to examine the response of the metabolome of two cultivars of oat and four cultivars of spring wheat to infestation by WSS. Using liquid chromatography-mass spectrometry (LC-MS), differentially expressed metabolites were identified between oat and wheat which were associated with the phenylpropanoid pathway, phospholipid biosynthesis and signaling, the salicylic acid signaling pathway, indole-3-acetic acid (IAA) degradation, and biosynthesis of 1,4-benzoxazin-3-ones (Bxs). Several phospho-and galacto-lipids were found in higher abundance in oat, and with the exception of early stem solidness cultivar Conan, both species experienced a decrease in abundance once infested. In all wheat cultivars except Conan, an increase in abundance was observed for Bxs HMDBOA-glc and DIBOA-b-Dglucoside after infestation, indicating that this pathway is involved in wheat response to infestation in both solid and hollow stemmed cultivars. Differences between species in compounds involved in IAA biosynthesis, degradation and inactivation suggest that wheat may respond to infestation by inactivating IAA or altering the IAA pool in stem tissue. Conclusion: We propose that the species differences found here likely affect the survival of WSS larvae and may also be associated with differences in stem architecture at the molecular level. Our findings suggest pathways to focus on for future studies in elucidating plant response to WSS infestation. [ABSTRACT FROM AUTHOR]

The aim of this study was to compare the susceptibility of oats to Fusarium langsethiae infection, as measured by combined HT‐2 and T‐2 mycotoxin concentration (HT2 + T2) in harvested oat grain samples. Over 10 years (2004–2013), samples from single replicates of each UK Recommended List oat trial were analyzed for HT‐2 and T‐2. For spring oats, there were small but statistically significant differences between varieties, whereas for winter oats, they had a broader range and higher mean of HT2 + T2 concentration compared with spring oats. For winter oats, the short‐strawed varieties had consistently high HT2 + T2 levels compared with other varieties, whereas naked varieties were at the lower end of the range, and short, naked varieties had intermediate levels. A separate set of harvested oat grain samples of eight common varieties from 17 field experiments were analyzed by modified joint regression analysis. Results showed that environment had the strongest impact on HT‐2 and T‐2 concentrations but that the varietal susceptibility to HT‐2 and T‐2 contamination was highly stable across environments. This methodology can be used to calculate a Fusarium (HT2 + T2) resistance score for oats to aid grower selection of suitable varieties, as is available for Fusarium (DON) resistance for wheat varieties in many countries. [ABSTRACT FROM AUTHOR]

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Copyright of Environmental & Social Management Journal / Revista de Gestão Social e Ambiental is the property of Environmental & Social Management Journal and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

We investigated the quality indices of the biomass from Avena sativa and Hordeum vulgare species which were grown in the experimental plot of the “Alexandru Ciubotaru” National Botanical Garden (Institute), Chisinau, Republic of Moldova. The results revealed that the dry matter of whole plants of the studied species contained 9.5-11.9% CP, 6.5-7.5% ash, 34.9- 35.6% CF, 36.7-37.4% ADF, 62.7-62.8% NDF, 2.9-4.6 % ADL, 16.3-16.7% TSS, with forage value 598-603 g/kg DDM, RFV= 89, 11.84-11.92 MJ/kg DE, 9.72-9.79 MJ/kg ME and 5.37-5.81 MJ/kg NEl. The nutrient content and energy value of the prepared hays were: 9.0- 10.5% CP, 6.9-7.4% ash, 38.1- 43.5% CF, 40.4-45.6% ADF, 66.0-73.6% NDF, 4.5-5.0 % ADL, 5.1-111% TSS, 534-574 g/kg DDM, 10.69-11.40 MJ/kg DE, 8.76-9.36 MJ/kg ME, 4.79-5.39 MJ/kg NEl. The ensiled forage contained 10.2-12.9% CP, 7.8-11.4% ash, 33.8-39.3% CF, 34.7-41.3% ADF, 57.1.0-69.9% NDF, 1.8-4.0 % ADL, 2.6-12.9% TSS, 32.9-37.3% Cel, 22.4-28.6 % HC, 567-619 g/kg DDM, RFV= 76-100, 11.28-12.21MJ/kg DE, 9.26-10.06 MJ/kg ME and 5.29-6.10MJ/kg NEl. The biochemical methane potential of the studied substrates from Avena sativa reaches 329-355 l/kg VS, but Hordeum vulgare substrates – 361-379 l/kg VS. The collected straw from the studied species contained 6.2-4.5% CP, 5.9-8.2% ash, 5.6-6.8 % ADL, 44.3-48.2% Cel, 23.2-30.1 % HC with biochemical methane potential 282-308 l/kg VS and theoretical ethanol potential 541-574 L/t. [ABSTRACT FROM AUTHOR]

Copyright of Environmental & Social Management Journal / Revista de Gestão Social e Ambiental is the property of Environmental & Social Management Journal and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Copyright of Biogeosystem Technique is the property of Cherkas Global University Press and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Oat is a dual-purpose crop used for both food and feed for animals. The objective of this work is to characterize oat varieties for their genetic diversity in yield, physical traits, and nutritional composition, aiming to identify potential parent varieties for breeding programs to develop new oat varieties for improved livestock feed and diverse industrial applications. To conduct, chemical analysis for protein and carbohydare fractions, energy and digestible nutrient estimated, stastical analyses performed to assess genetic variations for traits among vaieties. Significant genetic variation (p

Potato cultivation is characterized by a high use of inputs, which results in soil degradation and contamination. Crop rotation is a good practice to counteract these problems. This study aimed to assess the sustainability of three rotation sequences (potato-pea-potato, potato-oat-pea and potato-potato-oat) using the sustainability assessment methodology oriented to agricultural experiments associated with soil management. It was observed that, both environmentally and economically, potato-potato-oat is the most sustainable treatment, while potato-oat-pea is the most socially sustainable. Balancing the three dimensions, potato-potato-oat is the most sustainable treatment, with sustainability index of 0.85, while potato-pea-potato is the least sustainable one, with 0.64. The potato-potato-oat rotation sequence generates a less negative environmental impact, as well as a higher social equity and economic return for the farmer.

In an ethyl methanesulfonate oat (Avena sativa) mutant population we have found a mutant with striking differences to the wild-type (WT) cv. Belinda. We phenotyped the mutant and compared it to the WT. The mutant was crossed to the WT and mapping-by-sequencing was performed on a pool of F2 individuals sharing the mutant phenotype, and variants were called. The impacts of the variants on genes present in the reference genome annotation were estimated. The mutant allele frequency distribution was combined with expression data to identify which among the affected genes was likely to cause the observed phenotype. A brassinosteroid sensitivity assay was performed to validate one of the identified candidates. A literature search was performed to identify homologs of genes known to be involved in seed shape from other species. The mutant had short kernels, compact spikelets, altered plant architecture, and was found to be insensitive to brassinosteroids when compared to the WT. The segregation of WT and mutant phenotypes in the F2 population was indicative of a recessive mutation of a single locus. The causal mutation was found to be one of 123 single-nucleotide polymorphisms (SNPs) spanning the entire chromosome 3A, with further filtering narrowing this down to six candidate genes. In-depth analysis of these candidate genes and the brassinosteroid sensitivity assay suggest that a Pro303Leu substitution in AVESA.00010b.r2.3AG0419820.1 could be the causal mutation of the short kernel mutant phenotype. We identified 298 oat proteins belonging to orthogroups of previously published seed shape genes, with AVESA.00010b.r2.3AG0419820.1 being the only of these affected by a SNP in the mutant. The AVESA.00010b.r2.3AG0419820.1 candidate is functionally annotated as a GSK3/SHAGGY-like kinase with homologs in Arabidopsis, wheat, barley, rice, and maize, with several of these proteins having known mutants giving rise to brassinosteroid insensitivity and shorter seeds. The substitution in AVESA.00010b.r2.3AG0419820.1 affects a residue with a known gain-of function substitution in Arabidopsis BRASSINOSTEROID-INSENSITIVE2. We propose a gain-of-function mutation in AVESA.00010b.r2.3AG0419820.1 as the most likely cause of the observed phenotype, and name the gene AsGSK2.1. The findings presented here provide potential targets for oat breeders, and a step on the way towards understanding brassinosteroid signaling, seed shape and nutrition in oats.

Abstract Background Growing interest in agrobiodiversity and sustainable agricultural practices has stimulated debates on diversifying cropping systems, furthering the potential for the reintroduction of underutilised crops. These crops may support multiple ecosystem services and enhance food security and agricultural value chains. This study used a systematic mapping approach to collate and summarise the state of research literature addresses the research question: What is the evidence for ecosystem service provision and economic value of underutilised crops? We focused on oats, triticale, hull-less barley, narrow-leaved lupin, buckwheat and faba beans due to their limited use in Europe, their broad gene pool, ecological benefits, and nutritional value. Method Three academic databases were used to identify research articles investigating the impacts of using the six underutilised crops of interest on outcomes including breeding, agronomic traits, nutrition and health, and economic values. In addition, current and recently completed European projects were searched to identify ongoing relevant research. After screening for relevance, data was extracted from all included articles and projects and imported into a spreadsheet for cross-tabulation and to produce descriptive statistics. Results From an initial 34,522 articles identified by the searches, 1346 relevant primary research articles containing 2229 studies were included. A total of 38 relevant European projects were identified, with 112 research results or goals relating to the six underutilised crops. Faba bean was the most common crop in both European projects and published literature. No current projects had a focus on hull-less barley. Agronomic traits were the most common primary research topic across the crops (56.39%), with oats and faba bean being well researched. Hull-less barley was the least studied crop across all topics. Within sub-topics related to specific ecosystem services, desirable traits, disease, weed and pest control all ranked highly, whilst invertebrate diversity and nitrogen fixation ranked lowest. Conclusion Primary research varies between crops and topics, with hull-less barley receiving the least interest. Key knowledge gaps were identified in all crops across all topics relating to breeding tools, breeding for desirable traits, agronomic traits of buckwheat, narrow-leaved lupin and hull-less barley, inclusion of the crops in human nutrition and health, and the socioeconomics of these crops. Evidence presented in this map could inform further research areas with these crops and aid future policy making for the inclusion of these crops in rotations and practices that could benefit all stakeholders along the food systems value chain.

El cultivo de la papa Solanum tuberosum L. en Colombia es clave en la seguridad alimentaria de hogares campesinos. Este sistema productivo se ve afectado por factores bióticos y abióticos, destacándose plagas de insectos como el gusano blanco Premnotrypes vorax (Hustache, 1933) que afectan la calidad del tubérculo. En este sentido es importante la generación de estrategias de manejo sostenibles para estas limitantes. Se destaca que los cultivos barrera pueden obstaculizar el paso de los adultos de P. vorax a los cultivos de papa, siendo importante evaluar cultivos con este potencial. Para esto se estableció un experimento en Mosquera, Cundinamarca (Colombia), que consistió en liberar adultos de gusano blanco en estructuras de evaluación del desplazamiento de los individuos en cultivos de avena Avena sativa Linnaeus, 1753 y cilantro Coriandrum sativum Linnaeus, 1753. Usando modelos de regresión para datos de conteo (poisson, binomial negativo y cero inflado), se encontraron diferencias estadísticamente significativas (p < 0,05) de la implementación de los cultivos de avena y cilantro como barreras naturales para reducir la entrada de adultos de P. vorax.

Rotylenchulus reniformis (reniform nematode, RN) is among the most important nematodes affecting cotton. Cultural practices, such as rotation and soil amendment, are established methods for managing RN. Management may be enhanced if crop residue has biofumigant properties against RN. The objective was to evaluate the efficacy of winter crop amendments for managing RN in the greenhouse. Reniform nematode-infested soil was amended with dry or fresh organic matter (OM, 2% w/w) from winter crops – canola, carinata, hairy vetch, oat, or no crop. Cotton was subsequently grown in this soil. Independent of the crop, dry OM amendments were more effective than no amendment at managing RN, while fresh OM amendments were not. Soil and root RN abundances and reproduction factors were generally lower in Trials 1 and 3 for dry OM than fresh OM amendments or control without OM. In Trial 2, none of the OM treatments reduced RN parameters compared with no OM control. In general, when compared to plants without RN or OM, RN did not produce significant changes in growth parameters but did affect physiology (Soil Plant Analysis Development, or SPAD, values). In conclusion, dry OM amendments can help manage RN, crop growth does not always relate to RN abundances, and SPAD values could help indicate RN presence.

Rotylenchulus reniformis (reniform nematode, RN) is an important pathogen in cotton production. Cultural practices such as crop rotation and biofumigation—management of soil pathogens by biocidal compounds from crop residues—may help manage RN. The objective of this study was to evaluate the efficacy of winter crops for RN management through combinations of rotation and crop residue incorporation in a cotton greenhouse experiment. A total of 10 treatments were evaluated in soil inoculated with RN: three winter crops (carinata, oat, or hairy vetch) grown in rotation with no shoot organic matter (OM) incorporated (1–3), fresh shoot OM incorporated (4–6), or dry shoot OM incorporated (7–9), and a fallow control (10). Roots were re-incorporated in all treatments except fallow. Subsequently, cotton was grown. Oat and fallow were better rotation crops to lower soil RN abundances at winter crop termination than hairy vetch and carinata. After the OM incorporation treatments and cotton growth, oat was generally more effective at managing RN in cotton than carinata or hairy vetch. Within each crop, incorporation treatment generally did not affect RN management. Cotton growth was not consistently affected by the treatments.

The alternative oxidase (AOX), a common terminal oxidase in the electron transfer chain (ETC) of plants, plays a crucial role in stress resilience and plant growth and development. Oat (Avena sativa), an important crop with high nutritional value, has not been comprehensively studied regarding the AsAOX gene family. Therefore, this study explored the responses and potential functions of the AsAOX gene family to various abiotic stresses and their potential evolutionary pathways. Additionally, we conducted a genome-wide analysis to explore the evolutionary conservation and divergence of AOX gene families among three Avena species (Avena sativa, Avena insularis, Avena longiglumis) and four Poaceae species (Avena sativa, Oryza sativa, Triticum aestivum, and Brachypodium distachyon). We identified 12 AsAOX, 9 AiAOX, and 4 AlAOX gene family members. Phylogenetic, motif, domain, gene structure, and selective pressure analyses revealed that most AsAOXs, AiAOXs, and AlAOXs are evolutionarily conserved. We also identified 16 AsAOX segmental duplication pairs, suggesting that segmental duplication may have contributed to the expansion of the AsAOX gene family, potentially preserving these genes through subfunctionalization. Chromosome polyploidization, gene structural variations, and gene fragment recombination likely contributed to the evolution and expansion of the AsAOX gene family as well. Additionally, we hypothesize that AsAOX2 may have potential function in resisting wounding and heat stresses, while AsAOX4 could be specifically involved in mitigating wounding stress. AsAOX11 might contribute to resistance against chromium and waterlogging stresses. AsAOX8 may have potential fuction in mitigating ABA-mediated stress. AsAOX12 and AsAOX5 are most likely to have potential function in mitigating salt and drought stresses, respectively. This study elucidates the potential evolutionary pathways of the AsAOXs gene family, explores their responses and potential functions to various abiotic stresses, identifies potential candidate genes for future functional studies, and facilitates molecular breeding applications in A. sativa.

Abstract Background In plant breeding, one of the most cost-effective and efficient ways to increase genetic gain is to reduce the breeding cycle time. In general, modern breeding methods for self-pollinated crops should strive to develop fixed lines at the lowest possible cost and in the minimum possible amount of time. Previous studies on spring oat (Avena sativa L.) showed that combining high plant density with limited soil fertility and moisture levels in a growth media like sand effectively decreases the time and cost of generating fixed single-seed descent lines. More recently, ‘speed breeding,’ or the exposure to prolonged photoperiod regimes of 22 h, has been shown to decrease flowering time in oat significantly. The goal of this study was to combine ‘speed breeding’ with high-density planting in a limited soil fertility media to reduce further the costs and time required to develop oat single-seed-descent lines. Results We grew oat plants at low density in potting-mix (control), high density in potting-mix (HD-soil), and high density in sand (HD-sand) under 16 and 22 h of day length. We observed that oat plants grown in HD-sand and exposed to 22 h day length reduced their flowering time by around 20 and 5 days on average compared to those grown in control conditions at 16 and 22 h, respectively. We also observed that 85% of plants grown at high density in sand produced a single seed when grown in bulk conditions. In contrast, only 40% of plants grown at high density in potting-mix produced a single seed. Conclusions Our novel protocol showed that oat plants grown in high-density bulks, using sand media and 22-hour day length, reduced their flowering time by 20 days compared to control conditions and produced plants with single seeds, following closely single-seed descent assumptions while significantly reducing labor costs and greenhouse space. This methodology can be deployed in oat breeding programs to help them accelerate their rate of genetic grain for multiple traits.

Background. It is important and relevant to know whether the selection among cultivars for increased stability in the weight of 1000 grains involves a significant change in grain size. The aim of the study was to analyze the relationship between the 1000 grain weight in oat, barley and wheat accessions, on the one hand, and their adaptability indicators for this trait, on the other. Material and methods. The studied material included 10 cultivars of oat, 12 of barley, and 11 of wheat from the VIR collection. Plants were grown in 2021 at five different sites over Eastern Siberia (Krasnoyarsk Territory, and the Republic of Khakassia and Tyva). After harvesting, the weight of 1000 grains was measured for each cultivar. The coefficient of environmental variation (Cv), stress tolerance index (d), homeostasis parameter (Hom), stability level index (CSL), and breeding value index (Cs) were determined to assess the cultivars for the analyzed character. Results. Oat cultivars exhibited significantly lower plasticity and higher stability in their 1000 grain weight. The best adaptability characteristics were recorded for oat cvs. ‘Argument’ and ‘Kross’, barley cvs. ‘Krasnoyarsky 91’ and ‘Biom’, and wheat cvs. ‘Novosibirskaya 49’ and ‘Novosibirskaya 75’. Cvs. ‘Kross’ and ‘Argument’ (oat). and ‘Biom’ (barley) had the largest grain size and maximum values of the character’s stability parameters. Correlations of oat and wheat grain size with both plasticity indices were negative, and positive with all stability parameters, being significant for CSL and Cs. In the case of barley cultivars, the correlation between the weight of 1000 grains and the plasticity index was negative and statistically significant. Conclusion. The results demonstrate that when selecting oat, barley and wheat for increased stability of their 1000 grain weight, the grain size will not decrease. Moreover, it may have a tendency to increase.

IntroductionWheat stem sawfly (WSS), Cephus cinctus Norton, is a major pest of common bread wheat (Triticum aestivum L.) and other cultivated cereals in North America. Planting of cultivars with solid stems has been the primary management strategy to prevent yield loss due to WSS infestation, however expression of this phenotype can vary depending on environmental conditions and solid stems hinder biological control of WSS via braconid parasitoids Bracon cephi (Gahan) and Bracon lissogaster Muesebeck. In the hollow stems of oat (Avena sativa L.), WSS larvae experience 100% mortality before they reach late instars, but the mechanisms for this observed resistance have not been characterized. ObjectiveThe objective of this study was to explore additional sources of resistance outside of the historic solid stem phenotype.MethodsHere, we use an untargeted metabolomics approach to examine the response of the metabolome of two cultivars of oat and four cultivars of spring wheat to infestation by WSS. Using liquid chromatography-mass spectrometry (LC-MS), differentially expressed metabolites were identified between oat and wheat which were associated with the phenylpropanoid pathway, phospholipid biosynthesis and signaling, the salicylic acid signaling pathway, indole-3-acetic acid (IAA) degradation, and biosynthesis of 1,4-benzoxazin-3-ones (Bxs). Several phospho- and galacto- lipids were found in higher abundance in oat, and with the exception of early stem solidness cultivar Conan, both species experienced a decrease in abundance once infested. In all wheat cultivars except Conan, an increase in abundance was observed for Bxs HMDBOA-glc and DIBOA-β-D-glucoside after infestation, indicating that this pathway is involved in wheat response to infestation in both solid and hollow stemmed cultivars. Differences between species in compounds involved in IAA biosynthesis, degradation and inactivation suggest that wheat may respond to infestation by inactivating IAA or altering the IAA pool in stem tissue.ConclusionWe propose that the species differences found here likely affect the survival of WSS larvae and may also be associated with differences in stem architecture at the molecular level. Our findings suggest pathways to focus on for future studies in elucidating plant response to WSS infestation.