21 results on '"Audra N. Iness"'
Search Results
2. Assessment of clinical continuity strategies offered by dual-degree training programs in the USA
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Samantha E. Spellicy, Elinor C. Mannon, Audra N. Iness, Hanna L. Erickson, Mariam B. Camacho, Abhik Banerjee, Jillian Liu, Alex Adami, and Neal L. Weintraub
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Physician-Scientist ,clinical continuity ,clinical training ,MD-PhD ,DO-PhD ,medical education ,Medicine - Abstract
Abstract Background: Integration of clinical skills during graduate training in dual-degree programs remains a challenge. The present study investigated the availability and self-perceived efficacy of clinical continuity strategies for dual-degree trainees preparing for clinical training. Methods: Survey participants were MD/DO-PhD students enrolled in dual-degree-granting institutions in the USA. The response rate was 95% of 73 unique institutions surveyed, representing 56% of the 124 MD-PhD and 7 DO-PhD recognized training programs. Respondents were asked to indicate the availability and self-perceived efficacy of each strategy. Results: Reported available clinical continuity strategies included clinical volunteering (95.6%), medical grand rounds (86.9%), mentored clinical experiences (84.2%), standardized patients/ practice Objective Structured Clinical Examinations (OSCEs) (70.3%), clinical case reviews (45.9%), clinical journal clubs (38.3%), and preclinical courses/review sessions (37.2%). Trainees rated standardized patients (µ = 6.98 ± 0.356), mentored clinical experiences (µ = 6.94 ± 0.301), clinical skills review sessions (µ = 6.89 ± 0.384), preclinical courses/review sessions (µ = 6.74 ± 0.482), and clinical volunteering (µ = 6.60 ± 0.369), significantly (p < 0.050) higher than clinical case review (µ = 5.34 ± 0.412), clinical journal club (µ = 4.75 ± 0.498), and medicine grand rounds (µ = 4.45 ± 0.377). Further, 84.4% of respondents stated they would be willing to devote at least 0.5–1 hour per week to clinical continuity opportunities during graduate training. Conclusion: Less than half of the institutions surveyed offered strategies perceived as the most efficacious in preparing trainees for clinical reentry, such as clinical skills review sessions. Broader implementation of these strategies could help better prepare dual-degree students for their return to clinical training.
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- 2022
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3. Oncogenic B-Myb Is Associated With Deregulation of the DREAM-Mediated Cell Cycle Gene Expression Program in High Grade Serous Ovarian Carcinoma Clinical Tumor Samples
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Audra N. Iness, Lisa Rubinsak, Steven J. Meas, Jessica Chaoul, Sadia Sayeed, Raghavendra Pillappa, Sarah M. Temkin, Mikhail G. Dozmorov, and Larisa Litovchick
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MYBL2 ,DYRK1A ,cancer genome atlas ,protein complex ,transcription ,FoxM1 ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Cell cycle control drives cancer progression and treatment response in high grade serous ovarian carcinoma (HGSOC). MYBL2 (encoding B-Myb), an oncogene with prognostic significance in several cancers, is highly expressed in most HGSOC cases; however, the clinical significance of B-Myb in this disease has not been well-characterized. B-Myb is associated with cell proliferation through formation of the MMB (Myb and MuvB core) protein complex required for transcription of mitotic genes. High B-Myb expression disrupts the formation of another transcriptional cell cycle regulatory complex involving the MuvB core, DREAM (DP, RB-like, E2F, and MuvB), in human cell lines. DREAM coordinates cell cycle dependent gene expression by repressing over 800 cell cycle genes in G0/G1. Here, we take a bioinformatics approach to further evaluate the effect of B-Myb expression on DREAM target genes in HGSOC and validate our cellular model with clinical specimens. We show that MYBL2 is highly expressed in HGSOC and correlates with expression of DREAM and MMB target genes in both The Cancer Genome Atlas (TCGA) as well as independent analyses of HGSOC primary tumors (N = 52). High B-Myb expression was also associated with poor overall survival in the TCGA cohort and analysis by a DREAM target gene expression signature yielded a negative impact on survival. Together, our data support the conclusion that high expression of MYBL2 is associated with deregulation of DREAM/MMB-mediated cell cycle gene expression programs in HGSOC and may serve as a prognostic factor independent of its cell cycle role. This provides rationale for further, larger scale studies aimed to determine the clinical predictive value of the B-Myb gene expression signature for treatment response as well as patient outcomes.
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- 2021
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4. Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters
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Aimee H. Marceau, Jessica G. Felthousen, Paul D. Goetsch, Audra N. Iness, Hsiau-Wei Lee, Sarvind M. Tripathi, Susan Strome, Larisa Litovchick, and Seth M. Rubin
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Science - Abstract
The MuvB complex, which regulates cell cycle dependent gene expression, binds promoter cell cycle genes homology region (CHR) elements. Here the authors solve the structure of LIN54, a component of MuvB, bound to DNA and use it to explain the recognition of a CHR sequence.
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- 2016
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5. MuvB: A Key to Cell Cycle Control in Ovarian Cancer
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Audra N. Iness and Larisa Litovchick
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p130 ,B-Myb ,DYRK1A ,protein complex ,transcription ,cell cycle ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Cancer cells are characterized by uncontrolled proliferation, whereas the ability to enter quiescence or dormancy is important for cancer cell survival and disease recurrence. Therefore, understanding the mechanisms regulating cell cycle progression and exit is essential for improving patient outcomes. The MuvB complex of five proteins (LIN9, LIN37, LIN52, RBBP4, and LIN54), also known as LINC (LIN complex), is important for coordinated cell cycle gene expression. By participating in the formation of three distinct transcriptional regulatory complexes, including DREAM (DP, RB-like, E2F, and MuvB), MMB (Myb-MuvB), and FoxM1–MuvB, MuvB represents a unique regulator mediating either transcriptional activation (during S–G2 phases) or repression (during quiescence). With no known enzymatic activities in any of the MuvB-associated complexes, studies have focused on the therapeutic potential of protein kinases responsible for initiating DREAM assembly or downstream enzymatic targets of MMB. Furthermore, the mechanisms governing the formation and activity of each complex (DREAM, MMB, or FoxM1–MuvB) may have important consequences for therapeutic response. The MMB complex is associated with prognostic markers of aggressiveness in several cancers, whereas the DREAM complex is tied to disease recurrence through its role in maintaining quiescence. Here, we review recent developments in our understanding of MuvB function in the context of cancer. We specifically highlight the rationale for additional investigation of MuvB in high-grade serous ovarian cancer and the need for further translational research.
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- 2018
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6. DREAM On: Cell Cycle Control in Development and Disease
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Hayley Walston, Audra N. Iness, and Larisa Litovchick
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Proteomics ,Genome integrity ,Cell growth ,Cell Cycle ,fungi ,Cell Cycle Proteins ,Cell Cycle Checkpoints ,Disease ,Cell cycle ,Biology ,Cell biology ,Repressor Proteins ,Cell cycle control ,Gene expression ,Genetics ,FOXM1 ,Animals ,Caenorhabditis elegans ,Caenorhabditis elegans Proteins ,E2F - Abstract
Perfectly orchestrated periodic gene expression during cell cycle progression is essential for maintaining genome integrity and ensuring that cell proliferation can be stopped by environmental signals. Genetic and proteomic studies during the past two decades revealed remarkable evolutionary conservation of the key mechanisms that control cell cycle–regulated gene expression, including multisubunit DNA-binding DREAM complexes. DREAM complexes containing a retinoblastoma family member, an E2F transcription factor and its dimerization partner, and five proteins related to products of Caenorhabditis elegans multivulva (Muv) class B genes lin-9, lin-37, lin-52, lin-53, and lin-54 (comprising the MuvB core) have been described in diverse organisms, from worms to humans. This review summarizes the current knowledge of the structure, function, and regulation of DREAM complexes in different organisms, as well as the role of DREAM in human disease.
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- 2021
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7. The Effect of Hospital Visitor Policies on Patients, Their Visitors, and Health Care Providers During the COVID-19 Pandemic: A Systematic Review
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Audra N. Iness, Jefferson O. Abaricia, Wendemi Sawadogo, Caleb M. Iness, Max Duesberg, John Cyrus, and Vinay Prasad
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Policy ,SARS-CoV-2 ,Health Personnel ,COVID-19 ,Humans ,General Medicine ,Pandemics ,Hospitals - Abstract
Health care policymaking during the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) pandemic has questioned the precedent of restricting hospital visitors. We aimed to synthesize available data describing the resulting impact on patient, family/visitor, and health care provider well-being. We systematically reviewed articles from the World Health Organization COVID-19 Global Literature on Coronavirus Disease Database published between December 2019 through April 2021. Included studies focused on hospitalized patients and reported 1 or more prespecified main or secondary outcome (coronavirus disease 2019 [COVID-19] disease transmission, global well-being, mortality, morbidity, or health care resource utilization). Two authors independently extracted data into a standardized form with a third author resolving discrepancies. A total of 1153 abstracts were screened, and 26 final full-text articles were included. Ten studies were qualitative, with 7 cohort studies, and no randomized controlled trials. Critically ill patients were the most represented (12 out of 26 studies). Blanket hospital visitor policies were associated with failure to address the unique needs of patients, their visitors, and health care providers in various clinical environments. Overall, a patient-centered, thoughtful, and nuanced approach to hospital visitor policies is likely to benefit all stakeholders while minimizing potential harms.
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- 2022
8. Waiting to 'make it' versus 'making it happen': empowering physician-scientists in training
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Audra N. Iness
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Medical education ,Biomedical Research ,Extramural ,APSA Presidential Address ,MEDLINE ,Internship and Residency ,Cultural Diversity ,General Medicine ,Training Support ,Training (civil) ,United States ,Physicians ,Cultural diversity ,Presidential address ,Humans ,Association (psychology) ,Psychology ,Minority Groups ,Societies, Medical - Published
- 2019
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9. Circumferential electrical neck burns caused by a phone charger in a teenage male
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Kristen L. Murphy, Audra N. Iness, and Esther M. Sampayo
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Emergency Medicine - Published
- 2022
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10. Role of phosphodiesterase 1 in the pathophysiology of diseases and potential therapeutic opportunities
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Rakesh C. Kukreja, Sakthivel Muniyan, Anindita Das, Navin Vigneshwar, Pin-Lan Li, Arun Samidurai, Surinder K. Batra, Lei Xi, Dinender K. Singla, and Audra N. Iness
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0301 basic medicine ,Gene isoform ,Calmodulin ,PDE1 ,Biology ,Article ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Drug Therapy ,Guanosine monophosphate ,Cyclic AMP ,Humans ,Pharmacology (medical) ,Cyclic adenosine monophosphate ,Disease ,Cyclic GMP ,Pharmacology ,chemistry.chemical_classification ,Phosphodiesterase ,Cell biology ,030104 developmental biology ,Enzyme ,chemistry ,Phosphodiesterase I ,030220 oncology & carcinogenesis ,Second messenger system ,biology.protein ,Signal Transduction - Abstract
Cyclic nucleotide phosphodiesterases (PDEs) are superfamily of enzymes that regulate the spatial and temporal relationship of second messenger signaling in the cellular system. Among the 11 different families of PDEs, phosphodiesterase 1 (PDE1) sub-family of enzymes hydrolyze both 3’,5’-cyclic adenosine monophosphate (cAMP) and 3’,5’-cyclic guanosine monophosphate (cGMP) in a mutually competitive manner. The catalytic activity of PDE1 is stimulated by their binding to Ca(2+)/calmodulin (CaM), resulting in the integration of Ca(2+) and cyclic nucleotide-mediated signaling in various diseases. The PDE1 family includes three subtypes, PDE1A, PDE1B and PDE1C, which differ for their relative affinities for cAMP and cGMP. These isoforms are differentially expressed throughout the body, including the cardiovascular, central nervous system and other organs. Thus, PDE1 enzymes play a critical role in the pathophysiology of diseases through the fundamental regulation of cAMP and cGMP signaling. This comprehensive review provides the current research on PDE1 and its potential utility as a therapeutic target in diseases including the cardiovascular, pulmonary, metabolic, neurocognitive, renal, cancers and possibly others.
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- 2021
11. Restoring the DREAM Complex Inhibits the Proliferation of High-Risk HPV Positive Human Cells
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Mikhail G. Dozmorov, Audra N. Iness, Tara J. Nulton, Jessica Felthousen-Rusbasan, Iain M. Morgan, Claire D. James, Brad Windle, Siddharth Saini, Larisa Litovchick, Fatmata Sesay, and Kevin Ko
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Cancer Research ,cervical cancer ,Biology ,medicine.disease_cause ,lcsh:RC254-282 ,Article ,law.invention ,Transcriptional repressor complex ,law ,medicine ,DREAM complex ,E2F ,human papillomavirus ,E7 ,oncogenic transformation ,protein complex ,Retinoblastoma protein ,Cancer ,DREAM ,Cell cycle ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,medicine.disease ,humanities ,Oncology ,Cancer research ,biology.protein ,Suppressor ,cell cycle ,head and neck cancer ,biological phenomena, cell phenomena, and immunity ,Carcinogenesis ,transcription ,psychological phenomena and processes - Abstract
Simple Summary Human papillomaviruses are responsible for around 5% of all cancers, and to date there are no anti-viral therapeutics available for treating these cancers. In this report we demonstrate that in HPV positive cells the transcriptional repressor DREAM complex is disrupted by E7 proteins, with a resulting increase in expression of DREAM target genes. Expression of a mutant DREAM component, LIN52 S20C, competes with E7 and partially rescues DREAM complex formation. This restoration attenuates the growth of HPV positive cells, including HPV positive cervical cancer cell lines. We propose that restoration of the DREAM complex in HPV positive cancers is a novel therapeutic approach that could be adapted to aid in the treatment of these cancers. Abstract High-risk (HR) human papillomaviruses are known causative agents in 5% of human cancers including cervical, ano-genital and head and neck carcinomas. In part, HR-HPV causes cancer by targeting host-cell tumor suppressors including retinoblastoma protein (pRb) and RB-like proteins p107 and p130. HR-HPV E7 uses a LxCxE motif to bind RB proteins, impairing their ability to control cell-cycle dependent transcription. E7 disrupts DREAM (Dimerization partner, RB-like, E2F and MuvB), a transcriptional repressor complex that can include p130 or p107, but not pRb, which regulates genes required for cell cycle progression. However, it is not known whether disruption of DREAM plays a significant role in HPV-driven tumorigenesis. In the DREAM complex, LIN52 is an adaptor that binds directly to p130 via an E7-like LxSxE motif. Replacement of the LxSxE sequence in LIN52 with LxCxE (LIN52-S20C) increases p130 binding and partially restores DREAM assembly in HPV-positive keratinocytes and human cervical cancer cells, inhibiting proliferation. Our findings demonstrate that disruption of the DREAM complex by E7 is an important process promoting cellular proliferation by HR-HPV. Restoration of the DREAM complex in HR-HPV positive cells may therefore have therapeutic benefits in HR-HPV positive cancers.
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- 2021
12. The cell cycle regulatory DREAM complex is disrupted by high expression of oncogenic B-Myb
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Larisa Litovchick, Seth M. Rubin, Mikhail G. Dozmorov, Keelan Z. Guiley, Siddharth Saini, Audra N. Iness, Varsha Ananthapadmanabhan, Jessica Felthousen, and Fatmata Sesay
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0301 basic medicine ,Cancer Research ,Clinical Sciences ,Oncology and Carcinogenesis ,Breast Neoplasms ,Cell Cycle Proteins ,Biology ,Article ,Cell Line ,03 medical and health sciences ,0302 clinical medicine ,Cell Line, Tumor ,Genetics ,Humans ,DREAM complex ,RBBP4 ,Oncology & Carcinogenesis ,harmine ,Molecular Biology ,Psychological repression ,Mitosis ,Regulation of gene expression ,Ovarian Neoplasms ,Neoplastic ,Tumor ,Cell growth ,protein complex ,Cell Cycle ,Kv Channel-Interacting Proteins ,DYRK1A ,Cell cycle ,Cell Cycle Gene ,3. Good health ,Cell biology ,Neoplasm Proteins ,Gene Expression Regulation, Neoplastic ,Repressor Proteins ,030104 developmental biology ,Gene Expression Regulation ,030220 oncology & carcinogenesis ,Multiprotein Complexes ,protein degradation ,Trans-Activators ,Female ,transcription - Abstract
Overexpression of the oncogene MYBL2 (B-Myb) is associated with increased cell proliferation and serves as a marker of poor prognosis in cancer. However, the mechanism by which B-Myb alters the cell cycle is not fully understood. In proliferating cells, B-Myb interacts with the MuvB core complex including LIN9, LIN37, LIN52, RBBP4, and LIN54, forming the MMB (Myb-MuvB) complex, and promotes transcription of genes required for mitosis. Alternatively, the MuvB core interacts with Rb-like protein p130 and E2F4-DP1 to form the DREAM complex that mediates global repression of cell cycle genes in G0/G1, including a subset of MMB target genes. Here, we show that overexpression of B-Myb disrupts the DREAM complex in human cells, and this activity depends on the intact MuvB-binding domain in B-Myb. Furthermore, we found that B-Myb regulates the protein expression levels of the MuvB core subunit LIN52, a key adapter for assembly of both the DREAM and MMB complexes, by a mechanism that requires S28 phosphorylation site in LIN52. Given that high expression of B-Myb correlates with global loss of repression of DREAM target genes in breast and ovarian cancer, our findings offer mechanistic insights for aggressiveness of cancers with MYBL2 amplification, and establish the rationale for targeting B-Myb to restore cell cycle control.
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- 2018
13. Training the physician-scientist: views from program directors and aspiring young investigators
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Mark W. Geraci, Mone Zaidi, Jeremie M. Lever, Rebecca M. Baron, Peter S. Klein, Patrick J. Hu, Robert A. Baiocchi, Melvin Blanchard, Linda L. Demer, Lawrence F. Brass, Robert A. Salata, Olujimi A. Ajijola, Audra N. Iness, Michael P. Madaio, Jatin M. Vyas, Alexander J. Adami, and Christopher S. Williams
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0301 basic medicine ,Biomedical Research ,Students, Medical ,MEDLINE ,Awards and Prizes ,Institutional support ,Training (civil) ,Education ,03 medical and health sciences ,0302 clinical medicine ,Physicians ,Surveys and Questionnaires ,Humans ,030212 general & internal medicine ,Fellowship training ,Societies, Medical ,Medical education ,Career Choice ,Education, Medical ,General Medicine ,Training Support ,Research Personnel ,United States ,030104 developmental biology ,Alliance ,National Institutes of Health (U.S.) ,Charities ,Education, Medical, Graduate ,Workforce ,Perspective ,Postgraduate training ,Psychology ,Career choice ,Foundations - Abstract
There is growing concern that the physician-scientist is endangered due to a leaky training pipeline and prolonged time to scientific independence (1). The NIH Physician-Scientist Workforce Working Group has concluded that as many as 1,000 individuals will need to enter the pipeline each year to sustain the workforce (2). Moreover, surveys of postgraduate training programs document considerable variability in disposition and infrastructure (3). Programs can be broadly grouped into two classes: physician-scientist training programs (PSTPs) that span residency and fellowship training, and research-in-residency programs (RiRs), which are limited to residency but trainees are able to match into PSTPs upon transitioning to fellowship (Figure 1). Funding sources for RiRs and PSTPs are varied and include NIH KL2 and T32 awards, charitable foundations, philanthropy, and institutional support. Furthermore, standards for research training and tools for evaluating programmatic success are lacking. Here, we share consensus generated from iterative workshops hosted by the Alliance of Academic Internal Medicine (AAIM) and the student-led American Physician Scientists Association (APSA).
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- 2018
14. Structural mechanism of Myb–MuvB assembly
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Seth M. Rubin, Sarvind Tripathi, Siddharth Saini, Larisa Litovchick, Audra N. Iness, Keelan Z. Guiley, and Joseph S. Lipsick
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0301 basic medicine ,Scaffold protein ,animal structures ,Cell Cycle Proteins ,Crystallography, X-Ray ,Cell Line ,03 medical and health sciences ,Protein Domains ,Neoplasms ,Gene expression ,Humans ,MYB ,Transcription factor ,Gene ,Multidisciplinary ,Chemistry ,Mechanism (biology) ,Tumor Suppressor Proteins ,Cell Cycle ,Signal transducing adaptor protein ,Nuclear Proteins ,Cell cycle ,Biological Sciences ,Cell biology ,Neoplasm Proteins ,030104 developmental biology ,Multiprotein Complexes ,Trans-Activators - Abstract
The MuvB transcriptional regulatory complex, which controls cell-cycle-dependent gene expression, cooperates with B-Myb to activate genes required for the G2 and M phases of the cell cycle. We have identified the domain in B-Myb that is essential for the assembly of the Myb–MuvB (MMB) complex. We determined a crystal structure that reveals how this B-Myb domain binds MuvB through the adaptor protein LIN52 and the scaffold protein LIN9. The structure and biochemical analysis provide an understanding of how oncogenic B-Myb is recruited to regulate genes required for cell-cycle progression, and the MMB interface presents a potential therapeutic target to inhibit cancer cell proliferation.
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- 2018
15. MuvB: A Key to Cell Cycle Control in Ovarian Cancer
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Larisa Litovchick and Audra N. Iness
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0301 basic medicine ,Cancer Research ,p130 ,Mini Review ,protein complex ,Regulator ,B-Myb ,DYRK1A ,Biology ,Cell cycle ,lcsh:Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Cell Cycle Gene ,lcsh:RC254-282 ,3. Good health ,03 medical and health sciences ,030104 developmental biology ,Oncology ,Cancer cell ,Cancer research ,RBBP4 ,DREAM complex ,cell cycle ,E2F ,transcription ,Transcription factor - Abstract
Cancer cells are characterized by uncontrolled proliferation, whereas the ability to enter quiescence or dormancy is important for cancer cell survival and disease recurrence. Therefore, understanding the mechanisms regulating cell cycle progression and exit is essential for improving patient outcomes. The MuvB complex of five proteins (LIN9, LIN37, LIN52, RBBP4, and LIN54), also known as LINC (LIN complex), is important for coordinated cell cycle gene expression. By participating in the formation of three distinct transcriptional regulatory complexes, including DREAM (DP, RB-like, E2F, and MuvB), MMB (Myb-MuvB), and FoxM1-MuvB, MuvB represents a unique regulator mediating either transcriptional activation (during S-G2 phases) or repression (during quiescence). With no known enzymatic activities in any of the MuvB-associated complexes, studies have focused on the therapeutic potential of protein kinases responsible for initiating DREAM assembly or downstream enzymatic targets of MMB. Furthermore, the mechanisms governing the formation and activity of each complex (DREAM, MMB, or FoxM1-MuvB) may have important consequences for therapeutic response. The MMB complex is associated with prognostic markers of aggressiveness in several cancers, whereas the DREAM complex is tied to disease recurrence through its role in maintaining quiescence. Here, we review recent developments in our understanding of MuvB function in the context of cancer. We specifically highlight the rationale for additional investigation of MuvB in high-grade serous ovarian cancer and the need for further translational research.
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- 2018
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16. The cell cycle gene regulatory DREAM complex is disrupted by high expression of oncogenic B-Myb
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Mikhail G. Dozmorov, Audra N. Iness, Varsha Ananthapadmanabhan, Seth M. Rubin, Jessica Felthousen, Keelan Z. Guiley, and Larisa Litovchick
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0303 health sciences ,Gene knockdown ,Cell growth ,Cell cycle ,Biology ,Cell Cycle Gene ,humanities ,3. Good health ,Cell biology ,03 medical and health sciences ,0302 clinical medicine ,030220 oncology & carcinogenesis ,RBBP4 ,DREAM complex ,E2F ,Mitosis ,psychological phenomena and processes ,030304 developmental biology - Abstract
The oncogeneMYBL2(encoding B-Myb) is a poor prognostic biomarker in many cancers. B-Myb interacts with the MuvB core of five proteins (LIN9, LIN37, LIN52, LIN53/RBBP4, and LIN54) to form the MMB (Myb-MuvB) complex and promotes expression of late cell cycle genes necessary for progression through mitosis. BothMYBL2amplification and over-expression are associated with deregulation of the cell cycle and increased cell proliferation. Alternatively, by interacting with E2F4-DP1 and p130 or p107, the MuvB core becomes part of the DREAM complex (DP, RB-like, E2F, and MuvB). The DREAM complex opposes MMB by globally repressing cell cycle genes in G0/G1, maintaining the cell in a quiescent state. However, the specific mechanism by which B-Myb alters the cell cycle is not well understood. Our analysis of The Cancer Genome Atlas data revealed significant upregulation of DREAM and MMB target genes in breast and ovarian cancer withMYBL2gain. Given that most of the DREAM target genes are not directly regulated by B-Myb, we investigated the effects of B-Myb on DREAM formation. We found that depletion of B-Myb results in increased DREAM formation in human cancer cells, while its overexpression inhibits DREAM formation in the non-transformed cells. Since the MuvB core subunit LIN52 is essential for assembly of both the DREAM and MMB complexes, we tested whether B-Myb disrupts DREAM by sequestering LIN52. Overexpression of LIN52 did not increase either DREAM or MMB formation, but instead increased the turnover rate of the endogenous LIN52 protein. Interestingly, co-expression of B-Myb increased the expression of both endogenous and overexpressed LIN52 while knockdown of B-Myb had an opposite effect. We found that regulation of LIN52 occurs at the protein level, and that activity of DYRK1A kinase, the enzyme that triggers DREAM complex formation by phosphorylating LIN52, is required for this regulation. These findings are the first to implicate B-Myb in the disassembly of the DREAM complex and offer insight into the underlying mechanisms of poor prognostic value ofMYBL2amplification in cancer. We conclude that B-Myb mediates its oncogenic effects not only by increasing mitotic gene expression by the MMB complex, but also by broad disruption of cell cycle gene regulatory programs through compromised DREAM formation.
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- 2017
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17. Abstract GMM-031: CLINICAL PATHOLOGIC EXPRESSION OF CELL CYCLE REGULATORY COMPLEXES IN HIGH GRADE SEROUS OVARIAN CARCINOMA
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Mikhail G. Dozmorov, Larisa Litovchick, Cora Uram-Tuculescu, Sarah M. Temkin, Audra N. Iness, Jessica Chaoul, and Lisa A. Rubinsak
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Cancer Research ,Serous fluid ,Oncology ,business.industry ,Ovarian carcinoma ,Cancer research ,Medicine ,Cell cycle ,business - Abstract
INTRODUCTION: Cell cycle control is an important determinant of cancer progression and treatment response. Two key transcriptional regulatory complexes, DREAM and MMB, ensure coordinated cell cycle dependent gene expression. Though these complexes contain the same protein core called MuvB, they have opposing functions. The DREAM (DP, RB-like, E2F, and MuvB) complex represses over 800 cell cycle genes in G0/G1 and the MMB (Myb-MuvB) complex promotes mitotic gene expression. High expression of B-Myb, an oncogenic transcription factor involved in the MMB complex, is associated with cell cycle deregulation and poor prognosis in several cancers, including ovarian cancer. High B-Myb expression disrupts DREAM formation in human cell lines, resulting in increased proliferation. Previous analysis of TCGA data showed that MYBL2 (encoding B-Myb) undergoes gene copy number gain in 55% of high grade serous ovarian cancer (HGSOC) tumor samples and is associated with poor overall survival. We sought to validate these findings with clinical specimens and to investigate the role of DREAM- and MMB-regulated gene expression in HGSOC patient outcomes. METHODS: We used expression levels of DREAM-and MMB-controlled genes as a functional readout for the status of these opposing transcriptional regulators. This retrospective study utilized tissue bank surgical pathology and cytology samples taken from 52 HGSOC lesions. RT-qPCR gene expression analysis was correlated to clinical and pathologic findings. Demographic information, follow-up, treatment, and outcomes data (age, Stage, optimal debulking, platinum sensitivity, survival) was obtained by chart review. Analyses of TCGA datasets were conducted in parallel. RESULTS: RT-qPCR analysis of DREAM target genes (AURKA, KIF23, CCNB2, and FOXM1) revealed positive and significant correlations between MYBL2 and all genes tested: AURKA (ρ=0.4114, p CONCLUSIONS: Increased expression of selected cell cycle genes correlates to increased formation of MMB, and reduced DREAM assembly in HGSOC tissue. High expression of MYBL2 is associated with deregulated cell cycle gene expression programs in HGSOC. Larger scale studies would clarify the clinical prognostic value of the DREAM- and MMB-regulated gene expression. Citation Format: Audra N. Iness, Lisa Rubinsak, Jessica Chaoul, Mikhail Dozmorov, Cora Uram-Tuculescu, Larisa Litovchick, Sarah Temkin. CLINICAL PATHOLOGIC EXPRESSION OF CELL CYCLE REGULATORY COMPLEXES IN HIGH GRADE SEROUS OVARIAN CARCINOMA [abstract]. In: Proceedings of the 12th Biennial Ovarian Cancer Research Symposium; Sep 13-15, 2018; Seattle, WA. Philadelphia (PA): AACR; Clin Cancer Res 2019;25(22 Suppl):Abstract nr GMM-031.
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- 2019
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18. Non-small cell lung cancer is susceptible to induction of DNA damage responses and inhibition of angiogenesis by telomere overhang oligonucleotides
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Ravi Salgia, Richard E. Mulnix, Neelu Puri, Yutong Zhao, Connie Vitali, Ryan T. Pitman, Audra N. Iness, and Terrianne Erickson
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Cyclin-Dependent Kinase Inhibitor p21 ,Male ,Vascular Endothelial Growth Factor A ,Senescence ,Cancer Research ,Programmed cell death ,DNA damage ,Angiogenesis ,Oligonucleotides ,Mice, Nude ,Bronchi ,Biology ,Article ,Mice ,In vivo ,Carcinoma, Non-Small-Cell Lung ,Cell Line, Tumor ,Animals ,Humans ,Genetic Predisposition to Disease ,Cellular Senescence ,Cell Proliferation ,Neovascularization, Pathologic ,Basic Helix-Loop-Helix Leucine Zipper Transcription Factors ,Oligonucleotide ,Tumor Suppressor Proteins ,Intracellular Signaling Peptides and Proteins ,Nuclear Proteins ,Epithelial Cells ,Telomere ,Gene Expression Regulation, Neoplastic ,Oncology ,Apoptosis ,Cancer research ,Cyclin-Dependent Kinase Inhibitor p27 ,Inhibitor of Growth Protein 1 ,Neoplasm Transplantation ,DNA Damage ,Signal Transduction - Abstract
Exposure of the telomere overhang acts as a DNA damage signal, and exogenous administration of an 11-base oligonucleotide homologous to the 3′-telomere overhang sequence (T-oligo) mimics the effects of overhang exposure by inducing senescence and cell death in non-small cell lung cancer (NSCLC) cells, but not in normal bronchial epithelial cells. T-oligo-induced decrease in cellular proliferation in NSCLC is likely directed through both p53 and its homolog, p73, with subsequent induction of senescence and expression of senescence-associated proteins, p21, p33 ING , and p27 Kip1 both in vivo and in vitro . Additionally, T-oligo decreases tumor size and inhibits angiogenesis through decreased VEGF signaling and increased TSP-1 expression.
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- 2014
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19. Structural basis for LIN54 recognition of CHR elements in cell cycle-regulated promoters
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Seth M. Rubin, Larisa Litovchick, Hsiau-Wei Lee, Susan Strome, Aimee H. Marceau, Sarvind Tripathi, Jessica Felthousen, Paul D. Goetsch, and Audra N. Iness
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0301 basic medicine ,Science ,1.1 Normal biological development and functioning ,Protein domain ,General Physics and Astronomy ,Sequence Homology ,Biology ,Crystallography, X-Ray ,Article ,General Biochemistry, Genetics and Molecular Biology ,Cell Line ,Promoter Regions ,03 medical and health sciences ,Genetic ,Protein Domains ,Underpinning research ,Sequence Homology, Nucleic Acid ,Consensus Sequence ,Medicine and Health Sciences ,Consensus sequence ,Genetics ,Nucleosome ,Humans ,Amino Acid Sequence ,Promoter Regions, Genetic ,Peptide sequence ,Transcription factor ,Gene ,Multidisciplinary ,Crystallography ,Binding Sites ,Base Sequence ,Nucleic Acid ,Cell Cycle ,Promoter ,General Chemistry ,DNA ,Cell Cycle Gene ,Cell biology ,Nucleosomes ,030104 developmental biology ,Generic Health Relevance ,Trans-Activators ,X-Ray ,Tyrosine ,Protein Binding - Abstract
The MuvB complex recruits transcription factors to activate or repress genes with cell cycle-dependent expression patterns. MuvB contains the DNA-binding protein LIN54, which directs the complex to promoter cell cycle genes homology region (CHR) elements. Here we characterize the DNA-binding properties of LIN54 and describe the structural basis for recognition of a CHR sequence. We biochemically define the CHR consensus as TTYRAA and determine that two tandem cysteine rich regions are required for high-affinity DNA association. A crystal structure of the LIN54 DNA-binding domain in complex with a CHR sequence reveals that sequence specificity is conferred by two tyrosine residues, which insert into the minor groove of the DNA duplex. We demonstrate that this unique tyrosine-mediated DNA binding is necessary for MuvB recruitment to target promoters. Our results suggest a model in which MuvB binds near transcription start sites and plays a role in positioning downstream nucleosomes., The MuvB complex, which regulates cell cycle dependent gene expression, binds promoter cell cycle genes homology region (CHR) elements. Here the authors solve the structure of LIN54, a component of MuvB, bound to DNA and use it to explain the recognition of a CHR sequence.
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- 2016
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20. Abstract 4288: The cell cycle gene regulatory DREAM complex is disrupted by oncogenic B-Myb
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Larisa Litovchick, Fatmata Sesay, Audra N. Iness, Varsha Ananthapadmanabhan, and Mikhail G. Dozmorov
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Cancer Research ,Oncology ,DREAM complex ,Cell cycle ,Biology ,Gene ,Cell biology - Abstract
The oncogene MYBL2 (encoding B-Myb) is a poor prognostic biomarker in many cancers. B-Myb interacts with the MuvB core of five proteins (LIN9, LIN37, LIN52, LIN53/RBBP4, and LIN54) to form the MMB (Myb-MuvB) complex and promotes expression of late cell cycle genes necessary for progression through mitosis. Both MYBL2 amplification and over-expression are associated with deregulation of the cell cycle and increased cell proliferation. Alternatively, by interacting with E2F4-DP1 and p130/p107, the MuvB core becomes part of the DREAM complex (DP, RB-like, E2F, and MuvB). The DREAM complex opposes MMB by globally repressing cell cycle genes in G0/G1, maintaining the cell in a quiescent state. However, the specific mechanism by which B-Myb alters the cell cycle is not well understood. Herein, we show that B-Myb disrupts the DREAM complex by sequestration and stabilization of LIN52. Analysis of The Cancer Genome Atlas data revealed significant upregulation of DREAM and MMB target genes in breast and ovarian cancer with MYBL2 gain. Given that most of the DREAM target genes are not directly regulated by B-Myb, we investigated the effects of B-Myb on DREAM formation. We found that depletion of B-Myb results in increased DREAM formation in cancer cell lines, while its overexpression inhibits DREAM formation in non-transformed cells. Since the MuvB core subunit LIN52 is essential for assembly of both the DREAM and MMB complexes, we tested whether B-Myb disrupts DREAM by sequestering LIN52. Overexpression of LIN52 did not increase either DREAM or MMB formation, but instead increased the turnover rate of the endogenous LIN52 protein. Interestingly, co-expression of B-Myb increased the expression of both endogenous and overexpressed LIN52 while knockdown of B-Myb had an opposite effect. We found that regulation of LIN52 occurs at the protein level, and that activity of DYRK1A kinase, the enzyme that triggers DREAM complex formation by phosphorylating LIN52, is required for this regulation. These findings are the first to implicate B-Myb in the disassembly of the DREAM complex and offer further mechanistic insights for cancers with MYBL2 amplification. We conclude that B-Myb's oncogenic effects are not only secondary to increased mitotic gene expression by the MMB complex, but also broad disruption of cell cycle gene regulatory programs through compromised DREAM formation. Citation Format: Audra N. Iness, Varsha Ananthapadmanabhan, Fatmata Sesay, Mikhail Dozmorov, Larisa Litovchick. The cell cycle gene regulatory DREAM complex is disrupted by oncogenic B-Myb [abstract]. In: Proceedings of the American Association for Cancer Research Annual Meeting 2018; 2018 Apr 14-18; Chicago, IL. Philadelphia (PA): AACR; Cancer Res 2018;78(13 Suppl):Abstract nr 4288.
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- 2018
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21. Abstract 2116: Therapeutic potential of T-Oligo and role of tankyrase in its mechanism of action
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Neelu Puri, Terrianne Erickson, and Audra N. Iness
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Senescence ,Cancer Research ,Telomerase ,DNA damage ,Angiogenesis ,Cancer ,Biology ,medicine.disease ,Telomere ,Oncology ,Downregulation and upregulation ,Apoptosis ,Immunology ,medicine ,Cancer research - Abstract
When telomeres are disrupted, exposure of the single stranded 3’ overhang triggers DNA damage pathways resulting in cell senescence and apoptosis. T-oligo, an oligonucleotide homologous to the 3’ overhang, mimics telomere exposure inducing p53 /p73 associated damage responses in malignant cells with negligible effects on normal tissues. To test the ability of T-oligo as a therapeutic agent, subcutaneous NSCLC tumors were established in nude mice which were given daily intratumoral injections (60 nmoles) of T-oligo or a complementary oligonucleotide for 6 weeks. SW1573 and H358 tumors treated with T-oligo exhibited a 5.6 and 4.3 fold reduction in tumor size respectively. Examination of tumor sections for senescence using β-galactosidase revealed that both H358 and SW1573 exhibited strong staining for senescence compared to controls. Staining for angiogenesis and vasculogenesis in H358 and SW1573 displayed 2.2 fold and 3 fold reduction, respectively. These results indicate that T-oligo not only reduced tumor size and vessel density, but also induced senescence suggesting that T-oligo, may be a molecularly targeted cancer therapy. To test the efficacy of T-oligo after IV delivery subcutaneous melanoma tumors were treated with IV T-oligo (78 nmoles) for 4 weeks which resulted in a 3.7 fold reduction in T-oligo treated tumor volume. These tumors are further being evaluated for angiogenesis and vasculogenesis. The role of poly (ADP-ribose) polymerase, tankyrase-1, in T-oligo mediated DNA damage responses was assessed using XAV939, a tankyrase inhibitor. Tankyrase-1 parsylates TRF1, releasing it from the telomere, allowing telomerase to access telomeric DNA thereby increasing telomere length. TRF1, a protein associated with the protective telomere T-loop structure, negatively controls telomere length. Since TRF1 plays a role in the stability of the shelterin complex (a specialized set of proteins responsible for maintaining the DNA T-loop structure), immunoblots were made for AN (melanoma) and H358 (lung cancer) cell lines and probed for TRF1. Preliminary results indicate 1.7 fold downregulation of TRF1 upon treatment with T-oligo and a negligible difference in the presence of a combination of T-oligo and XAV939. T-oligo treatment also induced a 2.6 fold upregulation of TRF-2 and treatment with T-oligo and XAV939 reduced this upregulation to 1 fold suggesting that T-oligo may only stabilizes part of the free shelterin complex and the rest is degraded by the cell. These results suggest that tankyrase-1 maybe involved in T-oligo mediated signaling and maybe associated with the shelterin complex upon parsylation of TRF1. Citation Format: Terrianne Erickson, Audra N. Iness, Neelu Puri. Therapeutic potential of T-Oligo and role of tankyrase in its mechanism of action. [abstract]. In: Proceedings of the 104th Annual Meeting of the American Association for Cancer Research; 2013 Apr 6-10; Washington, DC. Philadelphia (PA): AACR; Cancer Res 2013;73(8 Suppl):Abstract nr 2116. doi:10.1158/1538-7445.AM2013-2116
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- 2013
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