32 results on '"Arieti, Fabiana"'
Search Results
2. Modelling antimicrobial resistance transmission to guide personalized antimicrobial stewardship interventions and infection control policies in healthcare setting: a pilot study
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Durazzi, Francesco, Pezzani, Maria Diletta, Arieti, Fabiana, Simonetti, Omar, Canziani, Lorenzo Maria, Carrara, Elena, Barbato, Lorenzo, Onorati, Francesco, Remondini, Daniel, and Tacconelli, Evelina
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- 2023
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3. Frequency of bloodstream infections caused by six key antibiotic-resistant pathogens for prioritization of research and discovery of new therapies in Europe: a systematic review
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Pezzani, Maria Diletta, Arieti, Fabiana, Rajendran, Nithya Babu, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Hassoun-Kheir, Nasreen, Argante, Lorenzo, Schmidt, Johannes, Rodriguez-Bano, Jesus, Harbarth, Stephan, de Kraker, Marlieke, Gladstone, Beryl Primrose, and Tacconelli, Evelina
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- 2024
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4. Excess resource use and cost of drug-resistant infections for six key pathogens in Europe: a systematic review and Bayesian meta-analysis
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Lorenzo Argante, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Geurtsen, Jeroen, Guedes, Mariana, Mejia, Jorly, Palladino, Andrea, Pezzani, Maria Diletta, Piljic, Alen, Kingston, Rhys, Vella, Venanzio, Pouwels, Koen B., Schmidt, Johannes E., Abdelatif El-Abasiri, Radwa A., Reyna-Villasmil, Eduardo, Hassoun-Kheir, Nasreen, Harbarth, Stephan, Rodríguez-Baño, Jesús, Tacconelli, Evelina, Arieti, Fabiana, Gladstone, Beryl Primrose, de Kraker, Marlieke E.A., Naylor, Nichola R., and Robotham, Julie V.
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- 2024
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5. A systematic review on the excess health risk of antibiotic-resistant bloodstream infections for six key pathogens in Europe
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Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, El-Abasiri, Radwa A., Galia, Liliana, Geurtsen, Jeroen, Mejia, Jorly, Palladino, Andrea, Piljic, Alen, Rajendran, Nithya Babu, Reyna-Villasmil, Eduardo, Schmidt, Johannes E., Hassoun-Kheir, Nasreen, Guedes, Mariana, Ngo Nsoga, Marie-Therese, Argante, Lorenzo, Arieti, Fabiana, Gladstone, Beryl P., Kingston, Rhys, Naylor, Nichola R., Pezzani, Maria D., Pouwels, Koen B., Robotham, Julie V., Rodríguez-Baño, Jesús, Tacconelli, Evelina, Vella, Venanzio, Harbarth, Stephan, and de Kraker, Marlieke E.A.
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- 2024
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6. Expert consensus on antimicrobial resistance research priorities to focus development and implementation of antibacterial vaccines and monoclonal antibodies.
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Hassoun-Kheir, Nasreen, Guedes, Mariana, Arieti, Fabiana, Pezzani, Maria Diletta, Gladstone, Beryl Primrose, Robotham, Julie V., Pouwels, Koen B., Kingston, Rhys, Carmeli, Yehuda, Cassini, Alessandro, Cecchini, Michele, Drobniewski, Francis, Frost, Isabel, Geurtsen, Jeroen, Kronenberg, Andreas, Nu Htay, Mila Nu, Paul, Mical, Rocha-Pereira, Nuno, Rodríguez-Baño, Jesús, and Scudeller, Luigia
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- 2024
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7. Tracking Candidemia Trends and Antifungal Resistance Patterns across Europe: An In-Depth Analysis of Surveillance Systems and Surveillance Studies.
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Odoj, Karin, Garlasco, Jacopo, Pezzani, Maria Diletta, Magnabosco, Cristina, Ortiz, Diego, Manco, Federica, Galia, Liliana, Foster, Sarah K., Arieti, Fabiana, and Tacconelli, Evelina
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PUBLIC health surveillance ,CANDIDEMIA ,TREND analysis ,DRUG resistance ,INFORMATION sharing - Abstract
Background: The WHO fungal priority list classifies Candida species as critical and high-priority pathogens, and the WHO GLASS fungi initiative seeks to establish a standardised global framework for antifungal resistance monitoring. We aimed to review resistance rates and antifungal resistance patterns across European surveillance systems and studies in response to these recent calls for action. Methods: A systematic review of national and international surveillance systems and peer-reviewed surveillance studies available up to June 2024 was conducted. Descriptive and trend analyses were performed on surveillance data reporting resistance to different antifungals in Candida spp. Results: In total, 6 national surveillance systems and 28 studies from 13 countries provided candidemia resistance data, mostly about the C. albicans, C. glabrata and C. parapsilosis complex. Azole resistance was most frequently reported (6/6 surveillance systems and 27/28 studies) with the highest resistance rate, especially for C. glabrata, in Croatia (100%, 28/28 isolates) and Slovenia (85.7%, 82/96) and C. parapsilosis in Croatia (80.6%, 54/67) and Italy (72.6%, 106/146). Echinocandin and polyene resistance rates were nearly zero. The number of isolates included in the surveillance systems increased over the years, particularly for C. albicans (+40–60 isolates/year), C. glabrata, and C. parapsilosis (+15–30 isolates/year). No surveillance system or study reported resistance data for C. auris. Pooled data from national surveillance revealed a decreasing trend in azole resistance in C. albicans and C. glabrata. The increasing azole-resistance trend in C. parapsilosis disappeared after adjusting for between-country heterogeneity. Overall, echinocandin and polyene resistance trends appeared relatively stable. Conclusions: Awareness of antifungal resistance is growing, but further actions are needed to strengthen surveillance capacity and knowledge-sharing networks across Europe. [ABSTRACT FROM AUTHOR]
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- 2024
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8. A systematic review on the excess health risk of antibiotic-resistant bloodstream infections for six key pathogens in Europe
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Hassoun-Kheir, Nasreen, primary, Guedes, Mariana, additional, Ngo Nsoga, Marie-Therese, additional, Argante, Lorenzo, additional, Arieti, Fabiana, additional, Gladstone, Beryl P., additional, Kingston, Rhys, additional, Naylor, Nichola R., additional, Pezzani, Maria D., additional, Pouwels, Koen B., additional, Robotham, Julie V., additional, Rodríguez-Baño, Jesús, additional, Tacconelli, Evelina, additional, Vella, Venanzio, additional, Harbarth, Stephan, additional, de Kraker, Marlieke E.A., additional, Barana, Benedetta, additional, Cappelli, Eva, additional, De Rui, Maria Elena, additional, El-Abasiri, Radwa A., additional, Galia, Liliana, additional, Geurtsen, Jeroen, additional, Mejia, Jorly, additional, Palladino, Andrea, additional, Piljic, Alen, additional, Rajendran, Nithya Babu, additional, Reyna-Villasmil, Eduardo, additional, and Schmidt, Johannes E., additional
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- 2024
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9. A systematic review on the excess health risk of antibiotic-resistant bloodstream infections for six key pathogens in Europe
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Rodríguez-Baño, Jesús [0000-0001-6732-9001], Hassoun-Kheir, Nasreen, Guedes, Mariana, Ngo Nsoga, Marie Therese, Argante, Lorenzo, Arieti, Fabiana, Gladstone, Beryl Primrose, Kingston, Rhys, Naylor, Nichola R., Pezzani, Maria Diletta, Pouwels, Koen B., Robotham, Julie V., Rodríguez-Baño, Jesús, Tacconelli, Evelina, Vella, Venanzio, Harbarth, Stephan, Kraker, Marlieke de, PrIMAVeRa Work Package, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, El-Abasiri, Radwa A., Galia, Liliana, Geurtsen, Jeroen, Mejia, Jorly, Palladino, Andrea, Piljic, Alen, Rajendran, N. B., Reyna-Villasmil, Eduardo, Schmidt, Johannes, Rodríguez-Baño, Jesús [0000-0001-6732-9001], Hassoun-Kheir, Nasreen, Guedes, Mariana, Ngo Nsoga, Marie Therese, Argante, Lorenzo, Arieti, Fabiana, Gladstone, Beryl Primrose, Kingston, Rhys, Naylor, Nichola R., Pezzani, Maria Diletta, Pouwels, Koen B., Robotham, Julie V., Rodríguez-Baño, Jesús, Tacconelli, Evelina, Vella, Venanzio, Harbarth, Stephan, Kraker, Marlieke de, PrIMAVeRa Work Package, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, El-Abasiri, Radwa A., Galia, Liliana, Geurtsen, Jeroen, Mejia, Jorly, Palladino, Andrea, Piljic, Alen, Rajendran, N. B., Reyna-Villasmil, Eduardo, and Schmidt, Johannes
- Abstract
[Background] Antimicrobial resistance is a global threat, which requires novel intervention strategies, for which priority pathogens and settings need to be determined., [Objectives] We evaluated pathogen-specific excess health burden of drug-resistant bloodstream infections (BSIs) in Europe., [Methods] A systematic review and meta-analysis., [Data sources] MEDLINE, Embase, and grey literature for the period January 1990 to May 2022., [Study eligibility criteria] Studies that reported burden data for six key drug-resistant pathogens: carbapenem-resistant (CR) Pseudomonas aeruginosa and Acinetobacter baumannii, third-generation cephalosporin or CR Escherichia coli and Klebsiella pneumoniae, methicillin-resistant Staphylococcus aureus (MRSA) and vancomycin-resistant Enterococcus faecium. Excess health outcomes compared with drug-susceptible BSIs or uninfected patients. For MRSA and third-generation cephalosporin E. coli and K. pneumoniae BSIs, five or more European studies were identified. For all others, the search was extended to high-income countries., [Participants] Paediatric and adult patients diagnosed with drug-resistant BSI., [Interventions] Not applicable., [Assessment of risk of bias] An adapted version of the Joanna-Briggs Institute assessment tool., [Methods of data synthesis] Random-effect models were used to pool pathogen-specific burden estimates., [Results] We screened 7154 titles, 1078 full-texts and found 56 studies on BSIs. Most studies compared outcomes of drug-resistant to drug-susceptible BSIs (46/56, 82.1%), and reported mortality (55/56 studies, 98.6%). The pooled crude estimate for excess all-cause mortality of drug-resistant versus drug-susceptible BSIs ranged from OR 1.31 (95% CI 1.03–1.68) for CR P. aeruginosa to OR 3.44 (95% CI 1.62–7.32) for CR K. pneumoniae. Pooled crude estimates comparing mortality to uninfected patients were available for vancomycin-resistant Enterococcus and MRSA BSIs (OR of 11.19 [95% CI 6.92–18.09] and OR 6.18 [95% CI 2.10–18.17], respectively)., [Conclusions] Drug-resistant BSIs are associated with increased mortality, with the magnitude of the effect influenced by pathogen type and comparator. Future research should address crucial knowledge gaps in pathogen- and infection-specific burdens to guide development of novel interventions.
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- 2024
10. Frequency of bloodstream infections caused by six key antibiotic-resistant pathogens for prioritization of research and discovery of new therapies in Europe: a systematic review
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Rodríguez-Baño, Jesús [0000-0001-6732-9001], Pezzani, Maria Diletta, Arieti, Fabiana, Rajendran, N. B., Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Hassoun-Kheir, Nasreen, Argante, Lorenzo, Schmidt, Johannes, Rodríguez-Baño, Jesús, Harbarth, Stephan, Kraker, Marlieke de, Gladstone, Beryl Primrose, Tacconelli, Evelina, Rodríguez-Baño, Jesús [0000-0001-6732-9001], Pezzani, Maria Diletta, Arieti, Fabiana, Rajendran, N. B., Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Hassoun-Kheir, Nasreen, Argante, Lorenzo, Schmidt, Johannes, Rodríguez-Baño, Jesús, Harbarth, Stephan, Kraker, Marlieke de, Gladstone, Beryl Primrose, and Tacconelli, Evelina
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[Background] To prioritize healthcare investments, ranking of infections caused by antibiotic-resistant bacteria should be based on accurate incidence data., [Objectives] We performed a systematic review to estimate frequency measures of antimicrobial resistance for six key bacteria causing bloodstream infections (BSI) in European countries., [Data sources] We searched PubMed, Web of Science, Embase databases, and the ECRAID-Base Epidemiological-Network platform., [Study eligibility criteria] We included studies and surveillance systems assessing resistance-percentage, prevalence, or incidence-density of BSI because of carbapenem-resistant Pseudomonas aeruginosa, Acinetobacter baumannii, Klebsiella pneumoniae, and Escherichia coli, third-generation cephalosporins-resistant E. coli and K. pneumoniae, vancomycin-resistant Enterococcus faecium, and methicillin-resistant Staphylococcus aureus., [Methods] Reviewers independently assessed published data and evaluated study quality with the modified Joanna Briggs Institute critical appraisal tool. Pooled estimates were determined using random effects meta-analysis. Consistency of data was assessed using random effects meta-regression (Wald test, p > 0.05)., [Results] We identified 271 studies and 52 surveillance systems from 32 European countries. Forty-five studies (16%) reported on BSI, including 180 frequency measures most commonly as resistance-percentage (88, 48.9%). Among 309 frequency measures extracted from 24 (46%) surveillance systems, 278 (89%) were resistance-percentages. Frequency measures of methicillin-resistant S. aureus and vancomycin-resistant E. faecium BSI were more frequently reported from Southern Europe and Western Europe (80%), whereas carbapenem-resistant P. aeruginosa BSI from Northern Europe and Western Europe (88%). Highest resistance-percentages were detected for carbapenem-resistant A. baumannii (66% in Central Eastern Europe) and carbapenem-resistant K. pneumoniae (62.8% in Southern Europe). Pooled estimates showed lower resistance-percentages in community versus healthcare-associated infections and in children versus adults. Estimates from studies and surveillance systems were mostly consistent among European regions. The included data was of medium quality., [Discussion] Pathogen-specific frequency measures of antimicrobial resistance in BSI are insufficient to inform antibiotic stewardship and research and development strategies. Improving data collection and standardization of frequency measures is urgently needed.
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- 2024
11. Excess resource use and cost of drug-resistant infections for six key pathogens in Europe: a systematic review and Bayesian meta-analysis
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Innovative Medicines Initiative, European Commission, Rodríguez-Baño, Jesús [0000-0001-6732-9001], Kingston, Rhys, Vella, Venanzio, Pouwels, Koen B., Schmidt, Johannes, Abdelatif El-Abasiri, Radwa A., Reyna-Villasmil, Eduardo, Hassoun-Kheir, Nasreen, Harbarth, Stephan, Rodríguez-Baño, Jesús, Tacconelli, Evelina, Arieti, Fabiana, Gladstone, Beryl Primrose, Kraker, Marlieke de, Naylor, Nichola R., Robotham, Julie V., PrIMAVeRa Work Package, Argante, Lorenzo, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Geurtsen, Jeroen, Guedes, Mariana, Mejia, Jorly, Palladino, Andrea, Pezzani, Maria Diletta, Piljic, Alen, Innovative Medicines Initiative, European Commission, Rodríguez-Baño, Jesús [0000-0001-6732-9001], Kingston, Rhys, Vella, Venanzio, Pouwels, Koen B., Schmidt, Johannes, Abdelatif El-Abasiri, Radwa A., Reyna-Villasmil, Eduardo, Hassoun-Kheir, Nasreen, Harbarth, Stephan, Rodríguez-Baño, Jesús, Tacconelli, Evelina, Arieti, Fabiana, Gladstone, Beryl Primrose, Kraker, Marlieke de, Naylor, Nichola R., Robotham, Julie V., PrIMAVeRa Work Package, Argante, Lorenzo, Barana, Benedetta, Cappelli, Eva, De Rui, Maria Elena, Galia, Liliana, Geurtsen, Jeroen, Guedes, Mariana, Mejia, Jorly, Palladino, Andrea, Pezzani, Maria Diletta, and Piljic, Alen
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[Background] Quantifying the resource use and cost of antimicrobial resistance establishes the magnitude of the problem and drives action., [Objectives] Assessment of resource use and cost associated with infections with six key drug-resistant pathogens in Europe., [Methods] A systematic review and Bayesian meta-analysis., [Data sources] MEDLINE (Ovid), Embase (Ovid), Econlit databases, and grey literature for the period 1 January 1990, to 21 June 2022., [Study eligibility criteria] Resource use and cost outcomes (including excess length of stay, overall costs, and other excess in or outpatient costs) were compared between patients with defined antibiotic-resistant infections caused by carbapenem-resistant (CR) Pseudomonas aeruginosa and Acinetobacter baumannii, CR or third-generation cephalosporin Escherichia coli (3GCREC) and Klebsiella pneumoniae, methicillin-resistant Staphylococcus aureus, and vancomycin-resistant Enterococcus faecium, and patients with drug-susceptible or no infection., [Participants] All patients diagnosed with drug-resistant bloodstream infections (BSIs)., [Interventions] NA., [Assessment of risk of bias] An adapted version of the Joanna Briggs Institute assessment tool, incorporating case-control, cohort, and economic assessment frameworks., [Methods of data synthesis] Hierarchical Bayesian meta-analyses were used to assess pathogen-specific resource use estimates., [Results] Of 5969 screened publications, 37 were included in the review. Data were sparse and heterogeneous. Most studies estimated the attributable burden by, comparing resistant and susceptible pathogens (32/37). Four studies analysed the excess cost of hospitalization attributable to 3GCREC BSIs, ranging from -€ 2465.50 to € 6402.81. Eight studies presented adjusted excess length of hospital stay estimates for methicillin-resistant S. aureus and 3GCREC BSIs (4 each) allowing for Bayesian hierarchical analysis, estimating means of 1.26 (95% credible interval [CrI], −0.72 to 4.17) and 1.78 (95% CrI, −0.02 to 3.38) days, respectively., [Conclusions] Evidence on most cost and resource use outcomes and across most pathogen-resistance combinations was severely lacking. Given the importance of this evidence for rational policymaking, further research is urgently needed.
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- 2024
12. EPI-Net One Health reporting guideline for antimicrobial consumption and resistance surveillance data: a Delphi approach
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European Commission, European Federation of Pharmaceutical Industries and Associations, Babu Rajendran, Nithya, Arieti, Fabiana, Mena-Benítez, Carla Alejandra, Galia, Liliana, Tebon, Maela, Alvarez, Julio, Gladstone, Beryl Primrose, Collineau, Lucie, De Angelis, Giulia, Duro, Raquel, Gaze, William, Göpel, Siri, Kanj, Souha S., Käsbohrer, Annemarie, Limmathurotsakul, Direk, Lopez de Abechuco, Estibaliz, Mazzolini, Elena, Mutters, Nico T., Pezzani, Maria Diletta, Presterl, Elisabeth, Renk, Hanna, Rodríguez-Baño, Jesús, Săndulescu, Oana, Scali, Federico, Skov, Robert, Velavan, Thirumalaisamy P., Vuong, Cuong, Tacconelli, Evelina, European Commission, European Federation of Pharmaceutical Industries and Associations, Babu Rajendran, Nithya, Arieti, Fabiana, Mena-Benítez, Carla Alejandra, Galia, Liliana, Tebon, Maela, Alvarez, Julio, Gladstone, Beryl Primrose, Collineau, Lucie, De Angelis, Giulia, Duro, Raquel, Gaze, William, Göpel, Siri, Kanj, Souha S., Käsbohrer, Annemarie, Limmathurotsakul, Direk, Lopez de Abechuco, Estibaliz, Mazzolini, Elena, Mutters, Nico T., Pezzani, Maria Diletta, Presterl, Elisabeth, Renk, Hanna, Rodríguez-Baño, Jesús, Săndulescu, Oana, Scali, Federico, Skov, Robert, Velavan, Thirumalaisamy P., Vuong, Cuong, and Tacconelli, Evelina
- Abstract
Strategic and standardised approaches to analysis and reporting of surveillance data are essential to inform antimicrobial resistance (AMR) mitigation measures, including antibiotic policies. Targeted guidance on linking full-scale AMR and antimicrobial consumption (AMC)/antimicrobial residues (AR) surveillance data from the human, animal, and environmental sectors is currently needed. This paper describes the initiative whereby a multidisciplinary panel of experts (56 from 20 countries-52 high income, 4 upper middle or lower income), representing all three sectors, elaborated proposals for structuring and reporting full-scale AMR and AMC/AR surveillance data across the three sectors. An evidence-supported, modified Delphi approach was adopted to reach consensus among the experts for dissemination frequency, language, and overall structure of reporting; core elements and metrics for AMC/AR data; core elements and metrics for AMR data. The recommendations can support multisectoral national and regional plans on antimicrobials policy to reduce resistance rates applying a One Health approach.
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- 2023
13. EPI-Net One Health reporting guideline for antimicrobial consumption and resistance surveillance data: a Delphi approach
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Babu Rajendran, Nithya, primary, Arieti, Fabiana, additional, Mena-Benítez, Carla Alejandra, additional, Galia, Liliana, additional, Tebon, Maela, additional, Alvarez, Julio, additional, Gladstone, Beryl Primrose, additional, Collineau, Lucie, additional, De Angelis, Giulia, additional, Duro, Raquel, additional, Gaze, William, additional, Göpel, Siri, additional, Kanj, Souha S., additional, Käsbohrer, Annemarie, additional, Limmathurotsakul, Direk, additional, Lopez de Abechuco, Estibaliz, additional, Mazzolini, Elena, additional, Mutters, Nico T., additional, Pezzani, Maria Diletta, additional, Presterl, Elisabeth, additional, Renk, Hanna, additional, Rodríguez-Baño, Jesús, additional, Săndulescu, Oana, additional, Scali, Federico, additional, Skov, Robert, additional, Velavan, Thirumalaisamy P., additional, Vuong, Cuong, additional, Tacconelli, Evelina, additional, Adegnika, Ayola Akim, additional, Avery, Lisa, additional, Bonten, Marc, additional, Cassini, Alessandro, additional, Chauvin, Claire, additional, Compri, Monica, additional, Damborg, Peter, additional, De Greeff, Sabine, additional, Del Toro, Maria Dolores, additional, Filter, Matthias, additional, Franklin, Alison, additional, Gonzalez-Zorn, Bruno, additional, Grave, Kari, additional, Hocquet, Didier, additional, Hoelzle, Ludwig E., additional, Kalanxhi, Erta, additional, Laxminarayan, Ramanan, additional, Leibovici, Leonard, additional, Malhotra-Kumar, Surbhi, additional, Mendelson, Marc, additional, Paul, Mical, additional, Muñoz Madero, Cristina, additional, Murri, Rita, additional, Piddock, Laura J.V., additional, Ruesen, Carolien, additional, Sanguinetti, Maurizio, additional, Schilling, Thorben, additional, Schrijver, Remco, additional, Schwaber, Mitchell J., additional, Scudeller, Luigia, additional, Torumkuney, Didem, additional, Van Boeckel, Thomas, additional, Vanderhaeghen, Wannes, additional, Voss, Andreas, additional, and Wozniak, Teresa, additional
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- 2022
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14. White Paper: Bridging the gap between surveillance data and antimicrobial stewardship in the outpatient sector—practical guidance from the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks
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Arieti, Fabiana, Göpel, Siri, Sibani, Marcella, Carrara, Elena, Pezzani, Maria Diletta, Murri, Rita, Mutters, Nico T, Lòpez-Cerero, Lorena, Voss, Andreas, Cauda, Roberto, Tacconelli, Evelina, ARCH working group (Collaborators): Ayola Akim Adegnika, Fabiana, Arieti, Nithya Babu Rajendran, Julia, Bielicki, Steffen, Borrmann, Elena, Carrara, Roberto, Cauda, Compri, Monica, Giulia De Angelis, Raquel, Duro, Galia, Liliana, Petra, Gastmeier, Christian, Giske, Siri, Göpel, Herman, Goossens, Gunnar, Kahlmeter, Souha, S Kanj, Tomislav, Kostyanev, Leonard, Leibovici, Jean-Christophe, Lucet, Lorena, López-Cerero, Rodolphe, Mader, Mazzaferri, Fulvia, Elena, Mazzolini, Marc, Mendelson, Rita, Murri, Nico, T Mutters, Mical, Paul, Maria Diletta Pezzani, Elisabeth, Presterl, Hanna, R Enk, Oana, Sandulescu, Le Huu Song, Remco, Schrijver, Luigia, Scudeller, Mike, Sharland, Marcella, Sibani, Evelina, Tacconelli, Didem, Torumkuney, Thirumalaisamy, P Velavan, and Andreas, Voss
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0301 basic medicine ,Microbiology (medical) ,Knowledge management ,ESSENTIAL MEDICINES LIST, ANTIBIOTIC STEWARDSHIP, GENERAL-PRACTICE, CARE, RESISTANCE, PRESCRIPTIONS, PRESCRIBERS, PROVISION, INVENTORY, FEEDBACK ,Computer science ,030106 microbiology ,Delphi method ,INVENTORY ,Settore MED/17 - MALATTIE INFETTIVE ,03 medical and health sciences ,PRESCRIPTIONS ,Antimicrobial Stewardship ,0302 clinical medicine ,White paper ,GENERAL-PRACTICE ,Outpatients ,Antimicrobial stewardship ,AcademicSubjects/MED00740 ,Humans ,Pharmacology (medical) ,030212 general & internal medicine ,PRESCRIBERS ,Pharmacology ,Team composition ,Government ,ESSENTIAL MEDICINES LIST ,PROVISION ,FEEDBACK ,business.industry ,CARE ,ANTIBIOTIC STEWARDSHIP ,Checklist ,Hospitals ,Anti-Bacterial Agents ,Long-term care ,Infectious Diseases ,AcademicSubjects/MED00290 ,Supplement Papers ,Accountability ,Magnets ,Antimicrobial ,business ,AcademicSubjects/MED00230 ,RESISTANCE - Abstract
Background The outpatient setting is a key scenario for the implementation of antimicrobial stewardship (AMS) activities, considering that overconsumption of antibiotics occurs mainly outside hospitals. This publication is the result of a joint initiative by the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks, which is aimed at formulating a set of target actions for linking surveillance data with AMS activities in the outpatient setting. Methods A scoping review of the literature was carried out in three research areas: AMS leadership and accountability; antimicrobial usage and AMS; antimicrobial resistance and AMS. Consensus on the actions was reached through a RAND-modified Delphi process involving over 40 experts in infectious diseases, clinical microbiology, AMS, veterinary medicine or public health, from 18 low-, middle- and high-income countries. Results Evidence was retrieved from 38 documents, and an initial 25 target actions were proposed, differentiating between essential or desirable targets according to clinical relevance, feasibility and applicability to settings and resources. In the first consultation round, preliminary agreement was reached for all targets. Further to a second review, 6 statements were re-considered and 3 were deleted, leading to a final list of 22 target actions in the form of a practical checklist. Conclusions This White Paper is a pragmatic and flexible tool to guide the development of calibrated surveillance-based AMS interventions specific to the outpatient setting, which is characterized by substantial inter- and intra-country variability in the organization of healthcare structures, maintaining a global perspective and taking into account the feasibility of the target actions in low-resource settings.
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- 2020
15. EPI-Net One Health reporting guideline for antimicrobial consumption and resistance surveillance data: a Delphi approach
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Universidad de Sevilla. Departamento de Medicina, Universidad de Sevilla. Instituto de Biomedicina de Sevilla (IBIS), Babu Rajendran, Nithya, Arieti, Fabiana, Mena-Benítez, Carla Alejandra, Galia, Liliana, Tebon, Maela, Álvarez, Julio, Rodríguez-Baño, Jesús, Tacconelli, Evelina, Universidad de Sevilla. Departamento de Medicina, Universidad de Sevilla. Instituto de Biomedicina de Sevilla (IBIS), Babu Rajendran, Nithya, Arieti, Fabiana, Mena-Benítez, Carla Alejandra, Galia, Liliana, Tebon, Maela, Álvarez, Julio, Rodríguez-Baño, Jesús, and Tacconelli, Evelina
- Abstract
Strategic and standardised approaches to analysis and reporting of surveillance data are essential to inform antimicrobial resistance (AMR) mitigation measures, including antibiotic policies. Targeted guidance on linking fullscale AMR and antimicrobial consumption (AMC)/antimicrobial residues (AR) surveillance data from the human, animal, and environmental sectors is currently needed. This paper describes the initiative whereby a multidisciplinary panel of experts (56 from 20 countries—52 high income, 4 upper middle or lower income), representing all three sectors, elaborated proposals for structuring and reporting full-scale AMR and AMC/AR surveillance data across the three sectors. An evidence-supported, modified Delphi approach was adopted to reach consensus among the experts for dissemination frequency, language, and overall structure of reporting; core elements and metrics for AMC/AR data; core elements and metrics for AMR data. The recommendations can support multisectoral national and regional plans on antimicrobials policy to reduce resistance rates applying a One Health approach.
- Published
- 2022
16. White Paper: Bridging the gap between surveillance data and antimicrobial stewardship in the animal sector-practical guidance from the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks
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Compri, Monica, Mader, Rodolphe, Mazzolini, Elena, de Angelis, Giulia, Mutters, Nico T, Babu Rajendran, Nithya, Galia, Liliana, Tacconelli, Evelina, Schrijver, Remco, Adegnika, Ayola Akim, Arieti, Fabiana, Rajendran, Nithya Babu, Bielicki, Julia, Borrmann, Steffen, Carrara, Elena, Cauda, Roberto, De Angelis, Giulia, Filippitzi, Maria-Eleni, Frost, Isabel, Giske, Christian, Göpel, Siri, Guardabassi, Luca, Heuvelink, Annet, Kahlmeter, Gunnar, Kanj, Souha S, Kostyanev, Tomislav, Leibovici, Leonard, Lucet, Jean-Christophe, López-Cerero, Lorena, Mazzaferri, Fulvia, Mendelson, Marc, Murri, Rita, Paul, Mical, Pezzani, Maria Diletta, Presterl, Elisabeth, Renk, Hanna, Song, Le Huu, Sanguinetti, Maurizio, Scudeller, Luigia, Sharland, Mike, Sibani, Marcella, Torumkuney, Didem, Velavan, Thirumalaisamy P, and Voss, Andreas
- Subjects
Pharmacology ,Microbiology (medical) ,0303 health sciences ,Infection Control ,030306 microbiology ,040301 veterinary sciences ,ANTIBIOTIC-RESISTANCE ,04 agricultural and veterinary sciences ,Anti-Bacterial Agents ,0403 veterinary science ,03 medical and health sciences ,Antimicrobial Stewardship ,Infectious Diseases ,AcademicSubjects/MED00290 ,Anti-Infective Agents ,ESCHERICHIA-COLI ,Supplement Papers ,Magnets ,HEALTHMETRICS ,Animals ,AcademicSubjects/MED00740 ,Pharmacology (medical) ,ANTIBIOTIC-RESISTANCE,ESCHERICHIA-COLI,HEALTHMETRICS ,AcademicSubjects/MED00230 - Abstract
BackgroundThe JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks have joined efforts to formulate a set of target actions to link the surveillance of antimicrobial usage (AMU) and antimicrobial resistance (AMR) with antimicrobial stewardship (AMS) activities in four different settings. This White Paper focuses on the veterinary setting and embraces the One Health approach.MethodsA review of the literature was carried out addressing research questions in three areas: AMS leadership and accountability; AMU surveillance and AMS; and AMR surveillance and AMS. Consensus on target actions was reached through a RAND-modified Delphi process involving over 40 experts in infectious diseases, clinical microbiology, AMS, veterinary medicine and public health, from 18 countries.Results/discussionForty-six target actions were developed and qualified as essential or desirable. Essential actions included the setup of AMS teams in all veterinary settings, building government-supported AMS programmes and following specific requirements on the production, collection and communication of AMU and AMR data. Activities of AMS teams should be tailored to the local situation and capacities, and be linked to local or national surveillance systems and infection control programmes. Several research priorities were also identified, such as the need to develop more clinical breakpoints in veterinary medicine.ConclusionsThis White Paper offers a practical tool to veterinary practitioners and policy makers to improve AMS in the One Health approach, thanks to surveillance data generated in the veterinary setting. This work may also be useful to medical doctors wishing to better understand the specificities of the veterinary setting and facilitate cross-sectoral collaborations.
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- 2020
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17. The crystal structure of the Split End protein SHARP adds a new layer of complexity to proteins containing RNA recognition motifs
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Arieti, Fabiana, Gabus, Caroline, Tambalo, Margherita, Huet, Tiphaine, Round, Adam, and Thore, Stéphane
- Published
- 2014
- Full Text
- View/download PDF
18. Linking antimicrobial resistance surveillance to antibiotic policy in healthcare settings: the COMBACTE-Magnet EPI-Net COACH project
- Author
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Pezzani, Maria Diletta, Mazzaferri, Fulvia, Compri, Monica, Galia, Liliana, Mutters, Nico T, Kahlmeter, Gunnar, Zaoutis, Theoklis E, Schwaber, Mitchell J, Rodríguez-Baño, Jesús, Harbarth, Stephan, Tacconelli, Evelina, COACH working group (Collaborators): Blanca Anaya, Arieti, Fabiana, Nithya Babu Rajendran, Zaira, R Palacios Baena, Jesús, Rodríguez-Baño, Silvio, Brusaferro, Carrara, Elena, Dario, Cattaneo, Esmita, Charani, Monica, Compri, Sergey, Eremin, Daniele Roberto Giacobbe, Aina, Gomila-Grange, Stephan, Harbarth, Ramanan, Laxminarayan, LO CASCIO, Giuliana, Fulvia, Mazzaferri, Elena, Mazzolini, Michael, Mccarthy, Rafael, Canton, Nico, T Mutters, Olaf, Neth, Abdelhak, Oualim, Maria Diletta Pezzani, Adelina, Prioteasa, Katia, Saris, Mitchell, J Schwaber, Remco, Schrijver, Astrazeneca, Lp, Evelina, Tacconelli, Cuong, Vuong, Martin, Wolkewitz, and Theoklis, E Zaoutis
- Subjects
0301 basic medicine ,Microbiology (medical) ,INFECTIOUS-DISEASES SOCIETY ,IMPACT ,030106 microbiology ,Psychological intervention ,MEDLINE ,CLINICAL-PRACTICE GUIDELINES VENTILATOR-ASSOCIATED PNEUMONIA ,Drug Resistance ,03 medical and health sciences ,0302 clinical medicine ,Antibiotic resistance ,Drug Resistance, Bacterial ,Antimicrobial stewardship ,Medicine ,AcademicSubjects/MED00740 ,Humans ,Pharmacology (medical) ,Delivery of Health Care ,Magnets ,Policy ,Anti-Bacterial Agents ,030212 general & internal medicine ,Good practice ,STAPHYLOCOCCUS-AUREUS ,Pharmacology ,Team composition ,business.industry ,PSEUDOMONAS-AERUGINOSA ,Bacterial ,CLINICAL-PRACTICE GUIDELINES VENTILATOR-ASSOCIATED PNEUMONIA, INFECTIOUS-DISEASES SOCIETY, PSEUDOMONAS-AERUGINOSA, ESCHERICHIA-COLI, STEWARDSHIP INTERVENTIONS, CUMULATIVE ANTIBIOGRAMS, STAPHYLOCOCCUS-AUREUS, HOSPITAL UNIT, IMPACT ,CUMULATIVE ANTIBIOGRAMS ,medicine.disease ,Checklist ,Infectious Diseases ,AcademicSubjects/MED00290 ,ESCHERICHIA-COLI ,Supplement Papers ,Healthcare settings ,Medical emergency ,HOSPITAL UNIT ,business ,AcademicSubjects/MED00230 ,STEWARDSHIP INTERVENTIONS - Abstract
COACH working group.-- The paper is based on the discussion during the annual meeting of the EPI-Net project in Verona in September 2018., [Objectives] To systematically summarize the evidence on how to collect, analyse and report antimicrobial resistance (AMR) surveillance data to inform antimicrobial stewardship (AMS) teams providing guidance on empirical antibiotic treatment in healthcare settings., [Methods] The research group identified 10 key questions about the link between AMR surveillance and AMS using a checklist of 9 elements for good practice in health research priority settings and a modified 3D combined approach matrix, and conducted a systematic review of published original studies and guidelines on the link between AMR surveillance and AMS., [Results] The questions identified focused on AMS team composition; minimum infrastructure requirements for AMR surveillance; organisms, samples and susceptibility patterns to report; data stratification strategies; reporting frequency; resistance thresholds to drive empirical therapy; surveillance in high-risk hospital units, long-term care, outpatient and veterinary settings; and surveillance data from other countries. Twenty guidelines and seven original studies on the implementation of AMR surveillance as part of an AMS programme were included in the literature review., [Conclusions] The evidence summarized in this review provides a useful basis for a more integrated process of developing procedures to report AMR surveillance data to drive AMS interventions. These procedures should be extended to settings outside the acute-care institutions, such as long-term care, outpatient and veterinary. Without proper AMR surveillance, implementation of AMS policies cannot contribute effectively to the fight against MDR pathogens and may even worsen the burden of adverse events from such interventions.
- Published
- 2020
19. White Paper: Bridging the gap between surveillance data and antimicrobial stewardship in long-term care facilities-practical guidance from the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks
- Author
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Sibani, Marcella, Mazzaferri, Fulvia, Carrara, Elena, Pezzani, Maria Diletta, Arieti, Fabiana, Göpel, Siri, Paul, Mical, Tacconelli, Evelina, Mutters, Nico T, Voss, Andreas, and ARCH working group
- Subjects
0301 basic medicine ,Microbiology (medical) ,STRATEGIES ,030106 microbiology ,ANTIBIOTIC STEWARDSHIP, NURSING-HOMES, OUTCOMES, OPPORTUNITIES, INFECTIONS, PREVALENCE, STRATEGIES, COST ,NURSING-HOMES ,03 medical and health sciences ,Antimicrobial Stewardship ,0302 clinical medicine ,All institutes and research themes of the Radboud University Medical Center ,Anti-Infective Agents ,Humans ,AcademicSubjects/MED00740 ,Pharmacology (medical) ,030212 general & internal medicine ,Pharmacology ,OUTCOMES ,COST ,Long-Term Care ,ANTIBIOTIC STEWARDSHIP ,Anti-Bacterial Agents ,PREVALENCE ,OPPORTUNITIES ,Infectious Diseases ,AcademicSubjects/MED00290 ,lnfectious Diseases and Global Health Radboud Institute for Health Sciences [Radboudumc 4] ,INFECTIONS ,Supplement Papers ,Magnets ,AcademicSubjects/MED00230 - Abstract
BackgroundIn long-term care facilities (LTCFs) residents often receive inappropriate antibiotic treatment and infection prevention and control practices are frequently inadequate, thus favouring acquisition of MDR organisms. There is increasing evidence in the literature describing antimicrobial stewardship (AMS) activities in LTCFs, but practical guidance on how surveillance data should be linked with AMS activities in this setting is lacking. To bridge this gap, the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks joined their efforts to provide practical guidance for linking surveillance data with AMS activities.Materials and methodsConsidering the three main topics [AMS leadership and accountability, antimicrobial usage (AMU) and AMS, and antimicrobial resistance (AMR) and AMS], a literature review was performed and a list of target actions was developed. Consensus on target actions was reached through a RAND-modified Delphi process involving 40 experts from 18 countries and different professional backgrounds adopting a One Health approach.ResultsFrom the 25 documents identified, 25 target actions were retrieved and proposed for expert evaluation. The consensus process produced a practical checklist including 23 target actions, differentiating between essential and desirable targets according to clinical relevance and feasibility. Flexible proposals for AMS team composition and leadership were provided, with a strong emphasis on the need for well-defined and adequately supported roles and responsibilities. Specific antimicrobial classes, AMU metrics, pathogens and resistance patterns to be monitored are addressed. Effective reporting strategies are described.ConclusionsThe proposed checklist represents a practical tool to support local AMS teams across a wide range of care delivery organization and availability of resources.
- Published
- 2020
20. The antimicrobial resistance travel tool, an interactive evidence-based educational tool to limit antimicrobial resistance spread.
- Author
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Arieti, Fabiana, Savoldi, Alessia, Rejendran, Nithya Babu, Sibani, Marcella, Tebon, Maela, Pezzani, Maria Diletta, Gorska, Anna, Wozniak, Teresa M, and Tacconelli, Evelina
- Subjects
- *
ANTIBIOTICS , *TRAVEL , *ACE inhibitors , *RESEARCH funding , *DRUG resistance in microorganisms , *ANGIOTENSIN receptors , *PHARMACODYNAMICS - Abstract
Background: International travel has been recognized as a risk factor contributing to the spread of antimicrobial resistance (AMR). However, tools focused on AMR in the context of international travel and designed to guide decision-making are limited. We aimed at developing an evidence-based educational tool targeting both healthcare professionals (HCPs) and international travellers to help prevent the spread of AMR.Methods: A literature review on 12 antimicrobial-resistant bacteria (ARB) listed as critical and high tiers in the WHO Pathogen Priority List covering four key areas was carried out: AMR surveillance data; epidemiological studies reporting ARB prevalence data on carriage in returning travellers; guidance documents reporting indications on screening for ARB in returning travellers and recommendations for ARB prevention for the public. The evidence, catalogued at country-level, provided the content for a series of visualizations that allow assessment of the risk of AMR acquisition through travel.Results: Up to January 2021, the database includes data on: (i) AMR surveillance for 2.018.241 isolates from 86 countries; (ii) ARB prevalence of carriage from 11.679 international travellers and (iii) 15 guidance documents published by major public health agencies. The evidence allowed the development of a consultation scheme for the evaluation of risk factors, prevalence of carriage, proportion and recommendations for screening of AMR. For the public, pre-travel practical measures to minimize the risk of transmission were framed.Conclusions: This easy-to-use, annually updated, freely accessible AMR travel tool (https://epi-net.eu/travel-tool/overview/), is the first of its kind to be developed. For HCPs, it can provide a valuable resource for teaching and a repository that facilitates a stepwise assessment of the risk of AMR spread and strengthen implementation of optimized infection control measures. Similarly, for travellers, the tool has the potential to raise awareness of AMR and outlines preventive measures that reduce the risk of AMR acquisition and spread. [ABSTRACT FROM AUTHOR]- Published
- 2022
- Full Text
- View/download PDF
21. TReND in Africa: Toward a Truly Global (Neuro)science Community
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Baden, Tom, primary, Maina, Mahmoud Bukar, additional, Maia Chagas, Andre, additional, Mohammed, Yunusa Garba, additional, Auer, Thomas O., additional, Silbering, Ana, additional, von Tobel, Lukas, additional, Pertin, Marie, additional, Hartig, Renee, additional, Aleksic, Jelena, additional, Akinrinade, Ibukun, additional, Awadelkareem, Mosab A., additional, Koumoundourou, Artemis, additional, Jones, Aled, additional, Arieti, Fabiana, additional, Beale, Andrew, additional, Münch, Daniel, additional, Salek, Samyra Cury, additional, Yusuf, Sadiq, additional, and Prieto-Godino, Lucia L., additional
- Published
- 2020
- Full Text
- View/download PDF
22. The crystal structure of the Split End protein SHARP adds a new layer of complexity to proteins containing RNA recognition motifs
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Arieti, Fabiana, Gabus, Caroline, Tambalo, Margherita, Huet, Tiphaine, Round, Adam, Thore, Stéphane, Arieti, Fabiana, Gabus, Caroline, Tambalo, Margherita, Huet, Tiphaine, Round, Adam, and Thore, Stéphane
- Abstract
The Split Ends (SPEN) protein was originally discovered in Drosophila in the late 1990s. Since then, homologous proteins have been identified in eukaryotic species ranging from plants to humans. Every family member contains three predicted RNA recognition motifs (RRMs) in the N-terminal region of the protein. We have determined the crystal structure of the region of the human SPEN homolog that contains these RRMs—the SMRT/HDAC1 Associated Repressor Protein (SHARP), at 2.0 Å resolution. SHARP is a co-regulator of the nuclear receptors. We demonstrate that two of the three RRMs, namely RRM3 and RRM4, interact via a highly conserved interface. Furthermore, we show that the RRM3-RRM4 block is the main platform mediating the stable association with the H12-H13 substructure found in the steroid receptor RNA activator (SRA), a long, non-coding RNA previously shown to play a crucial role in nuclear receptor transcriptional regulation. We determine that SHARP association with SRA relies on both single- and double-stranded RNA sequences. The crystal structure of the SHARP-RRM fragment, together with the associated RNA-binding studies, extend the repertoire of nucleic acid binding properties of RRM domains suggesting a new hypothesis for a better understanding of SPEN protein functions
- Published
- 2017
23. Structural studies of RNA-binding domains
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Arieti, Fabiana and Thore, Stéphane
- Subjects
Crystallography ,ddc:570 ,RNA ,RNA-binding proteins - Abstract
RNA is a versatile molecule with a central role in many biological processes. RNAs are rarely found in isolation in the cells. Rather, they associate with RNA-binding proteins (RBPs) to form ribonucleoproteins (RNPs). Typically, RBPs are characterized by a modular domain organization, and most of them consist of only a few basic RNA-binding domains (RBDs) repeated in tandem. To carry out their multiplicity of functions, RBDs use a range of binding modes to interact with a variety of RNA structures. In the present thesis, functional and structural studies of two RBDs, was carried out: the double-strand RNA binding Domain (dsRBD) of the Adenosine Deaminase Acting on RNA (ADAR) enzymes, and the RNA Recognition Motifs (RRMs) contained in the SMRT/HDAC1 Associated Repressor Protein (SHARP). This study provides new insights into RNA-protein interactions, and it contributes and enriches the already extended repertoire of the RBDs recognition modes.
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- 2014
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24. New Insights into the Biological Role of Mammalian ADARs; the RNA Editing Proteins
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Mannion, Niamh, primary, Arieti, Fabiana, additional, Gallo, Angela, additional, Keegan, Liam, additional, and O'Connell, Mary, additional
- Published
- 2015
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25. Identification of Spen as a Crucial Factor for Xist Function through Forward Genetic Screening in Haploid Embryonic Stem Cells
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Monfort, Asun, primary, Di Minin, Giulio, additional, Postlmayr, Andreas, additional, Freimann, Remo, additional, Arieti, Fabiana, additional, Thore, Stéphane, additional, and Wutz, Anton, additional
- Published
- 2015
- Full Text
- View/download PDF
26. Structural views on the steroid receptor RNA activator
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Thore, Stéphane, primary, Arieti, Fabiana, additional, Huet, Tiphaine, additional, and Gabus-Darlix, Caroline, additional
- Published
- 2013
- Full Text
- View/download PDF
27. Identification of Spenas a Crucial Factor for XistFunction through Forward Genetic Screening in Haploid Embryonic Stem Cells
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Monfort, Asun, Di Minin, Giulio, Postlmayr, Andreas, Freimann, Remo, Arieti, Fabiana, Thore, Stéphane, and Wutz, Anton
- Abstract
In mammals, the noncoding XistRNA triggers transcriptional silencing of one of the two X chromosomes in female cells. Here, we report a genetic screen for silencing factors in X chromosome inactivation using haploid mouse embryonic stem cells (ESCs) that carry an engineered selectable reporter system. This system was able to identify several candidate factors that are genetically required for chromosomal repression by Xist. Among the list of candidates, we identify the RNA-binding protein Spen, the homolog of split ends. Independent validation through gene deletion in ESCs confirms that Spenis required for gene repression by Xist. However, Spenis not required for XistRNA localization and the recruitment of chromatin modifications, including Polycomb protein Ezh2. The identification of Spenopens avenues for further investigation into the gene-silencing pathway of Xistand shows the usefulness of haploid ESCs for genetic screening of epigenetic pathways.
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- 2015
- Full Text
- View/download PDF
28. The crystal structure of the Split End protein SHARP adds a new layer of complexity to proteins containing RNA recognition motifs
- Author
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Arieti, Fabiana, Gabus, Caroline, Tambalo, Margherita, Huet, Tiphaine, Round, Adam, Thore, Stéphane, Arieti, Fabiana, Gabus, Caroline, Tambalo, Margherita, Huet, Tiphaine, Round, Adam, and Thore, Stéphane
- Abstract
The Split Ends (SPEN) protein was originally discovered in Drosophila in the late 1990s. Since then, homologous proteins have been identified in eukaryotic species ranging from plants to humans. Every family member contains three predicted RNA recognition motifs (RRMs) in the N-terminal region of the protein. We have determined the crystal structure of the region of the human SPEN homolog that contains these RRMs—the SMRT/HDAC1 Associated Repressor Protein (SHARP), at 2.0 Å resolution. SHARP is a co-regulator of the nuclear receptors. We demonstrate that two of the three RRMs, namely RRM3 and RRM4, interact via a highly conserved interface. Furthermore, we show that the RRM3-RRM4 block is the main platform mediating the stable association with the H12-H13 substructure found in the steroid receptor RNA activator (SRA), a long, non-coding RNA previously shown to play a crucial role in nuclear receptor transcriptional regulation. We determine that SHARP association with SRA relies on both single- and double-stranded RNA sequences. The crystal structure of the SHARP-RRM fragment, together with the associated RNA-binding studies, extend the repertoire of nucleic acid binding properties of RRM domains suggesting a new hypothesis for a better understanding of SPEN protein functions
29. Excess resource use and cost of drug-resistant infections for six key pathogens in Europe: a systematic review and Bayesian meta-analysis.
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Kingston, Rhys, Vella, Venanzio, Pouwels, Koen B., Schmidt, Johannes E., Abdelatif El-Abasiri, Radwa A., Reyna-Villasmil, Eduardo, Hassoun-Kheir, Nasreen, Harbarth, Stephan, Rodríguez-Baño, Jesús, Tacconelli, Evelina, Arieti, Fabiana, Gladstone, Beryl Primrose, de Kraker, Marlieke E.A., Naylor, Nichola R., and Robotham, Julie V.
- Subjects
- *
METHICILLIN-resistant staphylococcus aureus , *ACINETOBACTER baumannii , *ENTEROCOCCUS faecium , *LENGTH of stay in hospitals , *GREY literature , *KLEBSIELLA pneumoniae , *DRUG resistance in microorganisms - Abstract
Quantifying the resource use and cost of antimicrobial resistance establishes the magnitude of the problem and drives action. Assessment of resource use and cost associated with infections with six key drug-resistant pathogens in Europe. A systematic review and Bayesian meta-analysis. MEDLINE (Ovid), Embase (Ovid), Econlit databases, and grey literature for the period 1 January 1990, to 21 June 2022. Resource use and cost outcomes (including excess length of stay, overall costs, and other excess in or outpatient costs) were compared between patients with defined antibiotic-resistant infections caused by carbapenem-resistant (CR) Pseudomonas aeruginosa and Acinetobacter baumannii , CR or third-generation cephalosporin Escherichia coli (3GCREC) and Klebsiella pneumoniae , methicillin-resistant Staphylococcus aureus , and vancomycin-resistant Enterococcus faecium , and patients with drug-susceptible or no infection. All patients diagnosed with drug-resistant bloodstream infections (BSIs). NA. An adapted version of the Joanna Briggs Institute assessment tool, incorporating case-control, cohort, and economic assessment frameworks. Hierarchical Bayesian meta-analyses were used to assess pathogen-specific resource use estimates. Of 5969 screened publications, 37 were included in the review. Data were sparse and heterogeneous. Most studies estimated the attributable burden by, comparing resistant and susceptible pathogens (32/37). Four studies analysed the excess cost of hospitalization attributable to 3GCREC BSIs, ranging from -€ 2465.50 to € 6402.81. Eight studies presented adjusted excess length of hospital stay estimates for methicillin-resistant S. aureus and 3GCREC BSIs (4 each) allowing for Bayesian hierarchical analysis, estimating means of 1.26 (95% credible interval [CrI], −0.72 to 4.17) and 1.78 (95% CrI, −0.02 to 3.38) days, respectively. Evidence on most cost and resource use outcomes and across most pathogen-resistance combinations was severely lacking. Given the importance of this evidence for rational policymaking, further research is urgently needed. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
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30. Expert consensus on antimicrobial resistance research priorities to focus development and implementation of antibacterial vaccines and monoclonal antibodies.
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Hassoun-Kheir N, Guedes M, Arieti F, Pezzani MD, Gladstone BP, Robotham JV, Pouwels KB, Kingston R, Carmeli Y, Cassini A, Cecchini M, Drobniewski F, Frost I, Geurtsen J, Kronenberg A, Htay MNN, Paul M, Rocha-Pereira N, Rodríguez-Baño J, Scudeller L, Stewardson AJ, Tacconelli E, Harbarth S, Vella V, and de Kraker ME
- Subjects
- Humans, Consensus, Drug Resistance, Bacterial, Delphi Technique, Research, Klebsiella pneumoniae immunology, Klebsiella pneumoniae drug effects, Europe, Bacterial Vaccines immunology, Bacterial Vaccines administration & dosage, Bacterial Vaccines therapeutic use, Antibodies, Monoclonal therapeutic use, Anti-Bacterial Agents therapeutic use
- Abstract
To reduce antimicrobial resistance (AMR), pathogen-specific AMR burden data are crucial to guide target selection for research and development of vaccines and monoclonal antibodies (mAbs). We identified knowledge gaps through previously conducted systematic reviews, which informed a Delphi expert consultation on future AMR research priorities and harmonisation strategies to support data-driven decision-making. Consensus (≥80% agreement) on importance and feasibility of research topics was achieved in two rounds, involving 24 of 39 and 19 of 24 invited experts, respectively. Priority pathogens and resistance profiles for future research were identified: third generation cephalosporin-resistant Klebsiella pneumoniae and Escherichia coli, for bloodstream and urinary tract infections, respectively, and meticillin-resistant Staphylococcus aureus for surgical-site infections. Prioritised high-risk populations included surgical, haemato-oncological and transplant patients. Mortality and resource use were prioritised as health-economic outcomes. The importance of age-stratified data and inclusion of a non-infected comparator group were highlighted. This agenda provides guidance for future research to fill knowledge gaps and support data-driven selection of target pathogens and populations for new preventive and treatment strategies, specifically vaccines and mAbs, to effectively address the AMR burden in Europe. These research priorities are also relevant to improve the evidence base for future AMR burden estimates.
- Published
- 2024
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31. EPI-Net One Health reporting guideline for antimicrobial consumption and resistance surveillance data: a Delphi approach.
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Babu Rajendran N, Arieti F, Mena-Benítez CA, Galia L, Tebon M, Alvarez J, Gladstone BP, Collineau L, De Angelis G, Duro R, Gaze W, Göpel S, Kanj SS, Käsbohrer A, Limmathurotsakul D, Lopez de Abechuco E, Mazzolini E, Mutters NT, Pezzani MD, Presterl E, Renk H, Rodríguez-Baño J, Săndulescu O, Scali F, Skov R, Velavan TP, Vuong C, and Tacconelli E
- Abstract
Strategic and standardised approaches to analysis and reporting of surveillance data are essential to inform antimicrobial resistance (AMR) mitigation measures, including antibiotic policies. Targeted guidance on linking full-scale AMR and antimicrobial consumption (AMC)/antimicrobial residues (AR) surveillance data from the human, animal, and environmental sectors is currently needed. This paper describes the initiative whereby a multidisciplinary panel of experts (56 from 20 countries-52 high income, 4 upper middle or lower income), representing all three sectors, elaborated proposals for structuring and reporting full-scale AMR and AMC/AR surveillance data across the three sectors. An evidence-supported, modified Delphi approach was adopted to reach consensus among the experts for dissemination frequency, language, and overall structure of reporting; core elements and metrics for AMC/AR data; core elements and metrics for AMR data. The recommendations can support multisectoral national and regional plans on antimicrobials policy to reduce resistance rates applying a One Health approach., Competing Interests: JA received grants/contracts from the Spanish Ministry of Agriculture, Food and Fisheries and EU Horizon 2020. Work of BPG was funded by the German Center for Infection research Clinical Research Unit (DZIF-CRU) at Tübingen. RD participated on Data Safety Monitoring Board of the ASTARTÉ study (for which no payments were received). WG received grants/contracts from the Horizon Europe grant (supported by UKRI) on AMR and pathogen evolution in costal environments and the UK Natural Environment Research Council grants on AMR Knowledge Exchange NE/V019279/1 and AMR evolution NE/W006251/1; WG received consultation fee for EU DG Sante AMR policy evaluation and recommendations. Work of AK was funded in the context of the project One Health EJP, which has received funding from the European Union's Horizon 2020 research and innovation programme under Grant Agreement No. 773830. EP received grants/contracts from the Austrian Ministry of Health for the National Surveillance Network of healthcare-associated infections (ANISS); EP received honorarium for participation as a chair of the Advisory board on AMR and MDRO Pfizer Austria (27.09.22). MB received grants/contracts from Janssen Vaccines, Novartis, CureVac, and Merck; MB received payment or honoraria for lectures, presentations, speakers bureaus, manuscript writing or educational events from Takeda (November 2019); MB participated on Data Safety Monitoring Board or Advisory Board of Sanofi, Spherecydes, Pfizer, Merck, Novartis, and Astra-Zeneca. MM received support for attending meetings and/or travel from the Global Antibiotic Research and Development Partnership (12.10.22–13.10.2022). LS received grants or contracts from the JPIAMR network grant 2020; LS received support for attending meetings and/or travel from ESCMID for the attendance of ECCMID 2022. DT is an employee of GlaxoSmithKline and holds shares in GlaxoSmithKline. TVB received consultation fees from Stonehaven Consulting; TVB received payment or honoraria for lectures, presentations, speakers bureaus, manuscript writing or educational events from Swedish Veterinary Council. Work of AV was supported by the COMBACTE-MAGNET consortium; AV serves as the ISAC president (International Society of Antimicrobial Chemotherapy) and board member of NVMM (Dutch Microbiology Society). All other authors declare no competing interests., (© 2022 The Authors.)
- Published
- 2022
- Full Text
- View/download PDF
32. White Paper: Bridging the gap between surveillance data and antimicrobial stewardship in long-term care facilities-practical guidance from the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks.
- Author
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Sibani M, Mazzaferri F, Carrara E, Pezzani MD, Arieti F, Göpel S, Paul M, Tacconelli E, Mutters NT, and Voss A
- Subjects
- Anti-Bacterial Agents therapeutic use, Humans, Long-Term Care, Magnets, Anti-Infective Agents therapeutic use, Antimicrobial Stewardship
- Abstract
Background: In long-term care facilities (LTCFs) residents often receive inappropriate antibiotic treatment and infection prevention and control practices are frequently inadequate, thus favouring acquisition of MDR organisms. There is increasing evidence in the literature describing antimicrobial stewardship (AMS) activities in LTCFs, but practical guidance on how surveillance data should be linked with AMS activities in this setting is lacking. To bridge this gap, the JPIAMR ARCH and COMBACTE-MAGNET EPI-Net networks joined their efforts to provide practical guidance for linking surveillance data with AMS activities., Materials and Methods: Considering the three main topics [AMS leadership and accountability, antimicrobial usage (AMU) and AMS, and antimicrobial resistance (AMR) and AMS], a literature review was performed and a list of target actions was developed. Consensus on target actions was reached through a RAND-modified Delphi process involving 40 experts from 18 countries and different professional backgrounds adopting a One Health approach., Results: From the 25 documents identified, 25 target actions were retrieved and proposed for expert evaluation. The consensus process produced a practical checklist including 23 target actions, differentiating between essential and desirable targets according to clinical relevance and feasibility. Flexible proposals for AMS team composition and leadership were provided, with a strong emphasis on the need for well-defined and adequately supported roles and responsibilities. Specific antimicrobial classes, AMU metrics, pathogens and resistance patterns to be monitored are addressed. Effective reporting strategies are described., Conclusions: The proposed checklist represents a practical tool to support local AMS teams across a wide range of care delivery organization and availability of resources., (© The Author(s) 2020. Published by Oxford University Press on behalf of the British Society for Antimicrobial Chemotherapy.)
- Published
- 2020
- Full Text
- View/download PDF
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