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Copyright of Revista Mexicana de Ingeniería Biomédica is the property of Sociedad Mexicana de Ingenieria Biomedica, A.C. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Copyright of Revista Mexicana de Ingeniería Biomédica is the property of Sociedad Mexicana de Ingenieria Biomedica, A.C. and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

In this work, we present a novel approach for multimodal elastic registration of medical images, where the key idea is to use local variability measures based on entropy, variance or a combination of these metrics. The proposed methodology relies on finding the displacements vector field between pixels of a source image and a target one, using the following three steps: first, an initial approximation of the vector field is achieved by using a parametric registration based on particle filtering between the images to align; second, the images previously registered are mapped to a common space where their intensities can be compared; and third, we obtain the optical flow between the images in this new space. To evaluate the proposed algorithm, a set of computed tomography and magnetic resonance images obtained in different views, were modified with synthetic deformation fields. The results obtained with the four proposed local variability measures show an average error of less than 1.4 mm, and in the case of the entropy less than 1 mm. In addition, the convergence of the algorithm is highlighted by the joint entropy. Therefore, the described methodology could be considered as a new alternative for multimodal elastic registration of medical images. [ABSTRACT FROM AUTHOR]

Spectral unmixing is the process of breaking down data from a sample into its basic components and their abundances. Previous work has been focused on blind unmixing of multi-spectral fluorescence lifetime imaging microscopy (m-FLIM) datasets under a linear mixture model and quadratic approximations. This method provides a fast linear decomposition and can work without a limitation in the maximum number of components or end-members. Hence this work presents an interactive software which implements our blind end-member and abundance extraction (BEAE) and quadratic blind linear unmixing (QBLU) algorithms in Matlab. The options and capabilities of our proposed software are described in detail. When the number of components is known, our software can estimate the constitutive end-members and their abundances. When no prior knowledge is available, the software can provide a completely blind solution to estimate the number of components, the end-members and their abundances. The characterization of three case studies validates the performance of the new software: ex-vivo human coronary arteries, human breast cancer cell samples, and in-vivo hamster oral mucosa. The software is freely available in a hosted webpage by one of the developing institutions, and allows the user a quick, easy-to-use and efficient tool for multi/hyper-spectral data decomposition., (Copyright © 2015 Elsevier Ireland Ltd. All rights reserved.)

Multi-Spectral Fluorescent Lifetime Imaging Microscopy (m-FLIM) is a technique that aims to perform noninvasive in situ clinical diagnosis of several diseases. It measures the endogenous fluorescence of molecules, recording their lifetime decay in different wavelength bands. This signal is a mixed response of multiple fluorescent components present in a tissue sample. The goal is to decompose the mixture and estimate the proportional contributions of its constituents. Estimation of such quantitative description will help to characterize the molecular constitution of a given sample. This paper presents a new method to estimate the abundances of multiple components present in a mixture measured using m-FLIM data. It provides a closed-form solution under the fully constrained linear unmixing model and assuming the number of components as well as their ideal lifetime decays are known. Its performance is tested using synthetic samples with three components, where performance can be measured accurately and the percentage error is around 6%. The algorithm was also validated performing unmixing of ex vivo data samples from atherosclerotic human tissue containing collagen, elastin and low-density lipoproteins. These experiments were validated against ground-truth maps, which only give a quantitative description, and the estimated accuracy was around 88%.

This paper presents the evaluation of the accuracy of an elastic registration algorithm, based on the particle filter and an optical flow process. The algorithm is applied in brain CT and MRI simulated image datasets, and MRI images from a real clinical radiotherapy case. To validate registration accuracy, standard indices for registration accuracy assessment were calculated: the dice similarity coefficient (DICE), the average symmetric distance (ASD) and the maximal distance between pixels (Dmax). The results showed that this registration process has good accuracy, both qualitatively and quantitatively, suggesting that this method may be considered as a good new option for radiotherapy applications like patient's follow up treatment.