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Background: Conventional wastewater treatment plants discharge significant amounts of antibiotic resistant bacteria and antibiotic resistance genes into natural water bodies contributing to the spread of antibiotic resistance. Some advanced wastewater treatment technologies have been shown to effectively decrease the number of bacteria. Nevertheless, there is still a lack of knowledge about the effectiveness of these treatments on antibiotic resistant bacteria and antibiotic resistant genes. To the best of our knowledge, no specific studies have considered how powdered activated carbon (PAC) treatments can act on antibiotic resistant bacteria, although it is essential to assess the impact of this wastewater treatment on the spread of antibiotic resistant bacteria. Methods: To address this gap, we evaluated the fate and the distribution of fluorescent-tagged antibiotic/ antimycotic resistant microorganisms in a laboratory-scale model simulating a process configuration involving powdered activated carbon as advanced wastewater treatment. Furthermore, we studied the possible increase of naturally existing antibiotic resistant bacteria during the treatment implementing PAC recycling. Results: The analysis of fluorescent-tagged microorganisms demonstrated the efficacy of the PAC adsorption treatment in reducing the load of both susceptible and resistant fluorescent microorganisms in the treated water, reaching a removal efficiency of 99.70%. Moreover, PAC recycling did not increase the resistance characteristics of cultivable bacteria neither in the sludge nor in the treated effluent. Conclusion: Results suggest that wastewater PAC treatment is a promising technology not only for the removal of micropollutants but also for its effect in decreasing antibiotic resistant bacteria release.

Aeromonas spp. and fecal coliforms, two abundant and cultivable bacterial populations that can be found in water ecosystems, might substantially contribute to the spread of antibiotic resistance. We investigated the presence and spread of transposons (elements that can move from one location to another in the genome), integrons (structures able to capture and incorporate gene cassettes) and resistance plasmids in strains isolated from polluted and unpolluted water. We recovered 231 Aeromonas and 250 fecal coliforms from water samplings with different degrees of pollution (hospital sewage, activated sludge of a wastewater treatment plant, river water before and after treatment and water from an alpine lake). Sixteen Aeromonas spp. and 22 fecal coliforms carried intI, coding for the site-specific integrase of class 1 integrons, while 22 Aeromonas spp. and 14 fecal coliforms carried tnpA, the transposase gene of the Tn3-family of replicative transposons. The majority of intI and tnpA-positive strains were phenotypically resistant to at least four antibiotics. Integrons and transposons were mainly located on mobilizable plasmids. Our results did not detect common mobile structures in the two populations and therefore relativize the role played by Aeromonas spp. as vectors of antimicrobial resistance determinants between water and commensal gut bacteria.

Two isolates, designated CadH11T and Cad448T, representing uncultured purple sulfur bacterial populations H and 448, respectively, in the chemocline of Lake Cadagno, a crenogenic meromictic lake in Switzerland, were obtained using enrichment and isolation conditions that resembled those used for cultured members of the genus Thiocystis. Phenotypic, genotypic and phylogenetic analyses of these isolates confirmed their assignment to the genus Thiocystis. However, 16S rRNA gene sequence similarities of 98.2 % between CadH11T and Cad448T, and similarities of 97.7 and 98.5 %, respectively, with their closest cultured relative Thiocystis gelatinosa DSM 215T, as well as differences in DNA G+C content and carbon source utilization suggested that the isolates belonged to two distinct species. DNA–DNA hybridization of CadH11T and Cad448T with T. gelatinosa DSM 215T showed relatedness values of 46.4 and 60.8 %, respectively; the relatedness value between CadH11T and Cad448T was 59.2 %. Based on this evidence, strains CadH11T and Cad448T represent two novel species within the genus Thiocystis, for which the names Thiocystis chemoclinalis sp. nov. and Thiocystis cadagnonensis sp. nov. are proposed, respectively. The type strains of T. chemoclinalis sp. nov. and T. cadagnonensis sp. nov. are CadH11T ( = JCM 15112T = KCTC 5954T) and Cad448T ( = JCM 15111T = KCTC 15001T), respectively.

Chikungunya (CHIK) is an emerging or reemerging arboviral infectious disease transmitted to humans by the Asian tiger mosquito, Aedes albopictus (Skuse), and the yellow fever mosquito, Ae. aegypti (L.), particularly in Africa, India, Southeast Asia, and other parts of Europe where numerous outbreaks and epidemics were documented during recent decades. This viral disease is a potential threat to human health worldwide; thus, a quantitative one-step, real-time RT-PCR protocol was developed and assessed as a suitable assay for minimum detection of chikungunya virus (CHIKV) E1 (genus Alphavirus, family Togaviridae) in human serum (7.51 fg/μl) by using the QuantiTect® Probe RT-PCR kit with appropriate synthetic primer (CHIK E1 F and CHIK E1 R) and dual-labeled CHIK E1 probe. Unfortunately, we did not detect any CHIKV from 9 species, namely Ae. albopictus, Aedes (=Ochlerotatus) cantans (Meigen), Ae. cinereus Meigen, Ae. geminus Peus, Ae. vexans (Meigen), Anopheles claviger Meigen, An. maculipennis Meigen s.l., ...

Genetic relationships among bacterial strains belonging to the genus Aeromonas were inferred from 16S rRNA, gyrB and rpoB gene sequences. Twenty-eight type or collection strains of the recognized species or subspecies and 33 Aeromonas strains isolated from human and animal specimens as well as from environmental samples were included in the study. As reported previously, the 16S rRNA gene sequence is highly conserved within the genus Aeromonas, having only limited resolution for this very tight group of species. Analysis of a 1.1 kb gyrB sequence confirmed that this gene has high resolving power, with maximal interspecies divergence of 15.2 %. Similar results were obtained by sequencing only 517 bp of the rpoB gene, which showed maximal interspecies divergence of 13 %. The topologies of the gyrB- and rpoB-derived trees were similar. The results confirm the close relationship of species within the genus Aeromonas and show that a phylogenetic approach including several genes is suitable for improving the complicated taxonomy of the genus.

Aims: To determine the fate of viable Bacillus thuringiensis var. israelensis (Bti) spores dispersed in the environment, using a universally applicable molecular detection methodology. Methods and Results: Soil samples were spread on growth medium, after a temperature selection of the spores. A PCR amplification of the cry4Aa and cry4Ba insecticidal genes was applied on the colonies. Ribotyping was performed subsequently. This combined molecular method proved to be very specific for Bti, which was easily differentiated from the other B. thuringiensis serovars. A site regularly treated with Vectobac-G® was chosen within the ‘Bolle di Magadino’ natural reserve, and monitored throughout 1 year for the detection of Bti spores. The results showed that the numbers were relatively high after insecticidal applications (1.4 × 105 CFU g−1), and decreased approx. 10-fold after 220 days. A successive treatment induced a new increase. Conclusions: The results show that yearly repeated use of Vectobac-G® does not seem to have a major ecological impact on the ‘Bolle di Magadino’ natural reserve. Bti spores followed a trend leading to their eventual disappearance from the ecosystem, despite the seasonal application of this biological insecticide for more than a decade. Significance and Impact of the Study: The molecular identification of Bti cells through the PCR analysis of the delta-endotoxins genes coupled to ribotyping, is an innovative method, that has enabled the identification of this organism into wetland environments.

The phenospecies Yersinia frederiksenii is known to comprise three genospecies, indistinguishable on the basis of phenotypic characteristics. In previous works, 13 strains, identified biochemically as Y. frederiksenii, were characterized using Multilocus enzyme electrophoresis and Ribotyping. In order to elucidate the phylogenetic position of these strains we performed their molecular typing by means of 16S rDNA and gyrB sequences analyses. Results demonstrated that gyrB is a better phylogenetic marker than 16S rDNA. The classification achieved by gyrB sequences analyses was in agreement with results obtained with more laborious methods. Moreover, a good phylogenetic identification could be reached also with partial gyrB sequences of only 350 bp.

Lake Cadagno, a crenogenic meromictic lake located in the catchment area of a dolomite vein rich in gypsum in the Piora Valley in the southern Alps of Switzerland, is characterized by a compact chemocline with high concentrations of sulfate, steep gradients of oxygen, sulfide and light and a turbidity maximum that correlates to large numbers of bacteria (up to 107 cells ml-1). The most abundant taxa in the chemocline are large- and small-celled purple sulfur bacteria, which account for up to 35% of all bacteria, and sulfate- reducing bacteria that represent up to 23% of all bacteria. Depending on the season, as much as 45% of all bacteria in the chemocline are associated in aggregates consisting of different populations of small-celled purple sulfur bacteria of the genus Lamprocystis (up to 35% of all bacteria) and sulfate-reducing bacteria of the family Desulfobulbaceae (up to 12% of all bacteria) that are almost completely represented by bacteria closely related to Desulfocapsa thiozymogenes. Their association in aggregates is restricted to small-celled purple sulfur bacteria of the genus Lamprocystis, but not obligate since non-associated cells of bacteria related to D. thiozymogenes are frequently found, especially under limited light conditions in winter and early summer. Aggregate formation and concomitant growth enhancement of isolates of both partners of this association suggests synergistic interactions that might resemble a sulfide-based source-sink relationship between the sulfate-reducing bacterium that is able to sustain growth by a disproportionation of inorganic sulfur compounds (sulfur, thiosulfate, sulfite), with the purple sulfur bacteria acting as a biotic scavenger. The availability of these isolates opens up the door for future studies considering other facets of potential interactions in aggregates since both types of organisms are metabolically highly versatile and interactions may not be limited to sulfur compounds only.

In the current study, a group of 17 "Aeromonas eucrenophila-like" isolates from clinical and environmental origins was subjected to a polyphasic taxonomic characterization including ribotyping, 16S rDNA sequencing, FAFLP fingerprinting, and biochemical testing. Genotypic, phylogenetic, and phenotypic results were consistent with the conclusion that this group of 17 isolates may represent a currently undescribed Aeromonas taxon most closely related to A. eucrenophila HG6. In addition, comparison of newly obtained 16S rDNA sequencing data with published sequences demonstrated a high phylogenetic heterogeneity among isolates currently classified in the species A. encheleia.

The secretory immunoglobulin A (sIgA) response at the intestinal mucosa is one of the primary defense mechanisms protecting against enteric infections and may therefore be used as an indicator of bacterial enteropathogenicity. In order to understand the role played by Aeromonas strains as gastrointestinal infectious agents, the sIgA response in fecal specimens obtained from patients with naturally acquired Aeromonas diarrhea was examined. Our results demonstrated a specific sIgA response which was directed against the exoproteins produced by Aeromonas strains. The specific Aeromonas sIgA reacted with extracellular products showing molecular masses similar to those of the Aeromonas hemolytic toxins such as aerolysin and AHH1. Some reactions were directed against other proteins that are known to be important factors in the pathogenicity of Aeromonas. The specific responses highlighted are in support of the view that one should consider at least certain biotypes of Aeromonas enteropathogenic.

Female cuttlefish harbour a dense bacterial community in their accessory nidamental glands (ANG), as is also the case for the myopsid squids. Molecular approaches have been applied to explore this symbiotic association in the sepiid species Sepia officinalis. In situ localisation by Bacteria-specific probes in tissue sections of the ANG revealed the presence of a dense bacterial population in the lumina of the organ tubules. The phylogenetic identification of bacterial strains was realised by 16S rRNA gene sequencing analysis. None of the sequences obtained matched perfectly with known sequences in the database. However their similarity percentages allowed us to relate them to various bacterial groups including the taxa Agrobacterium, Roseobacter, Sporichthya, Rhodobium–Xanthobacter and Clostridium. Some bacterial species are common to both sepioids and myopsid teuthoids, others are different.

Ribotyping was used to study the epidemiology of Aeromonas associated gastro-enteritis in young children. Ribotyping patterns of 29 Aeromonas strains (16 Aeromonas caviae, 8 Aeromonas hydrophila, 3 Aeromonas eucrenophila, 1 Aeromonas veronii, and 1 Aeromonas encheleia) isolated from primary stool cultures of sick children were compared using the GelCompare software with patterns of 104 strains (39 Aeromonas eucrenophila, 29 Aeromonas caviae, 11 Aeromonas encheleia, 10 Aeromonas hydrophila, 6 Aeromonas bestiarum, 3 Aeromonas veronii, 3 Aeromonas popoffii and 3 Aeromonas media) isolated from their household environment in order to investigate the route of transmission of these bacteria. Fifteen strains (approximately 47%) isolated from stool cultures of patients showed the same riboprofile as strains found in contacts or environment. In particular, three strains isolated from patients shared the same riboprofile with strains found in their domestic environment. The wide diffusion of potentially pathogenic Aeromonas strains in our household samples, and the high rate of asymptomatic carriers among family members, suggested that predisposing factors of the host could make children prone to an Aeromonas-related intestinal disease.

The genus Aeromonas has undergone a number of taxonomic and nomenclature revisions over the past 20 years, and new (sub)species and biogroups are continuously described. Standard identification methods such as biochemical characterization have deficiencies and do not allow clarification of the taxonomic position. This report describes the development of a matrix-assisted laser desorption/ionisation-time of flight mass spectrometry (MALDI-TOF MS) identification database for a rapid identification of clinical and environmental Aeromonas isolates.

The occurrence of Clostridium difficile in nine wastewater treatment plants in the Ticino Canton (southern Switzerland) was investigated. The samples were collected from raw sewage influents and from treated effluents. Forty-seven out of 55 characterized C. difficile strains belonged to 13 different reference PCR ribotypes (009, 010, 014, 015, 039, 052, 053, 066, 070, 078, 101, 106, and 117), whereas 8 strains did not match any of those available in our libraries. The most frequently isolated ribotype (40%) was 078, isolated from six wastewater treatment plants, whereas ribotype 066, a toxigenic emerging ribotype isolated from patients admitted to hospitals in Europe and Switzerland, was isolated from the outgoing effluent of one plant. The majority of the isolates (85%) were toxigenic. Forty-nine percent of them produced toxin A, toxin B, and the binary toxin (toxigenic profile A + B + CDT + ), whereas 51% showed the profile A + B + CDT − . Interestingly, eight ribotypes (010, 014, 015, 039, 066, 078, 101, and 106) were among the riboprofiles isolated from symptomatic patients admitted to the hospitals of the Ticino Canton in 2010. Despite the limitation of sampling, this study highlights that toxigenic ribotypes of C. difficile involved in human infections may occur in both incoming and outgoing biological wastewater treatment plants. Such a finding raises concern about the possible contamination of water bodies that receive wastewater treatment plant effluents and about the safe reuse of treated wastewater.

Allelic variations in the chromosomal genome of 120 isolates of motile Aeromonas (A. hydrophila, A. sobria and A. caviae) and eight reference strains with one Plesiomonas shigelloides were assessed by analysis of electrophoretically demonstrable polymorphism in 16 genes encoding metabolic enzymes. The strains were collected from humans (n = 59) and from the aquatic environment (n = 61) in canton Tessin, Switzerland. Clustering of the electrophoretic types (ET) from a matrix of pairwise genetic distances, based on the 16 enzyme loci, confirmed the genetic distinctness of the three species. Furthermore, A. hydrophila and A. sobria were divided in three and two groups respectively. For each species clinical strains were well differentiated from those collected in the environment.

Five Aeromonas strains, isolated from both clinical and environmental sources and characterized by a polyphasic approach, including phylogenetic analysis derived from gyrB, rpoD, and 16S rRNA gene sequencing, as well as DNA-DNA hybridization, extensive biochemical and antibiotic susceptibility tests, were recognized as members of an unknown, or undescribed, Aeromonas species. These "Aeromonas eucrenophila-like" strains were closely related to the species A. eucrenophila and Aeromonas encheleia, but they were negative for indole and acid from glycerol tests. Therefore, based on the results of the phylogenetic analyses and DNA-DNA pairing data of these strains, a novel species of the genus Aeromonas is described, for which the name Aeromonas tecta is proposed with isolate F518(T) (CECT7082(T), DSM17300(T), MDC91(T)) as the type strain.

OBJECTIVES: To search for plasmid-mediated qnr genes among waterborne environmental Aeromonas spp. recovered from Switzerland. METHODS: Isolates presenting MICs of nalidixic acid or ciprofloxacin > or = 1 mg/L were screened for qnr genes by a multiplex PCR approach followed by sequencing. Plasmids were transferred by transformation, and further analysis of the genetic structures surrounding the qnrS2 gene was carried out by PCR and sequencing. RESULTS: A qnrS2 gene was identified from a single Aeromonas allosaccharophila isolate (Lugano lake, Lugano), as part of a mobile insertion cassette located on a broad host range IncU-type plasmid. This plasmid co-harboured a class 1 integron containing the aac(6')-Ib-cr, bla(OXA-1), catB3 and arr-3 gene cassettes. CONCLUSIONS: These findings strengthen further the role of Aeromonas spp. as a reservoir of antimicrobial resistance determinants in the environment.

Aims: To evaluate the usefulness of partial recA sequences for the identification of Aeromonas strains at the genotype level. Methods and Results: A partial recA sequence was obtained from 21 type or reference strains and 33 Aeromonas isolates, collected in the South of Switzerland from human, animal and aquatic environments. The 272 bp long recA fragments showed a mean interspecies divergence of 7·8% and allowed the classification of strains at genotype level. However, some discrepancies could be observed with other gene sequence based analyses in the classification of some strains. Conclusions: The 272 bp long recA fragment is a good molecular marker to infer taxonomy of members of the genus Aeromonas, even if the primers we chose for the amplification did not allow its direct sequencing. Significance and Impact of the Study: In the genus Aeromonas, nucleotide sequences of some protein-encoding genes have already been evaluated as molecular markers to be used in taxonomical and epidemiological researches. This study suggests the usefulness of a recA fragment as a further sequence to investigate for these purposes.

Pseudomonas sp. OX1, an aromatic compound-degrading bacterium that was tentatively identified by conventional biochemical methods as P. stutzeri, has now been investigated at the molecular level to clarify its taxonomic position. Amplified ribosomal DNA restriction analysis and multiple enzyme restriction fragment length polymorphism (MERFLP) analysis suggested that Pseudomonas sp. OX1 could not be classified as P. stutzeri. Phylogenetic analyses based on 16S rRNA and gyrB genes further confirmed that this strain belongs to the Pseudomonas (sensu stricto) genus, but not to the stutzeri species. The data obtained demonstrated that Pseudomonas sp. OX1 belongs to intrageneric cluster II and is related to the P. fluorescens–P. syringae complex.

Comparative sequence analysis of almost complete 16S rRNA genes of members of the Desulfobacteriaceae retrieved from two gene clone libraries of uncultured bacteria of the chemocline of Lake Cadagno, Switzerland, resulted in the molecular identification of nine sequences, with a tight cluster of five sequences that represented at least three different populations of bacteria with homology values of 95% and 93% to their closest cultured relatives Desulfomonile tiedjei and Desulfomonile limimaris, respectively. In situ hybridization with probes DsmA455 targeting two subpopulations and DsmB455 targeting one subpopulation, detected bacteria with a peculiar morphology previously described as "morphotype R". The individual probes detected about the same number of cells in all samples and together added up to represent all cells of "morphotype R" suggesting that the basic ecophysiological requirements of the subpopulations might be similar. In the monimolimnion, "morphotype R" cells accounted for up to 29% of all Bacteria and entirely represented the Desulfobacteriaceae, the most prominent sulfate-reducing bacteria. In the sediment, "morphotype R" was similarly prominent in the upper cm only where it represented all Desulfobacteriaceae and up to 50% of all Bacteria. Numbers and importance within the Desulfobacteriaceae and Bacteria declined significantly with depth in sediments suggesting potential effects of changing environmental conditions on the fate of "morphotype R".

The effects of different sewage treatments on the viral contamination in rivers which receive water from treatment plants without a final sand filtration step were investigated. They were all heavily contaminated with bacteriophages and human enteric viruses (detected by single step reverse transcription amplification followed by a nested polymerase chain reaction). Bacteriophages, but not faecal indicator organisms, were correlated with viral contamination.

Comparative sequence analysis of a 16S rRNA gene clone library from the chemocline of the meromictic Lake Cadagno (Switzerland) retrieved two clusters of sequences resembling sulfate-reducing bacteria within the family Desulfovibrionaceae . In situ hybridization showed that, similar to sulfate-reducing bacteria of the family Desulfobacteriaceae , bacteria of one cluster with similarity values to the closest cultured relatives of between 92.6 and 93.1% resembled free cells or cells loosely attached to other cells or debris. Bacteria of the second cluster closely related to Desulfocapsa thiozymogenes DSM7269 with similarity values between 97.9 and 98.4% were generally associated with aggregates of different small-celled phototrophic sulfur bacteria, suggesting a potential interaction between the two groups of bacteria.

To identify a group of eight Aeromonas strains of our collection showing ribotyping patterns similar to those described for the species Aeromonas popoffii, 16S rRNA gene sequence analysis was performed. Results were in agreement with the DNA binding values, and allowed the identification of a 'signature region' differentiating the A. popoffii strains from all other members of the genus Aeromonas.

Comparative sequence analysis of a 16S rRNA gene clone library from the chemocline of the meromictic Lake Cadagno (Switzerland) revealed the presence of a diverse number of phototrophic sulfur bacteria. Sequences resembled those of rRNA of type strains Chromatium okenii DSM169 and Amoebobacter purpureus DSM4197, as well as those of four bacteria forming a tight cluster with A. purpureus DSM4197 and Lamprocystis roseopersicina DSM229. In situ hybridization with fluorescent (Cy3 labeled) oligonucleotide probes indicated that all large-celled phototrophic sulfur bacteria in the chemocline of Lake Cadagno were represented by C. okenii DSM169, while small-celled phototrophic sulfur bacteria consisted of four major populations with different distribution profiles in the chemocline indicating different ecophysiological adaptations.

Aeromonas spp. are environmental reservoirs of resistance determinants to different classes of antibiotic molecules (1, 3, 7). Intrinsic resistance to β-lactams among this genus may arise from the expression of chromosomal β-lactamases and/or efflux pumps (5). Acquired β-lactamases conferring resistance to narrow-spectrum β-lactams, such as OXA-type enzymes and the penicillinases TEM-1 and SHV-1, have been identified in that genus as well as in a single report of the extended-spectrum β-lactamase (ESBL) TEM-24 (2, 4). The aim of this study was to evaluate the prevalence of ESBLs among Aeromonas sp. strains recovered from several rivers, lakes, and activated sludges from the southern part of the Swiss Alps. Water samples were collected between 2002 and 2005 from the rivers Ticino and Vedeggio, from the lakes Cadagno and Lugano, and from activated sludges, all located in the Tessin county of Switzerland. The water samples were plated and growing bacteria identified by conventional biochemical methods (API-NE system; bioMerieux, Marcy-l'Etoile, France). All of the 50 Aeromonas sp. strains recovered were tested for ESBL detection by a synergy test using disks of ticarcillin-clavulanic acid, ceftazidime, cefotaxime, and aztreonam. The susceptibility testing of isolates was performed using Etest strips (AB Biodisk, Solna, Sweden). A single isolate, A72, recovered from an activated sludge located in Bioggio, displayed an ESBL phenotype. This isolate was resistant to most β-lactams, except cephamycins and carbapenems (Table ​(Table1).1). PCR amplifications performed as described previously (9), using primers specific for ESBL-encoding genes, followed by sequencing identified the blaPER-1 gene. Genotyping of isolate A72, according to the results of gyrB sequencing (10), identified Aeromonas media, a waterborne species known to cause diarrhea in humans (6). TABLE 1. MICs of antimicrobial agents for Aeromonas media A72, E. coli J53 harboring natural plasmid p72, and E. coli reference strain J53 A 70-kb plasmid (pAM) harboring the blaPER-1 gene was transferred by conjugation into the Escherichia coli J53 recipient strain, using a selection made of ceftazidime (10 μg/ml) and sodium azide (100 μg/ml). Transconjugant E. coli J53(pAM) showed an antimicrobial susceptibility pattern mirroring that of A. media A72 (Table ​(Table11). PCR mapping performed as described previously (9) identified the blaPER-1 gene as part of a Tn1213 composite transposon, as previously found (9). In addition, this Tn1213 structure was bracketed by the aphA6 and strA genes (encoding resistance to aminoglycosides) of transposon Tn5393d, as already observed in an Alcaligenes faecalis clinical isolate producing PER-1 recovered from Italy. In that latter isolate, the Tn5393d transposon was inserted into a Tn501 backbone carrying a mercury resistance transposon (8) that was not identified in A. media A72 by PCR mapping. Our study constitutes the first identification of an ESBL-producing environmental Aeromonas sp. strain. The occurrence of blaPER-1 on a conjugative and broad-host-range plasmid, inside a genetic context similar to that described for an A. faecalis clinical isolate recovered in a neighboring country, may indicate that Aeromonas spp. may act as vehicles for spreading such an antibiotic resistance determinant. These findings also strengthen the role of Aeromonas spp. as reservoirs or vectors of antimicrobial resistance determinants of clinical relevance, as recently exemplified by the identification of the plasmid-mediated quinolone resistance qnrS2 gene in Aeromonas punctata and A. media from the Seine River, Paris, France (1).

A 19-year-old man developed an acute tracheobronchitis shortly after having been rescued from a near-drowning in a river where previous investigations had demonstrated the presence of 500 c.f.u. ml−1 of Aeromonas sp. in the water. An isolate of Aeromonas veronii biovar sobria was identified as the causative agent of the tracheobronchitis. The causality was supported by the massive growth of A. veronii in bronchial secretion, the presence of a type III secretion system in the bacterial isolate, and the strong haemolytic activity of the strain on blood agar.

Publisher Summary The way in which the maximum bacterial concentrations are connected to the trophogenous zones is determined by the presence of bacteria on the water column of a meromictic lake with a permanent stratification. In the study described in the chapter, an abundance of heterotrophic bacteria at the level of the supplementary primary production is observed due to bacterial photosynthesis. In the chemocline, the metabolites released from the trophogenous bacterial zone ( Chromatium okenii ) at a depth of 12 m and the sedimenting biomass allowed a proliferation of heterotrophic bacteria. The original supply of oxygen in this layer adjacent to the anoxic zone allowed a marked bacterial catabolism to take place, which was demonstrated by the saprophyte counts, by the increased turbidity, and, as a consequence of the bacterial metabolism, by the subsequent disappearance of the oxygen. In the investigation described in the chapter regarding the second lake ecosystem, it was possible to determine the vertical distribution of allochthonous bacteria of fecal origin carried into the lake by a contaminated affluent. These germs were distributed in the water column following the flow of a passive transport due to the stratification of the water of the affluent, which reaches the zone of the lake where the water is of equal density.

This research was carried out with the aim to explore the heterotrophic microbial population of two sediments in different oxic conditions of the Lake of Lugano (Lago di Lugano). The values of the viable bacterial counts found in our sediment samples were typical for an eutrophic lake. The increase in the proportion of anaerobic to aerobic bacteria at 30 °C observed in the sediment samples of Agno may reflect the depletion of oxygen concentrations in the water column. The genera Aeromonas, Pseudomonas, Bacillus and Clostridium, as well as strains belonging to the Coryneform-group, represented the major taxonomic groups of heterotrophic bacterial communities in the water-sediment interface.

The spreading of bacteria of the genusAeromonas in intensive fish rearing tanks was analyzed during one year. Lysotyping has established epidemiologic correlations between the strains ofAeromonas isolated from the aquatic environment and those of clinical (human) origin.