70 results on '"Anna Taubenberger"'
Search Results
2. Apico-basal cell compression regulates Lamin A/C levels in epithelial tissues
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K. Venkatesan Iyer, Anna Taubenberger, Salma Ahmed Zeidan, Natalie A. Dye, Suzanne Eaton, and Frank Jülicher
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Science - Abstract
The nuclear lamina bridges mechanical forces from the cytoskeleton to the nucleus, and while Lamin A/C is known to be crucial for this process, its regulation remains unclear. Here the authors show that levels of Lamin A/C scale with apico-basal compression of cells independently of tissue stiffness using Drosophila epithelial tissues and mammalian cells.
- Published
- 2021
- Full Text
- View/download PDF
3. Correlative all-optical quantification of mass density and mechanics of subcellular compartments with fluorescence specificity
- Author
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Raimund Schlüßler, Kyoohyun Kim, Martin Nötzel, Anna Taubenberger, Shada Abuhattum, Timon Beck, Paul Müller, Shovamaye Maharana, Gheorghe Cojoc, Salvatore Girardo, Andreas Hermann, Simon Alberti, and Jochen Guck
- Subjects
Brillouin microscopy ,optical diffraction tomography ,phase transition ,HeLa cells ,mechanical properties ,density measurement ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Quantitative measurements of physical parameters become increasingly important for understanding biological processes. Brillouin microscopy (BM) has recently emerged as one technique providing the 3D distribution of viscoelastic properties inside biological samples − so far relying on the implicit assumption that refractive index (RI) and density can be neglected. Here, we present a novel method (FOB microscopy) combining BM with optical diffraction tomography and epifluorescence imaging for explicitly measuring the Brillouin shift, RI, and absolute density with specificity to fluorescently labeled structures. We show that neglecting the RI and density might lead to erroneous conclusions. Investigating the nucleoplasm of wild-type HeLa cells, we find that it has lower density but higher longitudinal modulus than the cytoplasm. Thus, the longitudinal modulus is not merely sensitive to the water content of the sample − a postulate vividly discussed in the field. We demonstrate the further utility of FOB on various biological systems including adipocytes and intracellular membraneless compartments. FOB microscopy can provide unexpected scientific discoveries and shed quantitative light on processes such as phase separation and transition inside living cells.
- Published
- 2022
- Full Text
- View/download PDF
4. EMT‐Induced Cell‐Mechanical Changes Enhance Mitotic Rounding Strength
- Author
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Kamran Hosseini, Anna Taubenberger, Carsten Werner, and Elisabeth Fischer‐Friedrich
- Subjects
Science - Abstract
Abstract To undergo mitosis successfully, most animal cells need to acquire a round shape to provide space for the mitotic spindle. This mitotic rounding relies on mechanical deformation of surrounding tissue and is driven by forces emanating from actomyosin contractility. Cancer cells are able to maintain successful mitosis in mechanically challenging environments such as the increasingly crowded environment of a growing tumor, thus, suggesting an enhanced ability of mitotic rounding in cancer. Here, it is shown that the epithelial–mesenchymal transition (EMT), a hallmark of cancer progression and metastasis, gives rise to cell‐mechanical changes in breast epithelial cells. These changes are opposite in interphase and mitosis and correspond to an enhanced mitotic rounding strength. Furthermore, it is shown that cell‐mechanical changes correlate with a strong EMT‐induced change in the activity of Rho GTPases RhoA and Rac1. Accordingly, it is found that Rac1 inhibition rescues the EMT‐induced cortex‐mechanical phenotype. The findings hint at a new role of EMT in successful mitotic rounding and division in mechanically confined environments such as a growing tumor.
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- 2020
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5. A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy
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Matthias Christoph Munder, Daniel Midtvedt, Titus Franzmann, Elisabeth Nüske, Oliver Otto, Maik Herbig, Elke Ulbricht, Paul Müller, Anna Taubenberger, Shovamayee Maharana, Liliana Malinovska, Doris Richter, Jochen Guck, Vasily Zaburdaev, and Simon Alberti
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phase transition ,macromolecular assembly ,cytosolic pH ,starvation ,dormancy ,metabolism ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Cells can enter into a dormant state when faced with unfavorable conditions. However, how cells enter into and recover from this state is still poorly understood. Here, we study dormancy in different eukaryotic organisms and find it to be associated with a significant decrease in the mobility of organelles and foreign tracer particles. We show that this reduced mobility is caused by an influx of protons and a marked acidification of the cytoplasm, which leads to widespread macromolecular assembly of proteins and triggers a transition of the cytoplasm to a solid-like state with increased mechanical stability. We further demonstrate that this transition is required for cellular survival under conditions of starvation. Our findings have broad implications for understanding alternative physiological states, such as quiescence and dormancy, and create a new view of the cytoplasm as an adaptable fluid that can reversibly transition into a protective solid-like state.
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- 2016
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6. Precision Hydrogels for the Study of Cancer Cell Mechanobiology
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Jana Sievers, Vaibhav Mahajan, Petra B. Welzel, Carsten Werner, and Anna Taubenberger
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Biomaterials ,Biomedical Engineering ,Pharmaceutical Science - Published
- 2023
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7. Apico-basal cell compression regulates Lamin A/C levels in epithelial tissues
- Author
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Suzanne Eaton, K. Venkatesan Iyer, Anna Taubenberger, Frank Jülicher, Natalie A. Dye, and Salma Ahmed Zeidan
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0301 basic medicine ,Cell physiology ,congenital, hereditary, and neonatal diseases and abnormalities ,animal structures ,Science ,Cell ,Biophysics ,General Physics and Astronomy ,Mechanotransduction, Cellular ,General Biochemistry, Genetics and Molecular Biology ,Article ,Epithelium ,Cell Line ,Madin Darby Canine Kidney Cells ,Extracellular matrix ,03 medical and health sciences ,0302 clinical medicine ,Dogs ,medicine ,Animals ,Drosophila Proteins ,Mechanotransduction ,Nuclear protein ,Phosphorylation ,Cell Nucleus ,Multidisciplinary ,integumentary system ,Chemistry ,Nucleoskeleton ,General Chemistry ,Lamin Type A ,Lamins ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Cell culture ,embryonic structures ,Drosophila ,Stress, Mechanical ,030217 neurology & neurosurgery ,Lamin - Abstract
The levels of nuclear protein Lamin A/C are crucial for nuclear mechanotransduction. Lamin A/C levels are known to scale with tissue stiffness and extracellular matrix levels in mesenchymal tissues. But in epithelial tissues, where cells lack a strong interaction with the extracellular matrix, it is unclear how Lamin A/C is regulated. Here, we show in epithelial tissues that Lamin A/C levels scale with apico-basal cell compression, independent of tissue stiffness. Using genetic perturbations in Drosophila epithelial tissues, we show that apico-basal cell compression regulates the levels of Lamin A/C by deforming the nucleus. Further, in mammalian epithelial cells, we show that nuclear deformation regulates Lamin A/C levels by modulating the levels of phosphorylation of Lamin A/C at Serine 22, a target for Lamin A/C degradation. Taken together, our results reveal a mechanism of Lamin A/C regulation which could provide key insights for understanding nuclear mechanotransduction in epithelial tissues., The nuclear lamina bridges mechanical forces from the cytoskeleton to the nucleus, and while Lamin A/C is known to be crucial for this process, its regulation remains unclear. Here the authors show that levels of Lamin A/C scale with apico-basal compression of cells independently of tissue stiffness using Drosophila epithelial tissues and mammalian cells.
- Published
- 2021
8. Intelligent image-based deformation-assisted cell sorting with molecular specificity
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Martin Kräter, Christoph Herold, Martin Nötzel, Angela Jacobi, Shada Abuhattum, Anna Taubenberger, Ruchi Goswami, Ahmad Nawaz, Paul Müller, Salvatore Girardo, Philipp Rosendahl, Felix Reichel, Nicole Toepfner, Jochen Guck, Markéta Kubánková, Maik Herbig, and Marta Urbanska
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0303 health sciences ,Artificial neural network ,Computer science ,Sorting ,Cell Biology ,Cell sorting ,Biochemistry ,Cell size ,03 medical and health sciences ,Biological system ,Molecular Biology ,Cytometry ,Image based ,Cell survival ,030304 developmental biology ,Biotechnology - Abstract
Although label-free cell sorting is desirable for providing pristine cells for further analysis or use, current approaches lack molecular specificity and speed. Here, we combine real-time fluorescence and deformability cytometry with sorting based on standing surface acoustic waves and transfer molecular specificity to image-based sorting using an efficient deep neural network. In addition to general performance, we demonstrate the utility of this method by sorting neutrophils from whole blood without labels.
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- 2020
- Full Text
- View/download PDF
9. Correlative all-optical quantification of mass density and mechanics of subcellular compartments with fluorescence specificity
- Author
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Kyoohyun Kim, Raimund Schlüßler, Martin Nötzel, Anna Taubenberger, Shada Abuhattum, Timon Beck, Paul Müller, Shovamaye Maharana, Gheorghe Cojoc, Salvatore Girardo, Andreas Hermann, Simon Alberti, and Jochen Guck
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methods [Microscopy] ,QH301-705.5 ,optical diffraction tomography ,Science ,Cells ,Intracellular Space ,methods [Tomography, Optical] ,density measurement ,mechanical properties ,Physics of Living Systems ,Brillouin microscopy ,Fluorescence ,General Biochemistry, Genetics and Molecular Biology ,cell biology ,physics of living systems ,Tomography, Optical ,Humans ,HeLa cells ,human ,Biology (General) ,Cell Nucleus ,cytology [Cells] ,Microscopy ,General Immunology and Microbiology ,General Neuroscience ,Cell Biology ,General Medicine ,Refractometry ,phase transition ,Medicine ,ddc:600 ,Research Article ,Human ,ultrastructure [Cells] - Abstract
Quantitative measurements of physical parameters become increasingly important for understanding biological processes. Brillouin microscopy (BM) has recently emerged as one technique providing the 3D distribution of viscoelastic properties inside biological samples − so far relying on the implicit assumption that refractive index (RI) and density can be neglected. Here, we present a novel method (FOB microscopy) combining BM with optical diffraction tomography and epifluorescence imaging for explicitly measuring the Brillouin shift, RI, and absolute density with specificity to fluorescently labeled structures. We show that neglecting the RI and density might lead to erroneous conclusions. Investigating the nucleoplasm of wild-type HeLa cells, we find that it has lower density but higher longitudinal modulus than the cytoplasm. Thus, the longitudinal modulus is not merely sensitive to the water content of the sample − a postulate vividly discussed in the field. We demonstrate the further utility of FOB on various biological systems including adipocytes and intracellular membraneless compartments. FOB microscopy can provide unexpected scientific discoveries and shed quantitative light on processes such as phase separation and transition inside living cells.
- Published
- 2022
- Full Text
- View/download PDF
10. Author response: Correlative all-optical quantification of mass density and mechanics of subcellular compartments with fluorescence specificity
- Author
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Kyoohyun Kim, Raimund Schlüßler, Martin Nötzel, Anna Taubenberger, Shada Abuhattum, Timon Beck, Paul Müller, Shovamaye Maharana, Gheorghe Cojoc, Salvatore Girardo, Andreas Hermann, Simon Alberti, and Jochen Guck
- Published
- 2021
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11. De novo identification of universal cell mechanics gene signatures
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Maria Winzi, Martina Dori, Joanna Durgan, Fidel-Nicolás Lolo, Jochen Guck, Frederico Calegari, Martin Kräter, Carlo Vittorio Cannistraci, Oliver Florey, Anna Taubenberger, Maik Herbig, Nicole Toepfner, Yan Ge, Miguel A. del Pozo, Marta Urbanska, and Shada Abuhattum Hofemeier
- Subjects
Transcriptome ,medicine.anatomical_structure ,In silico ,Cell ,medicine ,Computational biology ,Cell fate determination ,Biology ,Stem cell ,Cytometry ,Phenotype ,Gene - Abstract
Mechanical proprieties determine many cellular functions, such as cell fate specification, migration, or circulation through vasculature. Identifying factors governing cell mechanical phenotype is therefore a subject of great interest. Here we present a mechanomics approach for establishing links between mechanical phenotype changes and the genes involved in driving them. We employ a machine learning-based discriminative network analysis method termed PC-corr to associate cell mechanical states, measured by real-time deformability cytometry (RT-DC), with large scale transcriptome datasets ranging from stem cell development to cancer progression, and originating from different murine and human tissues. By intersecting the discriminative networks inferred from two selected datasets, we identify a conserved module of five genes with putative roles in the regulation of cell mechanics. We validate the power of the individual genes to discriminate between soft and stiff cell states in silico, and demonstrate experimentally that the top scoring gene, CAV1, changes the mechanical phenotype of cells when silenced or overexpressed. The data-driven approach presented here has the power of de novo identification of genes involved in cell mechanics regulation and paves the way towards engineering cell mechanical properties on demand to explore their impact on physiological and pathological cell functions.
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- 2021
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12. Compliant Substrates Enhance Macrophage Cytokine Release and NLRP3 Inflammasome Formation During Their Pro-Inflammatory Response
- Author
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Clare E. Bryant, Shada Abuhattum, Jochen Guck, Aleeza Farrukh, Aránzazu del Campo, Christine Schweitzer, Anna Taubenberger, Joan-Carles Escolano, Bryant, Clare [0000-0002-2924-0038], and Apollo - University of Cambridge Repository
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substrate stiffness ,medicine.medical_treatment ,ASC ,Cell and Developmental Biology ,Immune system ,Downregulation and upregulation ,medicine ,Macrophage ,actomyosin contractility ,lcsh:QH301-705.5 ,innate immunity ,Original Research ,Innate immune system ,Chemistry ,Inflammasome ,Cell Biology ,NLRP3 inflammasome ,Cell biology ,macrophages ,Cytokine ,lcsh:Biology (General) ,Tumor necrosis factor alpha ,Mechanosensitive channels ,mechanosensing ,Developmental Biology ,medicine.drug - Abstract
Immune cells process a myriad of biochemical signals but their function and behavior are also determined by mechanical cues. Macrophages are no exception to this. Being present in all types of tissues, macrophages are exposed to environments of varying stiffness, which can be further altered under pathological conditions. While it is becoming increasingly clear that macrophages are mechanosensitive, it remains poorly understood how mechanical cues modulate their inflammatory response. Here we report that substrate stiffness influences the expression of pro-inflammatory genes and the formation of the NLRP3 inflammasome, leading to changes in the secreted protein levels of the cytokines IL-1β and IL-6. Using polyacrylamide hydrogels of tunable elastic moduli between 0.2 and 33.1 kPa, we found that bone marrow-derived macrophages adopted a less spread and rounder morphology on compliant compared to stiff substrates. Upon LPS priming, the expression levels of the gene encoding for TNF-α were higher on more compliant hydrogels. When additionally stimulating macrophages with the ionophore nigericin, we observed an enhanced formation of the NLRP3 inflammasome, increased levels of cell death, and higher secreted protein levels of IL-1β and IL-6 on compliant substrates. The upregulation of inflammasome formation on compliant substrates was not primarily attributed to the decreased cell spreading, since spatially confining cells on micropatterns led to a reduction of inflammasome-positive cells compared to well-spread cells. Finally, interfering with actomyosin contractility diminished the differences in inflammasome formation between compliant and stiff substrates. In summary, we show that substrate stiffness modulates the pro-inflammatory response of macrophages, that the NLRP3 inflammasome is one of the components affected by macrophage mechanosensing, and a role for actomyosin contractility in this mechanosensory response. Thus, our results contribute to a better understanding of how microenvironment stiffness affects macrophage behavior, which might be relevant in diseases where tissue stiffness is altered and might potentially provide a basis for new strategies to modulate inflammatory responses.
- Published
- 2021
13. Correlative all-optical quantification of mass density and mechanics of sub-cellular compartments with fluorescence specificity
- Author
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Raimund Schlüßler, Andreas Hermann, Jochen Guck, Martin Nötzel, Anna Taubenberger, Simon Alberti, Shada Abuhattum Hofemeier, Gheorghe Cojoc, Kyoohyun Kim, Timon Beck, Paul Müller, Shovamayee Maharana, and Salvatore Girardo
- Subjects
Brillouin zone ,Nucleoplasm ,Materials science ,Field (physics) ,Microscopy ,Tomography ,Fluorescence ,Refractive index ,Molecular physics ,Viscoelasticity - Abstract
Quantitative measurements of physical parameters become increasingly important for understanding biological processes. Brillouin microscopy (BM) has recently emerged as one technique providing the 3D distribution of viscoelastic properties inside biological samples — so far relying on the implicit assumption that refractive index (RI) and density can be neglected. Here, we present a novel method (FOB microscopy) combining BM with optical diffraction tomography and epi-fluorescence imaging for explicitly measuring the Brillouin shift, RI and absolute density with specificity to fuorescently labeled structures. We show that neglecting the RI and density might lead to erroneous conclusions. Investigating the nucleoplasm of wild-type HeLa cells, we find that it has lower density but higher longitudinal modulus than the cytoplasm. Thus, the longitudinal modulus is not merely sensitive to the water content of the sample — a postulate vividly discussed in the field. We demonstrate the further utility of FOB on various biological systems including adipocytes and intracellular membraneless compartments. FOB microscopy can provide unexpected scientific discoveries and shed quantitative light on processes such as phase separation and transition inside living cells.
- Published
- 2020
- Full Text
- View/download PDF
14. Estrogens Determine Adherens Junction Organization and E-Cadherin Clustering in Breast Cancer Cells via Amphiregulin
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Anna Taubenberger, Philip Bischoff, Jochen Guck, Thorsten Mielke, Michael Oelgeschläger, Sebastian Dunst, Beatrix Fauler, Gilbert Schönfelder, Marja Kornhuber, and Jakob Zell
- Subjects
0301 basic medicine ,02 engineering and technology ,Article ,Adherens junction ,03 medical and health sciences ,Breast cancer ,Amphiregulin ,medicine ,Epidermal growth factor receptor ,lcsh:Science ,Cancer ,Multidisciplinary ,biology ,Chemistry ,Cadherin ,Cell Biology ,021001 nanoscience & nanotechnology ,medicine.disease ,030104 developmental biology ,Cancer research ,biology.protein ,lcsh:Q ,0210 nano-technology ,Estrogen receptor alpha ,Adherens junction organization - Abstract
Summary Estrogens play an important role in the development and progression of human cancers, particularly in breast cancer. Breast cancer progression depends on the malignant destabilization of adherens junctions (AJs) and disruption of tissue integrity. We found that estrogen receptor alpha (ERα) inhibition led to a striking spatial reorganization of AJs and microclustering of E-Cadherin (E-Cad) in the cell membrane of breast cancer cells. This resulted in increased stability of AJs and cell stiffness and a reduction of cell motility. These effects were actomyosin-dependent and reversible by estrogens. Detailed investigations showed that the ERα target gene and epidermal growth factor receptor (EGFR) ligand Amphiregulin (AREG) essentially regulates AJ reorganization and E-Cad microclustering. Our results not only describe a biological mechanism for the organization of AJs and the modulation of mechanical properties of cells but also provide a new perspective on how estrogens and anti-estrogens might influence the formation of breast tumors., Graphical Abstract, Highlights • ERα inhibition causes adherens junction (AJ) reorganization through AREG and EGFR • AJ reorganization coincides with microclustering of E-Cadherin at cell membranes • AJ reorganization and microclustering of E-Cadherin are actomyosin dependent • AJ reorganization correlates with increased cell stiffness and reduced motility, Cell Biology; Cancer
- Published
- 2020
15. The Mechanics of Mitotic Cell Rounding
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Anna Taubenberger, Buzz Baum, and Helen K. Matthews
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0301 basic medicine ,Cell division ,actin cortex ,Cell ,Review ,myosin ,Cell and Developmental Biology ,03 medical and health sciences ,0302 clinical medicine ,cell mechanics ,Myosin ,medicine ,Osmotic pressure ,lcsh:QH301-705.5 ,Mitosis ,Actin ,mitosis ,Chemistry ,Cell Biology ,ezrin ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,lcsh:Biology (General) ,osmotic pressure ,030220 oncology & carcinogenesis ,Ect2 ,mitotic rounding ,Multipolar spindles ,Intracellular ,Developmental Biology - Abstract
When animal cells enter mitosis, they round up to become spherical. This shape change is accompanied by changes in mechanical properties. Multiple studies using different measurement methods have revealed that cell surface tension, intracellular pressure and cortical stiffness increase upon entry into mitosis. These cell-scale, biophysical changes are driven by alterations in the composition and architecture of the contractile acto-myosin cortex together with osmotic swelling and enable a mitotic cell to exert force against the environment. When the ability of cells to round is limited, for example by physical confinement, cells suffer severe defects in spindle assembly and cell division. The requirement to push against the environment to create space for spindle formation is especially important for cells dividing in tissues. Here we summarize the evidence and the tools used to show that cells exert rounding forces in mitosis in vitro and in vivo, review the molecular basis for this force generation and discuss its function for ensuring successful cell division in single cells and for cells dividing in normal or diseased tissues.
- Published
- 2020
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16. Standardized microgel beads as elastic cell mechanical probes
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Maik Herbig, Mirjam Schuermann, Dominic Mokbel, Christoph Herold, Felix Reichel, Thomas Heida, Julian Thiele, Shada Abuhattum, Raimund Schluessler, Paul Müller, Nicole Träber, Katrin Wagner, Carsten Werner, Angela Jacobi, Gheorghe Cojoc, Jochen Guck, Anna Taubenberger, Salvatore Girardo, Ruchi Goswami, and Elke Ulbricht
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0301 basic medicine ,chemistry.chemical_classification ,Materials science ,Optical diffraction ,Microfluidics ,Biomedical Engineering ,General Chemistry ,General Medicine ,Polymer ,Nanoindentation ,03 medical and health sciences ,030104 developmental biology ,chemistry ,Microscopy ,General Materials Science ,Elasticity (economics) ,Composite material ,Cytometry ,Elastic modulus - Abstract
Cell mechanical measurements are gaining increasing interest in biological and biomedical studies. However, there are no standardized calibration particles available that permit the cross-comparison of different measurement techniques operating at different stresses and time-scales. Here we present the rational design, production, and comprehensive characterization of poly-acrylamide (PAAm) microgel beads mimicking size and overall mechanics of biological cells. We produced mono-disperse beads at rates of 20–60 kHz by means of a microfluidic droplet generator, where the pre-gel composition was adjusted to tune the beads’ elasticity in the range of cell and tissue relevant mechanical properties. We verified bead homogeneity by optical diffraction tomography and Brillouin microscopy. Consistent elastic behavior of microgel beads at different shear rates was confirmed by AFM-enabled nanoindentation and real-time deformability cytometry (RT-DC). The remaining inherent variability in elastic modulus was rationalized using polymer theory and effectively reduced by sorting based on forward-scattering using conventional flow cytometry. Our results show that PAAm microgel beads can be standardized as mechanical probes, to serve not only for validation and calibration of cell mechanical measurements, but also as cell-scale stress sensors.
- Published
- 2020
17. Image-based cell sorting using artificial intelligence
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Ruchi Goswami, Salvatore Girardo, Maik Herbig, Philipp Rosendahl, Felix Reichel, Jochen Guck, Shada Abuhattum, Paul Müller, Angela Jacobi, Nicole Töpfner, Marta Urbanska, Anna Taubenberger, Markéta Kubánková, Ahmad Nawaz, Martin Nötzel, Christoph Herold, and Martin Kräter
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Transplantation ,business.industry ,Computer science ,Deep learning ,Microfluidics ,Sorting ,sort ,Pattern recognition ,Image processing ,Artificial intelligence ,Cell sorting ,business ,Signal - Abstract
Identification of different cell types is an indispensable part in biomedical research and clinical application. During the last decades, much attention was put onto molecular characterization and many cell types can now be identified and sorted based on established markers. The required staining process is a lengthy and costly treatment, which can cause alterations of cellular properties, contaminate the sample and therefore limit its subsequent use. A promising alternative to molecular markers is the label-free identification of cells using mechanical or morphological features. We introduce a microfluidic device for active label-free sorting of cells based on their bright field image supported by innovative real-time image processing and deep neural networks (DNNs). A microfluidic chip features a standing surface acoustic wave generator for actively pushing up to 100 cells/sec to a determined outlet for collection. This novel method is successfully applied for enrichment of lymphocytes, granulo-monocytes and red blood cells from human blood. Furthermore, we combined the setup with lasers and a fluorescence detection unit, allowing to assign a fluorescence signal to each captured bright-field image. Leveraging this tool and common molecular staining, we created a labelled dataset containing thousands of images of different blood cells. We used this dataset to train a DNN with optimized latency below 1 ms and used it to sort unstained neutrophils from human blood, resulting in a target concentration of 90%. The innovative approach to use deep learning for image-based sorting opens up a wide field of potential applications, for example label-free enrichment of stem-cells for transplantation.
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- 2020
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18. Mapping Tumor Spheroid Mechanics in Dependence of 3D Microenvironment Stiffness and Degradability by Brillouin Microscopy
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André Ruland, Timon Beck, V. Mahajan, Carsten Werner, Raimund Schluessler, Jochen Guck, P. Gregorczyk, Simon Alberti, and Anna Taubenberger
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3D culture ,Cancer Research ,Context (language use) ,Polyethylene glycol ,macromolecular substances ,Matrix (biology) ,Brillouin microscopy ,Article ,chemistry.chemical_compound ,cell mechanics ,tumor microenvironment ,Elastic modulus ,RC254-282 ,Tumor microenvironment ,atomic force microscopy ,Chemistry ,technology, industry, and agriculture ,Spheroid ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Mechanics ,tumor spheroid ,compression ,Brillouin zone ,Oncology ,confinement ,embryonic structures ,Self-healing hydrogels ,Cancer cell - Abstract
Simple Summary Little is known about how cancer cells adapt their mechanical properties in complex 3D microenvironments. Here we generated different types of tumor spheroids within compliant or stiff hydrogels. We then quantitatively mapped the mechanical properties of these spheroids in situ using Brillouin microscopy. Maps acquired for tumor spheroids grown within stiffer hydrogels showed elevated Brillouin shifts, hence spheroids became “stiffer” compared to the ones cultured within compliant gels. The spheroid’s mechanical properties were modulated by various microenvironment properties including matrix stiffness and degradability and the resultant compressive stress but also depending on whether single cells or cell aggregates were analyzed. Moreover, spheroids generated from a panel of invasive breast, prostate and pancreatic cancer cell lines within degradable stiff hydrogels became stiffer and at the same time, less invasive compared to those in compliant hydrogels. Taken together, our findings contribute to a better understanding of the interplay between cancer cells and their microenvironment, which is relevant to better understand cancer progression. Abstract Altered biophysical properties of cancer cells and of their microenvironment contribute to cancer progression. While the relationship between microenvironmental stiffness and cancer cell mechanical properties and responses has been previously studied using two-dimensional (2D) systems, much less is known about it in a physiologically more relevant 3D context and in particular for multicellular systems. To investigate the influence of microenvironment stiffness on tumor spheroid mechanics, we first generated MCF-7 tumor spheroids within matrix metalloproteinase (MMP)-degradable 3D polyethylene glycol (PEG)-heparin hydrogels, where spheroids showed reduced growth in stiffer hydrogels. We then quantitatively mapped the mechanical properties of tumor spheroids in situ using Brillouin microscopy. Maps acquired for tumor spheroids grown within stiff hydrogels showed elevated Brillouin frequency shifts (hence increased longitudinal elastic moduli) with increasing hydrogel stiffness. Maps furthermore revealed spatial variations of the mechanical properties across the spheroids’ cross-sections. When hydrogel degradability was blocked, comparable Brillouin frequency shifts of the MCF-7 spheroids were found in both compliant and stiff hydrogels, along with similar levels of growth-induced compressive stress. Under low compressive stress, single cells or free multicellular aggregates showed consistently lower Brillouin frequency shifts compared to spheroids growing within hydrogels. Thus, the spheroids’ mechanical properties were modulated by matrix stiffness and degradability as well as multicellularity, and also to the associated level of compressive stress felt by tumor spheroids. Spheroids generated from a panel of invasive breast, prostate and pancreatic cancer cell lines within degradable stiff hydrogels, showed higher Brillouin frequency shifts and less cell invasion compared to those in compliant hydrogels. Taken together, our findings contribute to a better understanding of the interplay between cancer cells and microenvironment mechanics and degradability, which is relevant to better understand cancer progression.
- Published
- 2021
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19. Single-cell mechanical phenotype is an intrinsic marker of reprogramming and differentiation along the mouse neural lineage
- Author
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Konstantinos Anastassiadis, Maria Winzi, Marta Urbanska, Shada Abuhattum, Paul Müller, Anna Taubenberger, Philipp Rosendahl, Katrin Neumann, and Jochen Guck
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0301 basic medicine ,Induced Pluripotent Stem Cells ,Lewis X Antigen ,Embryoid body ,Biology ,Mice ,03 medical and health sciences ,Neural Stem Cells ,Animals ,Cell Lineage ,Induced pluripotent stem cell ,Molecular Biology ,Induced stem cells ,CD24 Antigen ,Cell Differentiation ,Cellular Reprogramming ,Phenotype ,Embryonic stem cell ,Neural stem cell ,Biomechanical Phenomena ,Cell biology ,Mice, Inbred C57BL ,Endothelial stem cell ,030104 developmental biology ,Single-Cell Analysis ,Reprogramming ,Biomarkers ,Developmental Biology - Abstract
Cellular reprogramming is a dedifferentiation process during which cells continuously undergo phenotypical remodeling. Although the genetic and biochemical details of this remodeling are fairly well understood, little is known about the change in cell mechanical properties during the process. In this study, we investigated changes in the mechanical phenotype of murine fetal neural progenitor cells (fNPCs) during reprogramming to induced pluripotent stem cells (iPSCs). We find that fNPCs become progressively stiffer en route to pluripotency, and that this stiffening is mirrored by iPSCs becoming more compliant during differentiation towards the neural lineage. Furthermore, we show that the mechanical phenotype of iPSCs is comparable with that of embryonic stem cells. These results suggest that mechanical properties of cells are inherent to their developmental stage. They also reveal that pluripotent cells can differentiate towards a more compliant phenotype, which challenges the view that pluripotent stem cells are less stiff than any cells more advanced developmentally. Finally, our study indicates that the cell mechanical phenotype might be utilized as an inherent biophysical marker of pluripotent stem cells.
- Published
- 2017
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20. Engineering a humanized bone organ model in mice to study bone metastases
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Parisa Hesami, Jacqui A. McGovern, Bianca Nowlan, Davide Moi, Boris Michael Holzapfel, Elena M. De-Juan-Pardo, Verena M.C. Quent, Cosmo Orlando Hutmacher, Jean-Pierre Levesque, Elia Piccinini, Cedryck Vaquette, Tatiana Oussenko, Peter W. Zandstra, Felix M. Wunner, Ferdinand Wagner, Roberta Mazzieri, Laure Martine, Dan Jing Wu, Anna Taubenberger, Toby D. Brown, Paul D. Dalton, Dietmar W. Hutmacher, and Soft Tissue Biomech. & Tissue Eng.
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0301 basic medicine ,Male ,Bone Morphogenetic Protein 7 ,Bone Neoplasms ,Breast Neoplasms ,Biology ,Adenocarcinoma ,SDG 3 – Goede gezondheid en welzijn ,General Biochemistry, Genetics and Molecular Biology ,Bone and Bones ,Extracellular matrix ,03 medical and health sciences ,Mice ,Breast cancer ,Tissue engineering ,Electricity ,SDG 3 - Good Health and Well-being ,In vivo ,medicine ,Bone organ ,Animals ,Humans ,Tissue Engineering ,Hematopoietic Stem Cell Transplantation ,Prostatic Neoplasms ,medicine.disease ,Extracellular Matrix ,Haematopoiesis ,Disease Models, Animal ,030104 developmental biology ,Primary bone ,Immunology ,Cancer research ,090301 Biomaterials ,Female ,Stem cell ,111299 Oncology and Carcinogenesis not elsewhere classified - Abstract
Current in vivo models for investigating human primary bone tumors and cancer metastasis to the bone rely on the injection of human cancer cells into the mouse skeleton. This approach does not mimic species-specific mechanisms occurring in human diseases and may preclude successful clinical translation. We have developed a protocol to engineer humanized bone within immunodeficient hosts, which can be adapted to study the interactions between human cancer cells and a humanized bone microenvironment in vivo. A researcher trained in the principles of tissue engineering will be able to execute the protocol and yield study results within 4-6 months. Additive biomanufactured scaffolds seeded and cultured with human bone-forming cells are implanted ectopically in combination with osteogenic factors into mice to generate a physiological bone 'organ', which is partially humanized. The model comprises human bone cells and secreted extracellular matrix (ECM); however, other components of the engineered tissue, such as the vasculature, are of murine origin. The model can be further humanized through the engraftment of human hematopoietic stem cells (HSCs) that can lead to human hematopoiesis within the murine host. The humanized organ bone model has been well characterized and validated and allows dissection of some of the mechanisms of the bone metastatic processes in prostate and breast cancer.
- Published
- 2017
21. Using real-time fluorescence and deformability cytometry and deep learning to transfer molecular specificity to label-free sorting
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Ruchi Goswami, Maik Herbig, Markéta Kubánková, Martin Nötzel, Jochen Guck, Nicole Toepfner, Anna Taubenberger, Angela Jacobi, Philipp Rosendahl, Ahmad Nawaz, Paul Müller, Martin Kräter, Christoph Herold, Salvatore Girardo, Shada Abuhattum, Felix Reichel, and Marta Urbanska
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0303 health sciences ,Artificial neural network ,Computer science ,Sorting ,02 engineering and technology ,Cell sorting ,021001 nanoscience & nanotechnology ,Fluorescence ,Transplantation ,Blood cell ,03 medical and health sciences ,medicine.anatomical_structure ,medicine ,sort ,0210 nano-technology ,Biological system ,Cytometry ,030304 developmental biology - Abstract
The identification and separation of specific cells from heterogeneous populations is an essential prerequisite for further analysis or use. Conventional passive and active separation approaches rely on fluorescent or magnetic tags introduced to the cells of interest through molecular markers. Such labeling is time- and cost-intensive, can alter cellular properties, and might be incompatible with subsequent use, for example, in transplantation. Alternative label-free approaches utilizing morphological or mechanical features are attractive, but lack molecular specificity. Here we combine image-based real-time fluorescence and deformability cytometry (RT-FDC) with downstream cell sorting using standing surface acoustic waves (SSAW). We demonstrate basic sorting capabilities of the device by separating cell mimics and blood cell types based on fluorescence as well as deformability and other image parameters. The identification of blood sub-populations is enhanced by flow alignment and deformation of cells in the microfluidic channel constriction. In addition, the classification of blood cells using established fluorescence-based markers provides hundreds of thousands of labeled cell images used to train a deep neural network. The trained algorithm, with latency optimized to below 1 ms, is then used to identify and sort unlabeled blood cells at rates of 100 cells/sec. This approach transfers molecular specificity into label-free sorting and opens up new possibilities for basic biological research and clinical therapeutic applications.
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- 2019
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22. Intelligent image-based deformation-assisted cell sorting with molecular specificity
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Ahmad Ahsan, Nawaz, Marta, Urbanska, Maik, Herbig, Martin, Nötzel, Martin, Kräter, Philipp, Rosendahl, Christoph, Herold, Nicole, Toepfner, Markéta, Kubánková, Ruchi, Goswami, Shada, Abuhattum, Felix, Reichel, Paul, Müller, Anna, Taubenberger, Salvatore, Girardo, Angela, Jacobi, and Jochen, Guck
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Erythrocytes ,Cell Survival ,Neutrophils ,Microfluidics ,Cell Culture Techniques ,HL-60 Cells ,Flow Cytometry ,Cell Line ,Sound ,Erythrocyte Deformability ,Animals ,Humans ,Drosophila ,Myeloid Cells ,Neural Networks, Computer ,Cell Proliferation ,Cell Size - Abstract
Although label-free cell sorting is desirable for providing pristine cells for further analysis or use, current approaches lack molecular specificity and speed. Here, we combine real-time fluorescence and deformability cytometry with sorting based on standing surface acoustic waves and transfer molecular specificity to image-based sorting using an efficient deep neural network. In addition to general performance, we demonstrate the utility of this method by sorting neutrophils from whole blood without labels.
- Published
- 2019
23. nanite: using machine learning to assess the quality of atomic force microscopy-enabled nano-indentation data
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Jochen Guck, Paul Müller, Elke Ulbricht, Anna Taubenberger, Stephanie Möllmert, and Shada Abuhattum
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Computer science ,02 engineering and technology ,Microscopy, Atomic Force ,lcsh:Computer applications to medicine. Medical informatics ,Biochemistry ,03 medical and health sciences ,Automation ,Atomic force microscopy ,Structural Biology ,Machine learning ,Animals ,Nanotechnology ,Molecular Biology ,lcsh:QH301-705.5 ,Zebrafish ,030304 developmental biology ,0303 health sciences ,business.industry ,Applied Mathematics ,Methodology Article ,Sorting ,Pattern recognition ,Adhesion ,Biological tissue ,Nanoindentation ,021001 nanoscience & nanotechnology ,Elasticity ,Computer Science Applications ,Data Accuracy ,lcsh:Biology (General) ,lcsh:R858-859.7 ,Artificial intelligence ,0210 nano-technology ,business ,Software - Abstract
Background Atomic force microscopy (AFM) allows the mechanical characterization of single cells and live tissue by quantifying force-distance (FD) data in nano-indentation experiments. One of the main problems when dealing with biological tissue is the fact that the measured FD curves can be disturbed. These disturbances are caused, for instance, by passive cell movement, adhesive forces between the AFM probe and the cell, or insufficient attachment of the tissue to the supporting cover slide. In practice, the resulting artifacts are easily spotted by an experimenter who then manually sorts out curves before proceeding with data evaluation. However, this manual sorting step becomes increasingly cumbersome for studies that involve numerous measurements or for quantitative imaging based on FD maps. Results We introduce the Python package nanite, which automates all basic aspects of FD data analysis, including data import, tip-sample separation, base line correction, contact point retrieval, and model fitting. In addition, nanite enables the automation of the sorting step using supervised learning. This learning approach relates subjective ratings to predefined features extracted from FD curves. For ratings ranging from 0 to 10, our approach achieves a mean squared error below 1.0 rating points and a classification accuracy between good and poor curves that is above 87%. We showcase our approach by quantifying Young’s moduli of the zebrafish spinal cord at different classification thresholds and by introducing data quality as a new dimension for quantitative AFM image analysis. Conclusion The addition of quality-based sorting using supervised learning enables a fully automated and reproducible FD data analysis pipeline for biological samples in AFM.
- Published
- 2019
24. Zebrafish spinal cord repair is accompanied by transient tissue stiffening
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Stephanie Möllmert, Maria A. Kharlamova, Michael Brand, Anna Taubenberger, Shada Abuhattum, Thomas Kurth, Jochen Guck, Tobias Hoche, and Veronika Kuscha
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Spinal Cord Regeneration ,Pathology ,medicine.medical_specialty ,Biophysics ,White matter ,03 medical and health sciences ,0302 clinical medicine ,New and Notables ,medicine ,Animals ,Axon ,Zebrafish ,Loss function ,Mechanical Phenomena ,030304 developmental biology ,0303 health sciences ,biology ,Regeneration (biology) ,Neurogenesis ,biology.organism_classification ,Spinal cord ,Oligodendrocyte ,Biomechanical Phenomena ,medicine.anatomical_structure ,Spinal Cord ,030217 neurology & neurosurgery - Abstract
Severe injury to the mammalian spinal cord results in permanent loss of function due to the formation of a glial-fibrotic scar. Both the chemical composition and the mechanical properties of the scar tissue have been implicated to inhibit neuronal regrowth and functional recovery. By contrast, adult zebrafish are able to repair spinal cord tissue and restore motor function after complete spinal cord transection owing to a complex cellular response that includes neurogenesis and axon regrowth. The mechanical mechanisms contributing to successful spinal cord repair in adult zebrafish are, however, currently unknown. Here, we employ AFM-enabled nano-indentation to determine the spatial distributions of apparent elastic moduli of living spinal cord tissue sections obtained from uninjured zebrafish and at distinct time points after complete spinal cord transection. In uninjured specimens, spinal gray matter regions were stiffer than white matter regions. During regeneration after transection, the spinal cord tissues displayed a significant increase of the respective apparent elastic moduli that transiently obliterated the mechanical difference between the two types of matter, before returning to baseline values after completion of repair. Tissue stiffness correlated variably with cell number density, oligodendrocyte interconnectivity, axonal orientation, and vascularization. The presented work constitutes the first quantitative mapping of the spatio-temporal changes of spinal cord tissue stiffness in regenerating adult zebrafish and provides the tissue mechanical basis for future studies into the role of mechanosensing in spinal cord repair.
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- 2019
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25. 3D microenvironment stiffness regulates tumor spheroid growth and mechanics via p21 and ROCK
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Katrin Wagner, Carsten Werner, Marcus Binner, Thomas Kurth, Anna Taubenberger, Jochen Guck, Dominik Hahn, Nicole Träber, Salvatore Girardo, Barbara Haller, Uwe Freudenberg, Elisabeth Fischer-Friedrich, Martin Kräter, and Isabel Richter
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Cyclin-Dependent Kinase Inhibitor p21 ,Tumor spheroid ,Cell ,Biomedical Engineering ,Acrylic Resins ,Cell Culture Techniques ,Context (language use) ,macromolecular substances ,Mechanotransduction, Cellular ,General Biochemistry, Genetics and Molecular Biology ,Polyethylene Glycols ,Biomaterials ,Spheroids, Cellular ,medicine ,Tumor Microenvironment ,Humans ,Cytoskeleton ,Cell Proliferation ,Tumor microenvironment ,rho-Associated Kinases ,Chemistry ,Kinase ,Heparin ,technology, industry, and agriculture ,Stiffness ,Hydrogels ,equipment and supplies ,G1 Phase Cell Cycle Checkpoints ,Actins ,Biomechanical Phenomena ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,Self-healing hydrogels ,Cancer cell ,embryonic structures ,Biophysics ,MCF-7 Cells ,Female ,medicine.symptom ,Single-Cell Analysis - Abstract
Mechanical properties of cancer cells and their microenvironment contribute to breast cancer progression. While mechanosensing has been extensively studied using two-dimensional (2D) substrates, much less is known about it in a physiologically more relevant 3D context. Here we demonstrate that breast cancer tumor spheroids, growing in 3D polyethylene glycol-heparin hydrogels, are sensitive to their environment stiffness. During tumor spheroid growth, compressive stresses of up to 2 kPa built up, as quantitated using elastic polymer beads as stress sensors. Atomic force microscopy (AFM) revealed that tumor spheroid stiffness increased with hydrogel stiffness. Also, constituent cell stiffness increased in a ROCK- and F-actin-dependent manner. Increased hydrogel stiffness correlated with attenuated tumor spheroid growth, a higher proportion of cells in G0/G1 phase and elevated levels of the cyclin-dependent kinase inhibitor p21. Drug-mediated ROCK inhibition reversed not only cell stiffening upon culture in stiff hydrogels but also increased tumor spheroid growth. Taken together, we reveal here a mechanism by which the growth of a tumor spheroid can be regulated via cytoskeleton rearrangements in response to its mechanoenvironment. Thus, our findings contribute to a better understanding of how cancer cells react to compressive stress when growing under confinement in stiff environments and provide the basis for a more in-depth exploration of the underlying mechanosensory response.
- Published
- 2019
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26. Oncogenic signaling alters cell shape and mechanics to facilitate cell division under confinement
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Anna Taubenberger, Katarzyna Plak, Sushila Ganguli, Matthieu Piel, Jochen Guck, Helen K. Matthews, and Buzz Baum
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Chromosome segregation ,Signalling ,Oncogene ,Cell division ,Chemistry ,Oncogenic signaling ,Interphase ,Cell shape ,Mitosis ,Cell biology - Abstract
When cells enter mitosis, they become spherical and mechanically stiffen. We used MCF10A cell lines as a model system in which to investigate the effect of induced oncogene expression on mitotic entry. We find that activation of oncogenic RasV12, for as little as five hours, changes the way cells divide. RasV12-dependent activation of the MEK-ERK signalling cascade alters acto-myosin contractility to enhance mitotic rounding. RasV12also affects cell mechanics, so that RasV12expressing cells are softer in interphase but stiffen more upon entry into mitosis. As a consequence, RasV12expression augments the ability of cells to round up and divide faithfully when confined underneath a stiff hydrogel. Conversely, inhibition of the Ras-ERK pathway reduces mitotic rounding under confinement, resulting in chromosome segregation defects. These data suggest a novel mechanism by which oncogenic Ras-ERK signalling can aid division in stiff environments like those found in tumours.
- Published
- 2019
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27. 3D extracellular matrix interactions modulate tumour cell growth, invasion and angiogenesis in engineered tumour microenvironments
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Barbara Haller, Anna Taubenberger, Artem Shaposhnykov, Jochen Guck, Carsten Werner, Marcus Binner, Uwe Freudenberg, and Laura J. Bray
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Male ,0301 basic medicine ,Angiogenesis ,Integrin ,Biomedical Engineering ,Breast Neoplasms ,Models, Biological ,Biochemistry ,Biomaterials ,Extracellular matrix ,03 medical and health sciences ,090399 Biomedical Engineering not elsewhere classified ,Breast Cancer ,LNCaP ,Tumor Microenvironment ,Humans ,Molecular Biology ,Integrin binding ,Tumor microenvironment ,Neovascularization, Pathologic ,biology ,Prostate Cancer ,Mesenchymal stem cell ,Prostatic Neoplasms ,Hydrogels ,General Medicine ,Extracellular Matrix ,Cell biology ,030104 developmental biology ,Cancer cell ,090301 Biomaterials ,MCF-7 Cells ,biology.protein ,Female ,Peptides ,Biotechnology - Abstract
Interactions between tumour cells and extracellular matrix proteins of the tumour microenvironment play crucial roles in cancer progression. So far, however, there are only a few experimental platforms available that allow us to study these interactions systematically in a mechanically defined three-dimensional (3D) context. Here, we have studied the effect of integrin binding motifs found within common extracellular matrix (ECM) proteins on 3D breast (MCF-7) and prostate (PC-3, LNCaP) cancer cell cultures, and co-cultures with endothelial and mesenchymal stromal cells. For this purpose, matrix metalloproteinase-degradable biohybrid poly(ethylene) glycol-heparin hydrogels were decorated with the peptide motifs RGD, GFOGER (collagen I), or IKVAV (laminin-111). Over 14days, cancer spheroids of 100-200μm formed. While the morphology of poorly invasive MCF-7 and LNCaP cells was not modulated by any of the peptide motifs, the aggressive PC-3 cells exhibited an invasive morphology when cultured in hydrogels comprising IKVAV and GFOGER motifs compared to RGD motifs or nonfunctionalised controls. PC-3 (but not MCF-7 and LNCaP) cell growth and endothelial cell infiltration were also significantly enhanced in IKVAV and GFOGER presenting gels. Taken together, we have established a 3D culture model that allows for dissecting the effect of biochemical cues on processes relevant to early cancer progression. These findings provide a basis for more mechanistic studies that may further advance our understanding of how ECM modulates cancer cell invasion and how to ultimately interfere with this process.Threedimensional in vitro cancer models have generated great interest over the past decade. However, most models are not suitable to systematically study the effects of environmental cues on cancer development and progression. To overcome this limitation, we have developed an innovative hydrogel platform to study the interactions between breast and prostate cancer cells and extracellular matrix ligands relevant to the tumour microenvironment. Our results show that hydrogels with laminin- and collagen-derived adhesive peptides induce a malignant phenotype in a cell-line specific manner. Thus, we have identified a method to control the incorporation of biochemical cues within a three dimensional culture model and anticipate that it will help us in better understanding the effects of the tumour microenvironment on cancer progression.
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- 2016
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28. Acquired demyelination but not genetic developmental defects in myelination leads to brain tissue stiffness changes
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Georgia Fodelianaki, Thomas Kurth, Nicolas Träber, Krystyn J. Van Vliet, Stephanie Möllmert, Elke Ulbricht, Joan-Carles Escolano, Anna Jagielska, Katrin Wagner, Dominic Eberle, Anna Taubenberger, and Jochen Guck
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Multiple sclerosis ,Regeneration (biology) ,Cell ,Stiffness ,Neurosciences. Biological psychiatry. Neuropsychiatry ,General Medicine ,Disease ,Grey matter ,Biology ,medicine.disease ,Tissue stiffness ,Atomic force microscopy ,Cuprizone ,medicine.anatomical_structure ,Shiverer ,medicine ,Demyelination ,medicine.symptom ,Remyelination ,Neuroscience ,Ex vivo ,RC321-571 - Abstract
Changes in axonal myelination are an important hallmark of aging and a number of neurological diseases. Demyelinated axons are impaired in their function and degenerate over time. Oligodendrocytes, the cells responsible for myelination of axons, are sensitive to mechanical properties of their environment. Growing evidence indicates that mechanical properties of demyelinating lesions are different from the healthy state and thus have the potential to affect myelinating potential of oligodendrocytes. We performed a high-resolution spatial mapping of the mechanical heterogeneity of demyelinating lesions using atomic force microscope-enabled indentation. Our results indicate that the stiffness of specific regions of mouse brain tissue is influenced by age and degree of myelination. Here we specifically demonstrate that acquired acute but not genetic demyelination leads to decreased tissue stiffness, which could influence the remyelination potential of oligodendrocytes. We also demonstrate that specific brain regions have unique ranges of stiffness in white and grey matter. Our ex vivo findings may help the design of future in vitro models to mimic the mechanical environment of the brain in healthy and diseased states. The mechanical properties of demyelinating lesions reported here may facilitate novel approaches in treating demyelinating diseases such as multiple sclerosis. Statement of Significance Mechanical characteristics of a cell's environment can have a profound influence on its biological properties. Neuronal and glial cells are sensitive to mechanical input during development, in disease and regeneration. Sustained tensile strain can promote differentiation of oligodendrocyte progenitor cells into mature oligodendrocytes, which are responsible for the myelination of axons. Changing myelination is an important hallmark in human aging and disease, such as multiple sclerosis. Our hypothesis is that these diseases might be characterized by altered tissue stiffness and that this has an influence on remyelination potential. Here we investigate tissue stiffness profiles of healthy, aged and disease model mice. Manipulating the tissue stiffness might be another promising approach for new treatments.
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- 2020
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29. Cancer-associated fibroblasts of the prostate promote a compliant and more invasive phenotype in benign prostate epithelial cells
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Gail P. Risbridger, Anna Taubenberger, Mitchell G. Lawrence, Dietmar W. Hutmacher, Elizabeth D. Williams, Angela Jacobi, Anna Jaeschke, Mark Frydenberg, Ian Vela, and Laura J. Bray
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Stromal cell ,Biomedical Engineering ,Bioengineering ,Real-time deformability cytometry (RT-FDC) ,Malignant transformation ,Biomaterials ,Prostate cancer ,Prostate ,Full Length Article ,medicine ,lcsh:QH301-705.5 ,Molecular Biology ,Cancer-associated fibroblasts ,Tissue homeostasis ,lcsh:R5-920 ,Tumor microenvironment ,Cell mechanics ,Cell Biology ,medicine.disease ,medicine.anatomical_structure ,lcsh:Biology (General) ,Tumor progression ,Atomic force microscopy (AFM) ,Cancer research ,Cancer-Associated Fibroblasts ,lcsh:Medicine (General) ,Biotechnology - Abstract
Reciprocal interactions between prostate epithelial cells and their adjacent stromal microenvironment not only are essential for tissue homeostasis but also play a key role in tumor development and progression. Malignant transformation is associated with the formation of a reactive stroma where cancer-associated fibroblasts (CAFs) induce matrix remodeling and thereby provide atypical biochemical and biomechanical signals to epithelial cells. Previous work has been focused on the cellular and molecular phenotype as well as on matrix stiffness and remodeling, providing potential targets for cancer therapeutics. So far, biomechanical changes in CAFs and adjacent epithelial cells of the prostate have not been explored. Here, we compared the mechanical properties of primary prostatic CAFs and patient-matched non-malignant prostate tissue fibroblasts (NPFs) using atomic force microscopy (AFM) and real-time deformability cytometry (RT-FDC). It was found that CAFs exhibit an increased apparent Young's modulus, coinciding with an altered architecture of the cytoskeleton compared with NPFs. In contrast, co-cultures of benign prostate epithelial (BPH-1) cells with CAFs resulted in a decreased stiffness of the epithelial cells, as well as an elongated morphological phenotype, when compared with co-cultures with NPFs. Moreover, the presence of CAFs increased proliferation and invasion of epithelial cells, features typically associated with tumor progression. Altogether, this study provides novel insights into the mechanical interactions between epithelial cells with the malignant prostate microenvironment, which could potentially be explored for new diagnostic approaches., Graphical abstract Image 1, Highlights • Cancer-associated fibroblasts (CAFs) exhibit a highly aligned cytoskeleton and extracellular matrix. • CAFs are stiffer than normal fibroblasts from the prostate. • Benign prostate epithelial cells are more compliant after co-culture with CAFs. • Benign epithelial cells are more invasive and proliferative in presence of CAFs.
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- 2020
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30. Acute but not inherited demyelination in mouse models leads to brain tissue stiffness changes
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Thomas Kurth, Anna Taubenberger, Dominic Eberle, Robin J.M. Franklin, Anna Jagielska, Georgia Fodelianaki, Katrin Wagner, Escolano J, Elke Ulbricht, Jochen Guck, Nicole Träber, Van Vliet Kj, and Stephanie Möllmert
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medicine.anatomical_structure ,Atomic force microscopy ,Multiple sclerosis ,medicine ,Spatial mapping ,Brain tissue ,Grey matter ,Biology ,Remyelination ,Tissue stiffness ,medicine.disease ,Neuroscience ,Ex vivo - Abstract
The alteration or decrease of axonal myelination is an important hallmark of aging and disease. Demyelinated axons are impaired in their function and degenerate over time. Oligodendrocytes, the cells responsible for myelination of axons, are sensitive to mechanical properties of their environment. Growing evidence indicates that mechanical properties of demyelinating lesions are different from the healthy state and thus have the potential to affect myelinating potential of oligodendrocytes. We performed a high-resolution spatial mapping of the mechanical heterogeneity of demyelinating lesions using Atomic Force Microscope enabled indentation. Our results indicate that the stiffness of specific regions of mouse brain tissue is influenced by age and degree of myelination. Here we specifically demonstrate that acute but not inherited demyelination leads to decreased tissue stiffness, which could lower remyelination potential of oligodendrocytes. We also demonstrate that specific brain regions have unique ranges of stiffness in white and grey matter. Our ex vivo findings may help the design of future in vitro models to mimic mechanical environment of the brain in healthy and disease state. Reported here, mechanical properties of demyelinating lesions may facilitate novel approaches in treating demyelinating diseases such as multiple sclerosis.
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- 2018
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31. Spheroid culture of mesenchymal stromal cells results in morpho-rheological properties appropriate for improved microcirculation
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Rebekka Wehner, Manja Wobus, Stefanie Tietze, Berna Kaya, Angela Jacobi, Maik Herbig, Martin Kräter, Anna Taubenberger, Marc Schmitz, Oliver Otto, Catrin List, Martin Bornhäuser, and Jochen Guck
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General Chemical Engineering ,Cell ,General Physics and Astronomy ,Medicine (miscellaneous) ,Biochemistry, Genetics and Molecular Biology (miscellaneous) ,Microcirculation ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,cell mechanics ,microcirculation mimetics ,In vivo ,Biological property ,medicine ,General Materials Science ,030304 developmental biology ,0303 health sciences ,Full Paper ,Chemistry ,Mesenchymal stem cell ,Spheroid ,General Engineering ,Correction ,mesenspheres ,Full Papers ,Cell biology ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,mesenchymal stromal cells ,Cytometry ,Ex vivo ,030217 neurology & neurosurgery - Abstract
Human bone marrow mesenchymal stromal cells (MSCs) have been used in clinical trials for the treatment of systemic inflammatory diseases due to their regenerative and immunomodulatory properties. However, intravenous administration of MSCs is hampered by cell trapping within the pulmonary capillary networks. Here, we hypothesize that traditional twodimensional (2D) plastic-adherent cell expansion fails to result in appropriate morphorheological properties required for cell-circulation. To address this issue, we adapted a novel method to culture MSCs in non-adherent three-dimensional (3D) spheroids (mesenspheres). The biological properties of mesensphere-cultured MSCs remained identical to conventional 2D cultures. Morpho-rheological analyses revealed a smaller size and lower cell stiffness of mesensphere-derived MSCs compared to plastic-adherent MSCs, measured using real-time deformability cytometry (RT-DC) and atomic force microscopy, resulting in an increased ability to pass through micro-constrictions in an ex vivo microcirculation assay. This ability was confirmed in vivo by analysis of cell accumulation in various organ capillary networks after intravenous injection of mesensphere-derived MSCs in mouse. Our findings generally identify cellular morpho-rheological properties as attractive targets to improve microcirculation and specifically suggest mesensphere cultures as a promising approach for optimized MSC-based therapies.
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- 2018
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32. Standardized microgel beads as elastic cell mechanical probes
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Gheorghe Cojoc, Ruchi Goswami, Anna Taubenberger, Felix Reichel, Mirjam Schuermann, Salvatore Girardo, Katrin Wagner, Dominic Mokbel, Angela Jacobi, Maik Herbig, Christoph Herold, Carsten Werner, Nicole Träber, Julian Thiele, Raimund Schluessler, Paul Markus Mueller, Shada Abuhattum, Jochen Guck, and Thomas Heida
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chemistry.chemical_classification ,0303 health sciences ,Materials science ,Optical diffraction ,Microfluidics ,02 engineering and technology ,Polymer ,Nanoindentation ,021001 nanoscience & nanotechnology ,03 medical and health sciences ,chemistry ,Microscopy ,Composite material ,Elasticity (economics) ,0210 nano-technology ,Elastic modulus ,Cytometry ,030304 developmental biology - Abstract
Cell mechanical measurements are gaining increasing interest in biological and biomedical studies. However, there are no standardized calibration particles available that permit the cross-comparison of different measurement techniques operating at different stresses and time-scales. Here we present the rational design, production, and comprehensive characterization of poly-acylamide (PAAm) microgel beads mimicking biological cells. We produced mono-disperse beads at rates of 20 – 60 kHz by means of a microfluidic droplet generator, where the pre-gel composition was adjusted to tune the beads’ elasticity in the range of cell and tissue relevant mechanical properties. We verified bead homogeneity by optical diffraction tomography and Brillouin microscopy. Consistent elastic behavior of microgel beads at different shear rates was confirmed by AFM-enabled nanoindentation and real-time deformability cytometry (RT-DC). The remaining inherent variability in elastic modulus was rationalized using polymer theory and effectively reduced by sorting based on forward-scattering using conventional flow cytometry. Our results show that PAAm microgel beads can be standardized as mechanical probes, to serve not only for validation and calibration of cell mechanical measurements, but also as cell-scale stress sensors.Significance StatementOften vastly different cell mechanical properties are reported even for the same cell type when employing different measurement techniques. This discrepancy shows the urgent need for standardized calibration particles to cross-compare and validate techniques. Microgel beads can serve this purpose, but they have to fulfil specific requirements such as homogeneity, sizes and elasticities in the range of the cells, and they have to provide comparable results independent of the method applied. Here we demonstrate the standardized production of polyacrylamide microgel beads with all the features an elastic cell-mimic should have. These can not only be used as method calibration particles, but can also serve as cell-scale sensors to quantify normal and shear stresses exerted by other cells and inside tissues, enabling many new applications.
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- 2018
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33. A humanized tissue-engineered in vivo model to dissect interactions between human prostate cancer cells and human bone
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Ladan Fazli, Boris Michael Holzapfel, Judith A. Clements, Martine Roudier, Parisa Hesami, Anna Taubenberger, Laure Thibaudeau, Dietmar W. Hutmacher, Laura S. Gregory, and Shirly Sieh
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Male ,Cancer Research ,Pathology ,medicine.medical_specialty ,Bone Neoplasms ,Mice, SCID ,Biology ,Models, Biological ,Immunoenzyme Techniques ,Mice ,Prostate cancer ,Tissue engineering ,Mice, Inbred NOD ,LNCaP ,medicine ,Animals ,Humans ,Cells, Cultured ,Osteoblasts ,Tissue Engineering ,Mesenchymal stem cell ,Prostatic Neoplasms ,Bone metastasis ,X-Ray Microtomography ,General Medicine ,medicine.disease ,Bone morphogenetic protein 7 ,Oncology ,Cancer cell ,Cancer research ,Osteocalcin ,biology.protein - Abstract
Currently used xenograft models for prostate cancer bone metastasis lack the adequate tissue composition necessary to study the interactions between human prostate cancer cells and the human bone microenvironment. We introduce a tissue engineering approach to explore the interactions between human tumor cells and a humanized bone microenvironment. Scaffolds, seeded with human primary osteoblasts in conjunction with BMP7, were implanted into immunodeficient mice to form humanized tissue engineered bone constructs (hTEBCs) which consequently resulted in the generation of highly vascularized and viable humanized bone. At 12 weeks, PC3 and LNCaP cells were injected into the hTEBCs. Seven weeks later the mice were euthanized. Micro-CT, histology, TRAP, PTHrP and osteocalcin staining results reflected the different characteristics of the two cell lines regarding their phenotypic growth pattern within bone. Microvessel density, as assessed by vWF staining, showed that tumor vessel density was significantly higher in LNCaP injected hTEBC implants than in those injected with PC3 cells (p < 0.001). Interestingly, PC3 cells showed morphological features of epithelial and mesenchymal phenotypes suggesting a cellular plasticity within this microenvironment. Taken together, a highly reproducible humanized model was established which is successful in generating LNCaP and PC3 tumors within a complex humanized bone microenvironment. This model simulates the conditions seen clinically more closely than any other model described in the literature to date and hence represents a powerful experimental platform that can be used in future work to investigate specific biological questions relevant to bone metastasis.
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- 2014
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34. A tissue-engineered humanized xenograft model of human breast cancer metastasis to bone
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Parisa Hesami, Dietmar W. Hutmacher, Boris Michael Holzapfel, Carl Power, Paul D. Dalton, Toby D. Brown, Brett G. Hollier, Verena M.C. Quent, Anna Taubenberger, Tobias Fuehrmann, and Laure Thibaudeau
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Osteolysis ,Osteotropism ,Neuroscience (miscellaneous) ,Medicine (miscellaneous) ,lcsh:Medicine ,Bone Neoplasms ,Breast Neoplasms ,Mice, SCID ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Metastasis ,Mice ,Breast cancer ,Immunology and Microbiology (miscellaneous) ,Resource Articles ,Tumor Microenvironment ,lcsh:Pathology ,Medicine ,Animals ,Humans ,Tissue engineering ,ddc:610 ,Tumor microenvironment ,business.industry ,Humanized xenograft model ,lcsh:R ,Bone metastasis ,Reproducibility of Results ,medicine.disease ,medicine.anatomical_structure ,Melt electrospinning ,Cancer cell ,Immunology ,Cancer research ,Heterografts ,Female ,Bone marrow ,business ,Homing (hematopoietic) ,lcsh:RB1-214 - Abstract
The skeleton is a preferred homing site for breast cancer metastasis. To date, treatment options for patients with bone metastases are mostly palliative and the disease is still incurable. Indeed, key mechanisms involved in breast cancer osteotropism are still only partially understood due to the lack of suitable animal models to mimic metastasis of human tumor cells to a human bone microenvironment. In the presented study, we investigate the use of a human tissue-engineered bone construct to develop a humanized xenograft model of breast cancer-induced bone metastasis in a murine host. Primary human osteoblastic cell-seeded melt electrospun scaffolds in combination with recombinant human bone morphogenetic protein 7 were implanted subcutaneously in non-obese diabetic/severe combined immunodeficient mice. The tissue-engineered constructs led to the formation of a morphologically intact ‘organ’ bone incorporating a high amount of mineralized tissue, live osteocytes and bone marrow spaces. The newly formed bone was largely humanized, as indicated by the incorporation of human bone cells and human-derived matrix proteins. After intracardiac injection, the dissemination of luciferase-expressing human breast cancer cell lines to the humanized bone ossicles was detected by bioluminescent imaging. Histological analysis revealed the presence of metastases with clear osteolysis in the newly formed bone. Thus, human tissue-engineered bone constructs can be applied efficiently as a target tissue for human breast cancer cells injected into the blood circulation and replicate the osteolytic phenotype associated with breast cancer-induced bone lesions. In conclusion, we have developed an appropriate model for investigation of species-specific mechanisms of human breast cancer-related bone metastasis in vivo.
- Published
- 2014
35. Single-Cell Mechanical Phenotype is an Intrinsic Marker of Reprogramming and Differentiation along the Neural Lineage
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Paul A. Muller, Anna Taubenberger, Marta Urbanska, Philipp Rosendahl, Katrin Neumann, Konstantinos Anastassiadis, Maria Winzi, Jochen Guck, and Shada Abuhattum
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Lineage (genetic) ,medicine.anatomical_structure ,Cell ,Biophysics ,medicine ,Biology ,Phenotype ,Reprogramming ,Cell biology - Published
- 2018
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36. Hydrogels: 3D Microenvironment Stiffness Regulates Tumor Spheroid Growth and Mechanics via p21 and ROCK (Adv. Biosys. 9/2019)
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Marcus Binner, Katrin Wagner, Salvatore Girardo, Jochen Guck, Isabel Richter, Dominik Hahn, Barbara Haller, Elisabeth Fischer-Friedrich, Carsten Werner, Martin Kräter, Nicole Träber, Thomas Kurth, Anna Taubenberger, and Uwe Freudenberg
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Biomaterials ,Chemistry ,Tumor spheroid ,Self-healing hydrogels ,Biomedical Engineering ,medicine ,Biophysics ,Stiffness ,medicine.symptom ,General Biochemistry, Genetics and Molecular Biology - Published
- 2019
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37. Delineating breast cancer cell interactions with engineered bone microenvironments
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Dietmar W. Hutmacher, Anna Taubenberger, Laure Thibaudeau, Verena M.C. Quent, and Judith A. Clements
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Pathology ,medicine.medical_specialty ,Tumor microenvironment ,biology ,Chemistry ,Endocrinology, Diabetes and Metabolism ,Bone metastasis ,medicine.disease ,Cell biology ,Extracellular matrix ,Tissue culture ,Cell culture ,biology.protein ,medicine ,Extracellular ,Orthopedics and Sports Medicine ,Osteopontin ,skin and connective tissue diseases ,Cell adhesion - Abstract
Free to read The mechanisms leading to colonization of metastatic breast cancer cells (BCa) in the skeleton are still not fully understood. Here, we demonstrate that mineralized extracellular matrices secreted by primary human osteoblasts (hOBM) modulate cellular processes associated with BCa colonization of bone. A panel of four BCa cell lines of different bone-metastatic potential (T47D, SUM1315, MDA-MB-231, and the bone-seeking subline MDA-MB-231BO) was cultured on hOBM. After 3 days, the metastatic BCa cells had undergone morphological changes on hOBM and were aligned along the hOBM's collagen type I fibrils that were decorated with bone-specific proteins. In contrast, nonmetastatic BCa cells showed a random orientation on hOBM. Atomic force microscopy-based single-cell force spectroscopy revealed that the metastatic cell lines adhered more strongly to hOBM compared with nonmetastatic cells. Function-blocking experiments indicated that β1-integrins mediated cell adhesion to hOBM. In addition, metastatic BCa cells migrated directionally and invaded hOBM, which was accompanied by enhanced MMP-2 and -9 secretion. Furthermore, we observed gene expression changes associated with osteomimickry in BCa cultured on hOBM. As such, osteopontin mRNA levels were significantly increased in SUM1315 and MDA-MB-231BO cells in a β1-integrin-dependent manner after growing for 3 days on hOBM compared with tissue culture plastic. In conclusion, our results show that extracellular matrices derived from human osteoblasts represent a powerful experimental platform to dissect mechanisms underlying critical steps in the development of bone metastases.
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- 2013
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38. Humanised xenograft models of bone metastasis revisited: novel insights into species-specific mechanisms of cancer cell osteotropism
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Anna Taubenberger, Dietmar W. Hutmacher, Laure Thibaudeau, Boris Michael Holzapfel, Carl Power, Parisa Hesami, Nina Pauline Holzapfel, Pamela J. Russell, Susanne Mayer-Wagner, and Judith A. Clements
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Metastatic cascade ,Cancer Research ,Xenotransplantation ,medicine.medical_treatment ,Bone metastasis ,Human bone ,Bone Neoplasms ,Biology ,medicine.disease ,Disease Models, Animal ,Mice ,Haematopoiesis ,Species Specificity ,Oncology ,Immunity ,Cancer cell ,Immunology ,Cancer research ,medicine ,Animals ,Heterografts ,Humans ,Human cancer - Abstract
The determinants and key mechanisms of cancer cell osteotropism have not been identified, mainly due to the lack of reproducible animal models representing the biological, genetic and clinical features seen in humans. An ideal model should be capable of recapitulating as many steps of the metastatic cascade as possible, thus facilitating the development of prognostic markers and novel therapeutic strategies. Most animal models of bone metastasis still have to be derived experimentally as most syngeneic and transgeneic approaches do not provide a robust skeletal phenotype and do not recapitulate the biological processes seen in humans. The xenotransplantation of human cancer cells or tumour tissue into immunocompromised murine hosts provides the possibility to simulate early and late stages of the human disease. Human bone or tissue-engineered human bone constructs can be implanted into the animal to recapitulate more subtle, species-specific aspects of the mutual interaction between human cancer cells and the human bone microenvironment. Moreover, the replication of the entire "organ" bone makes it possible to analyse the interaction between cancer cells and the haematopoietic niche and to confer at least a partial human immunity to the murine host. This process of humanisation is facilitated by novel immunocompromised mouse strains that allow a high engraftment rate of human cells or tissue. These humanised xenograft models provide an important research tool to study human biological processes of bone metastasis.
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- 2013
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39. A humanised tissue-engineered bone model allows species-specific breast cancer-related bone metastasis in vivo
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Anna Taubenberger, Johannes Reichert, Judith A. Clements, Verena Quent, Laure Martine, Dietmar W. Hutmacher, and Daniela Loessner
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0301 basic medicine ,Calcium Phosphates ,Scaffold ,Cell Survival ,Polyesters ,Biomedical Engineering ,Medicine (miscellaneous) ,Bone Neoplasms ,Breast Neoplasms ,Nod ,Mice, SCID ,Models, Biological ,Bone and Bones ,Hydrogel, Polyethylene Glycol Dimethacrylate ,Metastasis ,Biomaterials ,03 medical and health sciences ,0302 clinical medicine ,Breast cancer ,Calcification, Physiologic ,Species Specificity ,In vivo ,Cell Line, Tumor ,medicine ,Animals ,Humans ,Neoplasm Invasiveness ,Cell Shape ,Cell Proliferation ,Tissue Engineering ,Tissue Scaffolds ,business.industry ,Cancer ,Bone metastasis ,Organ Size ,X-Ray Microtomography ,medicine.disease ,030104 developmental biology ,030220 oncology & carcinogenesis ,Self-healing hydrogels ,Cancer research ,Female ,business ,Biomedical engineering - Abstract
Bone metastases frequently occur in the advanced stages of breast cancer. At this stage, the disease is deemed incurable. To date, the mechanisms of breast cancer-related metastasis to bone are poorly understood. This may be attributed to the lack of appropriate animal models to investigate the complex cancer cell–bone interactions. In this study, two established tissue-engineered bone constructs (TEBCs) were applied to a breast cancer-related metastasis model. A cylindrical medical-grade polycaprolactone-tricalcium phosphate scaffold produced by fused deposition modelling (scaffold 1) was compared with a tubular calcium phosphate-coated polycaprolactone scaffold fabricated by solution electrospinning (scaffold 2) for their potential to generate ectopic humanised bone in NOD/SCID mice. While scaffold 1 was found not suitable to generate a sufficient amount of ectopic bone tissue due to poor ectopic integration, scaffold 2 showed excellent integration into the host tissue, leading to bone formation. To mimic breast cancer cell colonisation to the bone, MDA-MB-231, SUM1315, and MDA-MB-231BO breast cancer cells were cultured in polyethylene glycol-based hydrogels and implanted adjacent to the TEBCs. Histological analysis indicated that the breast cancer cells induced an osteoclastic reaction in the TEBCs, demonstrating analogies to breast cancer-related bone metastasis seen in patients.
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- 2016
40. Actin stress fiber organization promotes cell stiffening and proliferation of pre-invasive breast cancer cells
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Catarina Brás-Pereira, António Polónia, M. Araujo, Maik Herbig, José B. Pereira-Leal, Anna Taubenberger, Joana Cardoso, Clara Barreto, Oliver Otto, Joana Paredes, André Filipe Vieira, Jochen Guck, Nuno Pimpão Martins, Florence Janody, and Sandra Tavares
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0301 basic medicine ,Male ,Cell ,General Physics and Astronomy ,Datasets as Topic ,0302 clinical medicine ,Cell Movement ,Stress Fibers ,Breast ,Phosphorylation ,RNA, Small Interfering ,Cytoskeleton ,Cancer ,Multidisciplinary ,musculoskeletal system ,Cell biology ,Up-Regulation ,DNA-Binding Proteins ,Gene Expression Regulation, Neoplastic ,medicine.anatomical_structure ,Cell Transformation, Neoplastic ,src-Family Kinases ,030220 oncology & carcinogenesis ,Drosophila ,Female ,musculoskeletal diseases ,Stress fiber ,animal structures ,Science ,Biophysics ,Breast Neoplasms ,Biology ,Time-Lapse Imaging ,General Biochemistry, Genetics and Molecular Biology ,Article ,Cell Line ,03 medical and health sciences ,Downregulation and upregulation ,medicine ,Animals ,Humans ,Actin ,Cell Proliferation ,Cell growth ,Gene Expression Profiling ,General Chemistry ,equipment and supplies ,Actins ,030104 developmental biology ,Cell culture ,Tissue Array Analysis ,Cancer cell ,Cell Adhesion Molecules - Abstract
Studies of the role of actin in tumour progression have highlighted its key contribution in cell softening associated with cell invasion. Here, using a human breast cell line with conditional Src induction, we demonstrate that cells undergo a stiffening state prior to acquiring malignant features. This state is characterized by the transient accumulation of stress fibres and upregulation of Ena/VASP-like (EVL). EVL, in turn, organizes stress fibres leading to transient cell stiffening, ERK-dependent cell proliferation, as well as enhancement of Src activation and progression towards a fully transformed state. Accordingly, EVL accumulates predominantly in premalignant breast lesions and is required for Src-induced epithelial overgrowth in Drosophila. While cell softening allows for cancer cell invasion, our work reveals that stress fibre-mediated cell stiffening could drive tumour growth during premalignant stages. A careful consideration of the mechanical properties of tumour cells could therefore offer new avenues of exploration when designing cancer-targeting therapies., When cells acquire a malignant phenotype they become less stiff and this helps migration and invasion favouring metastasis. Here the authors show that Src-driven cell transformation and transition to a less stiff state follows an event of membrane stiffening due to stress fibres accumulation.
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- 2016
41. A Nanoprinted Model of Interstitial Cancer Migration Reveals a Link between Cell Deformability and Proliferation
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Martin Bergert, Anna Taubenberger, Aldo Ferrari, Jochen Guck, Magdalini Panagiotakopoulou, and Dimos Poulikakos
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0301 basic medicine ,Dense connective tissue ,Cell ,General Physics and Astronomy ,Mitosis ,Biology ,03 medical and health sciences ,Invasion process ,Cell Movement ,Interstitial tissue ,Cell Line, Tumor ,medicine ,Humans ,Nanotechnology ,General Materials Science ,Neoplasm Metastasis ,Cell shape ,Cell Proliferation ,Cell Nucleus ,Mesenchymal stem cell ,Cell Cycle ,General Engineering ,Cell cycle ,Chromatin ,Cell biology ,030104 developmental biology ,medicine.anatomical_structure ,Printing, Three-Dimensional - Abstract
Metastatic progression of tumors requires the coordinated dissemination of cancerous cells through interstitial tissues and their replication in distant body locations. Despite their importance in cancer treatment decisions, key factors, such as cell shape adaptation and the role it plays in dense tissue invasion by cancerous cells, are not well understood. Here, we employ a 3D electrohydrodynamic nanoprinting technology to generate vertical arrays of topographical pores that mimic interstitial tissue resistance to the mesenchymal migration of cancerous cells, in order to determine the effect of nuclear size, cell deformability, and cell-to-substrate adhesion on tissue invasion efficiency. The high spatial and temporal resolution of our analysis demonstrates that the ability of cells to deform depends on the cell cycle phase, peaks immediately after mitosis, and is key to the invasion process. Increased pore penetration efficiency by cells in early G1 phase also coincided with their lower nuclear volume and higher cell deformability, compared with the later cell cycle stages. Furthermore, artificial decondensation of chromatin induced an increase in cell and nuclear deformability and improved pore penetration efficiency of cells in G1. Together, these results underline that along the cell cycle cells have different abilities to dynamically remodel their actin cytoskeleton and induce nuclear shape changes, which determines their pore penetration efficiency. Thus, our results support a mechanism in which cell proliferation and pore penetration are functionally linked to favor the interstitial dissemination of metastatic cells.
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- 2016
42. A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy
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Titus M. Franzmann, Jochen Guck, Elke Ulbricht, Anna Taubenberger, Shovamayee Maharana, Matthias C. Munder, Oliver Otto, Simon Alberti, Maik Herbig, Paul Müller, Doris Richter, Vasily Zaburdaev, Elisabeth Nüske, Daniel Midtvedt, and Liliana Malinovska
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0301 basic medicine ,Cytoplasm ,dormancy ,food.ingredient ,QH301-705.5 ,Cell Survival ,cytosolic pH ,Science ,Cell ,Saccharomyces cerevisiae ,Phase Transition ,General Biochemistry, Genetics and Molecular Biology ,Amoeba (genus) ,macromolecular assembly ,S. cerevisiae ,03 medical and health sciences ,0302 clinical medicine ,food ,Stress, Physiological ,medicine ,Dictyostelium ,Biology (General) ,General Immunology and Microbiology ,biology ,General Neuroscience ,starvation ,Cell Biology ,General Medicine ,Hydrogen-Ion Concentration ,Biophysics and Structural Biology ,biology.organism_classification ,Yeast ,Living matter ,Cell biology ,Macromolecular assembly ,030104 developmental biology ,medicine.anatomical_structure ,S. pombe ,Structural biology ,Biochemistry ,Medicine ,Dormancy ,metabolism ,030217 neurology & neurosurgery ,Research Article - Abstract
Cells can enter into a dormant state when faced with unfavorable conditions. However, how cells enter into and recover from this state is still poorly understood. Here, we study dormancy in different eukaryotic organisms and find it to be associated with a significant decrease in the mobility of organelles and foreign tracer particles. We show that this reduced mobility is caused by an influx of protons and a marked acidification of the cytoplasm, which leads to widespread macromolecular assembly of proteins and triggers a transition of the cytoplasm to a solid-like state with increased mechanical stability. We further demonstrate that this transition is required for cellular survival under conditions of starvation. Our findings have broad implications for understanding alternative physiological states, such as quiescence and dormancy, and create a new view of the cytoplasm as an adaptable fluid that can reversibly transition into a protective solid-like state. DOI: http://dx.doi.org/10.7554/eLife.09347.001, eLife digest Most organisms live in unpredictable environments, which can often lead to nutrient shortages and other conditions that limit their ability to grow. To survive in these harsh conditions, many organisms adopt a dormant state in which their metabolism slows down to conserve vital energy. When the environmental conditions improve, the organisms can return to their normal state and continue to grow. The interior of cells is known as the cytoplasm. It is very crowded and contains many molecules and compartments called organelles that carry out a variety of vital processes. The cytoplasm has long been considered to be fluid-like in nature, but recent evidence suggests that in bacterial cells it can solidify to resemble a soft glass-type material under certain conditions. When cells become dormant they stop dividing and reorganise their cytoplasm in several ways; for example, the water content drops and many essential proteins form storage compartments. However, it was not clear how cells regulate the structure of the cytoplasm to enter into or exit from dormancy. Now, Munder et al. analyse the changes that occur in the cytoplasm when baker’s yeast cells enter a dormant state. The experiments show that when yeast cells are deprived of energy – as happens during dormancy – the cytoplasm becomes more acidic than normal. This limits the ability of molecules and organelles to move around the cytoplasm. Similar results were also seen in other types of fungi and an amoeba. Munder et al. found that this increase in acidity during dormancy causes many proteins to interact with each other and form large clumps or filament structures that result in the cytoplasm becoming stiffer. A separate study by Joyner et al. found that when yeast cells are starved of sugar, two large molecules are less able to move around the cell interior. Together, the findings of the studies suggest that the interior of cells can undergo a transition from a fluid-like to a more solid-like state to protect the cells from damage when energy is in short supply. The next challenge is to understand the molecular mechanisms that cause the physical properties of the cytoplasm to change under different conditions. DOI: http://dx.doi.org/10.7554/eLife.09347.002
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- 2016
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43. BCR/ABL Expression of Myeloid Progenitors Increases β1-Integrin Mediated Adhesion to Stromal Cells
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Fernando A. Fierro, Martin Bornhäuser, Thomas Illmer, Gerhard Ehninger, Daniel J. Müller, Pierre-Henri Puech, and Anna Taubenberger
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Time Factors ,Stromal cell ,Integrin ,Cell Culture Techniques ,Fusion Proteins, bcr-abl ,Antineoplastic Agents ,Transfection ,Collagen Type I ,Piperazines ,Mice ,Structural Biology ,hemic and lymphatic diseases ,Cell Adhesion ,Animals ,Cell adhesion ,neoplasms ,Molecular Biology ,Cells, Cultured ,Myeloid Progenitor Cells ,ABL ,biology ,Integrin beta1 ,breakpoint cluster region ,Fibronectins ,Pyrimidines ,Imatinib mesylate ,Benzamides ,Imatinib Mesylate ,Cancer research ,biology.protein ,Stromal Cells ,Tyrosine kinase ,K562 cells - Abstract
The expression of the fusion protein BCR/ABL is a hallmark of chronic myeloid leukemia. BCR/ABL is a constitutively active tyrosine kinase influencing cell proliferation, apoptosis, and differentiation. To what extent and by which mechanism BCR/ABL affects the adhesion of leukemic cells to bone marrow stromal cells (BMSC) is controversial. To characterize adhesion of BCR/ABL-transformed 32D cells (32D-BCR/ABL) to the BMSC line M2-10B4, we used washing assays and single-cell force spectroscopy (SCFS). Compared to control 32D cells (32D-V), 32D-BCR/ABL developed threefold higher adhesion forces. This enhanced cell adhesion could be reduced to control levels after specifically inhibiting the activity of the tyrosine kinase BCR/ABL using imatinib mesylate (IM). SCFS showed that the adhesion forces of 32D-BCR/ABL were strongest to fibronectin and collagen type I, suggesting that beta1-integrin has a major role in mediating the adhesion of leukemic cells to BMSC. Indeed, the beta1-integrin blocking antibody Ha2/5 abrogated the attachment of 32D-V and 32D-BCR/ABL cells to BMSC. Although 32D-BCR/ABL cells show significantly increased beta1-integrin expression, no significant difference of beta1-integrin mRNA levels could be detected, indicating a post-transcriptional regulation of beta1-comprising integrin heterodimers by BCR/ABL. The data presented here argue that the interaction of beta1-integrin and extracellular matrix components is functionally important in leukemic cells expressing high-levels of BCR/ABL, and could provide a rationale for the development of optimized targeted therapies.
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- 2008
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44. Cellular Remodelling of Individual Collagen Fibrils Visualized by Time-lapse AFM
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Anna Taubenberger, Daniel J. Müller, Jens Friedrichs, and Clemens M. Franz
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Materials science ,Fibrillar Collagens ,Integrin ,CHO Cells ,macromolecular substances ,Microscopy, Atomic Force ,Fibril ,Collagen Type I ,Extracellular matrix ,Matrix (mathematics) ,Cricetulus ,Cell Movement ,Structural Biology ,Cell Line, Tumor ,Cricetinae ,Tensile Strength ,Ultimate tensile strength ,Cell polarity ,Cell Adhesion ,medicine ,Animals ,Humans ,Pseudopodia ,Molecular Biology ,biology ,Cell Membrane ,Cell Polarity ,Extracellular Matrix ,Tendon ,Crystallography ,medicine.anatomical_structure ,Cell culture ,biology.protein ,Biophysics ,Integrin alpha2beta1 - Abstract
The extracellular matrix in tissues such as bone, tendon and cornea contains ordered, parallel arrays of collagen type I fibrils. Cells embedded in these matrices frequently co-align with the collagen fibrils, suggesting that ordered fibrils provide structural or signalling cues for cell polarization. To study mechanisms of matrix-induced cell alignment, we used nanoscopically defined two-dimensional matrices assembled of highly aligned collagen type I fibrils. On these matrices, different cell lines expressing integrin alpha(2)beta(1) polarized strongly in the fibril direction. In contrast, alpha(2)beta(1)-deficient cells adhered but polarized less well, suggesting a role of integrin alpha(2)beta(1) in the alignment process. Time-lapse atomic force microscopy (AFM) demonstrated that during alignment cells deform the matrix by reorienting individual collagen fibrils. Cells deformed the collagen matrix asymmetrically, revealing an anisotropy in matrix rigidity. When matrix rigidity was rendered uniform by chemical cross-linking or when the matrix was formed from collagen fibrils of reduced tensile strength, cell polarization was prevented. This suggested that both the high tensile strength and pliability of collagen fibrils contribute to the anisotropic rigidity of the matrix, leading to directional cellular traction and cell polarization. During alignment, cellular protrusions contacted the collagen matrix from below and above. This complex entanglement of cellular protrusions and collagen fibrils may further promote cell alignment by maximizing cellular traction.
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- 2007
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45. Revealing Early Steps of α2β1Integrin-mediated Adhesion to Collagen Type I by Using Single-Cell Force Spectroscopy
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Anna Taubenberger, Pierre-Henri Puech, David A. Cisneros, Jens Friedrichs, Daniel J. Müller, and Clemens M. Franz
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Pyridines ,Cell ,CHO Cells ,Protein Serine-Threonine Kinases ,Biology ,Microscopy, Atomic Force ,Transfection ,Collagen Type I ,Focal adhesion ,Cricetulus ,Cricetinae ,Cell Adhesion ,medicine ,Animals ,Humans ,Enzyme Inhibitors ,Cell adhesion ,Molecular Biology ,Focal Adhesions ,rho-Associated Kinases ,Binding Sites ,Chinese hamster ovary cell ,Intracellular Signaling Peptides and Proteins ,Force spectroscopy ,Actomyosin ,Articles ,Cell Biology ,Adhesion ,Amides ,Recombinant Proteins ,Biomechanical Phenomena ,Cell biology ,medicine.anatomical_structure ,Structural biology ,Integrin alpha2beta1 - Abstract
We have characterized early steps of α2β1integrin-mediated cell adhesion to a collagen type I matrix by using single-cell force spectroscopy. In agreement with the role of α2β1as a collagen type I receptor, α2β1-expressing Chinese hamster ovary (CHO)-A2 cells spread rapidly on the matrix, whereas α2β1-negative CHO wild-type cells adhered poorly. Probing CHO-A2 cell detachment forces over a contact time range of 600 s revealed a nonlinear adhesion response. During the first 60 s, cell adhesion increased slowly, and forces associated with the smallest rupture events were consistent with the breakage of individual integrin–collagen bonds. Above 60 s, a fraction of cells rapidly switched into an activated adhesion state marked by up to 10-fold increased detachment forces. Elevated overall cell adhesion coincided with a rise of the smallest rupture forces above the value required to break a single-integrin–collagen bond, suggesting a change from single to cooperative receptor binding. Transition into the activated adhesion mode and the increase of the smallest rupture forces were both blocked by inhibitors of actomyosin contractility. We therefore propose a two-step mechanism for the establishment of α2β1-mediated adhesion as weak initial, single-integrin–mediated binding events are superseded by strong adhesive interactions involving receptor cooperativity and actomyosin contractility.
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- 2007
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46. Extracting Cell Stiffness from Real-Time Deformability Cytometry: Theory and Experiment
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Elisabeth Fischer-Friedrich, Anna Taubenberger, Stefan Golfier, Jochen Guck, Salvatore Girardo, Philipp Rosendahl, Alexander Mietke, Sebastian Aland, Elke Ulbricht, and Oliver Otto
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Channel (digital image) ,Cell ,Microfluidics ,Biophysics ,Nanotechnology ,Cell Separation ,Cell Line, Tumor ,medicine ,Humans ,Elasticity (economics) ,Cell Shape ,Chemistry ,New and Notable ,Large cell ,Linear elasticity ,technology, industry, and agriculture ,Models, Theoretical ,Elasticity ,3. Good health ,Living matter ,medicine.anatomical_structure ,Cell Biophysics ,Stress, Mechanical ,Biological system ,Shear flow ,Cytometry - Abstract
Cell stiffness is a sensitive indicator of physiological and pathological changes in cells, with many potential applications in biology and medicine. A new method, real-time deformability cytometry, probes cell stiffness at high throughput by exposing cells to a shear flow in a microfluidic channel, allowing for mechanical phenotyping based on single-cell deformability. However, observed deformations of cells in the channel not only are determined by cell stiffness, but also depend on cell size relative to channel size. Here, we disentangle mutual contributions of cell size and cell stiffness to cell deformation by a theoretical analysis in terms of hydrodynamics and linear elasticity theory. Performing real-time deformability cytometry experiments on both model spheres of known elasticity and biological cells, we demonstrate that our analytical model not only predicts deformed shapes inside the channel but also allows for quantification of cell mechanical parameters. Thereby, fast and quantitative mechanical sampling of large cell populations becomes feasible.
- Published
- 2015
47. Author response: A pH-driven transition of the cytoplasm from a fluid- to a solid-like state promotes entry into dormancy
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Elke Ulbricht, Jochen Guck, Matthias C. Munder, Liliana Malinovska, Maik Herbig, Doris Richter, Titus M. Franzmann, Oliver Otto, Daniel Midtvedt, Anna Taubenberger, Paul Müller, Shovamayee Maharana, Simon Alberti, Elisabeth Nüske, and Vasily Zaburdaev
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Transition (genetics) ,Cytoplasm ,Chemistry ,Biophysics ,Dormancy ,Solid like - Published
- 2015
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48. New mechanistic insights of integrin β1 in breast cancer bone colonization
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Christina Theodoropoulos, Boris Michael Holzapfel, Melanie Straub, Anna Taubenberger, Laure Thibaudeau, Olivier Ramuz, and Dietmar W. Hutmacher
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ddc:616 ,Pathology ,medicine.medical_specialty ,Integrin ,Bone metastasis ,Biology ,medicine.disease ,Bone resorption ,Extracellular matrix ,Breast cancer ,medicine.anatomical_structure ,Oncology ,Cancer cell ,Cancer research ,medicine ,biology.protein ,Bone marrow ,Ex vivo - Abstract
Bone metastasis is a frequent and life-threatening complication of breast cancer. The molecular mechanisms supporting the establishment of breast cancer cells in the skeleton are still not fully understood, which may be attributed to the lack of suitable models that interrogate interactions between human breast cancer cells and the bone microenvironment. Although it is well-known that integrins mediate adhesion of malignant cells to bone extracellular matrix, their role during bone colonization remains unclear. Here, the role of β1 integrins in bone colonization was investigated using tissue-engineered humanized in vitro and in vivo bone models. In vitro, bone-metastatic breast cancer cells with suppressed integrin β1 expression showed reduced attachment, spreading, and migration within human bone matrix compared to control cells. Cell proliferation in vitro was not affected by β1 integrin knockdown, yet tumor growth in vivo within humanized bone microenvironments was significantly inhibited upon β1 integrin suppression, as revealed by quantitative in/ex vivo fluorescence imaging and histological analysis. Tumor cells invaded bone marrow spaces in the humanized bone and formed osteolytic lesions; osteoclastic bone resorption was, however, not reduced by β1 integrin knockdown. Taken together, we demonstrate that β1 integrins have a pivotal role in bone colonization using unique tissue-engineered humanized bone models.
- Published
- 2015
49. Composite Magnetic Particles as Carriers for Laccase fromTrametes versicolor
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Ulrike Böhmer, Thomas Bley, Andrij Pich, Tobias Wage, Hans-Juergen P. Adler, Zheng Li, Sanchita Bhattacharya, Karl-Heinz van Pée, and Anna Taubenberger
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Polymers and Plastics ,Immobilized enzyme ,Maghemite ,Bioengineering ,engineering.material ,Biomaterials ,Magnetics ,chemistry.chemical_compound ,Colloid ,Enzyme Stability ,Materials Chemistry ,Organic chemistry ,Particle Size ,Trametes versicolor ,Laccase ,biology ,Chemistry ,Basidiomycota ,biology.organism_classification ,Chemical engineering ,Microscopy, Electron, Scanning ,engineering ,Magnetic nanoparticles ,Particle ,Spectrophotometry, Ultraviolet ,Polystyrene ,Biotechnology - Abstract
In this paper we report a study of laccase immobilisation on different kinds of carrier particles. The immobilisation of enzyme on the particle surface with respect to the immobilisation efficiency and the properties of the immobilised enzymes is discussed. The immobilisation of laccase on polystyrene particles bearing reactive beta-diketone groups is characterised by high efficiency, but grafting of the enzyme increases the stability of the colloidal system, which makes the separation/purification procedure difficult. Additionally, the extreme colloidal stability of the immobilisates hinders the application of such particles with immobilised enzymes in some applications where the recycling of the enzyme should be performed. It has been found that hybrid PS-AAEM particles equipped with maghemite show similar immobilisation efficiency to that of their analogues without maghemite and can additionally be manipulated in magnetic fields. The activity of the immobilised laccase is much higher in the pH region 5-7 and the temperature range 50-70 degrees C as compared with that of the free enzyme. Immobilised enzymes also exhibit much better storage stability.
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- 2006
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50. Measuring cell adhesion forces of primary gastrulating cells from zebrafish using atomic force microscopy
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Carl-Philipp Heisenberg, Florian Ulrich, Pierre-Henri Puech, Anna Taubenberger, Michael Krieg, and Daniel J. Müller
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animal structures ,Extracellular matrix component ,Integrin ,Mesenchymal Stem Cells ,Gastrula ,Cell Biology ,Germ layer ,Zebrafish Proteins ,Biology ,Microscopy, Atomic Force ,biology.organism_classification ,Cell morphology ,Fibronectins ,Cell biology ,Wnt Proteins ,Fibronectin ,embryonic structures ,Cell Adhesion ,biology.protein ,Animals ,Progenitor cell ,Cell adhesion ,Zebrafish ,Cells, Cultured - Abstract
During vertebrate gastrulation, progenitor cells of different germ layers acquire specific adhesive properties that contribute to germ layer formation and separation. Wnt signals have been suggested to function in this process by modulating the different levels of adhesion between the germ layers, however, direct evidence for this is still lacking. Here we show that Wnt11, a key signal regulating gastrulation movements, is needed for the adhesion of zebrafish mesendodermal progenitor cells to fibronectin, an abundant extracellular matrix component during gastrulation. To measure this effect, we developed an assay to quantify the adhesion of single zebrafish primary mesendodermal progenitors using atomic-force microscopy (AFM). We observed significant differences in detachment force and work between cultured mesendodermal progenitors from wild-type embryos and from slb/wnt11 mutant embryos, which carry a loss-of-function mutation in the wnt11 gene, when tested on fibronectin-coated substrates. These differences were probably due to reduced adhesion to the fibronectin substrate as neither the overall cell morphology nor the cell elasticity grossly differed between wild-type and mutant cells. Furthermore, in the presence of inhibitors of fibronectin-integrin binding, such as RGD peptides, the adhesion force and work were strongly decreased, indicating that integrins are involved in the binding of mesendodermal progenitors in our assay. These findings demonstrate that AFM can be used to quantitatively determine the substrate-adhesion of cultured primary gastrulating cells and provide insight into the role of Wnt11 signalling in modulating cell adhesion at the single cell scale.
- Published
- 2005
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