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To understand energy and material cycles on surface Earth, it is important yet challenging to estimate trophic transfer through ecosystems. To address this issue, the integrated trophic position (iTP), defined as a biomass-weighted average TP of a given food web, is useful because the iTP can be a proxy for the configuration of ecological pyramid. Here we conducted the compound-specific nitrogen isotope analysis of amino acids for macroinvertebrate communities collected from the Ado and Yasu Rivers in the Lake Biwa watershed, Japan, to estimate their iTP values. Unlike previous studies, no clear relationships between iTP and biodiversity (Shannon index H') were found. However, by comparing the irrigated period and the non-irrigated period within the Yasu River, the decrease in iTP values was fairly characterized by the increase in H'. A significant difference in the observed iTP values compared to those reported in the previous study suggests that the configuration of ecological pyramid in stream ecosystems is dynamic rather than static. We also found that the iTP values of stream macroinvertebrate communities (2.37 ± 0.24) (n = 43), marine mesozooplankton communities (2.33 ± 0.34) (n = 14), and animal communities with various taxonomic groups (2.42 ± 0.21) (n = 158) are all comparable with each other, suggesting that partial communities involving macroinvertebrates well represent the configuration of total ecological pyramid. This finding clearly delineates the promising performance of the iTP index for the trophic transfer of energy, which should be further explored in a variety of ecosystems. [ABSTRACT FROM AUTHOR]

The article titled "Resolution of Respect: James A. MacMahon (1939–2024)" from the Bulletin of the Ecological Society of America pays tribute to the late Professor James A. MacMahon, highlighting his significant contributions to the field of ecology and the Ecological Society of America. Professor MacMahon's scientific career spanned over 71 years, during which he mentored numerous students, published extensively, and conducted research on a wide range of ecological topics. His work focused on disturbance ecology, succession, and ecosystem restoration, with a particular emphasis on animal-related disturbances and volcanic eruptions. Additionally, the article provides insights into Professor MacMahon's personal history, academic achievements, and his commitment to social justice and equality. [Extracted from the article]

Studying the microbial communities within the gastrointestinal tract of vertebrate species can provide insights into biodiversity, disease ecology, and conservation. Currently, we have very limited understanding of the composition of endogenous microbiota in wildlife, particularly in high biodiversity tropical areas. Knowledge is limited by the logistical and ethical challenges of obtaining samples for free-living animals. Roadkill carcasses offer a largely untapped source for biological material, including endogenous gut microbiota. These animals that have died on roads due to collisions with vehicles are suitable for accessible, opportunistic sampling. Here, we used metabarcoding for the V3—V4 region of the 16S rRNA gene in gut samples of nine roadkill samples collected from a road in Ecuador representing two vertebrate species: the speckled worm lizard (Amphisbaena bassleri) and the smooth-billed ani (Crotophaga ani). We successfully identify microbial phyla in both samples including Firmicutes, Bacteroidetes, and Proteobacteria for A. bassleri, and Firmicutes and Actinobacteria for C. ani. Our study provides the first description of the gut microbiota for these two vertebrates, and demonstrates the feasibility of studying endogenous microbial communities from roadkill material that can be opportunistically collected and preserved in biobanks. [ABSTRACT FROM AUTHOR]

Animal shelters address animal welfare in communities through the intake and outcome of companion animals, but these efforts affect population dynamics of companion animals based on the distance animals are moved and the factors that underlie intake and outcome. Using data from an animal shelter in Washington, DC we analyzed cat intakes and outcomes based on geographic and socioeconomic factors. Most intakes were stray cats (59%) and cats relinquished by owners (38%) and most outcomes were adoptions (84%). The highest number of intakes were in high development, low-income neighborhoods, whereas the lowest number of intakes were in low development, high-income neighborhoods. The highest number of outcomes were to high-income neighborhoods and there was a trend toward more outcomes in neighborhoods further from the shelter. Cats returned to the shelter were more likely to originate from areas near the shelter whereas cats that were relinquished originated from areas further from the shelter. Stray intakes were less common, and returns to shelter were more common, in high-income, high development areas. Seized cats originated from low-income neighborhoods. Relative to adoptions, the proportion of returned to owner outcomes was higher in low-income neighborhoods that were closer to the shelter as well as high-income neighborhoods that were distant from the shelter. Our results highlight the factors underlying cat intakes and outcomes in shelters that ultimately determine where, when, and how animals are moved across one urban area; these factors must be considered when developing cat population management plans to reach animal welfare and societal goals. [ABSTRACT FROM AUTHOR]

The forest canopy is populated by diverse communities of invertebrate animals, some of which are traditionally regarded as soil-dwellers. This phenomenon has been revealed for Oribatida and Collembola, but information about the diversity and distribution of free-living nematodes on tree bark and in epiphytes remains limited and fragmentary. In this study, we used DNA metabarcoding to assess diversity patterns of free-living nematodes in the canopy and compared them with soil communities in a boreal, temperate, and tropical monsoon forest. Our results indicate that compared to soil communities, arboreal nematodes exhibit strongly reduced alpha diversity, but increased beta diversity, while the total number of nematode OTUs is comparable in soil and the forest canopy. Considering the low taxonomic similarity (23–29%) between nematode communities in the soil and canopy, it is evident that arboreal habitats contribute significantly to the overall diversity of nematodes in forest ecosystems. In contrast to the soil nematode communities, there was no latitudinal diversity gradient in the canopy of the studied forests. Moreover, there was no decrease in the nematode OTU diversity with height, indicating that arboreal communities of nematodes and microarthropods are controlled by different mechanisms. [ABSTRACT FROM AUTHOR]

Simple Summary: A non-native species, the Oriental Magpie (Pica serica) has established a population in a restricted area of southern Hokkaido, northern Japan, since the 1990s. To clarify the current number and distribution of the population and their major determinants, we conducted intensive field surveys six times during the course of a year from May 2012 in Tomakomai City, the central area of the current distribution. We found 181 to 248 magpies in every survey, and 46 active nests in May. Most of the magpies appeared in residential areas, avoiding commercial and industrial areas. The magpies foraged mainly in short grasslands in public spaces, such as parks, in May and July, and most of the birds preferred house gardens for foraging from November to March. Dogs or cats were often kept outside in the gardens where the magpies foraged, and observations of the magpies stealing pet food were common. It is likely that the magpies rely on anthropogenic food resources such as pet food, especially in winter. This study provides a basis for further monitoring of this non-native magpie species that has invaded urban/suburban habitats in Hokkaido, Japan. As magpies and their nests are easy to find, citizen science could contribute to such monitoring. Non-native species have caused various problems for both animal and human communities globally, but their monitoring during the early stages of establishment is often difficult. A population of the Oriental Magpie (Pica serica) has established on Hokkaido Island, northern Japan, since the 1990s, offering a rare opportunity for field biologists to monitor the entire history of a colonizing avian population. To clarify the current number and distribution of the population and their major determinants, we conducted bimonthly surveys from May 2012 to March 2013, over a total of 417 h, in Tomakomai City, the central area of the current distribution. We found 181 to 248 magpies in every survey, and 46 active nests in May. Most of the magpies appeared in residential areas, avoiding commercial and industrial areas, and did not show seasonal changes in their distribution pattern. The magpies mainly foraged in short grasslands in public spaces, such as parks, in May and July, but most of the birds preferred house gardens for foraging from November to March. Dogs or cats were often kept outside in the gardens where the magpies foraged, and observations of magpies stealing and hoarding pet food were common. It is likely that the magpies rely on anthropogenic food resources such as pet food, especially in winter. Continuous monitoring of this population will enable further knowledge of the factors that limit the number and range of not only non-native species but also avian populations in general to be obtained. [ABSTRACT FROM AUTHOR]

Understanding how ecological communities assemble in relation to natural and human‐induced environmental changes is critical, particularly for communities of pollinators that deliver essential ecosystem services. Despite widespread attention to interactions between functional traits and community responses to environmental changes, the importance of sensory traits has received little attention. To address this, we asked whether visual traits of bumblebee communities varied at large geographical scales along a habitat gradient of increased tree cover. Because trees generate challenging light conditions for flying insects, in particular a reduced light intensity, we hypothesised that differences in tree cover would correlate with shifts in the visual and taxonomical composition of bumblebee communities. We quantified 11 visual traits across 36 specimens from 20 species of bumblebees using micro‐CT and optical modelling of compound eyes and ocelli, and investigated how these traits scale with body size. Using an inventory of bumblebee communities across Sweden and our visual trait dataset, we then explored how visual traits (both absolute and relative to body size) differed in relation to tree cover. We found positive shifts of the community weighted means of visual traits along the increasingly forested habitat gradient (facet diameter, inter‐ommatidial angle, eye parameter of the compound eye and alignment of the three ocelli) that were consistent regardless of body size, while other traits decreased when more forest was present in the landscape (facet number). These functional patterns were associated with differences in the abundance of six common species that likely explains the community‐wide shift of visual traits along the habitat gradient. Our study demonstrates the interaction between vision, habitat and community assembly in bumblebees, while highlighting a promising research topic at the interface between sensory biology and landscape ecology. [ABSTRACT FROM AUTHOR]

The fluctuating environment of arid lands drives spatial and temporal variation in resource availability and habitat suitability for animals. Patches of vegetative growth may create refuges that allow populations to persist when resources are scarce. Yet the links between fine-scale spatial variation and animal abundance are not well known. Here, we examine whether spatial variation in habitat and microhabitat create spatial mosaics in animal abundance. We surveyed ground-dwelling vertebrates and invertebrates in two adjacent habitats in semiarid Australia (cracking clay floodplains and rocky gibber), and across variation in microhabitat (vegetation cover). There was considerable variation in vegetation cover, creating fine-scale spatial mosaics of microhabitats. However, animal community composition did not vary significantly across the two main habitats. At the microhabitat level, numbers of spiders and reptiles were positively associated with woody vegetation cover. Vegetation cover did not significantly impact other taxonomic groups or overall community composition. The results show that response to microhabitats by animal populations is taxon-specific. Woody shrubs may provide a more reliable or more detectable microhabitat refuge compared to grasses for particular taxa. Informed wildlife conservation in arid lands requires investigating taxon-specific habitat and microhabitat associations, as well as the scale and persistence of these associations. Successful management of animal communities depends on understanding what features of the environment allow populations to persist. We examined spatial mosaics of animal communities in semiarid Australia and found that spiders and lizards were more abundant where cover of woody vegetation was relatively high, but other taxa were not linked to vegetation cover. Thus, preserving woody vegetation is important for conserving some taxa. Environmental features important for other taxa need to be identified for management consideration. Photograph by L. Schwanz. [ABSTRACT FROM AUTHOR]

Predators regulate communities through top‐down control in many ecosystems. Because most studies of top‐down control last less than a year and focus on only a subset of the community, they may miss predator effects that manifest at longer timescales or across whole food webs. In southeastern US salt marshes, short‐term and small‐scale experiments indicate that nektonic predators (e.g., blue crab, fish, terrapins) facilitate the foundational grass, Spartina alterniflora, by consuming herbivorous snails and crabs. To test both how nekton affect marsh processes when the entire animal community is present, and how prior results scale over time, we conducted a 3‐year nekton exclusion experiment in a Georgia salt marsh using replicated 19.6 m2 plots. Our nekton exclusions increased densities of plant‐grazing snails and juvenile deposit‐feeding fiddler crab and, in Year 2, reduced predation on tethered juvenile snails, indicating that nektonic predators control these key macroinvertebrates. However, in Year 3, densities of mesopredatory benthic mud crabs increased threefold in nekton exclusions, erasing the tethered snails' predation refuge. Nekton exclusion had no effect on Spartina biomass, likely because the observed mesopredator release suppressed grazing snail densities and elevated densities of fiddler crabs, whose burrowing alleviates soil stresses. Structural equation modeling supported the hypotheses that nektonic predators and mesopredators control invertebrate communities, with nektonic predators having stronger total effects on Spartina than mud crabs by controlling densities of species that both suppress (grazers) and facilitate (fiddler crabs) plant growth. These findings highlight that salt marshes can be resilient to multiyear reductions in nektonic predators if mesopredators are present and that multiple pathways of trophic control manifest in different ways over time to mediate community dynamics. These results highlight that larger scale and longer‐term experiments can illuminate community dynamics not previously understood, even in well‐studied ecosystems such as salt marshes. [ABSTRACT FROM AUTHOR]

Urbanization profoundly impacts biodiversity and ecosystem function, exerting an immense ecological filter on the flora and fauna that inhabit it, oftentimes leading to simplistic and homogenous ecological communities. However, the response of soil animal communities to urbanization remains underexplored, and it is unknown whether their response to urbanization is like that of aboveground organisms. This study investigated the influence of urbanization on soil animal communities in 40 public parks along an urbanization gradient. We evaluated soil animal abundance, diversity, and community composition and related these measures to urban and soil characteristics at each park. The most urbanized parks exhibited reduced animal abundance, richness, and Shannon diversity. These changes were influenced by many variables underscoring the multifaceted influence of urbanization on ecological communities. Notably, contrary to our expectation, urbanization did not lead to community homogenization; instead, it acted stochastically, creating unique soil animal assemblages. This suggests that urban soil animal communities are concomitantly shaped by deterministic and stochastic ecological processes in urban areas. Our study highlights the intricate interplay between urbanization and soil animal ecology, challenging the notion of urban homogenization in belowground ecosystems and providing insight for managing and preserving belowground communities in urban areas. [ABSTRACT FROM AUTHOR]

Exotic annual grass invasions in water‐limited systems cause degradation of native plant and animal communities and increased fire risk. The life history of invasive annual grasses allows for high sensitivity to interannual variability in weather. Current distribution and abundance models derived from remote sensing, however, provide only a coarse understanding of how species respond to weather, making it difficult to anticipate how climate change will affect vulnerability to invasion. Here, we derived germination covariates (rate sums) from mechanistic germination and soil microclimate models to quantify the favorability of soil microclimate for cheatgrass (Bromus tectorum L.) establishment and growth across 30 years at 2662 sites across the sagebrush steppe system in the western United States. Our approach, using four bioclimatic covariates alone, predicted cheatgrass distribution with accuracy comparable to previous models fit using many years of remotely‐sensed imagery. Accuracy metrics from our out‐of‐sample testing dataset indicate that our model predicted distribution well (72% overall accuracy) but explained patterns of abundance poorly (R2 = 0.22). Climatic suitability for cheatgrass presence depended on both spatial (mean) and temporal (annual anomaly) variation of fall and spring rate sums. Sites that on average have warm and wet fall soils and warm and wet spring soils (high rate sums during these periods) were predicted to have a high abundance of cheatgrass. Interannual variation in fall soil conditions had a greater impact on cheatgrass presence and abundance than spring conditions. Our model predicts that climate change has already affected cheatgrass distribution with suitable microclimatic conditions expanding 10%–17% from 1989 to 2019 across all aspects at low‐ to mid‐elevation sites, while high‐ elevation sites (>2100 m) remain unfavorable for cheatgrass due to cold spring and fall soils. [ABSTRACT FROM AUTHOR]

Urbanisation is an ongoing process associated with multiple environmental changes affecting ecosystems worldwide. Temperature and habitat are main drivers of animal communities within cities, but quantifying their relative weights remains a challenge, as urban heat islands (UHI) often co-vary with land-cover. This study aims to disentangle the effects and relevant scale of temperature and habitat on ground-dwelling spider communities. Based on an original sampling design, we collected 20,761 spider individuals belonging to 137 species at 36 sampling sites in the city of Rennes (northwest France). We characterised communities by assessing the number of trapped individuals at each site, as well as calculating several metrics to estimate taxonomic and functional diversities. Temperature metrics were obtained from two sensor networks monitoring UHI (100-m resolution) and near-ground temperature (1-m resolution) independently. Land-cover and isolation were used to describe landscapes, and vegetation structure to describe local habitats. We used generalized linear mixed models to disentangle the effects of temperature from those of habitat at the landscape and local scales, and identified relationships between community descriptors and predictors. We show that temperature-related metrics are important predictors of spider communities, and that the landscape and local scales have independent effects. Near-ground temperature alone explained 24% of the number of trapped individuals, whereas UHI explained 20% of taxonomic diversity. Local vegetation height and cover were significant predictors of functional diversity, and explained 22% and 25% of variance, respectively. We conclude that locally applied planning measures could mitigate the loss of taxonomic diversity induced by the atmospheric UHI and promote the establishment of more diverse communities. [ABSTRACT FROM AUTHOR]

The very specific environment of peat bogs determines their highly specialized biota, including subarctic and boreal species. Nowadays we can observe habitat loss due to human activities for many cold adapted species in the temperate zone of Europe. Therefore, there is an urgent need to study the consequences of different levels of degradation of peatland biodiversity. We have investigated the effects of small ditches on habitat conditions for ground beetle and butterfly assemblages as compared to intact habitats in large peat bogs. In the sites along small ditches, the humidity is slightly higher than in natural sites, the sphagnum carpet and many specialized plant species are preserved. However, the plant cover was lower. Using pitfall trapping and standardized transect walks we have found that mean species richness and abundance were higher in intact habitats than in degraded sites. We found significant variation in species composition between habitat types for two studied taxonomic groups. Generalized linear mixed-effects models showed that vegetation cover structure was the main determinants of ground beetle and butterfly habitat quality in the studied peat bog sites. Implications for insect conservation: This study suggests that even moderate degradation of peat bogs caused a decrease in abundance and species richness in two taxa with rather different environmental preferences such as carabids and butterflies. These findings are important for understanding the small-scale impact on animal communities in degraded peatlands. [ABSTRACT FROM AUTHOR]

Restoring seagrasses provides habitat for animals, many of which play vital roles in the maintenance, persistence, and resilience of seagrass habitat. Understanding how the maturity of restored seagrass habitats influences the colonization and condition of associated animal communities can provide insights to inform restoration methods and improve outcomes. We surveyed mobile fauna at 132 sites in Vejle fjord, Denmark, in natural seagrass, bare sand, and restored seagrass (Zostera marina; eelgrass). Seagrass was transplanted 1, 2, 3, or 4 years ago (2019–2022). In addition to abundance and diversity metrics, we quantified individual condition metrics, and conducted metabolomic analysis on lesser pipefish (Syngnathus rostellatus). Seagrass‐associated species rapidly colonized restored habitats, such as common periwinkles and Baltic prawns. Bare sites and 1‐year‐old sites harbored very similar communities. A distinct shift thereafter saw restored communities converge irrespective of habitat age, and were similar to natural sites. We observed species‐specific trends in abundance related to seagrass cover that were positive, negative, or unimodal; abundance was highest when seagrass cover was intermediate (approximately 45–70%). Morphometric indices for three fish species, and metabolomic profiles for lesser pipefish, did not differ among sites. Our study adds to the growing body of literature showing rapid faunal colonization of restored Z. marina habitats, particularly when restored in close proximity to natural eelgrass. This provides impetus for continued investments in eelgrass restoration and suggests little need for building in time lags when including biodiversity benefits of seagrass restoration in natural capital assessments for this species. [ABSTRACT FROM AUTHOR]

Simple Summary: This study looked at how social and economic challenges, measured by the Social Vulnerability Index (SVI), affect animals entering and being adopted from seven shelters in the United States. We found that areas with higher social vulnerability, often characterized by more racial and ethnic minorities and lower income, had more animals coming in as strays or being seized by authorities, while adoptions were fairly evenly spread across vulnerability groups. Stray animals, in particular, were more common from high-vulnerability areas compared to owner surrenders, which were less influenced by social vulnerability. Interestingly, animals from these high-vulnerability areas were not more likely to be euthanized than those from other areas. This suggests that shelters in this study are engaging with adopters across diverse community members. Recommendations include further research into the high volume of stray adult dogs as well as spay/neuter and Trap-Neuter-Vaccinate-Return programming targeted in areas of the community that are the most socially vulnerable to address the volume of young animals. (1) Background: This study investigates the impact of social vulnerability, as quantified by the Social Vulnerability Index (SVI), on animal shelter intakes and adoptions, and the flow of animals between SVI groups at seven shelters within the United States. Understanding how social vulnerability influences these factors is crucial for developing targeted interventions to improve shelter outcomes and community support programs. (2) Methods: The research analyzed intake and adoption data from multiple animal shelters to assess the relationship between the social vulnerability at intake and adoption locations based on Census Tract obtained from addresses, focusing on comparison across strays, seized animals, and owner surrenders. Effect sizes were calculated to determine the magnitude and practical implications of these relationships. The study also examined the distribution of outcomes and reasons for animal surrender in relation to SVI levels. (3) Results: The analysis found that animals tended to enter shelters from areas of higher vulnerability while being adopted out to homes from all levels of vulnerability. Stray animals and those seized by authorities were more likely to come from high-SVI areas and showed a stronger disparity between intake and adoption SVI levels than owner surrenders. Racial/ethnic minority status and socioeconomic status were the components of the SVI that produced the strongest differences between intake and adoption vulnerability levels. Adoptions, however, were evenly distributed across different SVI levels, suggesting equitable access to adoption services. The study also identified that animals from high-SVI areas were not euthanized at higher rates compared to those from lower-SVI areas. (4) Conclusions: The findings highlight the need for further investigation into the high numbers of stray adult dogs in areas of communities that are most socially vulnerable as well as programs to address the volume of young animals originating from these areas. The equitable distribution of adoptions across SVI levels suggests that shelters are effectively engaging with socioeconomically and racially/ethnically diverse communities. Future research should focus on exploring the dynamics of stray animal intakes and enforcement patterns to enhance community and animal welfare initiatives. [ABSTRACT FROM AUTHOR]

In a fast-changing world, understanding how organisms adapt to their environment is a pressing necessity. Research has focused on genetic adaptation, while our understanding of non-genetic modes is still in its infancy. The host-associated microbiome can be considered a non-genetic mode of adaptation, which can strongly influence an organism's ability to cope with its environment. However, the role of the microbiome in host ecological dynamics is largely unexplored, particularly in animal communities. Here, we discuss the following hypothesis: invasive species may rapidly adapt to local conditions by adopting beneficial microbes from similar co-occurring native species. This occurs when the invader's fitness is influenced by adaptation to local conditions that is facilitated by microbes acquired from native microbiomes. We present a minimal mathematical model to explore this hypothesis and show that a delayed acquisition of native microbes may explain the occurrence of an invasion lag. Overall, our results contribute to broadening the conceptualization of rapid adaptation via microbiome transfer and offer insights towards designing early intervention strategies for invasive species management. [ABSTRACT FROM AUTHOR]

Tropical biodiversity is undergoing unprecedented changes due to the hydrological cycle intensification, characterized by more intense droughts and wet seasons. This raises concerns about the resilience of animal and plant communities to such extremes and the existence of potential refugia—areas theorized to safeguard biological communities from adverse climate impacts. Over 20 years of monitoring in Central Amazonia, we investigated the short‐term and long‐term effects of hydrological cycle intensification on bird, fish, ant, and palm communities. We explored whether the 'insurance effect' of climate trends (droughts buffered by preceded wet seasons) or 'environmental refugia' (droughts or floods buffered by topographic features) could lessen the impact of climate events on community composition, richness, evenness, and species rank. Pronounced abundance changes were observed among animal species, whereas palm species showed relative temporal stability. Birds and fish were more affected by the immediate and long‐term severity of droughts and wet periods, while ants responded primarily to short‐term drought impacts. Conversely, palm communities exhibited delayed responses to climate extremes, primarily in long‐term comparisons. As expected, the proposed 'insurance effect' mitigates the long‐term impacts of extreme climate events on animal and plant community trends. However, less extreme hydrological conditions linked to topographic features did not provide effective 'environmental refugia' for animals or plants during adverse climate conditions. These outcomes underscore the complex and varied biological responses to ongoing climate change, challenging the prevailing assumptions about the efficacy of environmental refugia and highlighting the nuanced resilience of biodiversity in Central Amazonia. [ABSTRACT FROM AUTHOR]

Prey-predator interactions across time and space strongly influence many animal communities. This study unveils the first insights into the ecology of the Eurasian red squirrel (Sciurus vulgaris) in Mongolia, and specifically in Bogd Khan Mountain Strictly Protected Area. We used by-catch data obtained from camera traps to analyze activity patterns and potential interactions with mammalian predators. Red squirrels exhibited primarily diurnal activity with occasional nocturnal forays, while potential predators like foxes (Vulpes vulpes, Vulpes corsac) and martens (Martes foina, Martes zibellina) displayed cathemeral and nocturnal patterns, respectively. The diurnal Pallas's cat (Otocolobus manul) showed the greatest activity overlap with squirrels. Suggesting predator avoidance behavior potentially mediated by olfactory cues, squirrel activity was negatively impacted by marten presence, which was in turn potentially affected by human disturbance. We highlight the need for further investigations, particularly regarding the dietary composition of Pallas's cats in forested habitats and the broader ecological implications of human disturbance on predator–prey dynamics within this crucial conservation area. [ABSTRACT FROM AUTHOR]

Canopy gaps are foundational features of rainforest biodiversity and successional processes. The bais of Central Africa are among the world's largest natural forest clearings and thought to be critically important islands of open‐canopy habitat in an ocean of closed‐canopy rainforest. However, while frequently denoted as a conservation priority, there are no published studies on the abundance or distribution of bais across the landscape, nor on their biodiversity patterns, limiting our understanding of their ecological contribution to Congolese rainforests. We combined remote sensing and field surveys to quantify the abundance, spatial distribution, shape, size, biodiversity, and soil properties of bais in Odzala‐Kokoua National Park (OKNP), Republic of the Congo (hereafter, Congo). We related bai spatial distribution to variation in hydrology and topography, compared plant community composition and 3D structure between bais and other open ecosystems, quantified animal diversity from camera traps, and measured soil moisture content in different bai types. We found bais to be more numerous than previously thought (we mapped 2176 bais in OKNP), but their predominantly small size (80.7% of bais were <1 ha), highly clustered distribution, and restriction to areas of low topographic position make them a rare riparian habitat type. We documented low plant community and structural similarity between bai types and with other open ecosystems, and identified significant differences in soil moisture between bai and open ecosystem types. Our results demonstrate that two distinct bai types can be differentiated based on their plant and animal communities, soil properties, and vegetation structure. Taken together, our findings provide insights into how bais relate to other types of forest clearings and on their overall importance to Congolese rainforest ecosystems. [ABSTRACT FROM AUTHOR]

Simple Summary: This work provides an overview on the impact of bats' diet on their intestinal microorganism community and its influence on potential pathogenicity. Human expansion generates natural habitat alterations, which force bats to seek alternative sites, leading to contact with other animals, including humans. Exploring the relationship between the dietary habits of bats and the variety of their microbiome could contribute elucidating the potential role of bats as reservoirs of multidrug-resistant microorganisms and their implications in the dissemination of mutating viruses and antibiotic-resistant bacteria in the environment and possibly in their transmission to human and to domestic and wild animals. In this review, we tentatively tried to connect the most recent findings on the bat microbiome and to investigate on their microbial communities, that may vary even in conspecific hosts and are influenced by host physiology, feeding behavior and diet, social interactions, but also by habitat diversity and climate change. From a conservation perspective, understanding the potentially negative and indirect effects of habitat destruction on animal microbiota can also play a crucial role in the conservation and management of the host itself. According to the One Health concept, which recognizes an interdependence between humans, animals, and the environment, bat microbiota represents an indicator of host and environmental health, besides allowing for evaluation of the risk of emerging infectious diseases. We noticed that a growing number of studies suggest that animal microbiota may respond in various ways to changes in land use, particularly when such changes lead to altered or deficient food resources. We have highlighted that the current literature is strongly focused on the initial phase of investigating the microbial communities found in Chiroptera from various habitats. However, there are gaps in effectively assessing the impacts of pathogens and microbial communities in general in animal conservation, veterinary, and public health. A deeper understanding of bat microbiomes is paramount to the implementation of correct habitat and host management and to the development of effective surveillance protocols worldwide. [ABSTRACT FROM AUTHOR]

The present study investigated how young children understand the sophisticated concept of restorative justice in unintentional moral transgressions. A sex-balanced sample of 5-year-old (M = 5.67, SD = 0.34, 49.3% girls) and 8-year-old (M = 7.86, SD = 0.29, 46.0% girls) Chinese children (N = 193) participated in the study. In designing the materials, we distilled the multidimensional meanings of restorative justice into two stories, one addressing the theme of property violation and the other physical harm; both stories were set in an animal community. We then engaged the children in joint reading and an interview, during which they showed preference for the given treatments for the transgressor (two restorative treatments vs. two retributive treatments) and ranked two further sets of restorative vs. retributive treatments at the community level. The results indicated that most children favored restorative treatments over retributive treatments for a transgressor, and the 8-year-olds viewed psychological restoration more favorably and behavioral punishment less favorably than the 5-year-olds. The children also tended to endorse restorative treatments at the community level, revealing an understanding of the needs, and obligations of all parties concerned. Notably, more 8-than 5-year-olds showed a consistency in restorative orientation at this level. Interpreting our data through the lens of the Representational Redescriptionmodel, we attained amore refined account of young children's levels of understanding regarding restorative justice. These results provide insights for the early cultivation of restorative justice among young children, which is a cornerstone for its successful practice in any society. [ABSTRACT FROM AUTHOR]

Aim: Anthropogenic‐driven biodiversity loss can impact ecosystem stability. However, most studies have only evaluated the diversity–stability relationship at the local scale and we do not fully understand which factors stabilize animal populations and communities across scales. Here, we investigate the role of species dispersal ability, climate, spatial distance and different facets of biodiversity on the stability of butterfly populations and communities across multiple spatial scales. Location: Primarily Western Europe. Time Period: 2005–2016. Major Taxa Studied: Butterflies (Rhopalocera) of Europe. Methods: We assembled a continent‐wide database of European butterflies' abundance and used Structural Equation Modelling to evaluate the direct and indirect effects of multiple stabilizing mechanisms. In parallel, we tested the effect of dispersal ability on the stability at multiple spatial scales, using a butterfly mobility index as an indicator of dispersal capacity. Results: Regional stability strongly reflected local stability, which in turn was driven by both taxonomic and functional α‐diversity. Spatial asynchrony was also important for regional stability and it was driven by both functional β‐diversity and metapopulation asynchrony, which in turn increased with spatial distance among communities. We observed a positive effect of temperature on functional α‐diversity and on local stability, whereas precipitation negatively influenced local diversity. Finally, spatial asynchrony contributed more to the regional stability of less mobile species compared to highly mobile ones, indicating that both extrinsic and intrinsic determinants of connectivity impact regional stability indirectly. Main Conclusions: Our results demonstrate the importance of local and regional processes for regional stability. However, the relative contribution of spatial asynchrony and metapopulation asynchrony increases with connectivity loss, especially for less mobile species, indicating that landscape management should be tailored depending on the dispersal capacity of organisms. Both local biodiversity loss and regional biotic homogenization destabilize metacommunities, with potential implications for the reliable provision of ecosystem functions. [ABSTRACT FROM AUTHOR]

Simple Summary: Predation relationships and competition relationships shape interspecies coexistence in wild animal communities. Studying the temporal and spatial activity patterns of wild animals is crucial for understanding their behavior, species interactions, and resource requirements. We evaluated the spatiotemporal overlap between 15 different dominant species in the southwestern mountains of China, including Carnivora (such as Panthera pardus and Lynx lynx), Artiodactyla (such as Moschus spp. and Rusa unicolor), Primate (Macaca mulatta), and Galliformes (Crossoptilon crossoptilon, Ithaginis cruentus). We found that different species exhibit different activity patterns to reduce intense resource competition, with competition being more intense in cold seasons than warm seasons. This may be due to abundant resources in summer but scarce food in winter, as well as increased energy demands during cold seasons, as expected using physiology theory. Temporal and spatial factors regulate the interactions between apex predators, mesocarnivores, and herbivores. Prey adjust their activity patterns and spatial utilization based on predator activities; in turn, predators also adapt to the activities of their prey. To elucidate the factors influencing the daily activity rhythms of animals, 115 camera traps were established from September 2019 to June 2023 to assess the influences of interspecific relationships and seasons on the daily activity rhythms of animals in the southwest mountains of China. The species captured by the cameras included six Carnivora (such as Panthera pardus and Lynx lynx), six Artiodactyla (such as Moschus spp. and Rusa unicolor), one Primate (Macaca mulatta), and two Galliformes (Crossoptilon crossoptilon, Ithaginis cruentus). The results demonstrated that the 15 species exhibited different activity rhythms and peak activities to reduce intense resource competition. There were differences in the species' activity rhythms in different seasons, with competition among different species being more intense in the cold season than in the warm season. In predation relationships, the overlap coefficient in the cold season exceeded that of the warm season, possibly due to the abundant resources in summer and food scarcity in winter. In competitive relationships, 15 pairs of species exhibited significantly higher overlap coefficients in the cold season compared to the warm season, possibly due to increased demands for energy during the cold period or seasonal changes in predatory behavior. By analyzing the daily and seasonal activity patterns of dominant species in the study area, temporal niche overlaps were established to compare the competition levels between species. These findings indicate that the activity rhythms of the animals in this area not only result from evolutionary adaptation but are also influenced by season, food resources, and interspecific relationships (predation and competition). Thus, efforts should be made to reduce human interference, protect food resources in the winter, and monitor animals' interspecific relationships to protect animal diversity and maintain the stability of the ecosystem in this biodiversity hotspot in China. [ABSTRACT FROM AUTHOR]

Fires are becoming increasingly frequent, intense, severe and prolonged worldwide, and such situation is worsening. As a result, extreme fire conditions will increase, with consequences for wildlife, including increased mass mortality and changes in trophic relationships in natural communities. This intensification is expected to be particularly pronounced in the Mediterranean ecosystems. In this scoping review, we summarized current knowledge and gaps in understanding the effects of fires on wildlife, focusing on predator–prey interactions. These interactions play a critical role in animal communities and their understanding is fundamental for appropriate management and conservation. Mammals were chosen as a model group because of their remarkable ecological role. We grouped and analysed the post-wildfire changes in the predator–prey relationships into three-time intervals: immediate, short- and long-term effects. This is relevant as vegetation restoration, by altering cover and habitat structure, may affect hunting strategies and anti-predatory behaviour. Our review showed that studies generally had several limitations, the most common of which were the lack of replication, the strong geographical bias, and the focus on few target species. Nevertheless, we could formally describe how fire affects predator–prey relationships in Mediterranean ecosystems through processes that exert different cascading effects at different times after the fire event. We encourage long-term studies on communities, including as many components of the food chain as possible, using an interdisciplinary approach, and prioritising investigations in high-risk ecosystems. [ABSTRACT FROM AUTHOR]

This study explored the characteristics of benthic animal communities in different water functional areas and the driving factors affecting changes in the community structure of four water functional zones of the Jiangsu section of the Yangtze River: the protection, buffer, reserve, and development and utilization zones. The results showed that the alpha diversity of the benthic animal communities in the protected and reserved zones was significantly higher than that of the buffer and development and utilization zones, and the benthic animal community structure differed significantly across different water functional zones. These zones indirectly affected the community of benthic fauna due to their environmental heterogeneity. Furthermore, the average degree, map density, and average clustering coefficient of the molecular ecological network were highest in the protected zone. The average path length was shorter, and there were more types and numbers of key species in the benthic animal community in the protected zone, indicating high levels of connectivity and efficiency in transferring substances, energy, and information between benthic animals. These results will provide a scientific basis for studying the characteristics and driving factors of benthic animal communities in the Yangtze River and have important significance for assessing and restoring aquatic ecology in the Yangtze River Basin. [ABSTRACT FROM AUTHOR]

Tamaulipan thornscrub forests (thornforests) have high ecological and economic values, yet over 90% of these forests have been lost, and they remain threatened, making them a conservation hotspot. For decades, federal, state, NGO, and corporate entities have been acquiring land and actively or passively restoring these forests, but results have been mixed and seldom monitored. This study characterized and quantified faunal communities of restored thornforest habitats in south Texas and examined the relationships between restored faunal communities and key site characteristics and environmental factors. We surveyed and analyzed mammal, bird, Lepidoptera, and herptile communities within 12 restored sites in the Lower Rio Grande Valley of southernmost Texas, USA. The site and environmental factors that influenced animal community composition, richness, diversity, and abundance varied widely among taxa. Time since restoration began and method of restoration influenced many community metrics, whereas patch size and extent of isolation influenced few. Several aspects of restored plant communities were influential, especially ground layer diversity, and high invasive plant cover negatively impacted many animal community metrics. If actively restoring a site, efforts to control invasive plants, foster native plant diversity, and provide a nearby water source are likely the most effective ways to promote faunal recolonization. [ABSTRACT FROM AUTHOR]

Background: The skin fungal communities of animals play a crucial role in maintaining host health and defending against pathogens. Because fungal infections can affect the skin microbiota of bats, gaining a comprehensive understanding of the characteristics of healthy bat skin fungal communities and the ecological processes driving them provides valuable insights into the interactions between pathogens and fungi. Methods: We used Kruskal-Wallis tests and Permutational Multivariate Analysis of Variance (PERMANOVA) to clarify differences in skin fungal community structure among bat species. A Generalized Linear Model (GLM) based on a quasi-Poisson distribution and partial distance-based redundancy analysis (db-RDA) was performed to assess the influence of variables on skin fungal communities. Using community construction models to explore the ecological processes driving fungal community changes, t-tests and Wilcoxon tests were used to compare the alpha diversity and species abundance differences between the fungal structure on bat species' skin and the environmental fungal pool. Results: We found significant differences in the composition and diversity of skin fungal communities among bat species influenced by temperature, sampling site, and body mass index. Trophic modes and skin fungal community complexity also varied among bat species. Null model and neutral model analysis demonstrated that deterministic processes dominated the assembly of skin fungal communities, with homogeneous selection as the predominant process. Skin fungal communities on bat species were impacted by the environmental fungal reservoir, and actively selected certain amplicon sequence variants (ASVs) from the environmental reservoir to adhere to the skin. Conclusion: In this study, we revealed the structure and the ecological process driving the skin fungal community across bat species in northern China. Overall, these results broaden our knowledge of skin fungal communities among bat species, which may be beneficial to potential strategies for the protection of bats in China. [ABSTRACT FROM AUTHOR]

Cold seeps, where geofluids containing methane and other hydrocarbons originating from the subseafloor seeps through the sediment surface, play important roles in the elemental and energy flux between sediment and seawater. These seep sites often harbor communities of endemic animals supported by chemolithoautotrophic bacteria, either through symbiosis or feeding. Despite these animal communities being intensively studied since their discovery in the 1980's, the contribution of carbon from seep fluid to symbiotic microbes and subsequently host animals remains unclear. Here, we used natural-abundance radiocarbon to discern carbon sources: the ambient bottom water or the seeping geofluid. The 14C concentrations were measured for vesicomyid clams, a parasitic calamyzine polychaete, and a siboglinid tubeworm species from four different cold seep sites around Japan. We found most vesicomyid clams exhibiting 14C concentrations slightly lower than that of the ambient bottom water, suggesting up to 9% of C for chemolithoautotrophy originates from geofluid DIC. The different extent of fluid contribution across species may be explained by different routes to incorporate DIC and/or different DIC concentrations in the geofluid at each seep site. Stable nitrogen isotopic compositions further suggested N incorporation from geofluids in these clams, where the burrowing depth may be a key factor in determining their δ15N values. The siboglinid tubeworm showed a clear dependency for geofluid DIC, with a contribution of > 40%. Our results demonstrate the effectiveness of 14C analyses for elucidating the nutritional ecology of cold seep animals and their symbionts, as was previously shown for hydrothermal vent ecosystems. [ABSTRACT FROM AUTHOR]

Over the past decade, there has been a growing interest in common octopus aquaculture, prompted by several factors such as the increase in market demand, the decline in overall fisheries and the search for more sustainable food resources. Nevertheless, this interest has raised concerns about the potential impact of largescale production and intensified farming practices in the future. This study aims to establish a baseline understanding of the natural microbial communities that inhabit skin mucus of the common octopus, describe its core microbiota, and assess the impact of captive rearing on these communities and animal welfare. The skin microbiome of wild-captured octopuses was compared with that of reared in aquaculture using 16S ribosomal RNA metabarcoding. The findings show that the core microbiota of octopus mucosal skin is dominated by the phyla Bacteroidota and Pseudomonadota, with Aurantivirga, Pseudofulvibacter, and Rubritalea being the most abundant genera. Despite differences in abundance, the microbiota composition and diversity between wild and aquaculture octopuses were similar. Wild samples had an enrichment of Gammaproteobacteria, including potentially pathogenic species such as Vibrio spp., Photobacteriumswingsii, and Lactococcus garvieae, which were less prevalent or absent in aquaculture samples. KEGG functional pathways predictions indicated a higher enrichment in functional pathways related to xenobiotic remediation in wild samples, reflecting their need to adapt to a more variable and potentially contaminated environment. This is the first study to characterize the mucosal skin microbiome of the common octopus and to compare wild and aquaculture specimens. The results suggest that current aquaculture practices support animal welfare through the use of controlled hatchery environments and high-quality water conditions. These insights are valuable for the development of sustainable and responsible aquaculture practices, with the octopus microbiome serving as a potential biomarker for health status and animal welfare. [ABSTRACT FROM AUTHOR]

Karimata Island is an island about 100 km west of Borneo, causes geographical isolation and generally always shows an impact on the diversity of animal communities that are less, one of the communities affected is herpetofauna. Herpetofauna is very important in an ecosystem so it is necessary to conduct a survey. The survey was conducted from April 1 to April 7, 2023 in Betok Jaya Village, Karimata Island which was divided in 3 observation areas based on habitat type using the Visual Encounter Survey method. Herpetofauna found consisted in 22 species divided into 5 species of amphibians and 17 species of reptiles with a total of 43 individuals. Herpetofauna located adjacent to human areas is vulnerable to various disturbances such as maritime transportation activities, household waste pollution and land clearing, which can be a threat to the herpetofauna community of Karimata Island. [ABSTRACT FROM AUTHOR]

The ongoing climate change calls for managing forest ecosystems in temperate regions toward more drought‐resistant and climate‐resilient stands. Yet ecological consequences of management options such as planting non‐native tree species and mixing coniferous and deciduous tree species have been little studied, especially on soil animal communities, key in litter decomposition and pest control. Here, we investigated the taxonomic and trophic structure of soil macrofauna communities in five forest types including native European beech (Fagus sylvatica), range‐expanding Norway spruce (Picea abies) and non‐native Douglas fir (Pseudotsuga menziesii) as well as conifer‐beech mixtures across loamy and sandy sites in northern Germany. Abundance of primary decomposers (feeding predominantly on litter) was high in Douglas fir and beech forests, benefiting from less acidic soil and more favorable litter resources compared to spruce forests, while secondary decomposers (feeding predominantly on microorganisms and microbial residues) reached highest densities in spruce forests. Differences in abundance and species richness among forest types generally varied between regions and were most pronounced in Douglas fir of the sandy region. However, trophic guilds differed more between regions than between forest types, indicating that environmental factors outweigh the importance of forest type on soil macrofauna communities. The analysis of stable isotopes (δ15N and δ13C values) supported the general robustness in trophic position of macrofauna trophic guilds against variations in forest types and regions, but indicated reduced detrital shifts and food‐chain lengths in coniferous compared to European beech forests with mixtures mitigating these effects. Overall, for evaluating consequences of future forest management practices on the structure and functioning of soil animal communities, regional factors need to be considered, but in particular at loamy sites the taxonomic and trophic structure of soil macrofauna communities are resistant against changes in forest types. [ABSTRACT FROM AUTHOR]

One of the greatest challenges in poultry production is maintaining intestinal mucosal barrier integrity and gut microbiota balance. Safe alternative antimicrobials that can regulate the microbial community through animal feed have been the subject of research in poultry production. This study evaluated the effect of Mentha piperita and Melaleuca alternifolia essential oils (EOs) on the gut microbiome and morphometry of broiler quails under normal feeding conditions. The gut microbiome was studied using a completely randomized design consisting of 4 treatments, namely control, bacitracin zinc, and the Eos M. piperita and M. alternifolia, with 8 repetitions and 7 quails per treatment, totaling 224 quails from 1 to 42 days old. The intestinal contents of the slaughtered quails were collected to evaluate the gut microbiome profile of their digestive tract. Gut morphometry was analyzed using a completely randomized factorial design, with four experimental rations for three intestinal sections (4x3) and five replications. The variables studied were villus surface area and height, crypt depth, villus height to cryptdepth ratio (VH:CD), villus-crypt ratio (V:C), villus width to height ratio (VW:H), and height of the intestinal epithelium and musculature. M. alternifolia (50 mg/kg of feed) in the diet of broiler quails improved gut morphometry, similar to the results obtained with bacitracin zinc. This EO also altered the gut microbiome of quails and reduced pathogenic bacterial diversity. [ABSTRACT FROM AUTHOR]

Arsenic occurs across the world in freshwater and marine environments, menacing the survival of aquatic organisms. Organic and inorganic forms of this substance can be found, in which the inorganic form is more hazardous than the organic form. Most aquatic bodies contain inorganic arsenic species, but organic species are believed to be the dominant form of arsenic in the majority of fish. Natural and anthropogenic both are the sources of water contamination with arsenic. Its bioaccumulation and transfer from one trophic level to another in the aquatic food chain make arsenic a vital environmental issue. Continuous exposure to low concentrations of arsenic in aquatic organisms including fish leads to its bioaccumulation, which may affect organisms of higher trophic levels including large fishes or humans. Humans can be exposed to arsenic through the consumption of fish contaminated with arsenic. Hence, the present review facilitates our understanding about sources of arsenic, its bioaccumulation, food chain transfer, and its effect on the fish health. Also, "Poison in the Water: Arsenic's Silent Assault on Fish Health" serves as a wake‐up call to recognize the pressing need to address arsenic contamination in water bodies. By understanding its devastating impact on fish health, we can strive to implement sustainable practices and policies that safeguard our precious aquatic environments and ensure the well‐being of both wildlife and human communities that depend on them. Arsenic poses a global threat to aquatic organisms. Natural and manmade sources pollute water with arsenic. Continuous exposure to low arsenic concentrations causes its bioaccumulation, which can harm larger fish or humans. This review explains arsenic sources, bioaccumulation, food chain transfer, and fish health effects. By comprehending its negative effects on fish health, we can establish sustainable practices and regulations to protect aquatic habitats and preserve the well‐being of animals and human communities. [ABSTRACT FROM AUTHOR]

Global migrations of diverse animal species often converge along the same routes, bringing together seasonal assemblages of animals that may compete, prey on each other, and share information or pathogens. These interspecific interactions, when energetic demands are high and the time to complete journeys is short, may influence survival, migratory success, stopover ecology, and migratory routes. Numerous accounts suggest that interspecific co-migrations are globally distributed in aerial, aquatic, and terrestrial systems, although the study of migration to date has rarely investigated species interactions among migrating animals. Here, we test the hypothesis that migrating animals are communities engaged in networks of ecological interactions. We leverage over half a million records of 50 bird species from five bird banding sites collected over 8 to 23 y to test for species associations using social network analyses. We find strong support for persistent species relationships across sites and between spring and fall migration. These relationships may be ecologically meaningful: They are often stronger among phylogenetically related species with similar foraging behaviors and nonbreeding ranges even after accounting for the nonsocial contributions to associations, including overlap in migration timing and habitat use. While interspecific interactions could result in costly competition or beneficial information exchange, we find that relationships are largely positive, suggesting limited competitive exclusion at the scale of a banding station during migratory stopovers. Our findings support an understanding of animal migrations that consist of networked communities rather than random assemblages of independently migrating species, encouraging future studies of the nature and consequences of co-migrant interactions. [ABSTRACT FROM AUTHOR]

In this article we study the social dynamic of temporal partitioning congestion games (TPGs), in which participants must coordinate an optimal time-partitioning for using a limited resource. The challenge in TPGs lies in determining whether users can optimally self-organize their usage patterns. Reaching an optimal solution may be undermined, however, by a collectively destructive meta-reasoning pattern, trapping users in a socially vicious oscillatory behavior. TPGs constitute a dilemma for both human and animal communities. We developed a model capturing the dynamics of these games and ran simulations to assess its behavior, based on a 2×2 framework that distinguishes between the players' knowledge of other players' choices and whether they use a learning mechanism. We found that the only way in which an oscillatory dynamic can be thwarted is by adding learning, which leads to weak convergence in the no-information condition and to strong convergence in the with-information condition. We corroborated the validity of our model using real data from a study of bats' behaviour in an environment of water scarcity. We conclude by examining the merits of a complexity-based, agent-based modelling approach over a game-theoretic one, contending that it offers superior insights into the temporal dynamics of TPGs. We also briefly discuss the policy implications of our findings. [ABSTRACT FROM AUTHOR]

Background: Animal bacterial symbionts are established early in life, either through vertical transmission and/or by horizontal transmission from both the physical and the social environment, such as direct contact with con- or heterospecifics. The social environment particularly can influence the acquisition of both mutualistic and pathogenic bacteria, with consequences for the stability of symbiotic communities. However, segregating the effects of the shared physical environment from those of the social interactions is challenging, limiting our current knowledge on the role of the social environment in structuring bacterial communities in wild animals. Here, we take advantage of the avian brood-parasite system of Eurasian magpies (Pica pica) and great spotted cuckoos (Clamator glandarius) to explore how the interspecific social environment (magpie nestlings developing with or without heterospecifics) affects bacterial communities on uropygial gland skin. Results: We demonstrated interspecific differences in bacterial community compositions in members of the two species when growing up in monospecific nests. However, the bacterial community of magpies in heterospecific nests was richer, more diverse, and more similar to their cuckoo nest-mates than when growing up in monospecific nests. These patterns were alike for the subset of microbes that could be considered core, but when looking at the subset of potentially pathogenic bacterial genera, cuckoo presence reduced the relative abundance of potentially pathogenic bacterial genera on magpies. Conclusions: Our findings highlight the role of social interactions in shaping the assembly of the avian skin bacterial communities during the nestling period, as exemplified in a brood parasite—host system. [ABSTRACT FROM AUTHOR]

Stray dogs and cats pose significant challenges for public health and animal welfare due to their potential involvement in zoonotic disease transmission, accidents, and aggressions. Large urban centers exacerbated challenges due to the presence of these animals in public areas with high human density. Ethical Population Management Programs (EPMP), rooted in the One Health approach, are crucial for addressing this issue comprehensively. This study aimed to demonstrate the approach on cats and dogs EPMP and evaluate the perceptions of academic community regarding EPMP implementation on a campus situated in urban territory. The study was conducted at the Pampulha campus of UFMG in Belo Horizonte, Brazil. In response to issues of animal abandonment and conflicts, the Permanent Commission for Animal Policies (CPPA-UFMG) was established in 2019 to manage the campus’s dog, cat, and wildlife populations. The commission implemented the Trap-Neuter-Return (TNR) method, along with health assessments and vaccinations for animals. Interviews were conducted with campus staff to gauge their perception of animal management strategies. Retrospective and prospective analyses of the commission’s actions were carried out to assess implementation processes and challenges. The animal population survey conducted on campus between July 2018 and September 2021 revealed a total of 266 animals recorded. Among these animals, 195 were cats (73.3%) and 71 were dogs (26.7%), with the majority being adults. Subsequent surveys in 2019 and 2021 showed a slight increase in the animal population, with measures such as sterilization contributing to population control. Perception analysis among campus users indicated strategies such as TNR were widely endorsed for population control. The employees perception questionnaire was applied to 115 individuals, representing 42  units/departments and five gates. Associations were found between these beliefs and support for institutional actions. The majority favored sterilization (92.17%) and agreed that TNR is an appropriate approach to population control. Overall, the study reflects a community concerned about animal welfare and supportive of measures to address population management and cruelty prevention. The continuous efforts of the university’s CPPA have led to stability in the resident animal population, indicating success in achieving population control objectives. [ABSTRACT FROM AUTHOR]

Direct trophic links between aboveground and belowground animal communities are rarely considered in food web models. Most invertebrate animals inhabiting aboveground space eventually become prey of soil predators and scavengers forming a gravity-driven spatial subsidy to detrital food webs, but its importance remains unquantified. We used laboratory-grown 15N-labeled Collembola to trace the incorporation of arthropod rain into soil food webs. Live or euthanized Collembola were supplemented once to field mesocosms in the amount equivalent to the mean daily input of the arthropod rain (19 mg d.w. m−2). After the addition of live Collembola, the isotopic label was found most often in predatory Trombidiformes (83% of samples) and Mesostigmata mites (85%), followed by Araneae (58%), Chilopoda (45%), and Coleoptera (29%). Among non-predatory groups, the isotopic label was recorded in Thysanoptera (27%), Collembola (24%), and Oribatida (18%). The 15N-label was also detected in Symphyla, Formicidae, Diplura, Diplopoda, Opiliones, Diptera, Hemiptera, Oligochaeta, and Nematoda. There was a positive correlation between natural 15N abundance and the frequency of the isotopic label among predators, but not among decomposers. In the non-replicated treatment, in which dead collembolans were added, the label was found in predators and decomposers in approximately equal proportions (21–25%). Unlike other forms of the aboveground subsidy (such as leaf litter, frass, or honeydew) that are primarily processed by microorganisms, arthropod rain is assimilated directly by the animals. The high frequency of consumption of the aboveground subsidy suggests that it plays a significant role in maintaining the abundance of soil predators. [ABSTRACT FROM AUTHOR]

Mites are among the most abundant invertebrates in subsurface ecosystems, and their community assemblages and distributions are often significantly influenced by the diversity of habitat resources. The cave ecosystem encompasses drastic changes in nonbiological factors, such as changes in lighting conditions from bright to extraordinarily dark and habitat gradients of surface plant resources from abundant to scarce or even disappearing, providing an ideal unique environment for evaluating the assembly mechanism of soil animal communities. Nevertheless, there still needs to be a sufficient understanding of the biodiversity patterns and drivers of mite communities across environmental gradients in karst caves. We conducted a comprehensive survey on the composition and diversity of soil mites in three photometric zones (dark, twilight, and light) of a typical karst cave and its adjoining extractive environments (forest scrub and farmland). Our research aimed to investigate the ecological relationships of mite communities between above‐ and below‐ground habitats and the effects of abiotic factors on mite communities. We collected 49 families, 86 genera, and 1284 mites. In the external cave environment, we captured 1052 mites from 72 genera and 45 families; in the internal cave environment, we captured 232 mites from 46 genera and 29 families. The abundance, richness of genera, and diversity parameters of the mite community decreased from the cave entrance to the cave interior with decreasing light intensity. Oribatid mites dominated the mite community. Protoribates and Scheloribates were the dominant genera, along with Tectocepheus and 11 other genera, which primarily distinguished the mite communities among different habitats. Forty endemic taxa were found in the external cave environment, compared to 14 endemic taxa in the internal cave environment. The mite community showed a strong preference for the cave ecosystem habitat. Temperature, humidity, and soil nitrogen content significantly influenced the distribution pattern of mite communities (VIP > 0.8, p < 0.05). [ABSTRACT FROM AUTHOR]

Non‐native tree species and mixed forests have been increasingly employed in forestry practice as a safeguard against climate change and as a tool to foster biodiversity while providing economic benefits. Though these changes in forest composition may affect animal communities and ecosystem processes, they are seldom studied through a plant–animal interaction perspective.Here we investigated how forests with varying proportions of a native broadleaf (Fagus sylvatica) and two conifers (introduced Pseudotsuga menziesii and native Picea abies) affect rodents and their interactions with seeds. We surveyed terrestrial small mammal communities, estimated species' densities, assessed seed preference by rodents, collected data on environmental variables (understory density and tree basal area), measured Fagus sylvatica seed production and tracked 1200 seeds of Fagus sylvatica in 20 different forest plots in northern Germany in a mast and non‐mast year for Fagus sylvatica.Forest composition influenced the interactions between rodents and seeds. In forests with a lower proportion of broadleaves, beech seeds were harvested faster and in greater quantities, had diminished survival and were less often cached. These results are in agreement with three other findings: (a) seed fate responded to the proportion of broadleaves and conifers irrespective of conifer tree identity, (b) rodents preferred nutritious beech seeds over small conifer seeds, and (c) higher proportions of seeds were harvested during the period when beech seeds were scarce (non‐mast year).Synthesis and applications: This work provides evidence of how forest composition can affect plant–animal interactions without necessarily altering animal communities or population densities. Specifically, we found no differences between forests with native and non‐native conifer trees regarding small mammal community, seed‐rodent interactions or seed fate. Furthermore, rodents may provide a service in mixed forests by primarily preying upon seeds of Fagus sylvatica, a superior‐competitive species, and thus mitigate beech dominance over conifer species. [ABSTRACT FROM AUTHOR]

Multimodality reporter gene imaging combines the sensitivity, resolution and translational potential of two or more signals. The approach has not been widely adopted by the animal imaging community, mainly because its utility in this area is unproven. We developed a new complementation-based reporter gene system where the large component of split NanoLuc luciferase (LgBiT) presented on the surface of cells (TM-LgBiT) interacts with a radiotracer consisting of the high-affinity complementary HiBiT peptide labeled with a radionuclide. Radiotracer uptake could be imaged in mice using SPECT/CT and bioluminescence within two hours of implanting reporter-gene-expressing cells. Imaging data were validated by ex vivo biodistribution studies. Following the demonstration of complementation between the TM-LgBiT protein and HiBiT radiotracer, we validated the use of the technology in the highly specific in vivo multimodal imaging of cells. These findings highlight the potential of this new approach to facilitate the advancement of cell and gene therapies from bench to clinic. [ABSTRACT FROM AUTHOR]

The opening of habitats associated with the emergence of C4 grasslands during the Neogene had a massive influence on the evolution of plant and animal communities. Strikingly, the impacts of grassland expansion on species diversification in Africa, where the largest surface of grasslands and savannas in the world is located, are not well understood. To explore the impact of habitat opening, we investigate the evolution of noctuid stemborers, a group of moths mostly associated with open habitats, and whose diversity is centered in the Afrotropics. We generate a dated molecular phylogeny for ca 80% of the known stemborer species, and assess the role of habitat opening on the evolutionary trajectory of the group through a combination of parametric historical biogeography, ancestral character state estimation, life history traits and habitat‐dependent diversification analyses. Our results support an origin of stemborers in Southern and East Africa ca 20 million years ago (Ma), with range expansions linked to the increased availability of open habitats to act as dispersal corridors, and closed habitats acting as potent barriers to dispersal. Early specialization on open habitats was maintained over time, with shifts towards closed habitats being rare and invariably unidirectional. Analyses of life history traits showed that habitat changes involved specific features likely associated with grassland adaptations, such as variations in larval behavior and color. We compare these findings to those previously inferred for an Afrotropical butterfly group that diversified roughly in parallel with the stemborers but distributed predominantly in closed habitats. Remarkably, these two groups show nearly opposite responses in relation to habitat specialization, whether in terms of biogeographical patterns, or in terms of rates of transition between open and closed habitats. We conclude that habitat opening played a major role in the evolutionary history of Afrotropical lineages through dispersal and adaptation linked to habitat shifts. [ABSTRACT FROM AUTHOR]

Metacommunity processes have the potential to determine most features of the community structure. However, species diversity has been the dominant focus of studies. Nestedness, modularity and checkerboard distribution of species occurrences are main components of biodiversity organisation. Within communities, these patterns emerge from the interaction between functional diversity, spatial heterogeneity and resource availability. Additionally, the connectivity determines the pool of species for community assembly and, eventually, the pattern of species co‐occurrence within communities.Despite the recognised theoretical expectations, the change in occurrence patterns within communities along ecological gradients has seldom been considered. Here, we analyse the spatial occurrence of animal species along sampling units within 18 temporary ponds and its relationship with pond environments and geographic isolation.Isolated ponds presented a nested organisation of species with low spatial segregation—modularity and checkerboard—and the opposite was found for communities with high connectivity. A pattern putatively explained by high functional diversity in ponds with large connectivity and heterogeneity, which determines that species composition tracks changes in microhabitats. On the contrary, nestedness is promoted in dispersal‐limited communities with low functional diversity, where microhabitat filters mainly affect richness without spatial replacement between functional groups.Vegetation biomass promotes nestedness, probably due to the observed increase in spatial variance in biomass with the mean biomass. Similarly, the richness of vegetation reduced the spatial segregation of animals within communities. This result may be due to the high plant diversity of the pond that is observed similarly along all sampling units, which promotes the spatial co‐occurrence of species at this scale.In the study system, the spatial arrangement of species within communities is related to local drivers as heterogeneity and metacommunity processes by means of dispersal between communities. Patterns of species co‐occurrence are interrelated with community biodiversity and species interactions, and consequently with most functional and structural properties of communities. These results indicate that understanding the interplay between metacommunity processes and co‐occurrence patterns is probably more important than previously thought to understand biodiversity assembly and functioning. [ABSTRACT FROM AUTHOR]

Background: In Kazakhstan, until recently, issues regarding the responsible and humane treatment of animals were unregulated. The first law, "On Responsible Treatment of Animals," was adopted in 2021, defining the place of animals in the system of public relations and guaranteeing their protection. However, the law includes an exception regarding the slaughter of animals during religious ceremonies, which has caused discussions and disputes between public organisations for the protection of animals and religious communities. Impressive results of balancing animal welfare with religious freedom can be found in the EU. This article conducts a comparative legal study of Kazakh and some EU Member State legislations with regard to religious slaughter. Methods: This study employed various methodologies, utilising both theoretical and empirical approaches. These methodologies encompassed the comparative legal method, which allowed the authors to analyse and research foreign experience in animal rights protection to pinpoint the most important features applicable to Kazakh legislation. Statistical data was also collected to identify patterns and trends. Based on this, a forecast was made indicating a growing population, thereby suggesting an increase in animal consumption and utilisation. Therefore, this article on the protection of animal rights is a timely and relevant study. Moreover, the authors conducted an analysis of specific cases from foreign countries, aiding in the identification of the features and challenges of law enforcement practice. The dialectical method was central to examining the research problem. It enabled the identification of contradictions and interrelationships between classical and religious methods of mortification. Results and Conclusions: Based on the study's results, several practical proposals are put forward to eliminate or regularise the existing legislative derogation in respect of religious slaughter. The present contribution concludes that the Kazakh legal framework on animal rights protection has shortcomings that require improvements by enshrining specific methods of animal slaughtering, which can be drawn on European experience. [ABSTRACT FROM AUTHOR]

BACKGROUND: Biological invasions are a leading cause of reductions in global biodiversity. Islands are particularly sensitive to invasions, which often result in cascading impacts throughout island communities. Wild pigs (Sus scrofa) are globally invasive and pose threats to numerous taxa and ecosystems, particularly for islands where they have contributed to declines of many endemic species. However, the impacts of wild pig diet on the flora and fauna remain understudied in many island systems. RESULTS: We used DNA metabarcoding of wild pig fecal samples to quantify the seasonal diet composition of wild pigs on three barrier islands in the southeastern United States. Wild pigs exhibited a diverse diet dominated by plants, but also including marine and terrestrial animals. The diet composition of plants varied seasonally and between islands. Consumption of invertebrates also changed seasonally, with a shift to coastal invertebrates, particularly crabs, in spring and summer. Vertebrates were found in <10% of samples, but spanned broad taxa including amphibians, fish, mammals, and reptiles. Species consumed by wild pigs indicate that wild pigs use a variety of habitats within barrier islands for foraging, including maritime forests, saltmarshes, and beaches. CONCLUSIONS: An observed shift to beach foraging during sea turtle nesting season suggests wild pigs have potential to hinder nesting success on islands without established management programs. These findings provide insight into the diverse diets of wild pigs on barrier islands and highlight the need for removal of wild pigs from sensitive island ecosystems because of their potential impacts to native plant and animal communities. © 2024 The Authors. Pest Management Science published by John Wiley & Sons Ltd on behalf of Society of Chemical Industry. [ABSTRACT FROM AUTHOR]

Leptospirosis is a zoonosis with global public health impact, particularly in poor socio-economic settings in tropical regions. Transmitted through urine-contaminated water or soil from rodents, dogs, and livestock, leptospirosis causes over a million clinical cases annually. Risk factors include outdoor activities, livestock production, and substandard housing that foster high densities of animal reservoirs. This One Health study in southern Chile examined Leptospira serological evidence of exposure in people from urban slums, semi-rural settings, and farm settings, using the Extreme Gradient Boosting algorithm to identify key influencing factors. In urban slums, age, shrub terrain, distance to Leptospira-positive households, and neighborhood housing density were contributing factors. Human exposure in semi-rural communities was linked to environmental factors (trees, shrubs, and lower vegetation terrain) and animal variables (Leptospira-positive dogs and rodents and proximity to Leptospira-positive households). On farms, dog counts, animal Leptospira prevalence, and proximity to Leptospira-contaminated water samples were significant drivers. The study underscores that disease dynamics vary across landscapes, with distinct drivers in each community setting. This case study demonstrates how the integration of machine learning with comprehensive cross-sectional epidemiological and geospatial data provides valuable insights into leptospirosis eco-epidemiology. These insights are crucial for informing targeted public health strategies and generating hypotheses for future research. [ABSTRACT FROM AUTHOR]

In the landscape of the Dolomites, within the protected area of the Paneveggio - Pale di S. Martino Park in the Eastern Alps of Italy, a study was conducted to explore the distribution of carabid beetles. To achieve this, pitfall traps were placed along a 1000-m elevation gradient, following the bioclimatic gradient from spruce forests to the resilient pioneer vegetation in the extreme high-altitude environments. The research revealed that both community diversity and biogeographic diversity exhibited a clear correlation with the bioclimatic gradient. As one ascended to higher altitudes, the composition and distribution of carabid beetle communities shifted, reflecting the bioclimatic gradient. The chorological spectrum of the communities showed that Pleistocene paleoclimatic events provided the triggering factors affecting the postglacial recolonization of alpine ecosystems of the Dolomites region. Most of the sampled species displayed specific life strategies that enabled them to thrive in this harsh setting, responding to the selective pressures imposed by ecological factors. An extensive dataset encompassing the diversity of carabid beetles in these high-altitude domains was created. Given that the studied environments are widely distributed along the Italian Eastern Alps, the dataset serves a crucial purpose as it can be used as a reference for other research campaigns conducted in similar environments. Furthermore, it could act as a temporal benchmark for future researches on insects living in extreme environments, e.g. the Dolomites, or for comparing changes in climate that may be detected by future studies in the same geographic area.

The selective factors that shape phenotypic diversity in prey communities with aposematic animals are diverse and coincide with similar diversity in the strength of underlying secondary defences. However, quantitative assessments of colour pattern variation and the strength of chemical defences in assemblages of aposematic species are lacking. We quantified colour pattern diversity using quantitative colour pattern analysis (QCPA) in 13 dorid nudibranch species (Infraorder: Doridoidei) that varied in the strength of their chemical defences. We accounted for the physiological properties of a potential predator's visual system (a triggerfish, Rhinecanthus aculeatus) and modelled the appearance of nudibranchs from multiple viewing distances (2 and 10 cm). We identified distinct colour pattern properties associated with the presence and strength of chemical defences. Specifically, increases in chemical defences indicated increases in colour pattern boldness (i.e. visual contrast elicited via either or potentially coinciding chromatic, achromatic and/or spatial contrast). Colour patterns were also less variable among species with chemical defences when compared to undefended species. Our results indicate correlations between secondary defences and diverse, bold colouration while showing that chemical defences coincide with decreased colour pattern variability among species. Our study suggests that complex spatiochromatic properties of colour patterns perceived by potential predators can be used to make inferences on the presence and strength of chemical defences. [ABSTRACT FROM AUTHOR]

Introduction: Globally, rodents and shrew populations constitute crucial elements of diverse environments and animal communities. It is imperative to study their population dynamics to mitigate any potential negative impact on humans, as they can be involved in the transmission of critical zoonotic agents, such as Blastocystis. Therefore, this study aimed to identify the prevalence and genetic composition of Blastocystis in wild rodents and shrews residing in the Zhejiang provinces of China. Methods: A total of 652 wild rodents and and shrews were captured from three different regions in Zhejiang Province from April 1st to October 31, 2023. The DNA was isolated by collecting fresh feces from the intestines of each rodent or and shrew. Rodent and shrew species were examined by vertebrate cytochrome b (cytb) analysis and PCR amplification. Blastocystis was also found in all fecal samples using PCR analysis and sequencing of the partial small subunit of ribosomal RNA (SSU rRNA) gene. Results: Among all the samples, 6.6% (43/652) showed a positive result for Blastocystis. In the results, 6 species of rodent and shrew were identified with Blastocystis, including Apodemusagrarius (n = 36) (2.8%), Niviventer confucianus (n = 75) (17.3%), Rattus losea (n = 18) (5.6%), R. norvegicus (n = 155) (2.6%), R. tanezumi (n = 86) (3.5%), and Suncus murinus (n = 282) (7.4%). The existence of 6 Blastocystis subtypes, ST4 (n = 33), ST1 (4), ST7 (n = 3), ST2 (n = 1), ST3 (n = 1), and ST5 (n = 1), were confirmed by sequence analysis. Discussion: Based on the molecular data obtained, the wild rodents and shrews under investigation were found to be concurrently infected with zoonotic subtypes of Blastocystis, including ST1 to ST5 and ST7. This suggests that these animals could potentially pose a zoonotic threat to humans and other animals susceptible to Blastocystis infection. [ABSTRACT FROM AUTHOR]