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ABSTRACT Comparative approaches in animal gut microbiome research have revealed patterns of phylosymbiosis, dietary and physiological convergences, and environment–host interactions. However, most large‐scale comparative studies, especially those that are highly cited, have focused on mammals, and efforts to integrate comparative approaches with existing ecological frameworks are lacking. While mammals serve as useful model organisms, developing generalised principles of how animal gut microbiomes are shaped and how these microbiomes interact bidirectionally with host ecology and evolution requires a more complete sampling of the animal kingdom. Here, we provide an overview of what past comparative studies have taught us about the gut microbiome, and how community ecology theory may help resolve certain contradictions in comparative gut microbiome research. We explore whether certain hypotheses are supported across clades, and how the disproportionate focus on mammals has introduced potential bias into gut microbiome theory. We then introduce a methodological solution by which public gut microbiome data of understudied hosts can be compiled and analysed in a comparative context. Our aggregation and analysis of 179 studies shows that generating data sets with rich host diversity is possible with public data and that key gut microbes associated with mammals are widespread across the animal kingdom. We also show the effects that sample size and taxonomic rank have on comparative gut microbiome studies and that results of multivariate analyses can vary significantly with these two parameters. While challenges remain in developing a universal model of the animal gut microbiome, we show that existing ecological frameworks can help bring us one step closer to integrating the gut microbiome into animal ecology and evolution. [ABSTRACT FROM AUTHOR]

Competing objectives are common in the management of wildlife diseases. However, the extent to which disease mitigation conflicts with other goals has rarely been quantified. Chronic wasting disease (CWD) is a lethal cervid disease widely distributed in North America and recently detected in Europe. After the detection of CWD among reindeer (Rangifer tarandus) in Norway in 2016, intensified and male‐biased harvesting was used to manage CWD, but this may have adverse side effects. Based on extensive surveillance data (2001‒2022) gathered by the Norwegian Institute for Nature Research (NINA) and local management in addition to harvest statistics, we quantified how CWD management in Hardangervidda, Norway, changed harvest rates and affected population size, operational sex ratio, and age structure, and, in turn, whether recruitment, sex ratio of calves, and calving dates were affected. We used a formal reindeer quality standard to define adverse management. The estimated harvest rate of adult males reached >40% annually; however, the population size was only moderately reduced because the harvest of adult females was similar or decreased. The sex ratio changed from approximately 1:2.2 to 1:6.5 (males ≥3 years: females ≥1 year), which brought the population from good to poor quality according to the reindeer quality standard. The proportion of prime‐aged (≥5 years) males among adult males (≥2 years) in the harvest decreased from >60% to approximately 30%. Demographic changes led to limited side effects in the short‐term, with a delay of 4‒5 days in calving dates and a slightly more female‐biased sex ratio among the harvested calves but without a marked change in early recruitment. Wildlife populations are increasingly threatened by severe disease outbreaks that may require intensive management. Our study highlights the importance of extensive surveillance to document the potential adverse effects on population abundance, demography, and demographic side effects. The fairly limited short‐term adverse impacts can be traded against a higher likelihood of future sustainability without severe diseases; however, this may become an issue of concern if the disease becomes endemic. Balancing these trade‐offs would benefit from good communication between veterinary sciences and wildlife ecology experts. [ABSTRACT FROM AUTHOR]

By changing the spatiotemporal availability of resources, tourism-related feeding can have potentially detrimental impacts on the movement ecology of animals, thus possibly undermining its own conservation benefits. A lack of baseline data on natural behaviour and the noninclusion of observation data that adequately incorporates the previous experience of animals with tourism-related feeding have generated contradictory results, causing the true impacts of feeding to remain obscure. Further, the relationship between the energy consumption of fed animals and their space use remains unexplored. Here, we coupled passive acoustic telemetry with previously published observation data at a tourism-related feeding site to investigate how direct feeding affects space use and residency patterns of great hammerhead sharks, Sphyrna mokarran , in Bimini, The Bahamas, at various timescales (ranging from days to 8 years). We first constructed movement models for 28 known fed and naïve sharks (i.e. those that were present at the study site but never attended feeding events) to quantify differences in space use and spatial overlap between those groups. We then compared bait uptake of fed sharks with their space use. Fed sharks showed a marked reduction in space use in response to feeding events and an amplification of these impacts over 5 consecutive years. In contrast, naïve shark space use remained unchanged over the same period. The seasonal residency of fed and naïve great hammerheads remained stable across 8 years, with the sharks leaving the study site during the summer of each year. Our study underscores how the intensification of tourism-related direct feeding progressively alters the space use of apex predators across short and long timescales, with enduring effects on fed animals. Our study further highlights the utility of a naïve animal group for assessing feeding impacts in the absence of baseline data. • Tourism-related feeding reduced short-term local space use of fed sharks. • Long-term amplification of these impacts occurred across 5 years in fed sharks. • Reduction in local space use of fed sharks was independent of bait consumption. • Local space use of naïve sharks was not impacted by tourism-related feeding. • Feeding site residency indices of fed and naïve sharks were stable across 8 years. [ABSTRACT FROM AUTHOR]

Wetlands provide unique habitat functions that benefit society by provisioning food, recreation, and ecosystem sustainability. Warfare affects the habitats of wetland‐dependent reptiles, amphibians, and birds in both positive and negative ways, and opportunities exist to improve the management of wildlife habitat using a warfare ecology framework. Recent events in Ukraine highlight these relationships and provide stimulus to further consider the implications of current events for natural resources. In response, this commentary highlights both degradational and positive impacts of warfare on wetland fauna during the cyclical preparation, active conflict, and recovery phases. For example, the active conflict phase often initiates ecological disturbance regimes that couple large‐scale landscape alteration with the release of chemicals and other materials into wetlands, leading to reduced reproductive potential and population declines in wetland‐dependent species (e.g., amphibians, waterfowl) along with decreased overall wetland biodiversity and habitat quality. In contrast, wetland‐dependent wildlife can benefit from (1) conservation activities occurring on military installations maintained to support training activities and (2) restoration efforts initiated after the cessation of combat. For example, many threatened and endangered reptiles and amphibians find refugia on military lands in the USA and internationally, and international protections for wetland resources (including the Ramsar Convention) have been established to promote their sustainability and wise use. Additional research is needed to improve the protection of valuable wetland resources by further enhancing ongoing conservation and planning efforts and improving strategies to mitigate the negative impacts of warfare on wetland dependent species throughout each phase of the warfare ecology cycle. Integr Environ Assess Manag 2024;20:2153–2161. Published 2023. This article is a US Government work and is in the public domain in the USA. Integrated Environmental Assessment and Management published by Wiley Periodicals LLC on behalf of Society of Environmental Toxicology & Chemistry (SETAC). Key Points: Recent events in Ukraine highlight cyclical relationships between warfare and ecological outcomes in wetlands, and these linkages will become increasingly important as natural threats to the environment and human populations increase under anticipated future climate scenarios.Warfare poses unique challenges to wetland‐dependent species and their habitats, which will be exacerbated under future climate scenarios that disproportionately affect populations near coastal areas and other wetland‐rich landforms.The warfare ecology concept provides the best available framework (preconflict, active conflict, postconflict) to evaluate risks to wetland resources and identify opportunities to improve outcomes through conservation and restoration across each phase.Existing wetland protection conventions could be improved by incorporating specific guidance addressing the direct and indirect impacts of war on wetland species. [ABSTRACT FROM AUTHOR]

Research Highlight: Knutie, S., Bahouth, R., Bertone, M., Webb, C., Mehta, M., Nahom, M., Barta, R., Ghai, S., Love, A., Horan, S., Soldo, A., Cochrane, E., Bartholomew, J., Cowan, E., Bjerke, H., Balenger, S., Butler, M., Cornell, A., Kennedy, A., Rolland, V., Schultz, E., Stanback, M., Taff, C., Albery, G. (2024). Understanding spatiotemporal effects of food supplementation on host–parasite interactions using community‐based science. Journal of Animal Ecology. https://doi.org/10.1111/1365‐2656.14155. Wildlife have become increasingly dependent on anthropogenic food supplementation, resulting in altered nutritional intake and inter‐ and intraspecific interactions. Subsequently, supplemental feeding can affect both the immunological function of individuals and transmission dynamics among individuals and species. The magnitude of the effect supplemental feeding has on disease is likely to vary across time and space with the nutritional demands of hosts. However, the broad temporal or spatial scale effects of supplementation are poorly understood. Recently, Knutie et al. (2024) introduced their citizen science program, the Nest Parasite Community Project, a broadscale coordinated effort by scientists and the public to monitor box nesting wild birds and their ectoparasites across the eastern United States. The authors amassed an impressive 4‐year data set with hundreds of nests spanning the entire US breeding range of Eastern bluebirds (Sialia sialis). In the first study to come from the project, the authors demonstrate that the effects of food supplementation on host–parasite interactions vary across time and space and do not consistently influence host–parasite outcomes, highlighting that host–parasite interactions are often context dependent and influenced by many environmental factors (e.g. weather and habitat quality). The authors also found that supplemental feeding increases host fitness, regardless of parasitism. The study provides strong evidence that citizen science projects can help broaden our understanding of how human food sources influence wildlife disease in various environmental contexts. [ABSTRACT FROM AUTHOR]

All animals exhibit some combination of spatial and social behaviours. A diversity of interactions occurs between such behaviours, producing emergent phenomena at the spatial–social interface. Untangling and interrogating these complex, intertwined processes can be vital for identifying the mechanisms, causes and consequences of behavioural variation in animal ecology. Nevertheless, the integrated study of the interactions between spatial and social phenotypes and environments (at the spatial–social interface) is in its relative infancy. In this theme issue, we present a collection of papers chosen to expand the spatial–social interface along several theoretical, methodological and empirical dimensions. They detail new perspectives, methods, study systems and more, as well as offering roadmaps for applied outputs and detailing exciting new directions for the field to move in the future. In this Introduction, we outline the contents of these papers, placing them in the context of what comes before, and we synthesize a number of takeaways and future directions for the spatial–social interface. This article is part of the theme issue 'The spatial–social interface: a theoretical and empirical integration'. [ABSTRACT FROM AUTHOR]

Animals simultaneously navigate spatial and social environments, and their decision-making with respect to those environments constitutes their spatial (e.g. habitat selection) and social (e.g. conspecific associations) phenotypes. The spatial–social interface is a recently introduced conceptual framework linking these components of spatial and social ecology. The spatial–social interface is inherently scale-dependent, yet it has not been integrated with the rich body of literature on ecological scale. Here, we develop a conceptual connection between the spatial–social interface and ecological scale. We propose three key innovations that incrementally build upon each other. First, the use–availability framework that underpins a large body of literature in behavioural ecology can be used in analogy to the phenotype–environment nomenclature and is transferable across the spatial and social realms. Second, both spatial and social phenotypes are hierarchical, with nested components that are linked via constraints—from the top down—or emergent properties—from the bottom up. Finally, in both the spatial and social realms, the definitions of environment and phenotype depend on the focal scale of inquiry. These conceptual innovations cast our understanding of the relationships between social and spatial dimensions of animal ecology in a new light, allowing a more holistic understanding and clearer hypothesis development for animal behaviour. This article is part of the theme issue 'The spatial–social interface: a theoretical and empirical integration'. [ABSTRACT FROM AUTHOR]

Diet is one of the most important aspects of an animal's ecology, as it reflects direct interactions with other organisms and shapes morphology, behavior, and other life history traits. Modern birds (Neornithes) have a highly efficient and phenotypically plastic digestive system, allowing them to utilize diverse trophic resources, and digestive function has been put forth as a factor in the selectivity of the end-Cretaceous mass extinction, in which only neornithine dinosaurs survived. 1 Although diet is directly documented in several early-diverging avian lineages, 2 only a single specimen preserves evidence of diet in Enantiornithes, the dominant group of terrestrial Cretaceous birds. 3 Morphology-based predictions suggest enantiornithines were faunivores, 4,5,6 although the absence of evidence contrasts with the high preservation potential and relatively longer gut-retention times of these diets. Longipteryx is an unusual Early Cretaceous enantiornithine with an elongate rostrum; distally restricted dentition 7 ; large, recurved, and crenulated teeth 8 ; and tooth enamel much thicker than other paravians. 9 Statistical analysis of rostral length, body size, and tooth morphology predicts Longipteryx was primarily insectivorous. 4,5 Contrasting with these results, two new specimens of Longipteryx preserve gymnosperm seeds within the abdominal cavity interpreted as ingesta. Like Jeholornis , their unmacerated preservation and the absence of gastroliths indicate frugivory. 10 As in Neornithes, 11 complex diets driven by the elevated energetic demands imposed by flight, secondary rostral functions, and phylogenetic influence impede the use of morphological proxies to predict diet in early-diverging avian lineages. • Unusual enantiornithine Longipteryx with an elongate rostrum predicted to be a faunivore • Direct evidence indicates Longipteryx was a frugivore, eating gymnosperm "fruits" • Like crown birds, morphological proxies fail to predict diet in early birds Evidence of diet is rare, so morphological proxies are used to predict diet in fossils. These suggest the unusual enantiornithine bird, Longipteryx , was an insectivore. O'Connor et al. describe direct evidence it was a frugivore, indicating that, as in modern birds, the morphology of the rostrum cannot be used alone to predict diet in Mesozoic birds. [ABSTRACT FROM AUTHOR]

Wildlife abundance and movement are strongly impacted by landscape heterogeneity, especially in cities which are among the world's most heterogeneous landscapes. Nonetheless, current global land cover maps, which are used as a basis for large‐scale spatial ecological modeling, represent urban areas as a single, homogeneous, class. This often requires urban ecologists to rely on geographic resources from local governments, which are not comparable between cities and are not available in underserved countries, limiting the spatial scale at which urban conservation issues can be tackled. The recent expansion of community‐based geographic databases, for example, OpenStreetMap (OSM), represents an opportunity for ecologists to generate large‐scale maps geared toward their specific research needs. However, computational differences in language and format, and the high diversity of information within, limit the access to these data. We provide a framework, using R, to extract geographic features from the OSM database, classify, and integrate them into global land cover maps. The framework includes an exhaustive list of OSM features describing urban and peri‐urban landscapes and is validated by quantifying the completeness of the OSM features characterized, and the accuracy of its final output in 34 cities in North America. We portray its application as the basis for generating landscape variables for ecological analysis by using the OSM‐enhanced map to generate an urbanization index, and subsequently analyze the spatial occupancy of six mammals throughout Chicago, Illinois, USA. The OSM features characterized had high completeness values for impervious land cover classes (50%–100%). The final output, the OSM‐enhance map, provided an 89% accurate representation of the landscape at 30m resolution. The OSM‐derived urbanization index outperformed other global spatial data layers in the spatial occupancy analysis and concurred with previously seen local response trends, whereby lagomorphs and squirrels responded positively to urbanization, while skunks, raccoons, opossums, and deer responded negatively. This study provides a roadmap for ecologists to leverage the fine resolution of open‐source geographic databases and apply it to spatial modeling by generating research‐specific landscape variables. As our occupancy results show, using context‐specific maps can improve modeling outputs and reduce uncertainty, especially when trying to understand anthropogenic impacts on wildlife populations. [ABSTRACT FROM AUTHOR]

The last few years have seen a surge of interest from field ecologists and evolutionary biologists to study neoplasia and cancer in wildlife. This contributes to the One Health Approach, which investigates health issues at the intersection of people, wild and domestic animals, together with their changing environments. Nonetheless, the emerging field of wildlife cancer is currently constrained by methodological limitations in detecting cancer using non‐invasive sampling. In addition, the suspected differential susceptibility and resistance of species to cancer often make the choice of a unique model species difficult for field biologists.Here, we provide an overview of the importance of pursuing the study of cancer in non‐model organisms and we review the currently available methods to detect, measure and quantify cancer in the wild, as well as the methodological limitations to be overcome to develop novel approaches inspired by diagnostic techniques used in human medicine.The methodology we propose here will help understand and hopefully fight this major disease by generating general knowledge about cancer, variation in its rates, tumour‐suppressor mechanisms across species as well as its link to life history and physiological characters. Moreover, this is expected to provide key information about cancer in wildlife, which is a top priority due to the accelerated anthropogenic change in the past decades that might favour cancer progression in wild populations. [ABSTRACT FROM AUTHOR]

Highways are one of the anthropogenic factors that have the greatest impact on terrestrial biodiversity. Barriers, depletion effects, and roads are the most common locations of wild animal roadkill, leading to biodiversity loss in wild vertebrates. However, the corpses of these animals can be used as opportunistic samples, an excellent source of information on topics such as population dynamics, which is one of the aims of road ecology. Nonetheless, there are only a few studies on injuries in roadkilled wild animals. Between 2018 and 2021, road monitoring was performed around three Federal Conservation Units in Brazil. Twenty-four animals, including birds, reptiles, and mammals, were collected. This study aims to characterize the lesions in wild animals that were roadkilled on roads in the Brazilian semi-arid region using necropsy and quantitative computed tomography (QCT). Also, the bone mineral density was measured using QCT and compared with the number of lesions and body condition score. Four types of bone lesions were found in 13 different bones, with an average of 3.25 lesions per bird and 3.75 lesions per reptile and mammal, with no statistical difference between the means (p > 0.05). Providing a database on the main injuries found in wild animals that are frequently roadkilled serves as an aid to wildlife rescue and rehabilitation professionals who contribute to the conservation of species. In addition, the data on road ecology serves as a basis for the implementation of mitigation measures against wildlife roadkills, also contributing to the conservation of species. [ABSTRACT FROM AUTHOR]

Monitoring species distribution and abundance accurately and efficiently are vital for conservation efforts. Next-generation sequencing and DNA metabarcoding using environmental DNA (eDNA) allow for the simultaneous identification of multiple species in one sample, enabling swift biodiversity assessment in complex ecosystems. However, most eDNA studies focus on aquatic organisms and ecosystems.This study's main objective was to use eDNA metabarcoding to monitor mammal and bird species in an urban ecological park. The chosen study site was Gildong Ecological Park, Seoul, South Korea, with a total area of 80,000 m² divided into three marsh area, a forested mountain area, and a rural experience learning center. Water sampling occurred five times from August to September, yielding 65 samples from three park sections. We employed MiMammal and MiBird primers targeting mitochondrial 12 S to investigate mammals and birds, serving as pivotal biological indicators within urban ecosystems.Metabarcoding revealed the presence of 73% (11/15) and 67% (represented 67% of the total 6268 individual) of the dominant mammalian and avian species, respectively, known to inhabit the park, compared to the results of traditional surveys. The mountain samples (1.51) and marsh samples (2.32) had significantly different median read counts when including all species; however, the same comparison within each taxonomic group yielded no statistically significant differences. Though we detected species differences using eDNA across summer, autumn, and winter monitoring, no statistically significant differences were found among seasons within the park. However, the park's area is relatively small for detecting variations in eDNA. This might be because there is a lot of animal activity throughout the study site and/or a limited influence of microhabitats. These results could provide valuable insights for using eDNA to monitor animals in urban ecological parks. [ABSTRACT FROM AUTHOR]

Studying positional behaviors is important for understanding how animals interact with their immediate environment. This is particularly important in arboreal species since arboreal milieus are primarily characterized by three‐dimensional problems that arboreal species must overcome to efficiently access resources. Similarly, a fundamental aspect of an animal's ecology is its daily activity pattern. This information is important for understanding the basic ecology of animal species and their eco‐evolutionary dynamics. This study sought to understand the habitat use and nocturnal lifestyle of the highly arboreal kinkajou (Potos flavus) by documenting variation in positional behaviors and activity patterns using 2223 photographs obtained from 27 camera traps in French Guiana. Data were analyzed using descriptive statistics, Kernel density estimation (KDE), and Gantt charts. Our results indicate that kinkajous show a strictly nocturnal activity pattern beginning from 19:00 h to 05:57 h, with peak active periods between 01:00 h and 02:00 h. The most frequent activities were scanning (48.33%) and traveling (47.13%). Quadrupedal walking (95.43%) was the main locomotor behavior during traveling. However, when crossing gaps between two substrates, kinkajous would either bridge (42.22%), leap (33.33%), or drop (26.67%) across gaps. Inactive periods were characterized by grooming (77.32%) and resting (27.84%) while mostly assuming a sitting (90.67%) or a catlike body curl posture (92.59%), interchangeably. This study highlights the broad array of positional behaviors displayed by kinkajous, further providing information to understand its basic ecology and eco‐evolutionary dynamics. [ABSTRACT FROM AUTHOR]

Analysis of people’s perceptions toward wildlife is fundamental in conservation planning. Also fundamental is dissemination of information about wildlife ecology. In Mexico, conservation of carnivores, who frequently come into conflict with human communities, is of utmost importance. We designed a workshop about the ecological aspects of pumas and jaguars; 232 children in elementary schools in rural, semiurban, and urban zones of Central Mexico participated. We analyzed the children’s knowledge of, perceptions of, and behavior in relation to pumas and jaguars before and after the workshop. We compared the three aspects by separating the data by grade and zone and found positive changes after the workshop. Knowledge was greater in the rural zone, but pro-conservation behavior was higher in the urban zone. Sixth-grade children displayed pro-conservation behavior and had more knowledge and more positive perceptions. We discuss the importance of involving children in conservation projects and disseminating information about large carnivores. [ABSTRACT FROM AUTHOR]

This editorial titled "Restoration of coastal marine ecosystems" discusses the importance of ecosystem restoration in coastal marine habitats and the goals set by the United Nations to protect and restore degraded ecosystems. It highlights the challenges and uncertainties associated with large-scale restoration efforts in marine ecosystems and presents new insights and achievements in marine ecosystem restoration. The document covers various topics and ecosystems, including seagrass beds, macroalgal forests, estuarine wetlands, oyster reefs, and coral reefs, and provides successful restoration case studies. The article emphasizes the importance of stakeholder involvement, long-term monitoring, and measures to improve the resilience of restored ecosystems in the face of climate change. It concludes by calling for intensified and scaled-up restoration efforts, supported by government actions and partnerships with commercial and industrial sectors. [Extracted from the article]

Wildlife tagging provides critical insights into animal movement ecology, physiology, and behavior amid global ecosystem changes. However, the stress induced by capture, handling, and tagging can impact post-release locomotion and activity and, consequently, the interpretation of study results. Here, we analyze post-tagging effects on 1585 individuals of 42 terrestrial mammal species using collar-collected GPS and accelerometer data. Species-specific displacements and overall dynamic body acceleration, as a proxy for activity, were assessed over 20 days post-release to quantify disturbance intensity, recovery duration, and speed. Differences were evaluated, considering species-specific traits and the human footprint of the study region. Over 70% of the analyzed species exhibited significant behavioral changes following collaring events. Herbivores traveled farther with variable activity reactions, while omnivores and carnivores were initially less active and mobile. Recovery duration proved brief, with alterations diminishing within 4–7 tracking days for most species. Herbivores, particularly males, showed quicker displacement recovery (4 days) but slower activity recovery (7 days). Individuals in high human footprint areas displayed faster recovery, indicating adaptation to human disturbance. Our findings emphasize the necessity of extending tracking periods beyond 1 week and particular caution in remote study areas or herbivore-focused research, specifically in smaller mammals. In wildlife tagging, stress from capture and handling can alter post- release behavior and potentially study interpretations. This study of 42 mammal species shows that these effects diminish within 4–7 days, and quicker for animals in high human activity areas indicating adaptation to disturbance. [ABSTRACT FROM AUTHOR]

The focus of the present study was on arcturid isopods occurring in the subarctic region around Iceland. Data from two decades of sampling with an epibenthic sledge (EBS) during numerous expeditions of the BIOICE (Benthic Invertebrates of Icelandic Waters; 1992–2004) and IceAGE (Icelandic marine Animals: Genetics and Ecology; 2011—ongoing) projects were incorporated into an integrative taxonomy approach. This approach linked distribution records, morphological and molecular examinations, with video and image data observed during recent expeditions in 2018 (MSM75) and 2020 (SO276) using the Remotely Operated Vehicles (ROVs) PHOCA and Kiel 6000 from GEOMAR. The resulting dataset from 120 sampling locations included 6852 specimens, a large percentage of which were fixed in formalin during BIOICE. Ethanol‐fixed specimens collected during IceAGE were used to link morphotypes with haplotypes and occurrence locations, focusing on the coral association of the genus Astacilla Cordiner, 1793. The IceAGE sampling was complemented by ROV image and video data and noninvasive sampling, making it possible to obtain pictures of living specimens of A. longicornis. The species A. longicornis Sowerby, 1806 showed a distribution linked to cold‐water occurrence and was sampled from Paramuricea placomus. Astacilla boreaphilis Stranky & Svavarsson, 2006, occurring only south of Iceland, showed high morphological variation in the spine pattern of adult females, while the molecular results indicated no clear pattern of potentially ongoing species radiation or cryptic species. Astacilla granulata was exclusively found north of Iceland. Thus, the species' distribution is potentially influenced by the Greenland‐Faroe Ridge, which separates the North Atlantic from the Arctic Ocean. [ABSTRACT FROM AUTHOR]

This article examines the impact of different rodent communities on seed dispersal in desert areas. The study focuses on three rodent species in Inner Mongolia, China, and analyzes their seed predation and hoarding behaviors. The researchers found that each rodent community disperses seeds differently, and the selection and use of plant seeds vary among the communities. The study emphasizes the importance of considering seed traits and differences in seed preferences among rodent species in understanding seed dispersal. The findings suggest that the collective effect of seed dispersal by multiple rodent species contributes to the distribution of vegetation in desert regions. The article discusses the interactions between rodents and plants, highlighting the significance of these interactions for conservation and ecosystem management. [Extracted from the article]

Research Highlight: Bourbour et al., 2024. Feeding en route: Prey availability and traits influence prey selection by an avian predator on migration. Journal of Animal Ecology. Diet selection plays a key role in the eco‐evolutionary dynamics of animals, exhibiting substantial variability across species, environments and seasons. The complex interplay between movement capability, hunting strategies, habitat use, prey traits and availability shapes the foraging patterns of avian predators. However, detailed information on how these birds exploit their extensive territories remains limited. In this study, Bourbour et al. utilised a novel integration of eDNA metabarcoding and citizen science to explore predator–prey interactions between migrating sharp‐shinned hawks (Accipiter striatus) and an ephemeral avian prey community along North America's Pacific flyway. The research identified 1396 detections from the diet (65 species) of 588 migrating sharp‐shinned hawks. Hawks' diet composition correlated with prey abundance indices sourced from the eBird database throughout the migration season, highlighting the significant impact of prey availability—shaped by migration tendency, flocking behaviour, and habitat—on raptor‐songbird interactions. Notably, the study also found significant differences in prey size between male and female hawks, indicating that sexual dimorphism has led to diverse foraging strategies during migration. These findings underscore the potential of combining eDNA metabarcoding with citizen science to deepen our understanding of the foraging ecology of highly mobile and wide‐ranging birds, as well as to monitor complex and vast ecosystems. [ABSTRACT FROM AUTHOR]

During animal migration, ephemeral communities of taxa at all trophic levels co‐occur over space and time. The interactions between predators and prey along migration corridors are ecologically and evolutionarily significant. However, these interactions remain understudied in terrestrial systems and warrant further investigations using novel approaches.We investigated the predator–prey interactions between a migrating avivorous predator and ephemeral avian prey community in the fall migration season. We tested for associations between avian traits and prey selection and hypothesized that prey traits (i.e. relative size, flocking behaviour, habitat, migration tendency and availability) would influence prey selection by a sexually dimorphic raptor on migration.To document prey consumption, we sampled trace prey DNA from beaks and talons of migrating sharp‐shinned hawks Accipiter striatus (n = 588). We determined prey availability in the ephemeral avian community by extracting weekly abundance indices from eBird Status and Trends data. We used discrete choice models to assess prey selection and visualized the frequency of prey in diet and availability on the landscape over the fall migration season.Using eDNA metabarcoding, we detected prey species on 94.1% of the hawks sampled (n = 525/588) comprising 1396 prey species detections from 65 prey species. Prey frequency in diet and eBird relative abundance of prey species were correlated over the migration season for top‐selected prey species, suggesting prey availability is an important component of raptor‐songbird interactions during fall. Prey size, flocking behaviour and non‐breeding habitat association were prey traits that significantly influenced predator choice. We found differences between female and male hawk prey selection, suggesting that sexual size dimorphism has led to distinct foraging strategies on migration.This research integrated field data collected by a volunteer‐powered raptor migration monitoring station and public‐generated data from eBird to reveal elusive predator–prey dynamics occurring in an ephemeral raptor‐songbird community during fall migration. Understanding dynamic raptor‐songbird interactions along migration routes remains a relatively unexplored frontier in animal ecology and is necessary for the conservation and management efforts of migratory and resident communities. [ABSTRACT FROM AUTHOR]

The article "Reframing African ecology: Challenging bias and celebrating contribution" discusses the bias and marginalization faced by African ecological studies in Western discourse and scientific research. It highlights the rich scientific heritage of African ecosystems and the contributions of both native and foreign scientists. The article emphasizes the need for collaborative efforts and inclusive scholarship to challenge biases and elevate African ecological research on a global scale. It also explores the significant role of African ecology in shaping our understanding of ecological processes, conservation biology, and other scientific disciplines. The article provides examples of groundbreaking research in Africa, such as Dr. Christiaan N. Barnard's heart transplant and Louis Leakey's work in paleoanthropology. It also discusses the contributions of African ecosystems to evolutionary biology, genetics, and conservation science. The article concludes by calling for a more transparent and open discussion in journals like the African Journal of Ecology to promote and recognize African talent in the international scientific community. The article discusses the importance of African ecological research in understanding various topics such as predation, population dynamics, optimal foraging theory, resource stoichiometry, and the composition of food webs. It also highlights the significance of studying bushmeat and its impact on conservation, public health, and local communities. The emergence of zoonotic diseases like Ebola and COVID-19 has further emphasized the need for interdisciplinary research in wildlife ecology, epidemiology, and socio-cultural studies. The article acknowledges the challenges faced in conducting ecological research in Africa, including logistical [Extracted from the article]

More than 240 species of snake have been described from Thailand, yet basic natural history and ecology for this group of animals remains scarce in human disturbed environments despite conservation and human medical significance of them in these habitats. We studied snake diversity at Walailak University from March to December 2023, the largest university campus in Thailand (1525 hectares) through standardized walking surveys, opportunistic notifications and observation, road surveys, and traps and evaluated diversity using the Shannon diversity index (H), Pielou's evenness of species (J), detection probabilities (p), and occupancy probabilities (ψ). We observed 195 snakes (21 species, 7 families) at Walailak University and overall snake diversity (H = 2.60) and evenness (J = 0.85) were quite high, although specific site diversity (range H = 0–1.94) and evenness (range J = 0.67–0.91) within the university were variable. The probability of detecting snakes (range p =.10–.40) increased with increasing humidity and decreased with increasing amount of rain, temperature, and wind; site occupancy probability decreased with increased canopy height and increased with increased distance to buildings, increased canopy height loss, increased distance to roads, and increased distance to water. Our findings of relatively high snake diversity, presence of snake species potentially dangerous to humans (six species), and protected snake species (Thailand WARPA and international CITES, five species) suggest significant potential for conservation and further research at Walailak University and other campuses in Thailand. [ABSTRACT FROM AUTHOR]

Aggregations and social interactions play an important role in the movement ecology of many animals, including elasmobranchs. Several of these species have shown the capability of carrying out complex social behaviours, and the importance of sociality in this taxon is being realized. Although it is a growing field of study in the case of these organisms, these processes still need to be better understood, especially to support management and conservation policies. In this study, a long-term acoustic telemetry data set collected on Dasyatis pastinaca in a coastal marine protected area was analysed. A co-occurrence network analysis was done to investigate preferential associations among individuals, revealing non-random associations among them. The analysis revealed a few strong and consistent associations that were maintained across inter-migratory periods, as this species performs seasonal migrations to a nearby estuary, suggesting temporal stability of the observed associations. Moreover, individuals had similar average positions and a generally high overlap of space use in both periods, indicating some level of site fidelity to the fully protected area. Groups of up to 64% of tagged individuals were co-detected at a same receiver, particularly in the western side of the array. Despite our limited sample size, likely underestimating associations, these results show that in addition to their large-scale movement pattern, D. pastinaca is likely to also present active partner preference and spatial structure at a finer spatial scale. The nature of such results is relevant to support the protection of these species. [ABSTRACT FROM AUTHOR]

Aim: We aim to find the main drivers of the taxonomic and functional richness and functional dispersion of vertebrates (amphibians, birds, primates, marsupials, rodents, bats and medium‐ and large‐sized mammals) across the Brazilian Atlantic Forest. We also aim to identify hotspots of vertebrate diversity and quantify the extent to which they are legally protected. Location: Brazilian Atlantic Forest. Methods: We gathered data on the occurrence of vertebrates based on the most recent published databases for Atlantic Forest vertebrates and measured taxonomic richness, functional richness and functional dispersion. We then related variation in diversity, within each group and overall, to environmental and landscape variables. Also, we modelled the diversity of each group for the entire extent of the Atlantic Forest, superimposing the diversity maps to delimit the vertebrate biodiversity hotspots and verified how much of these hotspots are covered by protected areas. Results: Taxonomic/functional diversity were driven by environmental (e.g., average annual precipitation and precipitation of the driest quarter) and landscape variables (e.g., amount of forest and agricultural areas) for most taxonomic groups. The main hotspots of taxonomic richness are located in the central region of the Atlantic Forest, whereas those for functional diversity occur in the southern region of the biome. Only a little over 10% of the Atlantic Forest is covered by protected areas, and, as such, the vast majority of the medium and high diversity areas fall outside of protected areas, being therefore not legally protected. Main Conclusions: We found evidence for previously described patterns, including the predicted positive effects of the amount of forest in the landscape and precipitation and the negative effects of agricultural areas on vertebrate diversity. Finally, our results show that most diversity hotspots are outside of legally protected areas, indicating that more conservation efforts should be made towards safeguarding these important areas. [ABSTRACT FROM AUTHOR]

• Ecology of urban wild mammals is studied twice as often as human dimensions. • Canids and murids are the most studied taxonomic families. • Human dimensions research is dominated by a conflict narrative. • Sound planning policy for biophilic future cities requires more interdisciplinary research. • We propose a research agenda for future research on urban wild mammals. Future cities have the potential to be biodiverse areas in which humans and wildlife can coexist. However, the success of creating or maintaining wildlife-inclusive future cities can be challenged by management actions that are solely based on ecological research, while overlooking research on human perspectives. Despite the growth of literature on human-wildlife interactions, which complements the breadth of urban ecology research, the overlap between these two research areas is still uncommon. In this study, we reviewed the literature of wild mammals in urban areas to identify patterns and gaps in the literature. We found 848 published journal articles, of which 480 articles focused on wildlife ecology, 269 articles focused on human dimensions and 99 articles had interdisciplinary combinations of both. Ecology-centered publications tended to be about habitat, rather than behavior, diet, health, reproduction and inter-species-relations, and literature on human dimensions was more evenly divided into management, perception, conflict and coexistence. Most ecology studies reported on specific taxonomic families, mainly canids and murids, but in human-dimension studies, "wildlife" was considered more as a general community of species. The most studied interdisciplinary combination of research themes was wildlife habitat and human-wildlife conflicts (n = 22), while only nine studies incorporated perception with ecological research. Even though studies on human dimensions of wildlife in cities are increasing, interdisciplinary research is lacking, which limits the knowledge on how to manage and shape urban areas to achieve coexistence of humans and wild mammals. For future cities to successfully become biophilic and support human-wildlife coexistence, we outlined five key elements for a research agenda: 1) Investigate urban mammal research through an interdisciplinary lens; 2) Explore ecological dynamics beyond habitat selection; 3) Conduct research for coexistence; 4) Disentangle what is "urban wildlife"; 5) Study a diverse array of urban wild mammals. [Display omitted] [ABSTRACT FROM AUTHOR]

Background: Bioacoustic monitoring is an effective and minimally invasive method to study wildlife ecology. However, even the state-of-the-art techniques for analyzing birdsongs decrease in accuracy in the presence of extraneous signals such as anthropogenic noise and vocalizations of non-target species. Deep supervised source separation (DSSS) algorithms have been shown to effectively separate mixtures of animal vocalizations. However, in practice, recording sites also have site-specific variations and unique background audio that need to be removed, warranting the need for site-specific data. Methods: Here, we test the potential of training DSSS models on site-specific bird vocalizations and background audio. We used a semiautomated workflow using deep supervised classification and statistical cleaning to label and generate a site-specific source separation dataset by mixing birdsongs and background audio segments. Then, we trained a deep supervised source separation (DSSS) model with this generated dataset. Because most data is passively-recorded and consequently noisy, the true isolated birdsongs are unavailable which makes evaluation challenging. Therefore, in addition to using traditional source separation (SS) metrics, we also show the effectiveness of our site-specific approach using metrics commonly used in ornithological analyses such as automated feature labeling and species-specific trilateration accuracy. Results: Our approach of training on site-specific data boosts the source-to-distortion, source-to-interference, and source-to-artifact ratios (SDR, SIR, and SAR) by 9.33 dB, 24.07 dB, and 3.60 dB respectively. We also find our approach allows for automated feature labeling with single-digit mean absolute percent error and birdsong trilateration accuracy with a mean simulated trilateration error of 2.58 m. Conclusion: Overall, we show that site-specific DSSS is a promising upstream solution for wildlife audio analysis tools that break down in the presence of background noise. By training on site-specific data, our method is robust to unique, site-specific interference that caused previous methods to fail. [ABSTRACT FROM AUTHOR]

Predators impose top‐down forces on prey populations, with the strength of those effects often varying over space and time and among demographic groups. In ungulates, predation risk is typically greatest for neonatal offspring, with some suggesting that predators can key in on adult activity to locate hidden neonates. However, few field studies to date have been able to directly assess the influence of maternal care on ungulate neonate survival. Using a population of white‐tailed deer under heavy coyote predation pressure, we tested the maternal dispersion hypothesis, which suggests the dispersion of maternal activity temporally and spatially attenuates risk of predation for ungulate neonates during this vulnerable altricial phase. We compared support for this hypothesis with more commonly tested hypotheses regarding the influence of habitat conditions and intrinsic factors on neonatal survival. Fawn survival to 16 weeks was 27.7%, with coyotes accounting for 59% of fawn mortalities. In support of our maternal temporal diffusion hypothesis, we found that neonatal survival decreased as more maternal visits (proportionally) occurred at night. The only other significant (p <.1) predictor of fawn survival was birth timing, with fawn survival decreasing as the season progressed. Given that fawn survival declined as the proportion of nighttime visits increased, and that wild pig presence and human disturbance can push doe and fawn activity toward nocturnal hours, additional research is needed to determine whether managing pig and human disturbance can decrease fawn mortality. More broadly, given the importance of recruitment in ungulate population dynamics, our finding opens a potentially important new line of inquiry on how maternal behaviors influence predation risk in large animal predator–prey ecology. [ABSTRACT FROM AUTHOR]

The spatial ecology of animals is influenced by the structure of their physical habitat, which affects the availability of refuges and microclimate, as well as the spatial positioning of resources. The use of space by the lizard Liolaemus tandiliensis was investigated in the Tandilia mountains of the Pampas region. We radio-tracked 19 adult lizards and found that home range size and distance moved were significantly affected by sex, with males having a home range 34% larger and moving longer distances than females. These parameters were also influenced by structural and thermal features of specific microhabitat types. The habitat structure inside the home range showed relatively high coverage of rocks and low coverage of vegetation. The thermal properties of the microhabitats were strongly associated with their occupancy; individuals used microhabitats of high thermal quality that exhibited environmental temperatures deviating the least from the preferred body temperature range of L. tandiliensis. Small-scale structural heterogeneity and thermal gradients were available in the Tandilia mountains, so L. tandiliensis individuals may not need to move large distances and may sustain themselves within a relatively small home range (mean=74.52 m2). Our findings suggest that L. tandiliensis occurs in a delicate balance with its specific habitat. This study provides information that must be taken into account for conservation planning, especially in light of the increasing anthropogenic degradation of the Tandilia mountains. [ABSTRACT FROM AUTHOR]

Traditional Ecological Knowledge (TEK), described as the relationship between Indigenous peoples and the ecosystem, has always been part of Indigenous communities and their daily lives; however, TEK has progressively been incorporated into the academic and professional field of North American wildlife management and ecology despite its historical domination by Western scientific attitudes, knowledge, and methods. The objective of this note is to provide an overview of such progression from the standpoint of the first author, an Indigenous professional trained in a Western scientific paradigm. More specifically, the paper categorizes the history and the current state of TEK in the wildlife management profession while providing insights for the future of the field. [ABSTRACT FROM AUTHOR]

The amount of semi‐natural habitat surrounding farm fields is a common but inconsistent predictor of natural enemy populations and predation services. Standard land cover metrics may not accurately capture the actual availability of limiting resources for natural enemies and can miss important dynamics across space and time. Theory from animal movement and landscape ecology predicts that regions with more, spatio‐temporally continuous resources (i.e. food and shelter) should have larger predator populations and enhanced biological control.To test these predictions empirically, we designed a study measuring aphids, lady beetles and predation services in agricultural landscapes in Wisconsin, USA. In two study years, we sampled lady beetles and aphids in 336 crop fields (corn, soybean, alfalfa and small grains) and adjacent semi‐natural habitat patches (grasslands and woodlands) across 24 1.5 km buffer landscapes at four to seven time points each, and in 1 year, we assessed predation rates with sentinel egg cards. We used aphid counts to model habitat‐specific aphid phenologies, from which we calculated landscape indices of prey amount and continuity. These indices, along with semi‐natural habitat area, were used to predict lady beetle abundance.While there were strong differences in the abundance and timing of aphids by habitat, semi‐natural habitat amount was still a better predictor of lady beetle counts and sentinel egg predation than either aphid amount or continuity indices in these landscapes.Synthesis and applications. Our findings confirm the robust relationship between lady beetles and semi‐natural habitat in agricultural landscapes, and highlight the complexities of measuring fine‐scale resource heterogeneity in real landscapes. Retaining or adding woodland and grassland patches in agricultural landscapes is likely to support larger lady beetle populations and enhance predation in crop fields. Our results suggest that these habitats may be more important for shelter than prey continuity, though this mechanism warrants further investigation. Future work should continue to refine experimental methods for the successful integration of landscape ecology and animal behaviour to support conservation goals. [ABSTRACT FROM AUTHOR]

The spatial use of habitat is key to understanding the ecology of animals and their area requirements. In the current study, the locations of 11 wild pale-throated three-toed sloths (Bradypus tridactylus) were tracked using GPS loggers across 92 days in a 776 ha forest fragment in the central Amazon. Although male home ranges were slightly smaller than those of females, there were no significant differences in size or its expansion patterns. For nine of 11 individuals, home range size reached a plateau within 45 days of study start, indicating that 45 days can be the basal minimum days to establish the home range size of B. tridactylus. There was a negative relationship between body mass and home range size in our study. This counterintuitive result may be caused by disparities in the food-exploring abilities between individuals. Smaller and presumably younger individuals, who have less experience, may require more time and a larger area in which to search for food, while older and more experienced individuals may be able to find food efficiently in a smaller area. Further work on the distribution of food plants and the food-exploring pattern of each animal in relation to age and/or size is thus encouraged. [ABSTRACT FROM AUTHOR]

Host microbial communities (hereafter, the 'microbiome') are recognized as an important aspect of host health and are gaining attention as a useful biomarker to understand the ecology and demographics of wildlife populations. Several studies indicate that the microbiome may contribute to the adaptive capacity of animals to changing environments associated with increasing habitat fragmentation and rapid climate change. To this end, we investigated the gut microbiome of pronghorn (Antilocapra americana), an iconic species in an environment that is undergoing both climatic and anthropogenic change. The bacterial composition of the pronghorn gut microbiome has yet to be described in the literature, and thus our study provides important baseline information about this species. We used 16S rRNA amplicon sequencing of fecal samples to characterize the gut microbiome of pronghorn—a facultative sagebrush (Artemisia spp.) specialist in many regions where they occur in western North America. We collected fecal pellets from 159 captured female pronghorn from four herds in the Red Desert of Wyoming during winters of 2013 and 2014. We found small, but significant differences in diversity of the gut microbiome relative to study area, capture period, and body fat measurements. In addition, we found a difference in gut microbiome composition in pronghorn across two regions separated by Interstate 80. Results indicated that the fecal microbiome may be a potential biomarker for the spatial ecology of free-ranging ungulates. The core gut microbiome of these animals—including bacteria in the phyla Firmicutes (now Bacillota) and Bacteroidota—remained relatively stable across populations and biological metrics. These findings provide a baseline for the gut microbiome of pronghorn that could potentially be used as a target in monitoring health and population structure of pronghorn relative to habitat fragmentation, climate change, and management practices. [ABSTRACT FROM AUTHOR]

Benthic amphipod feeding groups are a well-established trophic classification that is mostly based on field observations and laboratory tests and are used in ecological studies to monitor the ecological state of benthic ecosystems. Globally, carbon and nitrogen stable isotope ratio investigations have provided confirmation of, and novel insights into, the trophic ecology of benthic animals, such as polychaetes. However, stable isotopic examinations of benthic amphipods have been limited. Here, we used microgram samples to compare the species-specific dietary sources, trophic positions, and isotopic niche overlap of selected benthic amphipods from the Gulf of Kachchh, Marine National Park, using elemental analyser-isotopic ratio mass spectrometry (EA-IRMS) of carbon and nitrogen. Overall, all primary carbon sources presented wide variation in the isotopic values of δ13C (6.3‰) and δ15N (greater than 13‰). Conversely, the amphipod taxa displayed relatively narrow range for δ13C (3.9‰) and wider range for δ15N (more than 10‰). The results of the Bayesian mixing model revealed that the benthic amphipods had species-specific feeding preferences. However, the predominant carbon source was organic matter in sediment which reinforced benthic pathways for energy flow for most species. According to the estimated trophic level values (1.62–3.39), these species play a significant role as primary and secondary consumers serving as crucial trophic intermediaries in the food chain, connecting the base to the top consumers. High overlapping ecological niche amongst species was detected by SIBER analysis which indicated co-existence of the benthic amphipods in their respective microhabitats. This signifies wider utilisation of resources and inter-specific feeding preferences with minimal competition amongst amphipod species. [ABSTRACT FROM AUTHOR]

This literature review study focuses on canine leptospirosis with the purpose of evaluating the relationship between precipitation and leptospirosis, identifying the most affected region and justifying additional studies through a meta-analysis. The methodology includes the analysis of the relationship between precipitation and cases of leptospirosis (1994-2013), the exploration of the incidence by region in Ecuador through correspondence analysis and a global meta-analysis of the interaction between environmental factors of 106 articles from different databases. The results show a significant exponential relationship between leptospirosis and precipitation in Ecuador, highlighting the importance of climatic conditions in risk assessment. The coastal region, especially Manabí, is the most affected, with a solid association between leptospirosis and several hosts (dogs, pigs, rats and multiple animals). The meta-analysis highlights the importance of factors such as floods, soils and rainfall events, which account for 52.4% of the variation in the literature analyzed. In contrast, other elements lack relevance, indicating the need to prioritize specific research and strategies. In conclusion, a comprehensive view of canine leptospirosis is provided, highlighting the importance of climatic and environmental factors to develop effective prevention and control strategies in Ecuador. [ABSTRACT FROM AUTHOR]

Dimensions of body size are an important measurement in animal ecology, although they can be difficult to obtain due to the effort and cost associated with the invasive nature of these measurements. We avoid these limitations by using camera trap images to derive dimensions of animal size. To obtain measurements of object dimensions using this method, the size of the object in pixels, the focal length of the camera, and the distance to that object must be known. We describe a novel approach of obtaining the distance to the object through the creation of a portable distance marker, which, when photographed, creates a "reference image" to determine the position of the animal within an image. This method allows for the retrospective analysis of existing datasets and eliminates the need for permanent in‐field distance markers. We tested the accuracy of this methodology under controlled conditions with objects of known size resembling Felis catus, our study species, validating the legitimacy of our method of size estimation. We then apply our method to measure feral cat body size using images collected in Tasmania, Australia. The precision of our methodology was evaluated by comparing size estimates across individual cats, revealing consistent and reliable results. The average height (front paw to shoulder) of the feral cats sampled was 25.25 cm (CI = 24.4, 26.1) and the average length (base of tail to nose) was 47.48 cm (CI = 46.0, 48.9), suggesting wild feral cats in our study area are no larger than their domestic counterparts. Given the success of its application within our study, we call for further trails with this method across a variety of species. [ABSTRACT FROM AUTHOR]

Generalized linear models (GLMs) are an integral tool in ecology. Like general linear models, GLMs assume linearity, which entails a linear relationship between independent and dependent variables. However, because this assumption acts on the link rather than the natural scale in GLMs, it is more easily overlooked. We reviewed recent ecological literature to quantify the use of linearity. We then used two case studies to confront the linearity assumption via two GLMs fit to empirical data. In the first case study we compared GLMs to generalized additive models (GAMs) fit to mammal relative abundance data. In the second case study we tested for linearity in occupancy models using passerine point‐count data. We reviewed 162 studies published in the last 5 years in five leading ecology journals and found less than 15% reported testing for linearity. These studies used transformations and GAMs more often than they reported a linearity test. In the first case study, GAMs strongly out‐performed GLMs as measured by AIC in modeling relative abundance, and GAMs helped uncover nonlinear responses of carnivore species to landscape development. In the second case study, 14% of species‐specific models failed a formal statistical test for linearity. We also found that differences between linear and nonlinear (i.e., those with a transformed independent variable) model predictions were similar for some species but not for others, with implications for inference and conservation decision‐making. Our review suggests that reporting tests for linearity are rare in recent studies employing GLMs. Our case studies show how formally comparing models that allow for nonlinear relationships between the dependent and independent variables has the potential to impact inference, generate new hypotheses, and alter conservation implications. We conclude by suggesting that ecological studies report tests for linearity and use formal methods to address linearity assumption violations in GLMs. [ABSTRACT FROM AUTHOR]

The optimal foraging algorithm (OFA) is a swarm-based algorithm motivated by animal behavioral ecology theory. When solving complex optimization problems characterized by multiple peaks, OFA is easy to get trapped in local minima and encounters slow convergence. Therefore, this paper presents an improved optimal foraging algorithm with social behavior based on quasi-opposition (QOS-OFA) to address these problems. First, quasi-opposition-based learning (QOBL) is introduced to improve the overall quality of the population in the initialization phase. Second, an efficient cosine-based scale factor is designed to accelerate the exploration of the search space. Third, a new search strategy with social behavior is designed to enhance local exploitation. The cosine-based scale factor is used as a regulator to achieve a balance between global exploration and local exploitation. The proposed QOS-OFA is compared with seven meta-heuristic algorithms on a CEC benchmark test suite and three real-world optimization problems. The experimental results show that QOS-OFA is better than other competitors on most of the test problems. [ABSTRACT FROM AUTHOR]

Phenolics, like tannins, are plant‐specialized metabolites that play a protective role against herbivory. Tannins can reduce palatability and bind with proteins to reduce digestibility, acting as deterrents to feeding and impacting nutrient extraction by herbivores. Some assays measure tannin and total phenolics content in plants but lack determination of their biological effects, hindering the interpretation of tannin function in herbivory and its impacts on animal behavior and ecology. In this study, we successfully applied the radial diffusion assay to assess tannin protein precipitation (PP) capacity and evaluate the anti‐nutritional effects of tannins in food plants (n = 24) consumed by free‐ranging black howler monkeys (Alouatta pigra) in Tabasco, Mexico. We found PP rings in five plant species consumed by the monkeys. The mature fruit of Inga edulis was the most consumed food plant, despite having a high tannin PP capacity (56.66 mg tannic acid equivalent/g dry matter). These findings highlight the presence of tannins in the black howler diet and provide insight into the primates' resilience and potential strategies for coping with anti‐nutritional aspects of the diet. Highlights: This study highlights the complex dynamics of tannins in the diet of black howlers, revealing a nuanced relationship between tannins, feeding patterns, and potential physiological benefits. The research employs a multifaceted approach, including tannin precipitation assays, to unravel the intricate interplay of these compounds in primate ecology and nutrition. [ABSTRACT FROM AUTHOR]

Ongoing technological advances have led to a rapid increase in the number, type and scope of animal‐tracking studies. In response, many software tools have been developed to analyse animal movement data. These tools generally focus on movement modelling, but the steps required to clean raw data files from different tracking devices have been largely ignored. Such pre‐processing steps are often time‐consuming and involve a steep learning curve but are crucial for the creation of high‐quality, standardised and shareable data. Moreover, decisions made at this early stage can substantially influence subsequent analyses, and in the current age of reproducibility crisis, the transparency of this process is vital.Here we present an open‐access, reproducible toolkit written in the programming language R for processing raw data files into a single cleaned data set for analyses and upload to online tracking databases (found here: https://github.com/ExMove/ExMove). The toolkit comprises well‐documented and flexible code to facilitate data processing and user understanding, both of which can increase user confidence and improve the uptake of sharing open and reproducible code. Additionally, we provide an overview website (found here: https://exmove.github.io/) and a Shiny app to help users visualise tracking data and assist with parameter determination during data cleaning.The toolkit is generalisable to different data formats and device types, uses modern 'tidy coding' practices, and relies on a few well‐maintained packages. Among these, we perform spatial manipulations using the package sf.Overall, by collating all required steps from data collection to archiving on open access databases into a single, robust pipeline, our toolkit provides a valuable resource for anyone conducting animal movement analyses and represents an important step towards increased standardisation and reproducibility in animal movement ecology. [ABSTRACT FROM AUTHOR]

Growing understanding of decision‐making and environmental science is essential to carry out a successful wetland renewal. To foster this understanding and integrate knowledge on wetland renewal, we convened a diverse group of researchers, policymakers, and practitioners at an online symposium held on 23 November 2021. Following the symposium, we curated 22 papers from a global community of wetland experts for the special feature on "Wetland Renewal" in Restoration Ecology. This special feature encompasses findings from 15 field‐based experiments and 7 data‐based papers (P). The research spans various scientific fields such as: Biodiversity Conservation (P15), Coastal Engineering (P4, P8, and P9), Plant Ecology (P1, P2, P10, P12, and P13), Invasion Ecology (P7), Social Science (P3), Peat Soil Science (P6), Wildlife Ecology (P5, P11, and P22), Ecological Modeling (P16, P17, P18, P19, and P20), Microbiology (P22), and Policy and Law (P21). [ABSTRACT FROM AUTHOR]

Background: Tracking the spread of antibiotic resistant bacteria is critical to reduce global morbidity and mortality associated with human and animal infections. There is a need to understand the role that wild animals in maintenance and transfer of antibiotic resistance genes (ARGs). Methods: This study used metagenomics to identify and compare the abundance of bacterial species and ARGs detected in the gut microbiomes from sympatric humans and wild mouse lemurs in a forest-dominated, roadless region of Madagascar near Ranomafana National Park. We examined the contribution of human geographic location toward differences in ARG abundance and compared the genomic similarity of ARGs between host source microbiomes. Results: Alpha and beta diversity of species and ARGs between host sources were distinct but maintained a similar number of detectable ARG alleles. Humans were differentially more abundant for four distinct tetracycline resistance-associated genes compared to lemurs. There was no significant difference in human ARG diversity from different locations. Human and lemur microbiomes shared 14 distinct ARGs with highly conserved in nucleotide identity. Synteny of ARG-associated assemblies revealed a distinct multidrug-resistant gene cassette carrying dfrA1 and aadA1 present in human and lemur microbiomes without evidence of geographic overlap, suggesting that these resistance genes could be widespread in this ecosystem. Further investigation into intermediary processes that maintain drug-resistant bacteria in wildlife settings is needed. [ABSTRACT FROM AUTHOR]

Site occupancy models (SOMs) are a common tool for studying the spatial ecology of wildlife. When observational data are collected using passive monitoring field methods, including camera traps or autonomous recorders, detections of animals may be temporally autocorrelated, leading to biased estimates and incorrectly quantified uncertainty. We presently lack clear guidance for understanding and mitigating the consequences of temporal autocorrelation when estimating occupancy models with camera trap data.We use simulations to explore when and how autocorrelation gives rise to biased or overconfident estimates of occupancy. We explore the impact of sampling design and biological conditions on model performance in the presence of autocorrelation, investigate the usefulness of several techniques for identifying and mitigating bias and compare performance of the SOM to a model that explicitly estimates autocorrelation. We also conduct a case study using detections of 22 North American mammals.We show that a join count goodness‐of‐fit test previously proposed for identifying clustered detections is effective for detecting autocorrelation across a range of conditions. We find that strong bias occurs in the estimated occupancy intercept when survey durations are short and detection rates are low. We provide a reference table for assessing the degree of bias to be expected under all conditions. We further find that discretizing data with larger windows decreases the magnitude of bias introduced by autocorrelation. In our case study, we find that detections of most species are autocorrelated and demonstrate how larger detection windows might mitigate the resulting bias.Our findings suggest that autocorrelation is likely widespread in camera trap data and that many previous studies of occupancy based on camera trap data may have systematically underestimated occupancy probabilities. Moving forward, we recommend that ecologists estimating occupancy from camera trap data use the join count goodness‐of‐fit test to determine whether autocorrelation is present in their data. If it is, SOMs should use large detection windows to mitigate bias and more accurately quantify uncertainty in occupancy model parameters. Ecologists should not use gaps between detection periods, which are ineffective at mitigating temporal structure in data and discard useful data. [ABSTRACT FROM AUTHOR]

This article discusses the importance of including non-human animals in environmental justice research. It highlights that environmental justice is not only about disparities in environmental quality and health based on race and class, but also about the relationship between humans and the natural world. The symposium "Justice First: Interdisciplinary Approaches in Environmental Justice Research" brought together speakers who examined environmental justice in relation to urban health, environmental injustices, and education. The symposium emphasized the need for a paradigm shift in ecological research, centering social justice and including youth in research. It also explored topics such as the impact of historical redlining on urban ecosystem health, rodent infestations in Philadelphia neighborhoods, and the influence of urban stressors on wildlife physiology. The symposium called for interdisciplinary scholarship and recognized the importance of lived experiences in shaping research. [Extracted from the article]

Wildlife telemetry data may be used to answer a diverse range of questions relevant to wildlife ecology and management. One challenge to modeling telemetry data is that animal movement often varies greatly in pattern over time, and current continuous‐time modeling approaches to handle such nonstationarity require bespoke and often complex models that may pose barriers to practitioner implementation. We demonstrate a novel application of treed Gaussian process (TGP) modeling, a Bayesian machine learning approach that automatically captures the nonstationarity and abrupt transitions present in animal movement. The machine learning formulation of TGPs enables modeling to be nearly automated, while their Bayesian formulation allows for the derivation of movement descriptors with associated uncertainty measures. We demonstrate the use of an existing R package to implement TGPs using the familiar Markov chain Monte Carlo algorithm. We then use estimated movement trajectories to derive movement descriptors that can be compared across individuals and populations. We applied the TGP model to a case study of lesser prairie‐chickens (Tympanuchus pallidicinctus) to demonstrate the benefits of TGP modeling and compared distance traveled and residence times across lesser prairie‐chicken individuals and populations. For broad usability, we outline all steps necessary for practitioners to specify relevant movement descriptors (e.g., turn angles, speed, contact points) and apply TGP modeling and trajectory comparison to their own telemetry datasets. Combining the predictive power of machine learning and the statistical inference of Bayesian methods to model movement trajectories allows for the estimation of statistically comparable movement descriptors from telemetry studies. Our use of an accessible R package allows practitioners to model trajectories and estimate movement descriptors, facilitating the use of telemetry data to answer applied management questions. [ABSTRACT FROM AUTHOR]

Distance traveled and home range size describe how animals move in space. The seasonal variations of these parameters are important to comprehensively understand animal ecology and its connection with reproductive behavior and energy costs. Researchers usually estimate the distance traveled as the sum of the straight-line displacements between sampled positions, but this approach is sensitive to the sampling frequency and does not account for the tortuosity of the animal's movements. By means of the continuous-time movement modeling which takes into account autocorrelation and tortuosity of movement data, we estimated the distance traveled and monthly home range size of 28 wild boar Sus scrofa and modeled their inter-sexual seasonal variability. Males traveled longer distances and used larger home ranges than females, particularly during the rut in autumn-winter, consistently with the different biological cycles of males and females. Males enlarged their home ranges during the rut but traveled constant average distances along the year, whereas females traveled shorter distances in correspondence with the peak of food resources and birth periods but exhibited constant home range size across seasons. The differences between the seasonal variation patterns of distance traveled and home range size, observed in both sexes, revealed the complex relationship between these two aspects of spatial behavior and the great opportunity of including both distance traveled and home range size in behavioral ecology investigations. We provided a detailed analysis of wild boar spatial behavior and its relationships with the reproductive cycles of males and females, promoting a deeper comprehension of their behavioral ecology. [ABSTRACT FROM AUTHOR]

Research Highlight: Piccoli, G. C. d. O., Antiqueira, P. A. P., Srivastava, D. S., & Romero, G. Q. (2024). Trophic cascades within and across ecosystems: The role of anti‐predatory defences, predator type and detritus quality. Journal of Animal Ecology, 00, 1–14. https://doi.org/10.1111/1365‐2656.14063. Ecosystem functioning is controlled by the interplay between bottom‐up supply of limiting nutrients and top‐down animal feedback effects. However, the degree of animal versus nutrient control is context‐dependent. A key challenge lies in characterizing this context dependency which is hypothesized to depend on differences in animal functional traits. Reporting on an important experiment, Piccoli et al. (2014) evaluate how interactions among functionally different predators and decomposer prey create context dependency in top‐down control of a model system–tropical bromeliad tank ecosystems. Bromeliad plants hold water in their tanks supporting microcosm ecosystems containing terrestrial and aquatic insect larvae and arachnids. The ecosystems are supported by nutrients in plant litter that rains down from forest canopies into the tanks. Nutrients are released after litter is decomposed by a functionally diverse community of larval insect decomposers that differ in feeding mode and antipredator defence strategy. This decomposer community is preyed upon by an exclusively narrowly ranging aquatic insect larval predator and widely ranging spider predator that crosses between the aquatic and surrounding terrestrial ecosystems. Experimental manipulation of the animal community to test for the degree of control by predators mediated by the functionally diverse prey community included four treatments: (i) a control with the detritivores composing different function groups but without predators, (ii) the cross‐ecosystem spider predator added, (iii) the purely aquatic damselfly larvae predator added and (iv) both predator types added to capture their interacting effect on ecosystem function (decomposition, nutrient release, and plant growth). Notably, the study resolved the causal pathways and strengths of direct and indirect control using structural equation modelling. These findings reveal how context dependency arises due to different capacities of the predators alone and together to overcome prey defences and control their abundances, with attendant cascading effects that diminished as well as enhanced decomposition and nutrient release to support bromeliad plant production. The study reveals that predators have a decided, albeit qualitatively and quantitatively different, hand in shaping the degree of bottom‐up control through feedback effect on the release of limiting nutrients. This ground‐breaking study provides a way forward in understanding the mechanisms determining context dependency in the control over ecosystem functioning. [ABSTRACT FROM AUTHOR]

Research Highlight: Mistrick, J., Veitch, J. S. M., Kitchen, S. M., Clague, S., Newman, B. C., Hall, R. J., Budischak, S. A., Forbes, K. M., & Craft, M. E. (2024). Effects of food supplementation and helminth removal on space use and spatial overlap in wild rodent populations. Journal of Animal Ecology. http://doi.org/10.1111/1365‐2656.14067. The spread of pathogens has been of long‐standing interest, even before dramatic outbreaks of avian influenza and the coronavirus pandemic spiked broad public interest. However, the dynamics of pathogen spread in wild populations are complex, with multiple effects shaping where animals go (their space use), population density and, more fundamentally, the resultant patterns of contacts (direct or indirect) among individuals. Thus, experimental studies exploring the dynamics of contact under different sets of conditions are needed. In the current field study, Mistrick et al. (2024) used a multifactorial experimental design, manipulating food availability and individual pathogen infection state in wild bank voles (Clethrionomys glareolus). They found that while food availability, individual traits and seasonality can affect how far individual voles moved, the degree of overlap between individual voles remained largely the same despite a high variation in population density—which itself was affected by food availability. These results highlight how biotic and abiotic factors can shape patterns of space use and balance the level of spatial overlap through multiple pathways. [ABSTRACT FROM AUTHOR]

Research Highlight: Rademaker, M., van Leeuwen, A., & Smallegange, I. M. (2024). Why we cannot always expect life history strategies to directly inform on sensitivity to environmental change. Journal of Animal Ecology, https://doi.org/10.1111/1365‐2656.14050. Ecological studies have long delved into how organisms allocate energy between reproduction and somatic maintenance to maximize fitness. This allocation gives rise to various life‐history strategies, and these strategies have been shown to predict how populations respond to environmental change, allowing us to generalize potential responses to increasing human pressures. Such predictions have, however, been made for a limited set of terrestrial taxa and typically do not explore how individual differences in life‐history responses to environmental change scale to affect population‐level responses. Using novel data on diverse fish species, Rademaker et al. (2024) construct models that link individual‐level trade‐offs in energy allocation under environmental change to population‐level life‐history strategies. A key finding in their study is that short‐lived species are not more sensitive to environmental change—unlike results of previous studies. This study represents a new generation of work that underscores the complexity of predicting population responses to environmental shifts and suggests a need for a broader understanding of individual‐level mechanisms. The results of Rademaker et al. (2024) encourage further mechanistic life‐history analyses across a wider range of species and populations to validate the exciting findings and explore their implications across diverse ecological contexts. [ABSTRACT FROM AUTHOR]

Brief introduction: What are microclimates and why are they important? Microclimate science has developed into a global discipline. Microclimate science is increasingly used to understand and mitigate climate and biodiversity shifts. Here, we provide an overview of the current status of microclimate ecology and biogeography in terrestrial ecosystems, and where this field is heading next. Microclimate investigations in ecology and biogeography: We highlight the latest research on interactions between microclimates and organisms, including how microclimates influence individuals, and through them populations, communities and entire ecosystems and their processes. We also briefly discuss recent research on how organisms shape microclimates from the tropics to the poles. Microclimate applications in ecosystem management: Microclimates are also important in ecosystem management under climate change. We showcase new research in microclimate management with examples from biodiversity conservation, forestry and urban ecology. We discuss the importance of microrefugia in conservation and how to promote microclimate heterogeneity. Methods for microclimate science: We showcase the recent advances in data acquisition, such as novel field sensors and remote sensing methods. We discuss microclimate modelling, mapping and data processing, including accessibility of modelling tools, advantages of mechanistic and statistical modelling and solutions for computational challenges that have pushed the state‐of‐the‐art of the field. What's next?: We identify major knowledge gaps that need to be filled for further advancing microclimate investigations, applications and methods. These gaps include spatiotemporal scaling of microclimate data, mismatches between macroclimate and microclimate in predicting responses of organisms to climate change, and the need for more evidence on the outcomes of microclimate management. [ABSTRACT FROM AUTHOR]

Acoustic communication, such as bird song, is vital in animal ecology, facilitating reproduction, feeding, defense, and more. Variation in bird song may result from adaptation to environmental features such as anthropogenic noise. The vocal repertoire of raptors is essentially unstudied, particularly in urban environments. The aim of this work was to describe and quantify the acoustic repertoire of Chimango Caracaras (Milvago chimango) in rural and urban areas in La Pampa Province, Argentina. I recorded 26 1-min sound samples at each of four breeding colonies (one rural and three urban) during the austral reproductive season of 2021–2022. I recorded 241 vocalizations corresponding to nine clearly distinct call types. Two types of calls made up 50.6% and 19.5% of the vocalizations and seven others made up <10.0% each. Three call types had trills (fast repetitive notes). Average percentage of call types differed significantly between the two habitats (P < 0.01), with more trills produced in rural habitats. Average calling rate was 6.6 ± 5.1 calls/min at rural colonies and 10.7 ± 10.7 at urban colonies. The number of different call types produced was 2.1 ± 1.6 types/min at rural colonies and 2.7 ± 1.8 at urban colonies. The greater calling rate of Chimango Caracaras in urban areas may represent an attempt to improve signal effectiveness among the anthropogenic acoustic clutter. La comunicación acústica, como el canto de las aves, es vital en la ecología animal, al facilitar la reproducción, alimentación, defensa y otras actividades. La variación en el canto de las aves puede deberse a la adaptación a características ambientales como el ruido antropogénico. El repertorio vocal de las rapaces ha sido poco estudiado, especialmente en entornos urbanos. El objetivo de este trabajo fue describir y cuantificar el repertorio acústico de Milvago chimango en áreas rurales y urbanas en la provincia de La Pampa, Argentina. Registré 26 muestras de sonido de 1 minuto de duración cada una provenientes de cuatro colonias reproductivas (una rural y tres urbanas) durante la temporada reproductora austral de 2021–2022. Registré 241 vocalizaciones correspondientes a nueve tipos de llamadas claramente distintas. Dos tipos de llamadas representaron el 50.6% y el 19.5% de las vocalizaciones y otras siete representaron <10.0% cada una. Tres tipos de llamadas tuvieron trinos (notas rápidas y repetitivas). Los porcentajes de tipos de llamadas difirieron significativamente entre los dos hábitats (P<0.01), con más trinos producidos en hábitats rurales. La tasa de llamadas fue de 6.6 ± 5.1 llamadas/minuto en colonias rurales y 10.7 ± 10.7 en colonias urbanas. El número de tipos de llamadas diferentes producidas fue de 2.1 ± 1.6 tipos/minuto en colonias rurales y 2.7 ± 1.8 en colonias urbanas. La mayor tasa de llamadas de M. chimango en áreas urbanas puede representar un intento de mejorar la efectividad de la señal ante la distorsión acústica antropogénica. [Traducción del equipo editorial] [ABSTRACT FROM AUTHOR]