1. Distribution and Clonality of drug-resistant tuberculosis in South Africa
- Author
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Halima Said, John Ratabane, Linda Erasmus, Yasmin Gardee, Shaheed Omar, Andries Dreyer, Farzana Ismail, Zaheda Bhyat, Tiisetso Lebaka, Minty van der Meulen, Thabisile Gwala, Adeboye Adelekan, Karidia Diallo, and Nazir Ismail
- Subjects
RR-TB ,Genotyping ,Spoligotyping ,24-loci MIRU-VNTR typing ,Microbiology ,QR1-502 - Abstract
Abstract Background Studies have shown that drug-resistant tuberculosis (DR-TB) in South Africa (SA) is clonal and is caused mostly by transmission. Identifying transmission chains is important in controlling DR-TB. This study reports on the sentinel molecular surveillance data of Rifampicin-Resistant (RR) TB in SA, aiming to describe the RR-TB strain population and the estimated transmission of RR-TB cases. Method RR-TB isolates collected between 2014 and 2018 from eight provinces were genotyped using combination of spoligotyping and 24-loci mycobacterial interspersed repetitive-units-variable-number tandem repeats (MIRU-VNTR) typing. Results Of the 3007 isolates genotyped, 301 clusters were identified. Cluster size ranged between 2 and 270 cases. Most of the clusters (247/301; 82.0%) were small in size (
- Published
- 2021
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