139 results on '"Andrew C. Chan"'
Search Results
2. Supplementary Figure 2 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 206K, Regulatory activity is mostly retained in human tBregs expressing low levels of CD20
- Published
- 2023
- Full Text
- View/download PDF
3. Supplementary Figure 3 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 126K, Activity of tBregs is efficiently blocked by CpG-ODN
- Published
- 2023
- Full Text
- View/download PDF
4. Supplementary Figure 4 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 119K, Targeted tBreg inactivation with BLC-arp/CpG-ODN
- Published
- 2023
- Full Text
- View/download PDF
5. Supplementary Figure 6 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 172K, tBregs express low levels of 4-1BBL
- Published
- 2023
- Full Text
- View/download PDF
6. Supplementary Figure 5 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 96K, In vivo inactivation of tBregs with BLC-arp/CpG-ODN induces antitumor T cell responses
- Published
- 2023
- Full Text
- View/download PDF
7. Supplementary Figure Legend from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 79K
- Published
- 2023
- Full Text
- View/download PDF
8. Supplementary Figure 1 from Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Charles Hesdorffer, Andrew C. Chan, Ronald E. Gress, Robert P. Wersto, Maria Merino, Jinping Lai, Katarzyna Wejksza, Catalina Lee Chang, and Monica Bodogai
- Abstract
PDF file - 1209K, tBregs express low levels of CD20
- Published
- 2023
- Full Text
- View/download PDF
9. Decision letter: PTPN22 R620W gene editing in T cells enhances low-avidity TCR responses
- Author
-
Andrew Cope and Andrew C Chan
- Published
- 2022
- Full Text
- View/download PDF
10. Ocrelizumab: A New Generation of anti‐<scp>CD20 mAb</scp>for Treatment of Multiple Sclerosis
- Author
-
Andrew C. Chan, Peter Chin, and Paul Brunetta
- Subjects
Clinical trial ,business.industry ,medicine.drug_class ,Multiple sclerosis ,Immunology ,medicine ,Rituximab ,Ocrelizumab ,Anti cd20 ,medicine.disease ,business ,Monoclonal antibody ,medicine.drug - Published
- 2019
- Full Text
- View/download PDF
11. B cell-mediated regulatory mechanisms control tumor-promoting intestinal inflammation
- Author
-
Christian Melcher, Jinbo Yu, Vu Huy Hoang Duong, Katrin Westphal, Noushin Helmi Siasi Farimany, Anton Shaverskyi, Bei Zhao, Till Strowig, Silke Glage, Korbinian Brand, Andrew C. Chan, Niko Föger, and Kyeong-Hee Lee
- Subjects
Inflammation ,B-Lymphocytes, Regulatory ,Carcinogenesis ,Colitis ,T-Lymphocytes, Regulatory ,General Biochemistry, Genetics and Molecular Biology ,Immunoglobulin A ,Interleukin-10 ,Mice, Inbred C57BL ,Disease Models, Animal ,Mice ,Neoplasms ,Animals ,Th17 Cells - Abstract
Mechanisms underlying tumor-promoting inflammatory processes in colitis-associated colorectal cancer (CAC) remain largely elusive. Here, we provide genetic evidence for distinct B cell-mediated immunoregulatory mechanisms that protect from chronic colitis versus CAC. We demonstrate an inherent capacity of interleukin-10 (IL-10)-producing B cells to differentiate into immunoglobulin A (IgA) plasma cells (PCs) upon Toll-like receptor (TLR) activation. Our data show that B cell-derived IL-10 is essential to limit pathogenic T helper type 1 (Th1)/Th17 T cell responses during chronic colitis, while IgA PCs derived from IL-10
- Published
- 2022
- Full Text
- View/download PDF
12. Comprehensive sampling of the lung microbiome in early-stage non–small cell lung cancerCentral MessagePerspective
- Author
-
Rishindra M. Reddy, MD, MBA, Kiran Lagisetty, MD, Jules Lin, MD, Andrew C. Chang, MD, Abhinav Achreja, PhD, Nithya Ramnath, MD, Deepak Nagrath, PhD, Robert Dickson, MD, and Frank Weinberg, MD, PhD
- Subjects
lung cancer ,lung microbiome ,microbiome diversity ,poorly differentiated ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 ,Surgery ,RD1-811 - Abstract
Objectives: Data are scarce on whether the composition of the lung microbiome (extending from the nasopharynx to the peripheral lung tissue) varies according to histology or grade of non–small cell lung cancer. We hypothesized that the composition of the lung microbiome would vary according to the histology and the grade of non–small cell lung cancer. Methods: We collected naso-oral and central lobar (cancer affected, ipsilateral unaffected, and contralateral unaffected) bronchoalveolar lavage fluid and brushing samples from patients with clinical early-stage lung cancer between July 2018 and February 2020 at a single academic center. We performed bacterial 16S rRNA sequencing and then compared clinical and pathologic findings with microbiome signatures. Results: Samples were collected from 28 patients. Microbial composition in affected lobes displayed unique enrichment of oropharyngeal bacterial species that was significantly different compared with that from the unaffected contralateral lobes; patients with chronic obstructive pulmonary disease had similar diversity to those without chronic obstructive pulmonary disease (P = .1312). The lung microbiome diversity in patients with adenocarcinoma was similar to those with squamous cell cancer (P = .27). There were no differences in diversity or composition in the unaffected lobes of patients with adenocarcinoma versus squamous cell cancer. There was a trend toward lower lung microbial diversity in poorly differentiated adenocarcinomas compared with well-differentiated adenocarcinomas (P = .08). Conclusions: The lung microbiota differs between cancer affected and unaffected lobes in the same patient. Furthermore, poorly differentiated lung cancers were associated with lower microbial diversity. Larger studies will be required to confirm these findings.
- Published
- 2024
- Full Text
- View/download PDF
13. Autoimmunity linked protein phosphatase PTPN22 as a target for cancer immunotherapy
- Author
-
Jeanne Cheung, Andrew C. Chan, Qian Gong, Marina Moskalenko, Qinglin Ou, Zia Khan, Christine Pai, Ryan Rodriguez, Huizhong Xiong, and Rafael Cubas
- Subjects
0301 basic medicine ,Male ,Cancer Research ,medicine.medical_treatment ,Immunology ,medicine.disease_cause ,Autoimmunity ,Immune tolerance ,PTPN22 ,03 medical and health sciences ,Mice ,0302 clinical medicine ,Immune system ,Cancer immunotherapy ,Atezolizumab ,Neoplasms ,medicine ,Immunology and Allergy ,Animals ,Humans ,T-lymphocytes ,RC254-282 ,Pharmacology ,business.industry ,autoimmunity ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Basic Tumor Immunology ,Immunotherapy ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer research ,Molecular Medicine ,immunotherapy ,Signal transduction ,business - Abstract
BackgroundCancer immunotherapy has evolved from interferon-alpha (IFNα) and interleukin-2 in the 1980s to CTLA-4 and PD-1/PD-L1 checkpoint inhibitors (CPIs), the latter highlighting the importance of enhancing T-cell functions. While the search for novel immunomodulatory pathways continues, combination therapies augmenting multiple pathways can also increase efficacy. The association of autoimmune-related adverse events with clinical efficacy following CPI treatment has been inferred and suggests that breaking tolerance thresholds associated with autoimmunity may affect host immune responses for effective cancer immunotherapy.ResultsHere, we show that loss of autoimmune associated PTPN22, a key desensitization node for multiple signaling pathways, including IFNα receptor (IFNAR) and T-cell receptor, can augment tumor responses. Implantation of syngeneic tumors in Ptpn22-/- mice led to expansion and activation of peripheral and intratumoral T cells and, in turn, spontaneous tumor regression as well as enhanced responses in combination with anti-PD-L1 treatment. Using genetically modified mice expressing a catalytically inactive PTPN22 or the autoimmunity-associated human single-nucleotide polymorphism variant, augmentation of antitumor immunity was dependent on PTPN22 phosphatase activity and partially on its adaptor functions. Further, antitumor responses were dependent on both CD4+ and CD8+T cells and, in part, IFNAR function. Finally, we demonstrate that the autoimmune susceptibility Ptpn22(C1858T) variant is associated with lower risk of developing non-melanoma skin cancers, improved overall survival and increased risk for development of hyperthyroidism or hypothyroidism following atezolizumab (anti-PD-L1) treatment.ConclusionsTogether, these data suggest that inhibition of PTPN22 phosphatase activity may provide an effective therapeutic option for cancer immunotherapy and that exploring genetic variants that shift immune tolerance thresholds may serve as a paradigm for finding new cancer immunotherapy targets.
- Published
- 2020
14. 30 Years of Biotherapeutics Development-What Have We Learned?
- Author
-
Rajita Pappu, Andrew C. Chan, Nico Ghilardi, and Joseph R. Arron
- Subjects
0301 basic medicine ,Biological Products ,Clinical Trials as Topic ,Immunology ,Drug Evaluation, Preclinical ,Biology ,History, 20th Century ,Data science ,History, 21st Century ,Food and drug administration ,Clinical trial ,Biological Therapy ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,Human disease ,Human use ,Drug Development ,030220 oncology & carcinogenesis ,Drug Discovery ,Immunology and Allergy ,Animals ,Humans ,Tumor necrosis factor α ,Biotechnology - Abstract
Since the birth of biotechnology, hundreds of biotherapeutics have been developed and approved by the US Food and Drug Administration (FDA) for human use. These novel medicines not only bring significant benefit to patients but also represent precision tools to interrogate human disease biology. Accordingly, much has been learned from the successes and failures of hundreds of high-quality clinical trials. In this review, we discuss general and broadly applicable themes that have emerged from this collective experience. We base our discussion on insights gained from exploring some of the most important target classes, including interleukin-1 (IL-1), tumor necrosis factor α (TNF-α), IL-6, IL-12/23, IL-17, IL-4/13, IL-5, immunoglobulin E (IgE), integrins and B cells. We also describe current challenges and speculate about how emerging technological capabilities may enable the discovery and development of the next generation of biotherapeutics.
- Published
- 2020
15. PTPN22 regulates NLRP3-mediated IL1B secretion in an autophagy-dependent manner
- Author
-
David J. Rawlings, Claudia Gottier, Andrew C. Chan, Gerhard Rogler, Silvia Lang, Michael Scharl, Marianne R. Spalinger, Xuezhi Dai, University of Zurich, and Scharl, Michael
- Subjects
0301 basic medicine ,Inflammasomes ,Interleukin-1beta ,Autophagy-Related Proteins ,PEST-enriched phosphatase ,Protein tyrosine phosphatase ,Pyrin domain ,1307 Cell Biology ,chemistry.chemical_compound ,Mice ,0302 clinical medicine ,immune system diseases ,Sequestosome-1 Protein ,SQSTM1 ,NOD-like receptor protein ,Phosphorylation ,skin and connective tissue diseases ,integumentary system ,Inflammasome ,Basic Research Paper ,10219 Clinic for Gastroenterology and Hepatology ,030220 oncology & carcinogenesis ,Gene Knockdown Techniques ,medicine.drug ,Protein Binding ,610 Medicine & health ,Biology ,PTPN22 ,03 medical and health sciences ,NLRP3 ,inflammasome ,NLR Family, Pyrin Domain-Containing 3 Protein ,medicine ,1312 Molecular Biology ,Autophagy ,Animals ,Humans ,Molecular Biology ,Lyp ,tyrosine phosphorylation ,Autophagosomes ,Tyrosine phosphorylation ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Cell Biology ,CARD Signaling Adaptor Proteins ,030104 developmental biology ,HEK293 Cells ,chemistry ,Cancer research ,Carrier Proteins - Abstract
A variant within the gene locus encoding PTPN22 (protein tyrosine phosphatase, non-receptor type 22) emerged as an important risk factor for auto-inflammatory disorders, including rheumatoid arthritis, systemic lupus erythematosus and type 1 diabetes, but at the same time protects from Crohn disease, one of the 2 main forms of inflammatory bowel diseases. We have previously shown that loss of PTPN22 results in decreased NLRP3 (NLR family pyrin domain containing 3) activation and that this effect is mediated via enhanced NLRP3 phosphorylation. However, it is unclear how phosphorylation of NLRP3 mediates its inhibition. Here, we demonstrate that loss of macroautophagy/autophagy abrogates the inhibitory effect on NLRP3 activation observed upon loss of PTPN22. Phosphorylated, but not nonphosphorylated NLRP3 is found in autophagosomes, indicating that NLRP3 phosphorylation mediates its inactivation via promoting sequestration into phagophores, the precursors to autophagosomes. This finding shows that autophagy and NLRP3 inflammasome activation are connected, and that PTPN22 plays a key role in the regulation of those 2 pathways. Given its role in inflammatory disorders, PTPN22 might be an attractive therapeutic target, and understanding the cellular mechanisms modulated by PTPN22 is of crucial importance.
- Published
- 2017
16. Protein tyrosine phosphatase non-receptor type 22 modulates colitis in a microbiota-dependent manner
- Author
-
Silvia Lang, David J. Rawlings, Gerhard Rogler, Xuezhi Dai, Annelies Geirnaert, Christophe Lacroix, Claudia Gottier, Thomas Schmidt, Marlene Schwarzfischer, Christian von Mering, Andrew C. Chan, Kirstin Atrott, Michael Scharl, Marianne R. Spalinger, Larissa Hering, University of Zurich, and Scharl, Michael
- Subjects
0301 basic medicine ,Mutation, Missense ,Inflammation ,610 Medicine & health ,Protein tyrosine phosphatase ,2700 General Medicine ,Gut flora ,Inflammatory bowel disease ,digestive system ,PTPN22 ,Pathogenesis ,03 medical and health sciences ,Mice ,0302 clinical medicine ,medicine ,Animals ,Colitis ,Mice, Knockout ,biology ,Dextran Sulfate ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,General Medicine ,medicine.disease ,biology.organism_classification ,digestive system diseases ,10124 Institute of Molecular Life Sciences ,3. Good health ,Gastrointestinal Microbiome ,stomatognathic diseases ,030104 developmental biology ,10219 Clinic for Gastroenterology and Hepatology ,Amino Acid Substitution ,030220 oncology & carcinogenesis ,Immunology ,Dysbiosis ,medicine.symptom ,Research Article - Abstract
The gut microbiota is crucial for our health, and well-balanced interactions between the host's immune system and the microbiota are essential to prevent chronic intestinal inflammation, as observed in inflammatory bowel diseases (IBD). A variant in protein tyrosine phosphatase non-receptor type 22 (PTPN22) is associated with reduced risk of developing IBD, but promotes the onset of autoimmune disorders. While the role of PTPN22 in modulating molecular pathways involved in IBD pathogenesis is well studied, its impact on shaping the intestinal microbiota has not been addressed in depth. Here, we demonstrate that mice carrying the PTPN22 variant (619W mice) were protected from acute dextran sulfate sodium (DSS) colitis, but suffered from pronounced inflammation upon chronic DSS treatment. The basal microbiota composition was distinct between genotypes, and DSS-induced dysbiosis was milder in 619W mice than in WT littermates. Transfer of microbiota from 619W mice after the first DSS cycle into treatment-naive 619W mice promoted colitis, indicating that changes in microbial composition enhanced chronic colitis in those animals. This indicates that presence of the PTPN22 variant affects intestinal inflammation by modulating the host's response to the intestinal microbiota.
- Published
- 2019
- Full Text
- View/download PDF
17. NLRP3 tyrosine phosphorylation is controlled by protein tyrosine phosphatase PTPN22
- Author
-
Marianne R. Spalinger, Stephanie Kasper, Claudia Gottier, Silvia Lang, Kirstin Atrott, Stephan R. Vavricka, Sylvie Scharl, Tina Raselli, Isabelle Frey-Wagner, Petrus M. Gutte, Markus G. Grütter, Hans-Dietmar Beer, Emmanuel Contassot, Andrew C. Chan, Xuezhi Dai, David J. Rawlings, Florian Mair, Burkhard Becher, Werner Falk, Michael Fried, Gerhard Rogler, Michael Scharl, University of Zurich, and Scharl, Michael
- Subjects
0301 basic medicine ,Interleukin-1beta ,610 Medicine & health ,2700 General Medicine ,Protein tyrosine phosphatase ,Receptor tyrosine kinase ,PTPN22 ,Mice ,03 medical and health sciences ,chemistry.chemical_compound ,0302 clinical medicine ,Cell Line, Tumor ,NLR Family, Pyrin Domain-Containing 3 Protein ,10019 Department of Biochemistry ,medicine ,Animals ,Humans ,Secretion ,Phosphorylation ,030304 developmental biology ,0303 health sciences ,integumentary system ,biology ,10177 Dermatology Clinic ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Inflammasome ,Tyrosine phosphorylation ,General Medicine ,Colitis ,Inflammatory Bowel Diseases ,3. Good health ,Disease Models, Animal ,10219 Clinic for Gastroenterology and Hepatology ,030104 developmental biology ,chemistry ,10076 Center for Integrative Human Physiology ,030220 oncology & carcinogenesis ,biology.protein ,Cancer research ,570 Life sciences ,Corrigendum ,Intracellular ,Research Article ,medicine.drug - Abstract
Inflammasomes form as the result of the intracellular presence of danger-associated molecular patterns and mediate the release of active IL-1β, which influences a variety of inflammatory responses. Excessive inflammasome activation results in severe inflammatory conditions, but physiological IL-1β secretion is necessary for intestinal homeostasis. Here, we have described a mechanism of NLRP3 inflammasome regulation by tyrosine phosphorylation of NLRP3 at Tyr861. We demonstrated that protein tyrosine phosphatase non-receptor 22 (PTPN22), variants in which are associated with chronic inflammatory disorders, dephosphorylates NLRP3 upon inflammasome induction, allowing efficient NLRP3 activation and subsequent IL-1β release. In murine models, PTPN22 deficiency resulted in pronounced colitis, increased NLRP3 phosphorylation, but reduced levels of mature IL-1β. Conversely, patients with inflammatory bowel disease (IBD) that carried an autoimmunity-associated PTPN22 variant had increased IL-1β levels. Together, our results identify tyrosine phosphorylation as an important regulatory mechanism for NLRP3 that prevents aberrant inflammasome activation.
- Published
- 2016
- Full Text
- View/download PDF
18. Ocrelizumab: A New Therapeutic Paradigm for Multiple Sclerosis
- Author
-
Peter Chin and Andrew C. Chan
- Subjects
business.industry ,Multiple sclerosis ,Physiology ,medicine.disease ,Biochemistry ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Ocrelizumab ,030212 general & internal medicine ,business ,Neuroscience ,030217 neurology & neurosurgery ,medicine.drug - Published
- 2017
- Full Text
- View/download PDF
19. Stratified medicine in inflammatory disorders: From theory to practice
- Author
-
Andrew C. Chan, Mary E. Keir, Brian L. Yaspan, Michael J. Townsend, and Joseph R. Arron
- Subjects
medicine.medical_specialty ,Immunology ,Anti-Inflammatory Agents ,Psychological intervention ,Disease ,Arthritis, Rheumatoid ,Intervention (counseling) ,medicine ,Humans ,Immunology and Allergy ,Molecular Targeted Therapy ,Intensive care medicine ,Asthma ,business.industry ,Adalimumab ,Antibodies, Monoclonal ,medicine.disease ,Ulcerative colitis ,Treatment Outcome ,Drug development ,Rheumatoid arthritis ,Biomarker (medicine) ,Colitis, Ulcerative ,business ,Biomarkers - Abstract
Chronic inflammatory disorders are complex and characterized by significant heterogeneity in molecular, pathological, and clinical features. This heterogeneity poses challenges for the development of targeted molecular interventions for these disorders, as not all patients with a given clinical diagnosis have disease driven by a single dominant molecular pathway, hence not all patients will benefit equally from a given intervention. Biomarkers related to molecular manifestations of disease are increasingly being applied to enable stratified approaches to drug development. Biomarkers may be used to identify which patients are most likely to benefit from an intervention (predictive), identify patients at increased risk of disease progression (prognostic), and monitor biological responsiveness to an intervention (pharmacodynamic). Here we consider how biomarker-guided stratification of patients may increase benefit from targeted therapies for asthma, rheumatoid arthritis and inflammatory bowel diseases.
- Published
- 2015
- Full Text
- View/download PDF
20. Factors affecting timing of surgery following neoadjuvant chemoradiation for esophageal cancer
- Author
-
Shannon J. Jiang, Andrada C. Diaconescu, Dyke P. McEwen, Laura N. McEwen, Andrew C. Chang, Jules Lin, Rishindra M. Reddy, William R. Lynch, Sidra Bonner, and Kiran H. Lagisetty
- Subjects
Esophagectomy ,Timing ,Interval ,Chemoradiation ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Background: Neoadjuvant chemoradiation with esophagectomy is standard management for locally advanced esophageal cancer. Studies have shown that surgical timing following chemoradiation is important for minimizing postoperative complications, however in practice timing is often variable and delayed. Although postoperative impact of surgical timing has been studied, less is known about factors associated with delays. Materials and methods: A retrospective review was performed for 96 patients with esophageal cancer who underwent chemoradiation then esophagectomy between 2018 and 2020 at a single institution. Univariable and stepwise multivariable analyses were used to assess association between social (demographics, insurance) and clinical variables (pre-operative weight, comorbidities, prior cardiothoracic surgery, smoking history, disease staging) with time to surgery (≤8 weeks “on-time” vs. >8 weeks “delayed”). Results: Fifty-one patients underwent esophagectomy within 8 weeks of chemoradiation; 45 had a delayed operation. Univariate analysis showed the following characteristics were significantly different between on-time and delayed groups: weight loss within 3 months of surgery (3.9 ± 5.1 kg vs. 1.5 ± 3.6 kg; P = 0.009), prior cardiovascular disease (29% vs. 49%; P = 0.05), prior cardiothoracic surgery (4% vs. 22%; P = 0.01), history of ever smoked (69% vs. 87%; P = 0.04), absent nodal metastasis on pathology (57% vs. 82%; P = 0.008). Multivariate analysis demonstrated that prior cardiothoracic surgery (OR 8.924, 95%CI 1.67–47.60; P = 0.01) and absent nodal metastasis (OR 4.186, 95%CI 1.50–11.72; P = 0.006) were associated with delayed surgery. Conclusions: Delayed esophagectomy following chemoradiotherapy is associated with prior cardiothoracic surgery and absent nodal metastasis. Further investigations should focus on understanding how these factors contribute to delays to guide treatment planning and mitigate sources of outcome disparities.
- Published
- 2023
- Full Text
- View/download PDF
21. Autoimmunity-associated protein tyrosine phosphatase PEP negatively regulates IFN-α receptor signaling
- Author
-
Eric Suto, Derek A. Holmes, Patrick Caplazi, Andrew C. Chan, Wyne P. Lee, Qian Gong, Hamish R.C. Smith, and Qinglin Ou
- Subjects
Immunology ,education ,Blotting, Western ,Alpha interferon ,Enzyme-Linked Immunosorbent Assay ,Protein tyrosine phosphatase ,Receptor, Interferon alpha-beta ,Biology ,medicine.disease_cause ,Article ,Autoimmunity ,PTPN22 ,Mice ,Immune system ,Interferon ,immune system diseases ,medicine ,Immunology and Allergy ,Animals ,Immunoprecipitation ,Lupus Erythematosus, Systemic ,Receptor ,skin and connective tissue diseases ,Mice, Knockout ,Interferon-alpha ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Flow Cytometry ,Hematopoietic Stem Cells ,Molecular biology ,Cancer research ,cardiovascular system ,Signal transduction ,medicine.drug ,circulatory and respiratory physiology ,Signal Transduction - Abstract
Holmes et al. demonstrate that the protein tyrosine phosphatase PEP (PTPN22 in humans) associated with lupus and other autoimmune diseases, inhibits IFN-α receptor signaling in mice. PEP-deficient hematopoietic progenitors demonstrate increased IFNAR signaling, IFN-inducible gene expression and proliferation. PEP-deficient mice treated with IFN-α exhibit lupus-like disease and profound defects in hematopoiesis, resulting in cytopenia., The protein tyrosine phosphatase PTPN22(C1858T) allelic polymorphism is associated with increased susceptibility for development of systemic lupus erythematosus (SLE) and other autoimmune diseases. PTPN22 (also known as LYP) and its mouse orthologue PEP play important roles in antigen and Toll-like receptor signaling in immune cell functions. We demonstrate here that PEP also plays an important inhibitory role in interferon-α receptor (IFNAR) signaling in mice. PEP co-immunoprecipitates with components of the IFNAR signaling complex. Pep−/− hematopoietic progenitors demonstrate increased IFNAR signaling, increased IFN-inducible gene expression, and enhanced proliferation and activation compared to Pep+/+ progenitors in response to IFN-α. In addition, Pep−/− mice treated with IFN-α display a profound defect in hematopoiesis, resulting in anemia, thrombocytopenia, and neutropenia when compared to IFN-α–treated Pep+/+ mice. As SLE patients carrying the PTPN22(C1858T) risk variant have higher serum IFN-α activity, these data provide a molecular basis for how type I IFNs and PTPN22 may cooperate to contribute to lupus-associated cytopenias.
- Published
- 2015
22. In Search of Magic Bullets: The Golden Age of Immunotherapeutics
- Author
-
Yuka Kanno, John J. O'Shea, and Andrew C. Chan
- Subjects
Biochemistry, Genetics and Molecular Biology(all) ,Drug discovery ,Magic (programming) ,Antibodies, Monoclonal ,Computational biology ,Disease ,Biology ,Article ,General Biochemistry, Genetics and Molecular Biology ,Autoimmune Diseases ,Antibodies monoclonal ,Drug Discovery ,Immunology ,Animals ,Cytokines ,Humans ,Immunotherapy ,Molecular Targeted Therapy - Abstract
Once upon a time, immunology was a black box, inflammatory and autoimmune diseases were a mystery, and relatively blunt tools were used to treat these diseases. In the last 40 years, advances in molecular biology, DNA recombination technology, and genome sequencing allowed immunologists to open the box. As the complexity and diversity of the immune response are unveiled, targeted cellular and molecular therapies now offer rational approaches to treat immune-mediated diseases. Here, we discuss how the tried and true bench-to-bedside strategies resulted in some spectacular successes, along with some puzzling failures. Conversely, the advent of targeted therapies in the clinic has led to a wealth of information that changes how we think about the pathogenesis of immune-mediated diseases and how we categorize disease. In turn, these insights can inform next-generation drug discovery and refine targeted therapies for the appropriate patient subsets.
- Published
- 2014
- Full Text
- View/download PDF
23. Use of 2D images of depth and integrated reflectivity to represent the severity of demineralization in cross-polarization optical coherence tomography
- Author
-
Cynthia L. Darling, William A. Fried, Andrew C. Chan, Jacob C. Simon, Daniel Fried, and Kenneth H. Chan
- Subjects
2d images ,Materials science ,medicine.diagnostic_test ,business.industry ,Cross polarization ,General Engineering ,General Physics and Astronomy ,General Chemistry ,Lesion depth ,Reflectivity ,General Biochemistry, Genetics and Molecular Biology ,Demineralization ,Lesion ,Optical phenomena ,Optics ,Optical coherence tomography ,medicine ,General Materials Science ,medicine.symptom ,business - Abstract
Several studies have demonstrated the potential of cross-polarization optical coherence tomography (CP-OCT) to quantify the severity of early caries lesions (tooth decay) on tooth surfaces. The purpose of this study is to show that 2D images of the lesion depth and the integrated reflectivity can be used to accurately represent the severity of early lesions. Simulated early lesions of varying severity were produced on tooth samples using simulated lesion models. Methods were developed to convert the 3D CP-OCT images of the samples to 2D images of the lesion depth and lesion integrated reflectivity. Calculated lesion depths from OCT were compared with lesion depths measured from histological sections examined using polarized light microscopy. The 2D images of the lesion depth and integrated reflectivity are well suited for visualization of early demineralization.
- Published
- 2013
- Full Text
- View/download PDF
24. Anti-CD20 Antibody Promotes Cancer Escape via Enrichment of Tumor-Evoked Regulatory B Cells Expressing Low Levels of CD20 and CD137L
- Author
-
Arya Biragyn, Robert P. Wersto, Andrew C. Chan, Jinping Lai, Ronald E. Gress, Maria J. Merino, Monica Bodogai, Catalina Lee Chang, Katarzyna Wejksza, and Charles Hesdorffer
- Subjects
Cancer Research ,Lung Neoplasms ,Regulatory B cells ,Melanoma, Experimental ,Breast Neoplasms ,Mice, Transgenic ,Article ,Metastasis ,Mice ,Immune system ,Antigen ,Tumor Cells, Cultured ,medicine ,Animals ,Humans ,CD20 ,B-Lymphocytes, Regulatory ,Mice, Inbred BALB C ,biology ,Antibodies, Monoclonal ,Cancer ,Antigens, CD20 ,medicine.disease ,Leukemia, Lymphocytic, Chronic, B-Cell ,Mice, Inbred C57BL ,4-1BB Ligand ,Oligodeoxyribonucleotides ,Oncology ,Granzyme ,Immunology ,Disease Progression ,biology.protein ,Cancer research ,Female ,Antibody - Abstract
The possible therapeutic benefits of B-cell depletion in combating tumoral immune escape have been debated. In support of this concept, metastasis of highly aggressive 4T1 breast cancer cells in mice can be abrogated by inactivation of tumor-evoked regulatory B cells (tBreg). Here, we report the unexpected finding that B-cell depletion by CD20 antibody will greatly enhance cancer progression and metastasis. Both murine and human tBregs express low levels of CD20 and, as such, anti-CD20 mostly enriches for these cells. In the 4T1 model of murine breast cancer, this effect of enriching for tBregs suggests that B-cell depletion by anti-CD20 may not be beneficial at all in some cancers. In contrast, we show that in vivo–targeted stimulation of B cells with CXCL13-coupled CpG oligonucleotides (CpG-ODN) can block cancer metastasis by inhibiting CD20Low tBregs. Mechanistic investigations suggested that CpG-ODN upregulates low surface levels of 4-1BBL on tBregs to elicit granzyme B–expressing cytolytic CD8+ T cells, offering some explanative power for the effect. These findings underscore the immunotherapeutic importance of tBreg inactivation as a strategy to enhance cancer therapy by targeting both the regulatory and activating arms of the immune system in vivo. Cancer Res; 73(7); 2127–38. ©2013 AACR.
- Published
- 2013
- Full Text
- View/download PDF
25. Toso regulates the balance between apoptotic and nonapoptotic death receptor signaling by facilitating RIP1 ubiquitination
- Author
-
Sabine Mathieu, Patricia Prilla, Dieter Adam, Mohammad Azhar Kamal, Kyeong-Hee Lee, Xuan-Hung Nguyen, Christina Wagner, Tak W. Mak, Karl S. Lang, Gulnar Fattakhova, Andrew C. Chan, Niko Föger, and Philipp A. Lang
- Subjects
MAPK/ERK pathway ,Fas Ligand Protein ,Cell Survival ,Fas-Associated Death Domain Protein ,Immunology ,Medizin ,Apoptosis ,Biochemistry ,Jurkat Cells ,Mice ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Ubiquitin ,Immune Tolerance ,Animals ,Humans ,fas Receptor ,FADD ,030304 developmental biology ,0303 health sciences ,biology ,Tumor Necrosis Factor-alpha ,Kinase ,Liver Diseases ,Ubiquitination ,Antibodies, Monoclonal ,Membrane Proteins ,RNA-Binding Proteins ,Cell Biology ,Hematology ,Cell biology ,Mice, Inbred C57BL ,Nuclear Pore Complex Proteins ,Gene Knockdown Techniques ,biology.protein ,Tumor necrosis factor alpha ,Signal transduction ,Apoptosis Regulatory Proteins ,Carrier Proteins ,Signal Transduction ,030215 immunology - Abstract
The regulation of cellular survival and apoptosis is of critical importance for the immune system to maintain immune homeostasis and to establish tolerance. Here, we demonstrate that the immune specific cell surface molecule Toso exhibits antiapoptotic effects on death receptor signaling by a novel regulatory mechanism involving the adaptor kinase RIP1. The antiapoptotic function of Toso depends on RIP1 ubiquitination and involves the recruitment of the death adaptor FADD to a Toso/RIP1 protein complex. In response to CD95L and TNFα, Toso promotes the activation of MAPK and NF-κB signaling pathways. Because of this relative augmentation of survival versus apoptotic signals, Toso raises the threshold for death receptor–mediated apoptosis. Our analysis of Toso-deficient mice revealed that Toso is essential for TNFα-mediated liver damage. Furthermore, the antiapoptotic function of Toso could be blocked by a Toso-specific monoclonal antibody, opening up new therapeutic prospects for the treatment of immune disorders and hematologic malignancies.
- Published
- 2011
- Full Text
- View/download PDF
26. Discovery of a Novel Series of Inhibitors of Lymphoid Tyrosine Phosphatase with Activity in Human T Cells
- Author
-
Sheng Li, Zhong Yin Zhang, Andrew C. Chan, Matthew D. Falk, Nunzio Bottini, Rossella Messina, Stephanie M. Stanford, Divya Krishnamurthy, Xiao Yu, Yantao He, Russell Dahl, Roza Kazemi, Virgil L. Woods, Bikash Debnath, Nouri Neamati, Amy M. Barrios, and Tong Liu
- Subjects
Models, Molecular ,Cell Membrane Permeability ,Protein Conformation ,T-Lymphocytes ,Allosteric regulation ,Phosphatase ,Tetrazoles ,Protein tyrosine phosphatase ,Quinolones ,Lymphocyte Activation ,Mass Spectrometry ,Article ,Small Molecule Libraries ,Mice ,Structure-Activity Relationship ,Protein structure ,Non-competitive inhibition ,Catalytic Domain ,Drug Discovery ,medicine ,Animals ,Humans ,Structure–activity relationship ,Cells, Cultured ,Mice, Knockout ,biology ,Chemistry ,Deuterium Exchange Measurement ,Active site ,Protein Tyrosine Phosphatase, Non-Receptor Type 22 ,Stereoisomerism ,Mice, Inbred C57BL ,Kinetics ,Biochemistry ,Mechanism of action ,Mutation ,biology.protein ,Molecular Medicine ,medicine.symptom ,Hydrophobic and Hydrophilic Interactions ,Allosteric Site - Abstract
The lymphoid tyrosine phosphatase LYP, encoded by the PTPN22 gene, is a critical regulator of signaling in T cells and recently emerged as a candidate target for therapy of autoimmune diseases. Here, by library screening, we identified a series of noncompetitive inhibitors of LYP that showed activity in primary T cells. Kinetic analysis confirmed that binding of the compounds to the phosphatase is nonmutually exclusive with respect to a known bidentate competitive inhibitor. The mechanism of action of the lead inhibitor compound 4e was studied by a combination of hydrogen/deuterium-exchange mass spectrometry and molecular modeling. The results suggest that the inhibitor interacts critically with a hydrophobic patch located outside the active site of the phosphatase. Targeting of secondary allosteric sites is viewed as a promising yet unexplored approach to develop pharmacological inhibitors of protein tyrosine phosphatases. Our novel scaffold could be a starting point to attempt development of “nonactive site” anti-LYP pharmacological agents.
- Published
- 2011
- Full Text
- View/download PDF
27. Differential regulation of mast cell degranulation versus cytokine secretion by the actin regulatory proteins Coronin1a and Coronin1b
- Author
-
Kyeong-Hee Lee, Silvia Bulfone-Paus, Zane Orinska, André Jenckel, Niko Föger, and Andrew C. Chan
- Subjects
Cell Degranulation ,Immunology ,Biology ,Proinflammatory cytokine ,Mice ,medicine ,Immunology and Allergy ,Animals ,Secretion ,Mast Cells ,Phosphorylation ,Cytoskeleton ,Microfilament Proteins ,Passive Cutaneous Anaphylaxis ,Degranulation ,Brief Definitive Report ,Mast cell ,Actin cytoskeleton ,Molecular biology ,Mice, Mutant Strains ,Cell biology ,medicine.anatomical_structure ,Cytokines ,Cytokine secretion - Abstract
Coronin1a inhibits mast cell degranulation through actin cytoskeletal dynamics while augmenting cytokine secretion, an effect exacerbated by additional loss of Coronin1b., Mast cell (MC) activation via aggregation of the high affinity IgE receptor (FcεRI) causes degranulation and release of proinflammatory mediators in a process that involves the reorganization of the actin cytoskeleton. However, the regulatory pathways and the molecular links between cytoskeletal changes and MC function are incompletely understood. In this study, we provide genetic evidence for a critical role of the actin-regulatory proteins Coronin1a (Coro1a) and Coro1b on exocytic pathways in MCs: Coro1a−/− bone marrow–derived MCs exhibit increased FcεRI-mediated degranulation of secretory lysosomes but significantly reduced secretion of cytokines. Hyperdegranulation of Coro1a−/− MCs is further augmented by the additional loss of Coro1b. In vivo, Coro1a−/−Coro1b−/− mice displayed enhanced passive cutaneous anaphylaxis. Functional reconstitution assays revealed that the inhibitory effect of Coro1a on MC degranulation strictly correlates with cortical localization of Coro1a, requires its filamentous actin–binding activity, and is regulated by phosphorylation of Ser2 of Coro1a. Thus, coronin proteins, and in turn the actin cytoskeleton, exhibit a functional dichotomy as differential regulators of degranulation versus cytokine secretion in MC biology.
- Published
- 2011
28. Characterizing isoform switching events in esophageal adenocarcinoma
- Author
-
Yun Zhang, Katherine M. Weh, Connor L. Howard, Jean-Jack Riethoven, Jennifer L. Clarke, Kiran H. Lagisetty, Jules Lin, Rishindra M. Reddy, Andrew C. Chang, David G. Beer, and Laura A. Kresty
- Subjects
MT: Bioinformatics ,esophageal adenocarcinoma ,Barrett’s esophagus ,isoform switching ,transcriptomics ,TP53 ,Therapeutics. Pharmacology ,RM1-950 - Abstract
Isoform switching events with predicted functional consequences are common in many cancers, but characterization of switching events in esophageal adenocarcinoma (EAC) is lacking. Next-generation sequencing was used to detect levels of RNA transcripts and identify specific isoforms in treatment-naïve esophageal tissues ranging from premalignant Barrett’s esophagus (BE), BE with low- or high-grade dysplasia (BE.LGD, BE.HGD), and EAC. Samples were stratified by histopathology and TP53 mutation status, identifying significant isoform switching events with predicted functional consequences. Comparing BE.LGD with BE.HGD, a histopathology linked to cancer progression, isoform switching events were identified in 75 genes including KRAS, RNF128, and WRAP53. Stratification based on TP53 status increased the number of significant isoform switches to 135, suggesting switching events affect cellular functions based on TP53 mutation and tissue histopathology. Analysis of isoforms agnostic, exclusive, and shared with mutant TP53 revealed unique signatures including demethylation, lipid and retinoic acid metabolism, and glucuronidation, respectively. Nearly half of isoform switching events were identified without significant gene-level expression changes. Importantly, two TP53-interacting isoforms, RNF128 and WRAP53, were significantly linked to patient survival. Thus, analysis of isoform switching events may provide new insight for the identification of prognostic markers and inform new potential therapeutic targets for EAC.
- Published
- 2022
- Full Text
- View/download PDF
29. B-cell targeted therapies in human autoimmune diseases: an updated perspective
- Author
-
Andrew C. Chan, John G. Monroe, and Michael J. Townsend
- Subjects
Systemic lupus erythematosus ,business.industry ,medicine.medical_treatment ,Immunology ,Immunotherapy ,medicine.disease ,Acquired immune system ,medicine.disease_cause ,Autoimmunity ,medicine.anatomical_structure ,Antigen ,medicine ,Immunology and Allergy ,Rituximab ,B-cell activating factor ,business ,B cell ,medicine.drug - Abstract
The advent of therapies that specifically target the B-lymphocyte lineage in human disease has rejuvenated interest in the mechanistic biology by which B cells mediate autoimmunity. B cells have a multitude of effector functions including production of self-reactive antibodies, ability to present antigen to T lymphocytes in the context of costimulation, involvement in generation and maintenance of neo-organogenesis at sites of disease, and opposing function through production of both immunostimulatory and immunomodulatory cytokines. In this review, we first discuss the role of B cells in driving autoimmune diseases such as rheumatoid arthritis, multiple sclerosis, systemic lupus erythematosus, and Sjogren's syndrome, and discuss how studies in these diseases have revealed differentially important roles for the multiple B-cell effector functions. These data reveal the complex and interrelated roles of B cells working in concert with other components of the innate and adaptive immune system to drive pathogenesis. We then focus on data from mouse and human in which B cells in the setting of disease have been targeted with drugs directed against CD20, CD22, and the BAFF (B-cell activating factor belonging to the tumor necrosis factor family)/APRIL (a proliferation inducing ligand) pathways. Pre-clinical studies in animal models in addition to and clinical trials targeting B cells have added further to the understanding of the differential roles B cells play in disease both through demonstration of clinical efficacy in the context of B-cell depletion or modulation, and also by failure of B-cell targeting in some diseases and disease patient subgroups. Moving forward, it will be imperative to apply these lessons to new interventional trials to ensure better targeting of the B-cell lineage and concomitantly better selection of patients most likely to benefit from these therapies.
- Published
- 2010
- Full Text
- View/download PDF
30. Therapeutic antibodies for autoimmunity and inflammation
- Author
-
Andrew C. Chan and Paul Carter
- Subjects
History ,Inflammation ,medicine.disease_cause ,Autoimmune Diseases ,Education ,Autoimmunity ,Antibodies, Bispecific ,Animals ,Humans ,Medicine ,Clinical efficacy ,biology ,business.industry ,Antibody-Dependent Cell Cytotoxicity ,Antibodies, Monoclonal ,First generation ,Computer Science Applications ,Antibody-dependent cell cytotoxicity ,Immunology ,biology.protein ,Cytokines ,Intercellular Signaling Peptides and Proteins ,Antibody ,medicine.symptom ,business ,Half-Life - Abstract
The development of therapeutic antibodies has evolved over the past decade into a mainstay of therapeutic options for patients with autoimmune and inflammatory diseases. Substantial advances in understanding the biology of human diseases have been made and tremendous benefit to patients has been gained with the first generation of therapeutic antibodies. The lessons learnt from these antibodies have provided the foundation for the discovery and development of future therapeutic antibodies. Here we review how key insights obtained from the development of therapeutic antibodies complemented by newer antibody engineering technologies are delivering a second generation of therapeutic antibodies with promise for greater clinical efficacy and safety.
- Published
- 2010
- Full Text
- View/download PDF
31. Regulation of T Cell Receptor Signaling by DENND1B in TH2 Cells and Allergic Disease
- Author
-
Brian L. Yaspan, Meijuan Zhou, Wyne P. Lee, Caroline Hojer, Chiao-Wen Yang, Xiumin Wu, Arthur Wuster, and Andrew C. Chan
- Subjects
0301 basic medicine ,Death Domain Receptor Signaling Adaptor Proteins ,Regulator ,Receptors, Antigen, T-Cell ,Biology ,Lymphocyte Activation ,Polymorphism, Single Nucleotide ,General Biochemistry, Genetics and Molecular Biology ,03 medical and health sciences ,Mice ,Immune system ,Th2 Cells ,Antigen ,Hypersensitivity ,Cytotoxic T cell ,Animals ,Guanine Nucleotide Exchange Factors ,Humans ,Receptor ,Biochemistry, Genetics and Molecular Biology(all) ,Effector ,T-cell receptor ,Dendritic Cells ,Asthma ,Cell biology ,030104 developmental biology ,rab GTP-Binding Proteins ,Cytokines ,Female ,Signal transduction ,Signal Transduction - Abstract
The DENN domain is an evolutionary conserved protein module found in all eukaryotes and serves as an exchange factor for Rab-GTPases to regulate diverse cellular functions. Variants in DENND1B are associated with development of childhood asthma and other immune disorders. To understand how DENND1B may contribute to human disease, Dennd1b(-/-) mice were generated and exhibit hyper-allergic responses following antigen challenge. Dennd1b(-/-) TH2, but not other TH cells, exhibit delayed receptor-induced T cell receptor (TCR) downmodulation, enhanced TCR signaling, and increased production of effector cytokines. As DENND1B interacts with AP-2 and Rab35, TH2 cells deficient in AP-2 or Rab35 also exhibit enhanced TCR-mediated effector functions. Moreover, human TH2 cells carrying asthma-associated DENND1B variants express less DENND1B and phenocopy Dennd1b(-/-) TH2 cells. These results provide a molecular basis for how DENND1B, a previously unrecognized regulator of TCR downmodulation in TH2 cells, contributes to asthma pathogenesis and how DENN-domain-containing proteins may contribute to other human disorders.
- Published
- 2015
32. Requirement for Coronin 1 in T Lymphocyte Trafficking and Cellular Homeostasis
- Author
-
Niko Föger, Linda Rangell, Andrew C. Chan, and Dimitry M. Danilenko
- Subjects
CD4-Positive T-Lymphocytes ,Talin ,Cell Survival ,T-Lymphocytes ,Receptors, Antigen, T-Cell ,Coronin ,Cellular homeostasis ,Apoptosis ,macromolecular substances ,Actin-Related Protein 2-3 Complex ,Membrane Potentials ,Mice ,T-Lymphocyte Subsets ,Lymphocyte homeostasis ,Animals ,Homeostasis ,Receptor ,Actin ,Multidisciplinary ,biology ,Microfilament Proteins ,Cell Polarity ,Cell migration ,Intracellular Membranes ,T lymphocyte ,Adoptive Transfer ,Actins ,Mitochondria ,Cell biology ,Mice, Inbred C57BL ,Chemotaxis, Leukocyte ,Gene Targeting ,biology.protein ,Lymph Nodes - Abstract
The evolutionarily conserved actin-related protein (Arp2/3) complex is a key component of actin filament networks that is dynamically regulated by nucleation-promoting and inhibitory factors. Although much is known about actin assembly, the physiologic functions of inhibitory proteins are unclear. We generated coronin 1 –/– mice and found that coronin 1 exerted an inhibitory effect on cellular steady-state F-actin formation via an Arp2/3-dependent mechanism. Whereas coronin 1 was required for chemokine-mediated migration, it was dispensable for T cell antigen receptor functions in T cells. Moreover, actin dynamics, through a mitochondrial pathway, was linked to lymphocyte homeostasis.
- Published
- 2006
- Full Text
- View/download PDF
33. B CELL IMMUNOBIOLOGY IN DISEASE: Evolving Concepts from the Clinic
- Author
-
Andrew C. Chan and Flavius Martin
- Subjects
Primates ,Cell Survival ,Lymphoid Tissue ,T-Lymphocytes ,T cell ,Immunology ,Receptors, Antigen, B-Cell ,Autoimmunity ,Antigen-Antibody Complex ,Disease ,Lymphocyte Activation ,medicine.disease_cause ,Lymphocyte Depletion ,Autoimmune Diseases ,Mice ,Immune system ,Antigens, CD ,Animals ,Humans ,Immunology and Allergy ,Medicine ,B cell ,Autoantibodies ,CD20 ,B-Lymphocytes ,biology ,business.industry ,Models, Immunological ,Autoantibody ,Antibodies, Monoclonal ,medicine.anatomical_structure ,biology.protein ,business ,Cytokine synthesis - Abstract
The pathogenic roles of B cells in autoimmune diseases occur through several mechanistic pathways that include autoantibodies, immune complexes, dendritic and T cell activation, cytokine synthesis, chemokine-mediated functions, and ectopic neolymphogenesis. Each of these pathways participate to different degrees in autoimmune diseases. The use of B cell–targeted and B cell subset–targeted therapies in humans is illuminating the mechanisms at work in a variety of human autoimmune diseases. In this review, we highlight some of these recent findings that provide insights into both murine models of autoimmunity and human autoimmune diseases.
- Published
- 2006
- Full Text
- View/download PDF
34. The role of receptor internalization in CD95 signaling
- Author
-
Robert Schickel, Vladimir Tchikov, Kyeong-Hee Lee, Andrew C. Chan, Stefan Schütze, Christine Feig, Cora Hallas, and Marcus E. Peter
- Subjects
MAPK/ERK pathway ,Death Domain Receptor Signaling Adaptor Proteins ,Fas Ligand Protein ,Endosome ,Fas-Associated Death Domain Protein ,media_common.quotation_subject ,education ,Apoptosis ,Endosomes ,Biology ,Caspase 8 ,Article ,General Biochemistry, Genetics and Molecular Biology ,hemic and lymphatic diseases ,Humans ,fas Receptor ,Receptor ,Internalization ,Molecular Biology ,Adaptor Proteins, Signal Transducing ,media_common ,Membrane Glycoproteins ,General Immunology and Microbiology ,General Neuroscience ,NF-kappa B ,hemic and immune systems ,Fas receptor ,Clathrin ,Endocytosis ,Tumor Necrosis Factor Receptor-Associated Peptides and Proteins ,Cell biology ,Enzyme Activation ,Caspases ,Tumor Necrosis Factors ,Death-inducing signaling complex ,Mitogen-Activated Protein Kinases ,biological phenomena, cell phenomena, and immunity ,Signal transduction ,Signal Transduction ,Subcellular Fractions - Abstract
Activation of the cell surface CD95 receptor triggers a cascade of signaling events, including assembly of the death-inducing signaling complex (DISC), that culminate in cellular apoptosis. In this study, we demonstrate a general requirement of receptor internalization for CD95 ligand-mediated DISC amplification, caspase activation and apoptosis in type I cells. Recruitment of DISC components to the activated receptor predominantly occurs after the receptor has moved into an endosomal compartment and blockade of CD95 internalization impairs DISC formation and apoptosis. In contrast, CD95 ligand stimulation of cells unable to internalize CD95 results in activation of proliferative Erk and NF-kappaB signaling pathways. Hence, the subcellular localization and internalization pathways of CD95 play important roles in controlling activation of distinct signaling cascades to determine divergent cellular fates.
- Published
- 2006
- Full Text
- View/download PDF
35. Immune response in silico (IRIS): immune-specific genes identified from a compendium of microarray expression data
- Author
-
Daryl T. Baldwin, P M Williams, Wenjun Ouyang, Paulj. Godowski, Flavius Martin, M. van Lookeren Campagne, Alexander R. Abbas, Andrew C. Chan, A. Gurney, Hilary Clark, Sherman Fong, and Y Ma
- Subjects
Genetics ,Gene Expression Profiling ,animal diseases ,In silico ,Immunology ,Immunity ,chemical and pharmacologic phenomena ,Computational biology ,Immunogenetics ,biochemical phenomena, metabolism, and nutrition ,Biology ,Acquired immune system ,Immune system ,Gene Expression Regulation ,Humans ,bacteria ,Gene family ,Signal transduction ,Gene ,Genetics (clinical) ,Cellular localization ,Oligonucleotide Array Sequence Analysis ,Signal Transduction - Abstract
Immune cell-specific expression is one indication of the importance of a gene's role in the immune response. We have compiled a compendium of microarray expression data for virtually all human genes from six key immune cell types and their activated and differentiated states. Immune Response In Silico (IRIS) is a collection of genes that have been selected for specific expression in immune cells. The expression pattern of IRIS genes recapitulates the phylogeny of immune cells in terms of the lineages of their differentiation. Gene Ontology assignments for IRIS genes reveal significant involvement in inflammation and immunity. Genes encoding CD antigens, cytokines, integrins and many other gene families playing key roles in the immune response are highly represented. IRIS also includes proteins of unknown function and expressed sequence tags that may not represent genes. The predicted cellular localization of IRIS proteins is evenly distributed between cell surface and intracellular compartments, indicating that immune specificity is important at many points in the signaling pathways of the immune response. IRIS provides a resource for further investigation into the function of the immune system and immune diseases.
- Published
- 2005
- Full Text
- View/download PDF
36. Importance of Cellular Microenvironment and Circulatory Dynamics in B Cell Immunotherapy
- Author
-
Yongmei Chen, Zhilan Hu, Jennine Cornelius, Yifan Zhang, Yanmei Lu, Andrew C. Chan, Qian Gong, Wyne P. Lee, Kathy Nguyen, Peter Gribling, Thanhvien Tran, Flavius Martin, Yan Wu, Y. Gloria Meng, Hugh Rosen, Lauri Diehl, Zhonghua Lin, Shiming Ye, Qinglin Ou, and Wei Yu Lin
- Subjects
Cell Survival ,Transgene ,medicine.medical_treatment ,Immunology ,B-Lymphocyte Subsets ,Mice, Transgenic ,Biology ,Lymphocyte Depletion ,Mice ,Antigen ,B cell homeostasis ,medicine ,Animals ,Humans ,Immunology and Allergy ,B-cell activating factor ,Mononuclear Phagocyte System ,B cell ,CD20 ,Microcirculation ,Immunization, Passive ,Antibodies, Monoclonal ,Complement System Proteins ,Immunotherapy ,Antigens, CD20 ,medicine.anatomical_structure ,Liver ,biology.protein ,Binding Sites, Antibody ,Disease Susceptibility ,Antibody ,Spleen - Abstract
B cell immunotherapy has emerged as a mainstay in the treatment of lymphomas and autoimmune diseases. Although the microenvironment has recently been demonstrated to play critical roles in B cell homeostasis, its contribution to immunotherapy is unknown. To analyze the in vivo factors that regulate mechanisms involved in B cell immunotherapy, we used a murine model for human CD20 (hCD20) expression in which treatment of hCD20+ mice with anti-hCD20 mAbs mimics B cell depletion observed in humans. We demonstrate in this study that factors derived from the microenvironment, including signals from the B cell-activating factor belonging to the TNF family/BLyS survival factor, integrin-regulated homeostasis, and circulatory dynamics of B cells define distinct in vivo mechanism(s) and sensitivities of cells in anti-hCD20 mAb-directed therapies. These findings provide new insights into the mechanisms of immunotherapy and define new opportunities in the treatment of cancers and autoimmune diseases.
- Published
- 2005
- Full Text
- View/download PDF
37. Pathogenic Roles of B Cells in Human Autoimmunity
- Author
-
Andrew C. Chan and Flavius Martin
- Subjects
business.industry ,medicine.medical_treatment ,Immunology ,Autoantibody ,Immunotherapy ,medicine.disease_cause ,Autoimmunity ,Immune system ,Infectious Diseases ,Immunity ,medicine ,Immunology and Allergy ,business - Abstract
The pathogenic roles of B cells in human autoimmune diseases involve a multitude of mechanistic pathways and include the well-established contributions of autoantibodies and immune complexes that induce local inflammatory reactions and tissue destruction. Recent results using several novel B cell-directed therapies have provided new insights into additional roles of B cells in human autoimmunity. In this review, we will highlight some of these studies and discuss how clinical insights parallel murine models of normal immunity and autoimmunity.
- Published
- 2004
- Full Text
- View/download PDF
38. Silicon Photonics Cloud (SiCloud)
- Author
-
M. Lynch, Andrew C. Chan, C. Carmona, Yunshan Jiang, Peter T. S. DeVore, Bahram Jalali, Jost Adam, K. Muniam, and T. Miyatake
- Subjects
Materials science ,Silicon ,Optical communication ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,chemistry.chemical_element ,Physics::Optics ,engineering education ,Cloud computing ,optical communications ,GeneralLiterature_MISCELLANEOUS ,law.invention ,law ,ComputingMethodologies_COMPUTERGRAPHICS ,Silicon photonics ,guided waves ,business.industry ,biophotonics ,ntegrated optics ,Biophotonics ,data centers ,Semiconductor ,chemistry ,Optoelectronics ,simulations ,Photonics ,business ,Waveguide - Abstract
Silicon Photonics Cloud (SiCloud.org) is the first silicon photonics interactive web tool. Here we report new features of this tool including mode propagation parameters and mode distribution galleries for user specified waveguide dimensions and wavelengths.
- Published
- 2015
- Full Text
- View/download PDF
39. BLNK: molecular scaffolding through 'cis'-mediated organization of signaling proteins
- Author
-
Christopher W. Chiu, Andrew C. Chan, Masamichi Ishiai, Mark Dalton, and Tomohiro Kurosaki
- Subjects
Receptors, Antigen, B-Cell ,Biology ,General Biochemistry, Genetics and Molecular Biology ,Mice ,Agammaglobulinaemia Tyrosine Kinase ,Animals ,Humans ,Phosphorylation ,Tyrosine ,Receptor ,Molecular Biology ,Adaptor Proteins, Signal Transducing ,B-Lymphocytes ,Binding Sites ,General Immunology and Microbiology ,Phospholipase C gamma ,General Neuroscience ,Signal transducing adaptor protein ,Articles ,Protein-Tyrosine Kinases ,Phosphoproteins ,Cell biology ,Isoenzymes ,Type C Phospholipases ,Second messenger system ,Calcium ,Mitogen-Activated Protein Kinases ,Signal transduction ,Carrier Proteins ,B-Cell Linker Protein ,Intracellular ,Signal Transduction - Abstract
Assembly of intracellular macromolecular complexes is thought to provide an important mechanism to coordinate the generation of second messengers upon receptor activation. We have previously identified a B cell linker protein, termed BLNK, which serves such a scaffolding function in B cells. We demonstrate here that phosphorylation of five tyrosine residues within human BLNK nucleates distinct signaling effectors following B cell antigen receptor activation. The phosphorylation of multiple tyrosine residues not only amplifies PLCgamma-mediated signaling but also supports 'cis'-mediated interaction between distinct signaling effectors within a large molecular complex. These data demonstrate the importance of coordinate phosphorylation of molecular scaffolds, and provide insights into how assembly of macromolecular complexes is required for normal receptor function.
- Published
- 2002
- Full Text
- View/download PDF
40. Dusp5 negatively regulates IL-33-mediated eosinophil survival and function
- Author
-
Derek A. Holmes, Min Xu, Andrew C. Chan, Donghong Yan, and Jung-Hua Yeh
- Subjects
MAPK/ERK pathway ,medicine.medical_treatment ,Blotting, Western ,Bcl-xL ,Enzyme-Linked Immunosorbent Assay ,Real-Time Polymerase Chain Reaction ,General Biochemistry, Genetics and Molecular Biology ,Mice ,Downregulation and upregulation ,medicine ,Animals ,Humans ,RNA, Messenger ,Receptor ,Protein kinase A ,Molecular Biology ,Cells, Cultured ,Strongylida Infections ,Mice, Knockout ,General Immunology and Microbiology ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,General Neuroscience ,Interleukins ,Articles ,Eosinophil ,Interleukin-33 ,Cell biology ,Interleukin 33 ,DNA-Binding Proteins ,Eosinophils ,Killer Cells, Natural ,medicine.anatomical_structure ,Cytokine ,biology.protein ,Dual-Specificity Phosphatases ,Female ,Nippostrongylus - Abstract
Mitogen-activated protein kinase (MAPK) activation controls diverse cellular functions including cellular survival, proliferation, and apoptosis. Tuning of MAPK activation is counter-regulated by a family of dual-specificity phosphatases (DUSPs). IL-33 is a recently described cytokine that initiates Th2 immune responses through binding to a heterodimeric IL-33Rα (ST2L)/IL-1α accessory protein (IL-1RAcP) receptor that coordinates activation of ERK and NF-κB pathways. We demonstrate here that DUSP5 is expressed in eosinophils, is upregulated following IL-33 stimulation and regulates IL-33 signaling. Dusp5(-/-) mice have prolonged eosinophil survival and enhanced eosinophil effector functions following infection with the helminth Nippostrongylus brasiliensis. IL-33-activated Dusp5(-/-) eosinophils exhibit increased cellular ERK1/2 activation and BCL-XL expression that results in enhanced eosinophil survival. In addition, Dusp5(-/-) eosinophils demonstrate enhanced IL-33-mediated activation and effector functions. Together, these data support a role for DUSP5 as a novel negative regulator of IL-33-dependent eosinophil function and survival.
- Published
- 2014
41. Pillars article: Sequential interactions of the TCR with two distinct cytoplasmic tyrosine kinases. Science. 1994. 263: 1136-1139
- Author
-
Makio, Iwashima, Bryan A, Irving, Nicolai S C, van Oers, Andrew C, Chan, and Arthur, Weiss
- Subjects
Cytoplasm ,Receptors, Antigen, T-Cell ,History, 20th Century ,Protein-Tyrosine Kinases ,Protein Binding - Published
- 2014
42. Accumulation of 4-1BBL+ B cells in the elderly induces the generation of granzyme-B+ CD8+ T cells with potential antitumor activity
- Author
-
Luigi Ferrucci, Julie A. Mattison, Frances T. Hakim, Arya Biragyn, Catalina Lee-Chang, Kanako Moritoh, Peter Johannes Holst, Michael Croft, Monica Bodogai, Andrew C. Chan, Purevdorj B. Olkhanud, and Ronald E. Gress
- Subjects
Adult ,Male ,Aging ,Immunology ,B-Lymphocyte Subsets ,Melanoma, Experimental ,Mice, Transgenic ,CD8-Positive T-Lymphocytes ,Biochemistry ,Granzymes ,Interleukin 21 ,Mice ,Tumor Necrosis Factor Receptor Superfamily, Member 9 ,Cytotoxic T cell ,Animals ,Humans ,Antigen-presenting cell ,Aged ,Immunobiology ,Aged, 80 and over ,Mice, Knockout ,Immunity, Cellular ,CD40 ,biology ,ZAP70 ,Cell Biology ,Hematology ,Middle Aged ,Acquired immune system ,Macaca mulatta ,Immunity, Innate ,Granzyme B ,Mice, Inbred C57BL ,4-1BB Ligand ,Granzyme ,Cancer research ,biology.protein ,Female ,hormones, hormone substitutes, and hormone antagonists ,Signal Transduction - Abstract
Although the accumulation of highly-differentiated and granzyme B (GrB)-expressing CD8(+)CD28(-) T cells has been associated with aging, the mechanism for their enrichment and contribution to immune function remains poorly understood. Here we report a novel B-cell subset expressing 4-1BBL, which increases with age in humans, rhesus macaques, and mice, and with immune reconstitution after chemotherapy and autologous progenitor cell transplantation. These cells (termed 4BL cells) induce GrB(+)CD8(+) T cells by presenting endogenous antigens and using the 4-1BBL/4-1BB axis. We found that the 4BL cells increase antitumor responses in old mice, which may explain in part the paradox of retarded tumor growth in the elderly. 4BL cell accumulation and its capacity to evoke the generation of GrB(+)CD8(+) T cells can be eliminated by inducing reconstitution of B cells in old mice, suggesting that the age-associated skewed cellular immune responses are reversible. We propose that 4BL cells and the 4-1BBL signaling pathway are useful targets for improved effectiveness of natural antitumor defenses and therapeutic immune manipulations in the elderly.
- Published
- 2014
43. Attenuation of near-IR light through dentin at wavelengths from 1300-1650-nm
- Author
-
Andrew C. Chan, Daniel Fried, Cynthia L. Darling, Kenneth H. Chan, Rechmann, Peter, and Fried, Daniel
- Subjects
Materials science ,Enamel paint ,Opacity ,medicine.diagnostic_test ,business.industry ,Attenuation ,Bioengineering ,Transillumination ,dentin ,light scattering ,Article ,Light scattering ,Collimated light ,stomatognathic diseases ,medicine.anatomical_structure ,Optics ,stomatognathic system ,Optical coherence tomography ,visual_art ,visual_art.visual_art_medium ,medicine ,Dentin ,near-IR imaging ,Dental/Oral and Craniofacial Disease ,business - Abstract
Light scattering in dental enamel decreases markedly from the UV to the near-IR and recent studies employing near-IR transillumination and reflectance imaging including optical coherence tomography indicate that this wavelength region is ideally suited for imaging dental caries due to the high transparency of enamel. The opacity of dentin is an important factor in optimizing the contrast of demineralization in reflectance measurements. It also influences the contrast of occlusal lesions in transillumination. Light scattering in dentin is an order of magnitude larger than in enamel, it is highly anisotropic and has a different spectral light scattering dependence than enamel. The objective of this study was to measure the optical attenuation of near-IR light through dentin at near-IR wavelengths from 1300–1650-nm. In this study the collimated transmission of near-IR light through polished thin sections of dentin of 0.05 to 0.6 mm thickness was measured. Beer-Lambert plots show that the attenuation coefficients range in magnitude from 20 to 40 cm−1. Attenuation increased significantly with increasing wavelength and the increases were not entirely consistent with increased water absorption.
- Published
- 2014
44. Epstein-Barr Virus Latent Membrane Protein 2a (Lmp2a) Employs the Slp-65 Signaling Module
- Author
-
Andrew C. Chan, Jürgen Wienands, Richard Longnecker, Niklas Engels, Rajita Pappu, and Mark Merchant
- Subjects
Male ,Epstein-Barr Virus Infections ,Herpesvirus 4, Human ,Protein tyrosine phosphatase ,Mice ,chemistry.chemical_compound ,0302 clinical medicine ,hemic and lymphatic diseases ,Immunology and Allergy ,Enzyme Inhibitors ,Phosphorylation ,Nuclear protein ,Mice, Knockout ,B-Lymphocytes ,Enzyme Precursors ,0303 health sciences ,Intracellular Signaling Peptides and Proteins ,Nuclear Proteins ,Signal transducing adaptor protein ,Protein-Tyrosine Kinases ,3. Good health ,Isoenzymes ,SLP-65 ,030220 oncology & carcinogenesis ,Female ,Original Article ,Signal transduction ,signal transduction ,Proto-oncogene tyrosine-protein kinase Src ,Immunology ,antigen receptor ,Mice, Transgenic ,Biology ,Cell Line ,Viral Matrix Proteins ,03 medical and health sciences ,Animals ,Humans ,Syk Kinase ,Epstein-Barr virus ,Adaptor Proteins, Signal Transducing ,DNA Primers ,030304 developmental biology ,Base Sequence ,Phospholipase C gamma ,Tyrosine phosphorylation ,Hydrogen Peroxide ,Phosphoproteins ,Molecular biology ,CRKL ,chemistry ,Type C Phospholipases ,Tyrosine ,Protein Tyrosine Phosphatases ,Vanadates ,Carrier Proteins ,B lymphocytes - Abstract
In latently infected B lymphocytes, the Epstein-Barr virus (EBV) suppresses signal transduction from the antigen receptor through expression of the integral latent membrane protein 2A (LMP2A). At the same time, LMP2A triggers B cell survival by a yet uncharacterized maintenance signal that is normally provided by the antigen receptor. The molecular mechanisms are unknown as LMP2A-regulated signaling cascades have not been described so far. Using a novel mouse model we have identified the intracellular adaptor protein Src homology 2 (SH2) domain–containing leukocyte protein (SLP)-65 as a critical downstream effector of LMP2A in vivo. Biochemical analysis of the underlying signaling pathways revealed that EBV infection causes constitutive tyrosine phosphorylation of one of the two SLP-65 isoforms and complex formation between SLP-65 and the protooncoprotein CrkL (CT10 regulator of kinase like). This leads to antigen receptor-independent phosphorylation of Cbl (Casitas B lineage lymphoma) and C3G. In contrast, phospholipase C-γ2 (PLC-γ2) activation is completely blocked. Our data show that in order to establish a latent EBV infection, LMP2A selectively activates or represses SLP-65–regulated signaling pathways.
- Published
- 2001
- Full Text
- View/download PDF
45. Requirement for Tyrosine Residues 315 and 319 within ζ Chain–Associated Protein 70 for T Cell Development
- Author
-
Julie Bubeck Wardenburg, Andrew C. Chan, Xiaohua Jin, Qian Gong, Michael A. White, Guoqing Gong, Niko Foger, and Antonina Akk
- Subjects
T cell ,T-Lymphocytes ,Immunology ,chemical and pharmacologic phenomena ,T cell selection ,Mice, Transgenic ,lymphocyte development ,Biology ,03 medical and health sciences ,Negative selection ,Mice ,0302 clinical medicine ,medicine ,Immunology and Allergy ,Animals ,Tyrosine ,Receptor ,030304 developmental biology ,0303 health sciences ,T cell activation ,T-cell receptor ,hemic and immune systems ,Receptors, Antigen, T-Cell, gamma-delta ,protein tyrosine kinases ,Molecular biology ,medicine.anatomical_structure ,Second messenger system ,Phosphorylation ,Original Article ,Tyrosine kinase ,signal transduction ,030215 immunology - Abstract
Engagement of the T cell antigen receptor (TCR) induces the transphosphorylation of the ζ chain–associated protein of 70,000 Mr (ZAP-70) protein tyrosine kinase (PTK) by the CD4/8 coreceptor associated Lck PTK. Phosphorylation of Tyr 493 within ZAP-70's activation loop results in the enzymatic activation of ZAP-70. Additional tyrosines (Tyrs) within ZAP-70 are phosphorylated that play both positive and negative regulatory roles in TCR function. Phosphorylation of Tyr residues (Tyrs 315 and 319) within the Interdomain B region of the ZAP-70 PTK plays important roles in the generation of second messengers after TCR engagement. Here, we demonstrate that phosphorylation of these two Tyr residues also play important roles in mediating the positive and negative selection of T cells in the thymus.
- Published
- 2001
46. Signaling Takes Shape in the Immune System
- Author
-
Andrew C. Chan and Michael L. Dustin
- Subjects
World Wide Web ,Biochemistry, Genetics and Molecular Biology(all) ,Immunology ,Biology ,Graphics ,General Biochemistry, Genetics and Molecular Biology - Abstract
We thank Jerri Smith for preparation of the manuscript and Daved Fremont for help with the graphics. We also thank the reviewers and editor for their suggestions on improving the manuscript. We apologize to colleagues whose work could not be directly cited due to length constraints.
- Published
- 2000
- Full Text
- View/download PDF
47. Regulation of B cell function by linker proteins
- Author
-
Michael E Kelly and Andrew C. Chan
- Subjects
B-Lymphocytes ,GTPase-activating protein ,Immunology ,B-cell receptor ,Models, Immunological ,Proteins ,Receptors, Antigen, B-Cell ,Signal transducing adaptor protein ,Protein-Tyrosine Kinases ,BCR Signaling Pathway ,Biology ,Second Messenger Systems ,Cell biology ,Second messenger system ,Immunology and Allergy ,Signal transduction ,Autocrine signalling ,Linker - Abstract
Studies over the past few years have demonstrated the importance of linker or adaptor proteins in the signaling pathways activated by the B cell antigen-receptor. These proteins direct the appropriate subcellular localization of enzymatic complexes, amplify signaling pathways and integrate the functions of distinct signaling complexes. Many of the recently identified linker proteins function through these distinct mechanisms to upregulate the BCR signaling pathway. In addition, linker proteins facilitate the influences of co-receptors that augment or dampen the BCR signaling pathway.
- Published
- 2000
- Full Text
- View/download PDF
48. An Essential Role for BLNK in Human B Cell Development
- Author
-
Jurg Rohrer, Andrew C. Chan, Howard M. Lederman, Yoshiyuki Minegishi, Dario Campana, Mary Ellen Conley, Elaine Coustan-Smith, and Rajita Pappu
- Subjects
Adult ,Male ,Antigens, CD19 ,Molecular Sequence Data ,Cell ,Gene Rearrangement, B-Lymphocyte, Heavy Chain ,Antigens, CD34 ,Bone Marrow Cells ,Biology ,Immune system ,Agammaglobulinemia ,Agammaglobulinaemia Tyrosine Kinase ,medicine ,Humans ,Point Mutation ,B cell ,Adaptor Proteins, Signal Transducing ,Progenitor ,B-Lymphocytes ,Multidisciplinary ,Transition (genetics) ,Reverse Transcriptase Polymerase Chain Reaction ,Chromosome Mapping ,Cell Differentiation ,Protein-Tyrosine Kinases ,Hematopoietic Stem Cells ,Phosphoproteins ,Cell biology ,medicine.anatomical_structure ,Immunology ,Signal transduction ,Carrier Proteins ,B-Cell Linker Protein ,Function (biology) ,Signal Transduction - Abstract
The signal transduction events that control the progenitor B cell (pro-B cell) to precursor B cell (pre-B cell) transition have not been well delineated. In evaluating patients with absent B cells, a male with a homozygous splice defect in the cytoplasmic adapter protein BLNK (B cell linker protein) was identified. Although this patient had normal numbers of pro-B cells, he had no pre-B cells or mature B cells, indicating that BLNK plays a critical role in orchestrating the pro-B cell to pre-B cell transition. The immune system and overall growth and development were otherwise normal in this patient, suggesting that BLNK function is highly specific.
- Published
- 1999
- Full Text
- View/download PDF
49. Phosphorylation of Tyr319 in ZAP-70 is required for T-cell antigen receptor-dependent phospholipase C-gamma 1 and Ras activation
- Author
-
Claudia C. S. Chini, Brandi L. Williams, Juliane Bubeck Wardenburg, Brenda J. Irvin, Robert T. Abraham, Mark Dalton, Andrew C. Chan, Elaine Yacyshyn, and Shari L. Sutor
- Subjects
Syk ,SH2 domain ,Jurkat cells ,Phosphorylation cascade ,chemistry.chemical_compound ,Catalytic Domain ,Mitogen-Activated Protein Kinase 1 ,Mitogen-Activated Protein Kinase 3 ,ZAP-70 Protein-Tyrosine Kinase ,General Neuroscience ,Nuclear Proteins ,hemic and immune systems ,Protein-Tyrosine Kinases ,Cell biology ,DNA-Binding Proteins ,Isoenzymes ,Phosphorylation ,Mitogen-Activated Protein Kinases ,Tyrosine kinase ,Research Article ,Receptors, Antigen, T-Cell ,chemical and pharmacologic phenomena ,Biology ,Models, Biological ,General Biochemistry, Genetics and Molecular Biology ,Cell Line ,src Homology Domains ,Animals ,Humans ,Point Mutation ,Molecular Biology ,Adaptor Proteins, Signal Transducing ,DNA Primers ,Binding Sites ,Base Sequence ,NFATC Transcription Factors ,General Immunology and Microbiology ,Phospholipase C gamma ,T-cell receptor ,Membrane Proteins ,Tyrosine phosphorylation ,Phosphoproteins ,Molecular biology ,Enzyme Activation ,chemistry ,Lymphocyte Specific Protein Tyrosine Kinase p56(lck) ,Type C Phospholipases ,Calcium-Calmodulin-Dependent Protein Kinases ,ras Proteins ,Calcium ,Carrier Proteins ,Transcription Factors - Abstract
Accumulating evidence indicates that the interdomain B regions of ZAP-70 and Syk play pivotal roles in the coupling of T-cell antigen receptor (TCR) stimulation to the activation of downstream signaling pathways. The interdomain B region of ZAP-70 contains at least three candidate sites of tyrosine phosphorylation. In this report, we identify Tyr319 as a functionally important phosphorylation site in the ZAP-70 interdomain B region. TCR crosslinkage triggered a rapid increase in the phosphorylation of Tyr319 in Jurkat T cells. Although mutation of Tyr319 to Phe had no effect on the tyrosine kinase activity of ZAP-70, the resulting ZAP(Y319-->F) mutant failed to reconstitute TCR-dependent Ca2+ mobilization, Ras activation, CD69 expression and NFAT-dependent transcription in ZAP-70-deficient Jurkat cells. These defects were correlated with reduced tyrosine phosphorylation of phospholipase C (PLC)-gamma1 and the LAT adapter protein in the ZAP(Y319-->F)-expressing cells. On the other hand, ZAP(Y319-->F)-expressing cells displayed normal increases in SLP-76 phosphorylation and ERK activation during TCR stimulation. Phosphorylation of Tyr319 promoted the association of ZAP-70 with the SH2 domains of two key signaling molecules, Lck and PLC-gamma1. These studies suggest that Tyr319 phosphorylation is required for the assembly of a ZAP-70-containing signaling complex that leads to the activation of the PLC-gamma1- and Ras-dependent signaling cascades in antigen-stimulated T cells.
- Published
- 1999
- Full Text
- View/download PDF
50. Structural basis for syk tyrosine kinase ubiquity in signal transduction pathways revealed by the crystal structure of its regulatory SH2 domains bound to a dually phosphorylated ITAM peptide
- Author
-
Richard A. Grucza, Andrew C. Chan, Gabriel Waksman, Jane Wong, and Klaus Fütterer
- Subjects
Models, Molecular ,Multiple isomorphous replacement ,Molecular Sequence Data ,Receptors, Antigen, T-Cell ,Syk ,chemical and pharmacologic phenomena ,Biology ,Crystallography, X-Ray ,SH2 domain ,environment and public health ,Protein Structure, Secondary ,src Homology Domains ,Structural Biology ,Syk Kinase ,Amino Acid Sequence ,Tyrosine ,Molecular Biology ,Enzyme Precursors ,Kinase ,T-cell receptor ,Intracellular Signaling Peptides and Proteins ,hemic and immune systems ,Protein-Tyrosine Kinases ,Phosphoproteins ,Cell biology ,Biochemistry ,Phosphorylation ,Signal transduction ,Oligopeptides ,Signal Transduction - Abstract
The Syk family of kinases, consisting of ZAP-70 and Syk, play essential roles in a variety of immune and non-immune cells. This family of kinases is characterized by the presence of two adjacent SH2 domains which mediate their localization to the membrane through receptor encoded tyrosine phosphorylated motifs. While these two kinases share many structural and functional features, the more ubiquitous nature of Syk has suggested that this kinase may accommodate a greater variety of motifs to mediate its function. We present the crystal structure of the tandem SH2 domain of Syk complexed with a dually phosphorylated ITAM peptide. The structure was solved by multiple isomorphous replacement at 3.0 A resolution. The asymmetric unit comprises six copies of the liganded protein, revealing a surprising flexibility in the relative orientation of the two SH2 domains. The C-terminal phosphotyrosine-binding site is very different from the equivalent region of ZAP-70, suggesting that in contrast to ZAP-70, the two SH2 domains of Syk can function as independent units. The conformational flexibility and structural independence of the SH2 modules of Syk likely provides the molecular basis for the more ubiquitous involvement of Syk in a variety of signal transduction pathways.
- Published
- 1998
- Full Text
- View/download PDF
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.