398 results on '"Amphidinium"'
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2. Exploring the potential of epigenetic chemicals to increase metabolite production in the dinoflagellate microalga Amphidinium carterae.
- Author
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Kichouh-Aiadi, S., Gallardo-Rodríguez, J. J., Cerón-García, M. C., López-Rosales, L., García-Camacho, F., and Sánchez-Mirón, A.
- Abstract
This study explores the use of chemical epigenetic modifiers to enhance the production of bioactive molecules in the dinoflagellate Amphidinium carterae. It was selected for its known ability to produce amphidinols with various pharmacological and agro-industrial applications. Growth inhibition, photosynthetic yield reduction, and stress-related variables were observed in response to different treatments using 5-azacitidine, hydroxamic suberoylanilide acid, metyrapone, tricyclazole, sodium butyrate, and jasplakinolide. Although no evidence of amphidinols overproduction was found, hydroxamic suberoylanilide acid and tricyclazole showed potential for stimulating the synthesis of antioxidant carotenoids such as peridinin and their derivatives. An increase of around 200% and 170% relative to control was observed at the highest non-lethal concentration. More research is required to elucidate the mechanisms underlying this response and to optimize production conditions. This pioneering research opens up new avenues for the biotechnological exploitation of dinoflagellate microalgae. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
3. Absorption Spectra as Predictors of Algal Biomass and Pigment Content of the Cultured Microalgae Amphidinium carterae, Isochrysis galbana, Nephroselmis sp., and Anabaena sp.
- Author
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George N. Hotos and Vlasoula Bekiari
- Subjects
microalgae ,pigments ,Amphidinium ,Isochrysis ,Nephroselmis ,Anabaena ,Science ,Biology (General) ,QH301-705.5 - Abstract
Background: In the search of a rapid and representative method for the approximate calculation of culture density and cell content of useful pigments, the study of absorption spectra of cultures of the dinoflagellate Amphidinium carterae, the haptophyte Isochrysis galbana, the chlorophyte Nephroselmis sp., and the filamentous cyanobacterium Anabaena sp. were selected as representative species of different taxa. Methods: The experimental cultures were established in small volumes by the discontinuous method under 20–21 °C, salinity of 30 or 40 ppt, and 2000 or 8000 lux illumination, and the absorbance spectra, density of the culture and concentration of the extracted pigments chlorophyll, total carotenoids, and phycocyanin were recorded during cultivation. Results: Algal density can be predicted sufficiently correctly because the regression equation of the correlation of the OD value of 750 nm from each absorption spectrum and the measured algal biomass was very strong. The same is true for the corresponding correlations between OD 750 nm and the detected pigments. Conclusions: Absorption spectra of microalgal cultures can be a simple, inexpensive, and non-invasive method for the growers to obtain the necessary information for predicting the right time to collect an ideal combination of maximum biomass and useful pigments, provided that the interpretation of the spectra is performed according to the method described herein.
- Published
- 2023
- Full Text
- View/download PDF
4. Absorption Spectra as Predictors of Algal Biomass and Pigment Content of the Cultured Microalgae Amphidinium carterae, Isochrysis galbana, Nephroselmis sp., and Anabaena sp.
- Author
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Hotos, George N. and Bekiari, Vlasoula
- Subjects
ABSORPTION spectra ,ANABAENA ,BIOMASS ,MICROALGAE ,PLANT pigments ,CELL culture ,GYMNODINIUM ,DUNALIELLA - Abstract
Background: In the search of a rapid and representative method for the approximate calculation of culture density and cell content of useful pigments, the study of absorption spectra of cultures of the dinoflagellate Amphidinium carterae, the haptophyte Isochrysis galbana, the chlorophyte Nephroselmis sp., and the filamentous cyanobacterium Anabaena sp. were selected as representative species of different taxa. Methods: The experimental cultures were established in small volumes by the discontinuous method under 20-21 °C, salinity of 30 or 40 ppt, and 2000 or 8000 lux illumination, and the absorbance spectra, density of the culture and concentration of the extracted pigments chlorophyll, total carotenoids, and phycocyanin were recorded during cultivation. Results: Algal density can be predicted sufficiently correctly because the regression equation of the correlation of the OD value of 750 nm from each absorption spectrum and the measured algal biomass was very strong. The same is true for the corresponding correlations between OD 750 nm and the detected pigments. Conclusions: Absorption spectra of microalgal cultures can be a simple, inexpensive, and non-invasive method for the growers to obtain the necessary information for predicting the right time to collect an ideal combination of maximum biomass and useful pigments, provided that the interpretation of the spectra is performed according to the method described herein. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
5. Amphidinium spp. as a Source of Antimicrobial, Antifungal, and Anticancer Compounds.
- Author
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Orefice, Ida, Balzano, Sergio, Romano, Giovanna, and Sardo, Angela
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METABOLITES , *ASPERGILLUS fumigatus , *ALGAL blooms , *POLYKETIDES , *ECOSYSTEM health , *GENETIC variation - Abstract
Dinoflagellates make up the second largest marine group of marine unicellular eukaryotes in the world ocean and comprise both heterotrophic and autotrophic species, encompassing a wide genetic and chemical diversity. They produce a plethora of secondary metabolites that can be toxic to other species and are mainly used against predators and competing species. Dinoflagellates are indeed often responsible for harmful algal bloom, where their toxic secondary metabolites can accumulate along the food chain, leading to significant damages to the ecosystem and human health. Secondary metabolites from dinoflagellates have been widely investigated for potential biomedical applications and have revealed multiple antimicrobial, antifungal, and anticancer properties. Species from the genus Amphidinium seem to be particularly interesting for the production of medically relevant compounds. The present review aims at summarising current knowledge on the diversity and the pharmaceutical properties of secondary metabolites from the genus Amphidinium. Specifically, Amphidinium spp. produce a range of polyketides possessing cytotoxic activities such as amphidinolides, caribenolides, amphidinins, and amphidinols. Potent antimicrobial properties against antibiotic-resistant bacterial strains have been observed for several amphidinins. Amphidinols revealed instead strong activities against infectious fungi such as Candida albicans and Aspergillus fumigatus. Finally, compounds such as amphidinolides, isocaribenolide-I, and chlorohydrin 2 revealed potent cytotoxic activities against different cancer cell lines. Overall, the wide variety of antimicrobial, antifungal, and anticancer properties of secondary metabolites from Amphidinium spp. make this genus a highly suitable candidate for future medical applications, spanning from cancer drugs to antimicrobial products that are alternatives to currently available antibiotic and antimycotic products. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
6. Galactolipids of the genus Amphidinium (Dinophyceae): an hypothesis that they are basal to those of other peridinin-containing dinoflagellates.
- Author
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Leblond, Jeffrey D., Elkins, Lindsey C., Graeff, Jori E., and Sabir, Kyra
- Subjects
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DINOFLAGELLATES , *FATTY acids , *SYMBIODINIUM , *HYPOTHESIS - Abstract
The genus Amphidinium is shown in many phylogenies to be basal to other peridinin-containing, photosynthetic dinoflagellates as one of the first photosynthetic genera to arise after the evolution of heterotrophic genera. As part of our continuing examination of the plastid-associated galactolipids, namely mono- and digalactosyldiacylglycerol (MGDG and DGDG, respectively), in dinoflagellates, we here examine the galactolipid composition of members of the genus Amphidinium. We show that this genus is characterized by an abundance of 20:5(n-3)/18:5(n-3) and 20:5(n-3)/18:4(n-3) forms of MGDG and DGDG (with sn-1/sn-2 regiochemical specificity of fatty acids), but also sometimes with generally lesser amounts of some polyunsaturated C18/C18 forms, thus placing the examined species within a previously identified cluster of C20/C18 MGDG- and DGDG-containing, peridinin-containing dinoflagellates. We also show that Testudodinium testudo, previously known as Amphidinium testudo, conversely falls within a previously identified C18/C18 cluster, indicating a distinct difference in galactolipid biosynthesis capability. While it is likely that further revision of the genus may occur in the future and/or more basal peridinin-containing, photosynthetic genera may be discovered, at the current time Amphidinium is the currently agreed-upon most basal dinoflagellate genus for which isolates are available for biochemical characterization such as what we describe in this paper. Thus, because of the presumed basal position of the genus Amphidinium, we present a hypothesis that its galactolipids currently represent those that are ancestral to other genera of peridinin-containing dinoflagellates, including those within the C18/C18 cluster. Amphidinium species' galactolipids reside within the C20/C18 peridinin dinoflagellate cluster. Conversely, Testudodinium testudo (formerly Amphidinium testudo) falls within the C18/C18 cluster. We hypothesize Amphidinium's galactolipids as basal to other peridinin dinoflagellates. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
7. Sterols of Amphidinium species in the Operculatum Clade: Predominance of cholesterol instead of Δ8(14) sterols previously considered Amphidinium‐specific biomarkers.
- Author
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Leblond, Jeffrey D., Elkins, Lindsey C., and Sabir, Kyra
- Subjects
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STEROLS , *BIOMARKERS , *SPECIES , *PHYTOSTEROLS , *DINOFLAGELLATES , *CHOLESTEROL - Abstract
The dinoflagellates Amphidinium carterae and Amphidinium corpulentum have been previously characterized as having Δ8(14)‐nuclear unsaturated 4α‐methyl‐5α‐cholest‐8(14)‐en‐3β‐ol (C28:1) and 4α‐methyl‐5α‐ergosta‐8(14),24(28)‐dien‐3β‐ol (amphisterol; C29:2) as predominant sterols, where they comprise approximately 80% of the total sterol composition. These two sterols have hence been considered as possible major sterol biomarkers for the genus. Here, we have examined the sterols of four recently identified species of Amphidinium (Amphidinium fijiense, Amphidinium magnum, Amphidinium theodori, and Amphidinium tomasii) that are closely related to Amphidinium operculatum as part of what is termed the Operculatum Clade to show that each species has its sterol composition dominated by the common dinoflagellate sterol cholesterol (cholest‐5‐en‐3β‐ol; C27:1), which is found in many other dinoflagellate genera, rather than Δ8(14) sterols. While the Δ8(14) sterols 4α‐methyl‐5α‐cholest‐8(14)‐en‐3β‐ol and 4α,23,24‐trimethyl‐5α‐cholest‐8(14),22E‐dien‐3β‐ol (C30:2) were present as minor sterols along with another common dinoflagellate sterol, 4α,23,24‐trimethyl‐5α‐cholest‐22E‐en‐3β‐ol (dinosterol; C30:1), in some of these four species, amphisterol was not conclusively observed. From a chemotaxonomic perspective, while this does reinforce the genus Amphidinium's ability to produce Δ8(14) sterols, albeit here as minor sterols, these results demonstrate that caution should be used when considering Δ8(14) sterols, especially amphisterol, as Amphidinium‐specific biomarkers within these species where cholesterol is the predominant sterol. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
8. Sterols of Testudodinium testudo (formerly Amphidinium testudo): Production of the Δ8(14) sterol gymnodinosterol and chemotaxonomic relationship to the Kareniaceae.
- Author
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Leblond, Jeffrey D., Elkins, Lindsey C., Sabir, Kyra, and Graeff, Jori E.
- Subjects
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STEROLS , *KARENIA brevis , *RIBOSOMAL RNA , *RIBOSOMAL DNA , *PHYTOSTEROLS , *CHOLESTEROL - Abstract
Testudodinium testudo is a peridinin‐containing dinoflagellate recently renamed from Amphidinium testudo. While T. testudo has been shown via phylogenetic analysis of small subunit ribosomal RNA genes to reside in a clade separate from the genus Amphidinium, it does possess morphological features similar to Amphidinium sensu stricto. Previous studies of Amphidinium carterae and Amphidinium corpulentum have found the sterols to be enriched in Δ8(14) sterols, such as 4α‐methyl‐5α‐ergosta‐8(14),24(28)‐dien‐3β‐ol (amphisterol), uncommon to most other dinoflagellate taxa and thus considered possible biomarkers for the genus Amphidinium. Here, we provide an examination of the sterols of T. testudo and show they are dominated not by amphisterol, but rather by a different Δ8(14) sterol, (24R)‐4α‐methyl‐5α‐ergosta‐8(14),22‐dien‐3β‐ol (gymnodinosterol), previously thought to be a major sterol only within the Kareniaceae genera Karenia, Karlodinium, and Takayama. Also found to be present at low levels were 4α‐methyl‐5α‐ergosta‐8,14,22‐trien‐3β‐ol, a sterol previously observed in Karenia brevis to be an intermediate in the production of gymnodinosterol, and cholesterol, a sterol common to many other dinoflagellates. The presence of gymnodinosterol in T. testudo is the first report of this sterol as the sole major sterol in a dinoflagellate outside of the Kareniaceae. The implication of this chemotaxonomic relationship to the Kareniaceae is discussed. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
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9. Exploring quorum sensing for inducing bioactives overproduction in the dinoflagellate microalga Amphidinium carterae.
- Author
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Kichouh-Aiadi, S., Gallardo-Rodríguez, J.J., López-Rosales, L., Cerón-García, M.C., García-Camacho, F., and Sánchez-Mirón, A.
- Abstract
The dinoflagellate Amphidinium carterae is a promising source of unique bioactive compounds with potential applications in diverse industries. Abiotic strategies for increasing bioactive cell quota have been preferred for cost-effectiveness, controllability, and existing knowledge. The supernatants of Heterosigma akashiwo and Pavlova sp. enhanced haemolytic activity of A. carterae by 2.3 times and improved its final biomass by 10 % when added to the growth medium. Prymnesium parvum supernatant increased the total lipid content of A. carterae by 50 %, while Pleurochrysis roscoffensis supernatant boosted its total carotenoid content by 40 %. This study demonstrated a rapid screening strategy for evaluating growth responses and highlights the potential of using allelopathic strategies to enhance bioactive metabolite production. Utilizing supernatants for the formulation of growth media fosters a circular economy by repurposing resources, minimizing waste, and promoting sustainability in the microalgal biotechnological industry. [Display omitted] • 38 microalgal supernatants were evaluated for stimulating A. carterae. • Quorum sensing allowed increasing total lipid and carotenoid content. • Evidence of amphidinols overproduction was found for many species. • Repurposing supernatants as a biostimulant enhances circularity. [ABSTRACT FROM AUTHOR]
- Published
- 2024
- Full Text
- View/download PDF
10. Response of the Ciliates Fabrea salina and Condylostoma sp. to Different Salinities and Microalgal Feeds.
- Author
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Hotos, George N. and Touloupi, Ioanna
- Subjects
DUNALIELLA ,DUNALIELLA salina ,CILIATA ,SALINITY ,FISH hatcheries ,HATCHERY fishes ,FISH as food - Abstract
In the quest of finding local strains of marine ciliates that can be easily cultured under a broad range of salinity and fed with microalgae, Fabrea salina Henneguy, 1890 and Condylostoma sp. Bory de St. Vincent, 1826 were cultured for 22 days in small volumes at a temperature of 16–18 °C and fed with flagellated microalgae. F. salina presented a clear preference for the salinity of 40 ppt and Condylostoma. sp. for 20 ppt. Rhodomonas salina Hill and Wetherbee, 1989 were the most efficient feeds, resulting in 30 ind./mL in F. salina and 73 ind./mL in Condylostoma. Dunaliella salina Teodoresco, 1905 and Nephroselmis sp. F. Stein, 1878 also resulted in considerable ciliate densities while Isochrysis galbana Parke, 1949 came last with the highest density in Condylostoma. The strain of Tetraselmis sp. F. Stein, 1878 (var. red pappas) which is transformed in immobilized palmelloid cells and the dinoflagellate Amphidinium carterae Hulburt, 1957, which is suspected of toxin production, were inappropriate for both ciliates. These ciliates can be easily cultured and can serve as useful organisms in bioassays and probably as live food in marine fish hatcheries. [ABSTRACT FROM AUTHOR]
- Published
- 2022
- Full Text
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11. Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate
- Author
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Girish Beedessee, Takaaki Kubota, Asuka Arimoto, Koki Nishitsuji, Ross F. Waller, Kanako Hisata, Shinichi Yamasaki, Noriyuki Satoh, Jun’ichi Kobayashi, and Eiichi Shoguchi
- Subjects
Polyketide synthases ,Harmful algal blooms ,Dinoflagellates ,Iso-Seq ,Duplication ,Amphidinium ,Biology (General) ,QH301-705.5 - Abstract
Abstract Background Some dinoflagellates cause harmful algal blooms, releasing toxic secondary metabolites, to the detriment of marine ecosystems and human health. Our understanding of dinoflagellate toxin biosynthesis has been hampered by their unusually large genomes. To overcome this challenge, for the first time, we sequenced the genome, microRNAs, and mRNA isoforms of a basal dinoflagellate, Amphidinium gibbosum, and employed an integrated omics approach to understand its secondary metabolite biosynthesis. Results We assembled the ~ 6.4-Gb A. gibbosum genome, and by probing decoded dinoflagellate genomes and transcriptomes, we identified the non-ribosomal peptide synthetase adenylation domain as essential for generation of specialized metabolites. Upon starving the cells of phosphate and nitrogen, we observed pronounced shifts in metabolite biosynthesis, suggestive of post-transcriptional regulation by microRNAs. Using Iso-Seq and RNA-seq data, we found that alternative splicing and polycistronic expression generate different transcripts for secondary metabolism. Conclusions Our genomic findings suggest intricate integration of various metabolic enzymes that function iteratively to synthesize metabolites, providing mechanistic insights into how dinoflagellates synthesize secondary metabolites, depending upon nutrient availability. This study provides insights into toxin production associated with dinoflagellate blooms. The genome of this basal dinoflagellate provides important clues about dinoflagellate evolution and overcomes the large genome size, which has been a challenge previously.
- Published
- 2020
- Full Text
- View/download PDF
12. Phytoplankton communities in marine intertidal rock-pools: Effect of location, geometric shapes and allelopathy.
- Author
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Paul, P, Patil, J S, and Anil, A C
- Abstract
Biologically rich rock-pools (RPs) are prominent component of rocky intertidal habitat and this study elucidates the factors affecting the phytoplankton distribution from high-tide (HT), mid-tide (MT) and low-tide (LT) RPs (Anjuna rocky shores, Goa, India), during the summer season. Results revealed that the RP location determines the nature of phytoplankton assemblage. MT-RPs and LT-RPs supported rich microalgal diversity (species number/morphological shapes) than HT-RPs. However, the cell abundance was higher in latter than former RPs. In frequently flushed MT-RPs and LT-RPs, pennate diatoms (Pseudonitzschia, Nitzschia, Thalasionema, Navicula, and Licmophora) representing elongated shapes dominated, whereas in stagnant HT-RPs spherical/combined shaped dinoflagellates (Amphidinium carterae sensu stricto and Bysmatrum gregarium) dominated. Interestingly, even though the taxonomic assemblages changed temporally the shape dominance remained consistent suggesting shape as a robust morphological trait. Additionally, the study also revealed the existence of species-specific allelopathy on other microalgae by Amphidinium (potential harmful algae) indicating a type of adaptive strategy, in addition to eurytolerant capabilities, for its predominance in HT-RPs, which experiences varying environmental (light, temperature, and salinity) conditions. Research Highlights: Investigated factors influencing distribution of phytoplankton (species and shape-wise) in intertidal rock pools (RPs) of Anjuna rocky shores, Goa. Location of RPs determined nature of phytoplankton community, i.e., less diversity and high abundance in high-tide RPs than mid/low-tide RPs. Spherical-shaped dinoflagellates and elongated shape diatoms dominated phytoplankton community of high and mid/low tide RPs, respectively. Even though the species composition changed temporally the shape dominance remained consistent suggesting the latter as a robust morphological trait. Dominant dinoflagellate, Amphidinium caterae sensu stricto, also showed species-specific allelopathy on other phytoplankton. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
13. Benthic dinoflagellates in Korean waters.
- Author
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An Suk Lim and Hae Jin Jeong
- Subjects
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DINOFLAGELLATES , *GYMNODINIUM , *TEMPERATE climate , *WATER currents , *TERRITORIAL waters , *GLOBAL warming , *PHYTOTOXINS - Abstract
The occurrence of benthic dinoflagellates, many of which are known to be toxic, is a critical concern for scientists, government officers, and people in the aquaculture, dining, and tourism industries. The interest in these dinoflagellates in countries with temperate climate is increasing because tropical or subtropical species introduced into temperate waters by currents are able to survive the winter season in the new environment owing to global warming. Recently, several species from the benthic dinoflagellate genera Amphidinium, Coolia, Ostreopsis, Gambierdiscus, and Prorocentrum have been reported in the waters of the South and East Sea of Korea. The advent of the benthic dinoflagellates in Korean waters is especially important because raw or slightly cooked seaweeds, which may harbor these benthic dinoflagellates, as well as raw fish, which can be potentially intoxicated by phytotoxins produced by some of these benthic dinoflagellates, are part of the daily Korean diet. The recent increase in temperature of Korean coastal waters has allowed for the expansion of benthic dinoflagellate species into these regions. In the present study, we reviewed the species, distribution, and toxicity of the benthic dinoflagellates that have been reported in Korean waters. We also provided an insight into the ecological and socio-economic importance of the occurrence of benthic dinoflagellates in Korean waters. [ABSTRACT FROM AUTHOR]
- Published
- 2021
- Full Text
- View/download PDF
14. Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate.
- Author
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Beedessee, Girish, Kubota, Takaaki, Arimoto, Asuka, Nishitsuji, Koki, Waller, Ross F., Hisata, Kanako, Yamasaki, Shinichi, Satoh, Noriyuki, Kobayashi, Jun'ichi, and Shoguchi, Eiichi
- Subjects
GYMNODINIUM ,METABOLITES ,MARINE ecosystem health ,DINOFLAGELLATE blooms ,GENOME size ,ALGAL blooms ,MARINE toxins - Abstract
Background: Some dinoflagellates cause harmful algal blooms, releasing toxic secondary metabolites, to the detriment of marine ecosystems and human health. Our understanding of dinoflagellate toxin biosynthesis has been hampered by their unusually large genomes. To overcome this challenge, for the first time, we sequenced the genome, microRNAs, and mRNA isoforms of a basal dinoflagellate, Amphidinium gibbosum, and employed an integrated omics approach to understand its secondary metabolite biosynthesis. Results: We assembled the ~ 6.4-Gb A. gibbosum genome, and by probing decoded dinoflagellate genomes and transcriptomes, we identified the non-ribosomal peptide synthetase adenylation domain as essential for generation of specialized metabolites. Upon starving the cells of phosphate and nitrogen, we observed pronounced shifts in metabolite biosynthesis, suggestive of post-transcriptional regulation by microRNAs. Using Iso-Seq and RNA-seq data, we found that alternative splicing and polycistronic expression generate different transcripts for secondary metabolism. Conclusions: Our genomic findings suggest intricate integration of various metabolic enzymes that function iteratively to synthesize metabolites, providing mechanistic insights into how dinoflagellates synthesize secondary metabolites, depending upon nutrient availability. This study provides insights into toxin production associated with dinoflagellate blooms. The genome of this basal dinoflagellate provides important clues about dinoflagellate evolution and overcomes the large genome size, which has been a challenge previously. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
15. Acclimation of the microalga Amphidinium carterae to different nitrogen sources: potential application in the treatment of marine aquaculture effluents.
- Author
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Molina-Miras, A., López-Rosales, L., Cerón-García, M. C., Sánchez-Mirón, A., Olivera-Gálvez, A., García-Camacho, F., and Molina-Grima, E.
- Abstract
There is growing interest in finding microalgae species that efficiently convert dissolved nutrients contained in aquaculture effluents into highly valuable biomass. The different nitrogen forms that are present in aquaculture effluents are particularly concerning. This study demonstrated that the dinoflagellate Amphidinium carterae can acclimate to both combined and sole nitrogen sources such as nitrate, ammonium, and urea over a wide concentration range. As far as is known, it is the first time that a species of the genus Amphidinium has been successfully cultured with urea as the sole source of nitrogen. In the presence of 882 μM of nitrate, A. carterae tolerated urea concentrations up to 5000 μM. With respect to ammonium-N tolerance, it has been observed that it is lethal at concentrations higher than 441 μM. A robust laboratory experimental design was critical for accurately assessing this acclimation. Alternative N sources did not affect the production of high-value specific polyketide secondary metabolites from A. carterae, such as amphidinols, with an average concentration of 0.435 ± 0.038% biomass d.w. An analysis of the symbiotic microbial assemblages developed in a long-term A. carterae culture in an open raceway pond, and the fact that it is able to metabolize all three nitrogen sources simultaneously, supports the idea that this microalga has the potential to be successfully cultured with aquaculture effluents. [ABSTRACT FROM AUTHOR]
- Published
- 2020
- Full Text
- View/download PDF
16. The Effect of Various Salinities and Light Intensities on the Growth Performance of Five Locally Isolated Microalgae [Amphidinium carterae, Nephroselmis sp., Tetraselmis sp. (var. red pappas), Asteromonas gracilis and Dunaliella sp.] in Laboratory Batch Cultures
- Author
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George N. Hotos and Despoina Avramidou
- Subjects
salinity ,light ,growth ,microalgae ,Amphidinium ,Nephroselmis ,Naval architecture. Shipbuilding. Marine engineering ,VM1-989 ,Oceanography ,GC1-1581 - Abstract
After a 1.5-year screening survey in the lagoons of Western Greece in order to isolate and culture sturdy species of microalgae for aquaculture or other value-added uses, as dictated primarily by satisfactory potential for their mass culture, five species emerged, and their growth was monitored in laboratory conditions. Amphidinium carterae, Nephroselmis sp., Tetraselmis sp. (var. red pappas), Asteromonas gracilis, and Dunaliella sp. were batch cultured using low (20 ppt), sea (40 ppt), and high salinity (50 or 60 or 100 ppt) and in combination with low (2000 lux) and high (8000 lux) intensity illumination. The results exhibited that all these species can be grown adequately in all salinities and with the best growth in terms of maximum cell density, specific growth rate (SGR), and biomass yield (g dry weight/L) at high illumination (8000 lux). The five species examined exhibited different responses in the salinities used, whereby Amphidinium clearly performs best in 20 ppt, far better than 40 ppt, and even more so than 50 ppt. Nephroselmis and Tetraselmis grow almost the same in 20 and 40 ppt and less well in 60 ppt. Asteromonas performs best in 100 ppt, although it can grow quite well in both 40 and 60 ppt. Dunaliella grows equally well in all salinities (20, 40, 60 ppt). Concerning the productivity, assessed as the maximum biomass yield at the end of the culture period, the first rank is occupied by Nephroselmis with ~3.0 g d.w./L, followed by Tetraselmis (2.0 g/L), Dunaliella (1.58 g/L), Amphidinium (1.19 g/L), and Asteromonas (0.7 g/L) with all values recorded at high light (8000 lux).
- Published
- 2021
- Full Text
- View/download PDF
17. Genetic transformation of the dinoflagellate chloroplast
- Author
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Isabel C Nimmo, Adrian C Barbrook, Imen Lassadi, Jit Ern Chen, Katrin Geisler, Alison G Smith, Manuel Aranda, Saul Purton, Ross F Waller, R Ellen R Nisbet, and Christopher J Howe
- Subjects
dinoflagellate ,Amphidinium ,chloroplast ,transformation ,zooxanthella ,coral reef ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Coral reefs are some of the most important and ecologically diverse marine environments. At the base of the reef ecosystem are dinoflagellate algae, which live symbiotically within coral cells. Efforts to understand the relationship between alga and coral have been greatly hampered by the lack of an appropriate dinoflagellate genetic transformation technology. By making use of the plasmid-like fragmented chloroplast genome, we have introduced novel genetic material into the dinoflagellate chloroplast genome. We have shown that the introduced genes are expressed and confer the expected phenotypes. Genetically modified cultures have been grown for 1 year with subculturing, maintaining the introduced genes and phenotypes. This indicates that cells continue to divide after transformation and that the transformation is stable. This is the first report of stable chloroplast transformation in dinoflagellate algae.
- Published
- 2019
- Full Text
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18. Assessment of multi-step processes for an integral use of the biomass of the marine microalga Amphidinium carterae.
- Author
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López-Rodríguez, M., Cerón-García, M.C., López-Rosales, L., González-López, C.V., Molina-Miras, A., Ramírez-González, A., Sánchez-Mirón, A., García-Camacho, F., and Molina-Grima, E.
- Subjects
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MARINE biomass , *UNSATURATED fatty acids , *MARINE toxins , *METABOLITES , *FATTY acids , *CAROTENOIDS - Abstract
Highlights • Multi-step extraction processes for carotenoids, fatty acids and APDs were assessed. • Each step was optimized for dinoflagellates using previously reported methodologies. • Total recoveries were 97% for carotenoids, 80% for fatty acids and 100% for APDs. Abstract Sustainable dinoflagellate microalgae-based bioprocess designed to produce secondary metabolites (SMs) with interesting bioactivities are attracting increasing attention. However, dinoflagellates also produce other valuable bioproducts (e.g polyunsaturated fatty acids, carotenoids, etc.) that could be recovered and should therefore be taken into account in the bioprocess. In this study, biomass of the marine dinoflagellate microalga Amphidinium carterae was used to assess and optimise three different methods in order to obtain three families of high-value biochemical compounds present in the biomass. The existing processes encompassed a multi-step extraction process for carotenoids, fatty acids and APDs individually and are optimized for the integral valorization of raw A. carterae biomass, with SMs being the primary target compounds. Total process recovery yields were 97% for carotenoids, 80% for total fatty acids and 100% for an extract rich in APDs (not purified). [ABSTRACT FROM AUTHOR]
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- 2019
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19. Morphology and molecular phylogeny of Bindiferia gen. nov. (Dinophyceae), a new marine, sand-dwelling dinoflagellate genus formerly classified within Amphidinium
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Shauna A. Murray, Gwenael Bilien, Nadine Borchhardt, Frédéric Zentz, Mona Hoppenrath, Nicolas Chomérat, and Lesley Rhodes
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0106 biological sciences ,SSU rDNA ,Zoology ,Morphology (biology) ,Plant Science ,Aquatic Science ,01 natural sciences ,Athecate ,03 medical and health sciences ,Genus ,parasitic diseases ,14. Life underwater ,Benthic ,Taxonomy ,030304 developmental biology ,0303 health sciences ,biology ,Amphidinium ,010604 marine biology & hydrobiology ,Dinoflagellate ,bacterial infections and mycoses ,biology.organism_classification ,Marine Biology & Hydrobiology ,Stigma ,Amphidinium boggayum ,LSU rDNA ,05 Environmental Sciences, 06 Biological Sciences ,Molecular phylogenetics ,Eye-spot ,Dinophyceae - Abstract
As historically described, the genus Amphidinum has long been recognized to be polyphyletic. Amphidinium sensu lato is the most diverse of all marine benthic dinoflagellate genera and after the redefinition of the sensu stricto genus about 100 species remained of unknown generic affiliation. A species similar to the Australian sensu lato species Amphidinium boggayum was discovered in France. Morphological and molecular phylogenetic data supported the description of a new species and the classification of the two closely related species within a new athecate, photosynthetic, benthic genus, named Bindiferia. Cells were dorsoventrally flattened with smaller asymmetric epicone. The cingulum was descending. The sulcus reached the antapex and had an extension onto the epicone. The apical structure complex formed an anticlockwise loop around the apex. A red stigma was located in the anterior part of the epicone, near the apex. Vegetative division occurred in a non-motile stage within a hyaline sheath. Non-motile cells had dorsal hypocone grooves. The two species differed from each other in epicone size, cingulum displacement, nucleus location and surface groove occurrence. The molecular phylogenetic results showed that Bindiferia is a distinct taxon that is only distantly related to Amphidinium sensu stricto. The nearest sister group to Bindiferia could not be reliably determined, but the apical structure complex suggested a close relationship to the genera of the Gymnodinium sensu stricto clade.
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- 2021
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20. Diversity, biogeography, and chemically mediated interactions of toxigenic benthic marine dinoflagellates from Mexican coastal waters
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Durán-Riveroll, Lorena M., Cembella, Allan D., and Okolodkov, Yuri B.
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Amphidinium ,Coolia ,Prorocentrum ,phylogeny ,in vitro cytotoxicity - Abstract
Many benthic dinoflagellates produce polyketide-derived polyether toxins responsible for diverse seafood poisoning syndromes, such as diarrhetic shellfish poisoning and ciguatera fish poisoning. In Mexico, bHAB events have received recent public health and scientific attention, but many species lack molecular identification, and phylogeographic and toxigenic information remains limited. Our multidisciplinary project on bHAB taxa includes morphological and molecular characterization, phylogeography, and investigation of allelopathic and pharmacological bioactivity, supplemented with bacterial microbiome analysis. We first characterized the phylogeography and diversity of the genus Prorocentrum from Mexican coasts and investigated potential allelochemical effects of associated bacteria on growth and toxigenicity of members of the Prorocentrum lima species complex. Thus far, we have also completed the first phylogenetic study of benthic Amphidinium and registered two species (A. theodorei and A. massartii) for the first time from Mexico. Preliminary studies on the in vitro cytotoxic properties of A. operculatum and Coolia malayensis are also well advanced, demonstrating pharmacological potential through bioactivity against human cancer cell lines. The focus on functional diversity and species interactions yields valuable insights in evaluating toxin risk in the design and implementation of monitoring systems for bHABs and exploring biotechnological prospects for bioactive secondary metabolites from benthic species.
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- 2022
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21. Toxicity Bioassay and Cytotoxic Effects of the Benthic Marine Dinoflagellate Amphidinium operculatum
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Lorena M. Durán-Riveroll, Allan Cembella, and Ana Luisa Mejía-Camacho
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0106 biological sciences ,amphidinolide ,Brine shrimp ,RM1-950 ,Toxicology ,01 natural sciences ,03 medical and health sciences ,chemistry.chemical_compound ,polyketide toxins ,RA1190-1270 ,Bioassay ,14. Life underwater ,hemolytic activity ,Cytotoxicity ,anti-cancer ,030304 developmental biology ,Pharmacology ,0303 health sciences ,Growth medium ,biology ,Amphidinium ,Chemistry ,010604 marine biology & hydrobiology ,Dinoflagellate ,biology.organism_classification ,Pollution ,Biochemistry ,13. Climate action ,Toxicology. Poisons ,cytotoxicity ,Chemical defense ,Therapeutics. Pharmacology ,Artemia salina - Abstract
Benthic dinoflagellates produce a wide array of bioactive compounds, primarily polyketides, that cause toxic effects on human consumers of seafood and perhaps mediate species interactions in the benthic microenvironment. This study assesses toxic and other bioactive effects of the benthic dinoflagellate Amphidinium operculatum (strain AA60) in two targeted bioassays. The brine shrimp (Artemia salina) bioassay revealed lethal effects of direct exposure to live dinoflagellate cells (Treatment A) and even higher potency with ethanolic extracts of lysed cells (Treatment D). There were no inimical bioactive effects of components released to the aqueous growth medium (Treatment B) or from aqueous cell lysates (Treatment C). The hypothesis that released bioactive compounds provide a chemical defense against metazoan grazers is therefore not supported by these results. The cytotoxic effect of ethanolic crude extracts of this dinoflagellate exhibited mild to high growth reduction effects on six human cancer cell lines. In particular, crude cell-free extracts proved highly growth-inhibitory activity towards breast and lung cancer cell lines MCF-7 and SKLU-1, respectively. Preliminary anti-cancer results indicate that natural bioactive compounds from Amphidinium are worthy of structural characterization and further toxicological investigation as potential therapeutants.
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- 2021
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22. Molecular phylogeny and synonymy of Balechina gracilis comb. nov. (= Gymnodinium gracile ), a widespread polymorphic unarmored dinoflagellate (Dinophyceae)
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Luis Felipe Artigas, Fernando Gómez, and Rebecca J. Gast
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0106 biological sciences ,new combination ,Zoology ,Plant Science ,Aquatic Science ,DNA, Ribosomal ,010603 evolutionary biology ,01 natural sciences ,molecular phylogenetics ,taxonomy ,Sensu ,Genus ,Mediterranean Sea ,14. Life underwater ,Gymnodinium ,Phylogeny ,biology ,Amphidinium ,010604 marine biology & hydrobiology ,Dinoflagellate ,Sequence Analysis, DNA ,biology.organism_classification ,Gymnodiniales ,Dinophyta ,Molecular phylogenetics ,Dinoflagellida ,naked Dinoflagellata ,Brazil ,Dinophyceae - Abstract
Gymnodinium gracile, described from the coasts of Denmark in 1881, is one of the first described unarmored dinoflagellates. Individuals which morphologically fit with the original description were isolated from the English Channel (North‐East Atlantic). The SSU rRNA gene sequences were identical to the sequences identified as Balechina pachydermata and Gymnodinium amphora from the Mediterranean Sea and Brazil. We propose the transfer of Gymnodinium gracile into the genus Balechina as B. gracilis comb. nov. These sequences constitute an independent lineage, clustering with numerous environmental sequences from polar to tropical waters. The widespread distribution, the high plasticity in size, shape and coloration and the difficulties in discerning the fine longitudinal striae have contributed to the description of numerous synonyms: Amphidinium vasculum, Balechina pachydermata (=Gymnodinium pachydermatum), Gymnodinium achromaticum, G. abbreviatum, G. amphora, G. dogielii, G. lohmannii (=G. roseum sensu Lohmann 1908), G. situla and Gyrodinium cuneatum (=G. gracile sensu Pouchet 1885).
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- 2021
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23. Response of the Ciliates Fabrea salina and Condylostoma sp. to Different Salinities and Microalgal Feeds
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George N. Hotos and Ioanna Touloupi
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Fabrea salina ,Condylostoma ,growth ,salinity ,Tetraselmis ,Dunaliella ,Isochrysis ,Rhodomonas ,Nephroselmis ,Amphidinium - Abstract
In the quest of finding local strains of marine ciliates that can be easily cultured under a broad range of salinity and fed with microalgae, Fabrea salina Henneguy, 1890 and Condylostoma sp. Bory de St. Vincent, 1826 were cultured for 22 days in small volumes at a temperature of 16–18 °C and fed with flagellated microalgae. F. salina presented a clear preference for the salinity of 40 ppt and Condylostoma. sp. for 20 ppt. Rhodomonas salina Hill and Wetherbee, 1989 were the most efficient feeds, resulting in 30 ind./mL in F. salina and 73 ind./mL in Condylostoma. Dunaliella salina Teodoresco, 1905 and Nephroselmis sp. F. Stein, 1878 also resulted in considerable ciliate densities while Isochrysis galbana Parke, 1949 came last with the highest density in Condylostoma. The strain of Tetraselmis sp. F. Stein, 1878 (var. red pappas) which is transformed in immobilized palmelloid cells and the dinoflagellate Amphidinium carterae Hulburt, 1957, which is suspected of toxin production, were inappropriate for both ciliates. These ciliates can be easily cultured and can serve as useful organisms in bioassays and probably as live food in marine fish hatcheries.
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- 2022
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24. Iriomoteolides-9a and 11a: two new odd-numbered macrolides from the marine dinoflagellate Amphidinium species.
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Kumagai, Keiko, Tsuda, Masayuki, Fukushi, Eri, Kawabata, Jun, Masuda, Atsunori, and Tsuda, Masashi
- Abstract
Iriomoteolides-9a ( 1) and 11a ( 2), new 15- and 19-membered macrolides, respectively, have been isolated from the marine dinoflagellate Amphidinium species (strain KCA09052). Compounds 1 and 2 were obtained from the extracts of the algal cells inoculated in the PES and TKF seawater medium, respectively. The structures of 1 and 2 were assigned on the basis of detailed NMR analyses. Compounds 1 and 2 exhibited cytotoxic activity against human cervix adenocarcinoma HeLa cells. [ABSTRACT FROM AUTHOR]
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- 2017
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25. Testudodinium magnum sp. nov. (Dinophyceae), a novel marine sand-dwelling dinoflagellate from subtropical Japan.
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Pinto, Sohail Keegan, Terada, Ryuta, and Horiguchi, Takeo
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- *
DINOFLAGELLATES , *MOLECULAR phylogeny , *RECOMBINANT DNA , *SEQUENCE analysis , *EPISOMES - Abstract
A new marine benthic dinoflagellate, Testudodinium magnum sp. nov., was described from a sand sample collected on the seafloor at a depth of 35 m off Mageshima Island, Kagoshima, Japan. The dinoflagellate possessed the characteristic features of the genus Testudodinium, but was distinguished by its extremely large size and pebbled dorsal surface of the hyposome, caused by the presence of numerous nodules. The cells of this dinoflagellate possessed a dominant sessile and a rare motile form that were morphologically distinct from each other: The sessile form was larger and the small rounded episome with longitudinal furrow was completely embedded in the hyposome; the motile form was smaller and the episome was only partly embedded in the hyposome. The ultrastructural investigations revealed the presence of a large, circular, starch-sheathed pyrenoid whose matrix was traversed by randomly arranged thylakoid lamellae. The chloroplasts formed a network radiating outward from the pyrenoid. Uniquely, this dinoflagellate possessed internal props - structures that spanned the thickness of the cell and were fibrous in nature. The props were numerous and passed through organelles and cell contents. Phylogenetic analyses based on the small-subunit ribosomal DNA gene sequences placed this dinoflagellate firmly within the Testudodinium clade with high support. On the basis of the morphological features and phylogenetic analyses, we concluded that this dinoflagellate was a new species in the genus Testudodinium. [ABSTRACT FROM AUTHOR]
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- 2017
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26. A Water-Soluble 5/14-Carbobicyclic Steroid with a trans-9,11-Epoxy Ring from the Marine Dinoflagellate Amphidinium gibbosum: Insights into Late-Stage Diversification of Steroids
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Shi-Hao Sun, Jun Wu, Li Shen, Wan-Shan Li, and Yi Yu
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South china ,biology ,010405 organic chemistry ,Stereochemistry ,Amphidinium ,Chemistry ,medicine.medical_treatment ,Organic Chemistry ,Dinoflagellate ,Late stage ,010402 general chemistry ,Ring (chemistry) ,biology.organism_classification ,01 natural sciences ,Biochemistry ,0104 chemical sciences ,Steroid ,Water soluble ,medicine ,Physical and Theoretical Chemistry ,Oxidative cleavage - Abstract
Gibbosterol A (1), a water-soluble 14-membered carbocyclic steroid with a twisted trans-9,11-epoxy ring, was discovered from the South China Sea dinoflagellate, Amphidinium gibbosum, together with its acid-induced cyclization product 2. It exhibits marked agonistic effects against human pregnane-X-receptor in a dose-dependent manner within the concentration range of 100 nM to 10 μM. Its 5/14-carbobicyclic nucleus is proposed to be originated from late-stage oxidative cleavage of the C5-C10 and C8-C9 bonds of β-sitosterol.
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- 2021
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27. Gibbosolide A, a highly functionalized 20-membered macrolide with a terminal cis-fused 2-methylhexahydro-2H-furo[3,2-b]pyran motif: insights into late-stage cyclization of marine macrolides
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Li Shen, Jun Wu, Yi Yu, Shi-Hao Sun, Zhong-Ping Jiang, and Ren-Jie Yan
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chemistry.chemical_classification ,Ozonolysis ,Trifluoromethyl ,Double bond ,biology ,Stereochemistry ,Amphidinium ,Organic Chemistry ,Late stage ,Absolute configuration ,biology.organism_classification ,Stereocenter ,chemistry.chemical_compound ,chemistry ,Pyran - Abstract
A sailboat-shaped 20-membered macrolide, named gibbosolide A, featuring a rare cis-fused 2-methylhexahydro-2H-furo[3,2-b]pyran motif, was obtained from the South China Sea dinoflagellate, Amphidinium gibbosum. Its planar structure and absolute configuration, containing twelve carbon stereocenters, were unambiguously established by extensive NMR investigations, J-based configuration analysis, NOE interactions, ozonolysis of the carbon–carbon double bonds, and the modified Mosher's α-methoxy-α-(trifluoromethyl)phenylacetyl (MTPA) ester method. It displays activation effects on human farnesoid–X–receptor within the concentration range of 200.0 nM to 2.0 μM. Its late-stage cyclization mechanisms are proposed. Most notably, ozonolysis of the carbon–carbon double bonds combined with the modified Mosher's ester method is a useful approach for the unambiguous determination of absolute configurations of hydroxy-bearing carbon stereocenters within the complex macrolide core.
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- 2021
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28. Structure and Stereochemistry of Amphidinolide N Congeners from Marine Dinoflagellate Amphidinium Species
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Mai Akakabe, Masashi Tsuda, Yuko Konishi, Eri Fukushi, Akira Tominaga, Mika Minamida, Masayuki Tsuda, Keiko Kumagai, and Jun Kawabata
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biology ,010405 organic chemistry ,Amphidinium ,Stereochemistry ,Chemistry ,Dinoflagellate ,General Chemistry ,General Medicine ,010402 general chemistry ,biology.organism_classification ,01 natural sciences ,Nmr data ,0104 chemical sciences ,Congener ,Drug Discovery ,Amphidinolide N - Abstract
Two highly potent cytotoxic 26-membered macrolides, isocaribenolide-I (1) and a chlorohydrin 2, together with known amphidinolide N (3), have been isolated from a free-swimming dinoflagellate Amphidinium species (KCA09053 and KCA09056 strains) collected off Iriomote Island, Japan. The structures of 1 and 2 were determined to be a congener of 3 with an isobutyl terminus and the chlorohydrin form of 3, respectively, by detailed analyses of spectroscopic data. The relative stereochemistries of 1 and 2 were elucidated by the conformational analyses based on NMR data.
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- 2021
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29. Molecular insights into symbiosis—mapping sterols in a marine flatworm-algae-system using high spatial resolution MALDI-2-MS imaging with ion mobility separation
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Tanja Bien, Elizabeth A. Hambleton, Jens Soltwisch, and Klaus Dreisewerd
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Ion-mobility spectrometry ,Photosynthesis ,01 natural sciences ,Biochemistry ,Mass spectrometry imaging ,Analytical Chemistry ,03 medical and health sciences ,Symbiosis ,Algae ,Trapped ion mobility ,Ion Mobility Spectrometry ,Animals ,MALDI ,030304 developmental biology ,0303 health sciences ,biology ,Amphidinium ,Chemistry ,010401 analytical chemistry ,Dinoflagellate ,biology.organism_classification ,Waminoa acoel flatworm ,Sterol ,0104 chemical sciences ,Sterols ,MALDI-2 ,Platyhelminths ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Dinoflagellida ,Research Paper - Abstract
Waminoa sp. acoel flatworms hosting Symbiodiniaceae and the related Amphidinium dinoflagellate algae are an interesting model system for symbiosis in marine environments. While the host provides a microhabitat and safety, the algae power the system by photosynthesis and supply the worm with nutrients. Among these nutrients are sterols, including cholesterol and numerous phytosterols. While it is widely accepted that these compounds are produced by the symbiotic dinoflagellates, their transfer to and fate within the sterol-auxotrophic Waminoa worm host as well as their role in its metabolism are unknown. Here we used matrix-assisted laser desorption ionization (MALDI) mass spectrometry imaging combined with laser-induced post-ionization and trapped ion mobility spectrometry (MALDI-2-TIMS-MSI) to map the spatial distribution of over 30 different sterol species in sections of the symbiotic system. The use of laser post-ionization crucially increased ion yields and allowed the recording of images with a pixel size of 5 μm. Trapped ion mobility spectrometry (TIMS) helped with the tentative assignment of over 30 sterol species. Correlation with anatomical features of the worm, revealed by host-derived phospholipid signals, and the location of the dinoflagellates, revealed by chlorophyll a signal, disclosed peculiar differences in the distribution of different sterol species (e.g. of cholesterol versus stigmasterol) within the receiving host. These findings point to sterol species-specific roles in the metabolism of Waminoa beyond a mere source of energy. They also underline the value of the MALDI-2-TIMS-MSI method to future research in the spatially resolved analysis of sterols.
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- 2020
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30. Iriomoteolides-14a and 14b, New Cytotoxic 15-Membered Macrolides from Marine Dinoflagellate Amphidinium Species
- Author
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Masayuki Tsuda, Takeyuki Suzuki, Masashi Tsuda, and Ryui Makihara
- Subjects
biology ,Strain (chemistry) ,Amphidinium ,Stereochemistry ,Chemistry ,Dinoflagellate ,General Chemistry ,General Medicine ,biology.organism_classification ,Cervix Adenocarcinoma ,HeLa ,Drug Discovery ,Chemical conversion ,Cytotoxic T cell - Abstract
Two new macrolides, iriomoteolides-14a (1) and 14b (2) have been isolated from the marine dinoflagellate Amphidinium species (strain KCA09057). Compounds 1 and 2 are 15-membered macrolides, which are structural analogs of amphidinolides O (3) and P (4). The structures of 1 and 2 were assigned on the basis of detailed NMR analyses and chemical conversion studies. Compounds 1 and 2 showed moderate cytotoxic activity against human cervix adenocarcinoma HeLa cells.
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- 2020
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31. Simple Method for Preparing Delicate Dinoflagellate of the Genus Amphidinium for Scanning Electron Microscopy
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Hugo I. Pérez-López, Lorena M. Durán-Riveroll, M. Berenit Mendoza-Garfias, and Laura E. Gómez-Lizarraga
- Subjects
Crystallography ,biology ,Chemistry ,Amphidinium ,Scanning electron microscope ,Simple (abstract algebra) ,Genus (mathematics) ,Dinoflagellate ,biology.organism_classification ,Instrumentation - Published
- 2020
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32. The Effect of Various Salinities and Light Intensities on the Growth Performance of Five Locally Isolated Microalgae [Amphidinium carterae, Nephroselmis sp., Tetraselmis sp. (var. red pappas), Asteromonas gracilis and Dunaliella sp.] in Laboratory Batch Cultures
- Author
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George Hotos
- Subjects
biology ,Amphidinium ,ved/biology ,Chemistry ,Nephroselmis ,Amphidinium carterae ,ved/biology.organism_classification_rank.species ,Botany ,Dunaliella ,Dunaliella sp ,Asteromonas gracilis ,Tetraselmis ,biology.organism_classification - Abstract
After a 1.5 year screening survey in the lagoons of Western Greece in order to isolate and culture sturdy species of microalgae for aquaculture or other value added uses, as dictated primarily by a satisfactory potential for their mass-culture, five species emerged and their growth was monitored in laboratory conditions. Amphidinium carterae, Nephroselmis sp., Tetraselmis sp. (var. red pappas), Asteromonas gracilis and Dunaliella sp. were batch cultured using low (20 ppt), sea (40 ppt) and high salinity (50 or 60 or 100 ppt) and in combination with a low (2000 lux) and high (8000 lux) intensity of illumination. The results exhibited that all these species can be grown adequately in all salinities and with best growth in terms of maximum cell density, specific growth rate (SGR) and biomass yield (g dry weight/L) at high illumination (8000 lux). The five species examined exhibited different responses in the salinities used, Amphidinium clearly does best in 20 ppt far better than 40 ppt and even more than 50 ppt. Nephroselmis and Tetraselmis grow almost the same in 20 and 40 ppt and less well in 60 ppt. Asteromonas does best in 100 ppt although it can grow quite well in both 40 and 60 ppt. Dunaliella grows equally well in all salinities (20-40-60 ppt). Concerning productivity as maximum biomass yield at the end of the culture period, first rank is occupied by Nephroselmis with ~3.0 g d.w./L, followed by Tetraselmis (2.0 g/L), Dunaliella (1.58 g/L), Amphidinium (1.19 g/L) and Asteromonas (0.7 g/L) with all values recorded at high light (8000 lux).
- Published
- 2021
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33. Detection of the Benthic Dinoflagellates, Ostreopsis cf. ovata and Amphidinium massartii (Dinophyceae), Using Loop-Mediated Isothermal Amplification
- Author
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Jun-Ho Hyung, Jinik Hwang, Jae Yeon Park, and Eun Sun Lee
- Subjects
Detection limit ,In situ ,Chromatography ,biology ,Amphidinium ,Chemistry ,Naval architecture. Shipbuilding. Marine engineering ,Loop-mediated isothermal amplification ,Dinoflagellate ,VM1-989 ,Ocean Engineering ,GC1-1581 ,biology.organism_classification ,Oceanography ,molecular detection ,monitoring ,Real-time polymerase chain reaction ,Benthic zone ,harmful algae ,Jeju coastal waters ,Water Science and Technology ,Civil and Structural Engineering ,Dinophyceae - Abstract
For the in situ and sensitive detection of benthic dinoflagellates, we have established an integrated loop-mediated isothermal amplification (LAMP) assay based on Ostreopsis cf. ovata and Amphidinium massartii. To detect the two species, a set of species-specific primers was constructed between the ITS gene and D1–D6 LSU gene, and the reaction temperature, time, and buffer composition were optimized to establish this method. In addition, the specificity of the LAMP primers was verified both in strains established in the laboratory and in field samples collected from the Jeju coastal waters, Korea. With the LAMP assay, the analysing time was within 45 to 60 min, which may be shorter than that with the conventional PCR. The detection sensitivity of the LAMP assay for O. cf. ovata or A. massartii was comparable to other molecular assays (PCR and quantitative PCR (qPCR)) and microscopy examination. The detection limit of LAMP was 0.1 cell of O. cf. ovata and 1 cell of A. massartii. The optimized LAMP assay was successfully applied to detect O. cf. ovata and A. massartii in field samples. Thus, this study provides an effective method for detecting target benthic dinoflagellate species, and could be further implemented to monitor phytoplankton in field surveys as an altenative.
- Published
- 2021
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34. Seasonality of the dinoflagellate Amphidinium cf. carterae (Dinophyceae: Amphidiniales) in Bahía de la Paz, Gulf of California
- Author
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Yuri B. Okolodkov, Jesús Antonio Díaz-Ortiz, Rogelio González-Armas, Gerardo Verdugo-Díaz, Ismael Gárate-Lizárraga, and Beatriz Pérez-Cruz
- Subjects
0106 biological sciences ,Zoology ,010501 environmental sciences ,Aquatic Science ,Biology ,Oceanography ,01 natural sciences ,Zooplankton ,California ,Phytoplankton ,0105 earth and related environmental sciences ,Diatoms ,Amphidinium ,010604 marine biology & hydrobiology ,fungi ,Temperature ,Dinoflagellate ,Eutrophication ,Plankton ,biology.organism_classification ,Pollution ,Benthic zone ,Dinoflagellida ,Seasons ,Bloom ,Brazil ,Dinophyceae - Abstract
Monthly phytoplankton samples were collected from January 2013 to December 2015 at a fixed sampling site in Bahia de La Paz, Gulf of California. During this study 26 samplings were Amphidinium cf. carterae positive. The highest densities of A. cf. carterae (754.2 × 103 to 1022.4 × 103 cells L−1) were recorded during a bloom detected in January 2015 when water temperatures were 20–22 °C. This dinoflagellate showed a well-marked seasonal variation, being found mainly from November to April. Blooms of the species were linked to the upwelled water due to the northwesterly wind. Cysts surrounded by a mucilaginous membrane of A. cf. carterae were found. We also observed these hyaline cysts inside zooplankton fecal pellets. Other benthic/tychoplanktonic dinoflagellates and diatoms, including some potentially toxic species were also found. The occurrence of blooms of A. cf. carterae in Bahia de La Paz could represent a risk for aquaculture activities and human health.
- Published
- 2019
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35. Morphology, growth, toxin production, and toxicity of cultured marine benthic dinoflagellates from Brazil and Cuba
- Author
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Thiago Alves Pereira, Angel R. Moreira-González, Hajime Uchida, Luiz L. Mafra, Toshiyuki Suzuki, Nicolas Chomérat, Gwenael Bilien, Aya Uesugi, and Luciano F. Fernandes
- Subjects
0106 biological sciences ,biology ,Amphidinium ,Toxin ,010604 marine biology & hydrobiology ,Zoology ,Brine shrimp ,Plant Science ,Okadaic acid ,Aquatic Science ,biology.organism_classification ,medicine.disease_cause ,01 natural sciences ,chemistry.chemical_compound ,chemistry ,Benthic zone ,Phytoplankton ,medicine ,Bioassay ,Artemia salina ,010606 plant biology & botany - Abstract
The present study investigated selected benthic dinoflagellates isolated from different regions from the Western Atlantic, with respect to their morphology, growth, toxicity, and toxin production in culture. A total of nine strains of benthic dinoflagellates belonging to three genera were cultivated: Amphidinium massartii, Amphidinium operculatum (2 strains), Coolia malayensis (2 strains), Prorocentrum hoffmannianum (2 strains), and Prorocentrum mexicanum, whose morphological and genetic characterizations matched previous descriptions, and Prorocentrum sp., morphologically related to P. cf. norrissianum. The two strains of C. malayensis from Brazil attained the highest growth rates (0.42–0.47 day−1), but the lowest cell densities (2.2–2.9 × 104 cells mL−1) in culture. The highest cell densities were recorded for A. massartii from Cuba (3.8 × 105 cells mL−1). All species/strains investigated exhibited moderate toxicity to larvae of the brine shrimp Artemia salina; A. massartii being the most toxic species and Prorocentrum sp. the least one. Additionally, extracts of Prorocentrum species (P. hoffmannianum and Prorocentrum sp.) tested positive in mouse bioassays following intraperitoneal injection. Moderate to high concentrations of okadaic acid (OA), but no dinophysistoxins (DTXs), were found in both P. hoffmannianum strains from Cuba; but no diarrheic toxins were detected in either P. mexicanum from Cuba or Prorocentrum sp. from southern Brazil. Finally, five novel amphidinols were detected in cultures of both A. massartii (Cuba) and A. operculatum (Brazil) by LC-MS/MS, with molecular weights of 1440.8 (two isomers), 1360.8, 1287.7, and 984.6. These findings clearly indicate the need to include benthic species among the harmful microalgae surveyed in regional monitoring programs of phytoplankton.
- Published
- 2019
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36. The Missing Piece in Biosynthesis of Amphidinols: First Evidence of Glycolate as a Starter Unit in New Polyketides from Amphidinium carterae
- Author
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Adele Cutignano, Genoveffa Nuzzo, Angela Sardo, and Angelo Fontana
- Subjects
amphidinol ,amphidinol-related polyketide ,Amphidinium ,dinoflagellate, glycolate ,polyketide biosynthesis ,PKS ,antifungal polyketide ,Candida albicans ,SHAM ,Biology (General) ,QH301-705.5 - Abstract
Two new members of the amphidinol family, amphidinol A (1) and its 7-sulfate derivative amphidinol B (2), were isolated from a strain of Amphidinium carterae of Lake Fusaro, near Naples (Italy), and chemically identified by spectroscopic and spectrometric methods. Amphidinol A showed antifungal activity against Candida albicans (MIC = 19 µg/mL). Biosynthetic experiments with stable isotope-labelled acetate allowed defining the elongation process in 1. For the first time the use of glycolate as a starter unit in the polyketide biosynthesis of amphidinol metabolites was unambiguously demonstrated.
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- 2017
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37. Amphirionin-2, a novel linear polyketide with potent cytotoxic activity from a marine dinoflagellate Amphidinium species.
- Author
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Kumagai, Keiko, Minamida, Mika, Akakabe, Mai, Tsuda, Masayuki, Konishi, Yuko, Tominaga, Akira, Tsuda, Masashi, Fukushi, Eri, and Kawabata, Jun
- Subjects
- *
POLYKETIDES , *ANTINEOPLASTIC agents , *DINOFLAGELLATES , *FURANS , *MOIETIES (Chemistry) , *ADENOCARCINOMA , *CANCER treatment , *PHARMACEUTICAL chemistry - Abstract
A novel linear polyketide, amphirionin-2 ( 1 ), with two unique hexahydrofuro[3,2- b ]furan moieties has been isolated from the cultivated algal cells of a benthic dinoflagellate Amphidinium sp. (strain KCA09051). The structure was elucidated on the basis of detailed analyses of 2D NMR data, and the absolute configuration of C-5 was determined by using modified Mosher’s method. Amphirionin-2 ( 1 ) exhibited potent cytotoxic activity against human colon carcinoma Caco-2 cells and human lung adenocarcinoma A549 cells. [ABSTRACT FROM AUTHOR]
- Published
- 2015
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- View/download PDF
38. Phylogeny of Five Species of Nusuttodinium gen. nov. (Dinophyceae), a Genus of Unarmoured Kleptoplastidic Dinoflagellates.
- Author
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Takano, Yoshihito, Yamaguchi, Haruyo, Inouye, Isao, Moestrup, Øjvind, and Horiguchi, Takeo
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DINOFLAGELLATES ,MOLECULAR phylogeny ,RECOMBINANT DNA ,GYMNODINIUM ,CYTOLOGY - Abstract
Cells of five unarmoured kleptoplastidic dinoflagellates, Amphidinium latum , Amphidinium poecilochroum , Gymnodinium amphidinioides, Gymnodinium acidotum and Gymnodinium aeruginosum were observed under light and/or scanning electron microscopy and subjected to single-cell PCR. The SSU rDNA and the partial LSU rDNA of all the examined species were sequenced, and the SSU rDNA of G. myriopyrenoides was sequenced. Phylogenetic analyses revealed that the unarmoured kleptoplastidic species formed a monophyletic clade within the Gymnodinium -clade sensu Daugbjerg et al. (2000) . The sister taxa for this clade were Gymnodinium palustre and Spiniferodinium galeiforme , both of which possess brown-coloured chloroplasts. The results indicated that acquisition of kleptoplastidy in these unarmoured dinoflagellates was a single event and that these unarmoured kleptoplastidic dinoflagellates may have evolved from a form with permanent chloroplasts. Molecular trees suggested that the acquisition of kleptoplastidy took place in a marine habitat and later some species colonized the freshwater habitat. Because these unarmoured kleptoplastidic dinoflagellates are monophyletic and characterized by distinct morphological and cytological features (including the presence of the same type of apical groove, absence of nuclear chambers in the nuclear envelope, absence of genuine chloroplasts, and the possession of kleptochloroplasts), we propose the establishment of a new genus, Nusuttodinium , to accommodate all these dinoflagellates. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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39. Integrated omics unveil the secondary metabolic landscape of a basal dinoflagellate
- Author
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Koki Nishitsuji, Shinichi Yamasaki, Noriyuki Satoh, Takaaki Kubota, Eiichi Shoguchi, Kanako Hisata, Girish Beedessee, Ross F. Waller, Asuka Arimoto, Jun'ichi Kobayashi, Beedessee, Girish [0000-0003-4397-7471], and Apollo - University of Cambridge Repository
- Subjects
Physiology ,Duplication ,Metabolite ,Iso-Seq ,Secondary Metabolism ,Plant Science ,Computational biology ,Genome ,General Biochemistry, Genetics and Molecular Biology ,chemistry.chemical_compound ,Amphidinium ,Structural Biology ,Harmful algal blooms ,RNA Isoforms ,Secondary metabolism ,lcsh:QH301-705.5 ,Genome size ,Ecology, Evolution, Behavior and Systematics ,biology ,Alternative splicing ,Dinoflagellate ,Cell Biology ,Polyketide synthases ,biology.organism_classification ,RNA, Algal ,Dinoflagellates ,MicroRNAs ,lcsh:Biology (General) ,chemistry ,Dinoflagellida ,General Agricultural and Biological Sciences ,Genome, Protozoan ,Function (biology) ,RNA, Protozoan ,Developmental Biology ,Biotechnology ,Research Article - Abstract
Background Some dinoflagellates cause harmful algal blooms, releasing toxic secondary metabolites, to the detriment of marine ecosystems and human health. Our understanding of dinoflagellate toxin biosynthesis has been hampered by their unusually large genomes. To overcome this challenge, for the first time, we sequenced the genome, microRNAs, and mRNA isoforms of a basal dinoflagellate, Amphidinium gibbosum, and employed an integrated omics approach to understand its secondary metabolite biosynthesis. Results We assembled the ~ 6.4-Gb A. gibbosum genome, and by probing decoded dinoflagellate genomes and transcriptomes, we identified the non-ribosomal peptide synthetase adenylation domain as essential for generation of specialized metabolites. Upon starving the cells of phosphate and nitrogen, we observed pronounced shifts in metabolite biosynthesis, suggestive of post-transcriptional regulation by microRNAs. Using Iso-Seq and RNA-seq data, we found that alternative splicing and polycistronic expression generate different transcripts for secondary metabolism. Conclusions Our genomic findings suggest intricate integration of various metabolic enzymes that function iteratively to synthesize metabolites, providing mechanistic insights into how dinoflagellates synthesize secondary metabolites, depending upon nutrient availability. This study provides insights into toxin production associated with dinoflagellate blooms. The genome of this basal dinoflagellate provides important clues about dinoflagellate evolution and overcomes the large genome size, which has been a challenge previously.
- Published
- 2020
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- View/download PDF
40. Calibration Curves of Culture Density Assessed by Spectrophotometer for Three Microalgae (Nephroselmis sp., Amphidinium carterae and Phormidium sp.)
- Author
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George N. Hotos, Despoina Avramidou, and Vlassula Bekiari
- Subjects
medicine.diagnostic_test ,Absorption spectroscopy ,biology ,ved/biology ,Calibration curve ,Chemistry ,Amphidinium ,ved/biology.organism_classification_rank.species ,Analytical chemistry ,biology.organism_classification ,Phormidium sp ,Absorbance ,Nephroselmis ,Amphidinium carterae ,Spectrophotometry ,medicine - Abstract
This study concerns the finding of an effective operational equation relating the measured absorpbance (or O.D. - optical density) in a spectrophotometer of the suspended cells of microalgae to their cell density (c.d.) in culture in order to construct calibration curves for use in culture operations. The microalgae examined were the chlorophyte Nephroselmis sp., the dinophyte Amphidinium carterae and the filamentous cyanobacterium Phormidium sp. Wavelengths of 430 and 680 nm were selected that correspond to chlorophyll-a peaks of their absorption spectra were used and additionally 750 and 570 nm where absorbance was not peaked. From all equations extracted best fitness with strong predictive values were those of a logarithmic type: O.D.=0,9328*ln(c.d.)-14,108 (R2=0,9943) at 680 nm for Nephroselmis, a power equation: O.D.=0,0000009*(c.d.)0,9195 (R2=0,9936) at 680 nm for Amphidinium and a polynomial second order: O.D.=0,9869(c.d.)2+2,4393(c.d.)+0,2666 (R2=0,9737) at 570 nm for Phormidium.
- Published
- 2020
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- View/download PDF
41. Spatial and Seasonal Variations of Harmful Benthic Dinoflagellates in the Coastal Waters of Mauritius
- Author
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G. Dhunnoo, M. Fakoo, P. Neermul, N. Jeenally, K. Elaheebocus, V. Emrith, and R. Bhantooa
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Ciguatera ,biology ,Benthic zone ,Abundance (ecology) ,Amphidinium ,Ecology ,medicine ,Fish kill ,Ostreopsis sp ,medicine.disease ,biology.organism_classification ,Algal bloom ,Bay - Abstract
Harmful algal bloom (HAB) events can have severe consequences such as mass fish kills and problems to public health. The Albion Fisheries Research Centre has an ongoing HAB monitoring programme at established coastal sites in Mauritius including Grand Baie, Albion, Le Morne and Blue Bay. The commonly observed benthic dinoflagellates are from the genera Amphidinium sp., Coolia sp., Gambierdiscus sp., Ostreopsis sp., Prorocentrum sp. and Synophysis sp. These are the causative agents of fish toxicity such as ciguatera. The monitoring data at the four monitoring sites for the period 2013–2017 were analysed to evaluate the temporal, spatial and seasonal variations in the densities of harmful marine microalgae species. Recurrent high densities were recorded at all the sites during the years. The genera Prorocentrum and Ostreopsis were observed at relatively higher densities throughout the years at the four study sites whilst the other genera occurred only occasionally. An increase in the mean cell densities of Ostreopsis sp. and Prorocentrum sp. were observed from 2013 to 2016 followed by a decline in the abundance in 2017 at most of the study sites. The cell densities of these two genera were found to be higher during summer seasons, and their occurrences were more significant at two sites, namely Blue Bay and Le Morne which are located in the South Coast of the Island. This warrants further studies to determine the influence of oceanographic parameters, seawater quality and environmental conditions on the cell densities of harmful marine microalgae in Mauritius.
- Published
- 2020
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42. Amphirionin-5, a novel linear polyketide from a cultured marine dinoflagellate Amphidinium species with a potent cell proliferation-promoting activity.
- Author
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Akakabe, Mai, Kumagai, Keiko, Tsuda, Masayuki, Konishi, Yuko, Tominaga, Akira, Tsuda, Masashi, Fukushi, Eri, and Kawabata, Jun
- Subjects
- *
POLYKETIDES , *DINOFLAGELLATES , *CELL proliferation , *ALGAL cells , *MESENCHYMAL stem cells - Abstract
Abstract: A novel linear polyketide, amphirionin-5 (1), has been isolated from the cultivated algal cells of the benthic dinoflagellate Amphidinium sp. (strain KCA09053), and the structure was elucidated on the basis of detailed analyses of 1D and 2D NMR data. Amphirionin-5 (1) resulted in a 282% increase in the proliferation of murine bone-marrow derived stromal ST-2 cells and 320% increase in the proliferation of murine osteoblastic MC3T3-E1 cells. [Copyright &y& Elsevier]
- Published
- 2014
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43. A Polyol-Polyol Super-Carbon-Chain Compound Containing Thirty-Six Carbon Stereocenters from the Dinoflagellate Amphidinium gibbosum: Absolute Configuration and Multi-Segment Modification
- Author
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Yi Yu, Zeng Luo, Yan-Lan Zhu, Jun Wu, Li Shen, and Wan-Shan Li
- Subjects
marine dinoflagellate ,super-carbon-chain compound ,Stereochemistry ,Polymers ,Pharmaceutical Science ,chemistry.chemical_element ,010402 general chemistry ,01 natural sciences ,Article ,Stereocenter ,multi-segment modification ,Polyol ,Drug Discovery ,Amphidinium gibbosum ,lcsh:QH301-705.5 ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,chemistry.chemical_classification ,Carbon chain ,biology ,Molecular Structure ,010405 organic chemistry ,Amphidinium ,Dinoflagellate ,Absolute configuration ,biology.organism_classification ,0104 chemical sciences ,NMR spectra database ,absolute configuration ,lcsh:Biology (General) ,chemistry ,Dinoflagellida ,Carbon - Abstract
A super-carbon-chain compound, named gibbosol C, featuring a polyoxygenated C70-linear-carbon-chain backbone encompassing two acyclic polyol chains, was obtained from the South China Sea dinoflagellate Amphidinium gibbosum. Its planar structure was elucidated by extensive NMR investigations, whereas its absolute configurations, featuring the presence of 36 carbon stereocenters and 30 hydroxy groups, were successfully established by comparison of NMR data of the ozonolyzed products with those of gibbosol A, combined with J-based configuration analysis, Kishi&rsquo, s universal NMR database, and the modified Mosher&rsquo, s MTPA ester method. Multi-segment modification was revealed as the smart biosynthetic strategy for the dinoflagellate to create remarkable super-carbon-chain compounds with structural diversity.
- Published
- 2020
44. Iriomoteolide-13a, a cytotoxic 22-membered macrolide from a marine dinoflagellate Amphidinium species.
- Author
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Akakabe, Mai, Kumagai, Keiko, Tsuda, Masayuki, Konishi, Yuko, Tominaga, Akira, Tsuda, Masashi, Fukushi, Eri, and Kawabata, Jun
- Subjects
- *
MACROLIDE antibiotics , *DINOFLAGELLATES , *MARINE species diversity , *NUCLEAR magnetic resonance spectroscopy , *HELA cells , *ANTINEOPLASTIC agents , *TETRAHYDROFURAN , *CERVICAL cancer treatment - Abstract
Abstract: Iriomoteolide-13a (1) has been isolated from a benthic dinoflagellate Amphidinium sp. (strain KCA09053) as a new 22-membered macrolide containing one hexahydrofuro[3,2-b]furan ring, one tetrahydropyran ring, two tetrahydrofuran rings, three one-carbon branches, and three hydroxyl groups including two hemiketals. The structure of 1 was assigned on the basis of a detailed 2D NMR analysis. Compound 1 exhibited cytotoxic activity against human cervix adenocarcinoma HeLa cells (IC50: 0.5 μg/mL). [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
45. Epiphytic dinoflagellates in sub-tropical New Zealand, in particular the genus Coolia Meunier.
- Author
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Rhodes, Lesley, Smith, Kirsty, Papiol, Gemma Gimenez, Adamson, Janet, Harwood, Tim, and Munday, Rex
- Subjects
- *
EPIPHYTES , *DINOFLAGELLATES , *RECOMBINANT DNA , *NUCLEOTIDE sequence - Abstract
Highlights: [•] Coolia malayensis is a common dinoflagellate species in New Zealand's sub-tropical northern waters. [•] New Zealand C. malayensis isolates reported as C. monotis are reclassified based on analysis of LSU rDNA sequence data. [•] The dinoflagellates Amphidinium thermaeum and Gambierdiscus cf. yasumotoi are new reports for Northland, New Zealand. [Copyright &y& Elsevier]
- Published
- 2014
- Full Text
- View/download PDF
46. LC-MS/MS Method Development for the Discovery and Identification of Amphidinols Produced by Amphidinium
- Author
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Lorena M. Durán-Riveroll, Bernd Krock, Francisco García-Camacho, Urban Tillmann, Marvin Wellkamp, and Jan Tebben
- Subjects
0106 biological sciences ,glycosylation ,Pharmaceutical Science ,medicine.disease_cause ,Mass spectrometry ,dinoflagellate ,01 natural sciences ,Article ,Tandem Mass Spectrometry ,Drug Discovery ,Lc ms ms ,medicine ,harmful algae ,Ichthyotoxin ,phycotoxin ,Pharmacology, Toxicology and Pharmaceutics (miscellaneous) ,lcsh:QH301-705.5 ,Phycotoxin ,Chromatography ,biology ,010405 organic chemistry ,Amphidinium ,Toxin ,Chemistry ,010604 marine biology & hydrobiology ,biology.organism_classification ,Method development ,0104 chemical sciences ,lcsh:Biology (General) ,Polyketides ,ichthyotoxin ,Dinoflagellida ,Chromatography, Liquid - Abstract
Amphidinols are polyketides produced by dinoflagellates suspected of causing fish kills. Here, we demonstrate a liquid chromatography-tandem mass spectrometry (LC-MS/MS) method for the identification and quantification of amphidinols (AM). Novel AM were detected by neutral loss (NL) scan and then quantified together with known AM by selection reaction monitoring (SRM). With the new method, AM were detected in four of eight analyzed strains with a maximum of 3680 fg toxin content per cell. In total, sixteen novel AM were detected by NL scan and characterized via their fragmentation patterns. Of these, two substances are glycosylated forms. This is the first detection of glycosylated AM.
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- 2020
47. The diversity of inorganic carbon acquisition mechanisms in eukaryotic microalgae
- Author
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Jeffrey S. Dason, I. Emma Huertas, Brian Colman, and Shabana Bhatti
- Subjects
inorganic chemicals ,Ecophysiology ,biology ,Amphidinium ,RuBisCO ,Plant Science ,biology.organism_classification ,Isochrysis galbana ,Haptophyte ,Diatom ,Total inorganic carbon ,Botany ,biology.protein ,Eustigmatophyte ,Agronomy and Crop Science - Abstract
Eukaryotic microalgae have developed CO2concentrating mechanisms to maximise the concentration of CO2 at the active site of Rubisco in response to the low CO2 concentrations in the external aquatic medium. In these organisms, the modes of inorganic carbon (Ci) uptake are diverse, ranging from diffusive CO2 uptake to the active transport of HCO3 -and CO2 and many have an external carbonic anhydrase to facilitate HCO3- use. There is unequivocal evidence for the mechanisms of Ci uptake in only about 25 species of microalgae of the chlorophyte, haptophyte, rhodophyte, diatom, and eustigmatophyte groups. Most of these species take up both CO2 and HCO3-, but the rates of uptake of each of these substrates varies with the algal species. A few species take up only one of the two forms of Ci, an adaptation that is not necessarily correlated with their ecological distribution. Evidence is presented for the active uptake of HCO3- and CO2 in two marine haptophytes,Isochrysis galbana Parke and Dicrateria inornata Parke, and for active transport of CO2 but lack of HCO3- uptake in two marine dinoflagellates, Amphidinium carteraeHulburt and Heterocapsa oceanica Stein.
- Published
- 2020
48. Distribution of potentially toxic epiphytic dinoflagellates in Saint Martin Island (Caribbean Sea, Lesser Antilles)
- Author
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Pierre-Yves Pascal, Rodolphe Lemée, Nicolas Chomérat, and Aurélie Boisnoir
- Subjects
0106 biological sciences ,biology ,Amphidinium ,Ecology ,010604 marine biology & hydrobiology ,Fresh weight ,Biodiversity ,Plant Science ,Gambierdiscus ,Aquatic Science ,biology.organism_classification ,010603 evolutionary biology ,01 natural sciences ,Macrophyte ,Abundance (ecology) ,Epiphyte ,Ecology, Evolution, Behavior and Systematics ,Taxonomy - Abstract
For the first time, distribution of epiphytic dinoflagellates was studied in Saint Martin Island (Lesser Antilles) during the cyclonic season (between September 1st and 3rd, 2015). The present study provides a semi-quantitative analysis because the fresh weight of each macrophyte was estimated around 10 g. The identified genera were: Ostreopsis J.Schmidt, Prorocentrum Ehrenberg, Coolia Meunier, Amphidinium Claperede & Lachmann, and Gambierdiscus Adachi & Fukuyo in order of decreasing abundance. Highest average abundance values of the genera Ostreopsis and Amphidinium were hosted by macrophytes of the Phaeophyceae class with c. 15 000 and 60 cells g–1 respectively. Epiphytic Coolia cells were mainly observed on seagrasses with the highest average abundance value of c. 1000 cells g–1 whereas the genera Gambierdiscus and Prorocentrum were most often associated with Florideophyceae with the highest average abundances of c. 70 and 1500 cells g–1 respectively. This preliminary study indicates the most relevant locations to survey the biodiversity of potentially toxic epiphytic dinoflagellates in Saint Martin Island.
- Published
- 2020
49. The role of 44-methylgambierone in ciguatera fish poisoning: Acute toxicity, production by marine microalgae and its potential as a biomarker for Gambierdiscus spp
- Author
-
J. Sam Murray, Meng Yan, Michaela E. Larsson, D. Tim Harwood, Alistair L. Wilkins, Lesley Rhodes, Tomohiro Nishimura, Michèle R. Prinsep, Jonathan Puddick, Martina A. Doblin, Priscilla T.Y. Leung, Frode Rise, and Sarah C. Finch
- Subjects
0106 biological sciences ,Ciguatoxin ,Zoology ,Plant Science ,010501 environmental sciences ,Aquatic Science ,Secondary metabolite ,01 natural sciences ,Mice ,medicine ,Microalgae ,Animals ,Ciguatera fish poisoning ,0105 earth and related environmental sciences ,biology ,Amphidinium ,010604 marine biology & hydrobiology ,Ciguatera Poisoning ,biology.organism_classification ,Acute toxicity ,Biomarker ,Benthic zone ,Dinoflagellida ,Epiphyte ,Biomarkers ,medicine.drug ,Chromatography, Liquid - Abstract
Ciguatera fish poisoning (CFP) is prevalent around the tropical and sub-tropical latitudes of the world and impacts many Pacific island communities intrinsically linked to the reef system for sustenance and trade. While the genus Gambierdiscus has been linked with CFP, it is commonly found on tropical reef systems in microalgal assemblages with other genera of toxin-producing, epiphytic and/or benthic dinoflagellates – Amphidinium, Coolia, Fukuyoa, Ostreopsis and Prorocentrum. Identifying a biomarker compound that can be used for the early detection of Gambierdiscus blooms, specifically in a mixed microalgal community, is paramount in enabling the development of management and mitigation strategies. Following on from the recent structural elucidation of 44-methylgambierone, its potential to contribute to CFP intoxication events and applicability as a biomarker compound for Gambierdiscus spp. was investigated. The acute toxicity of this secondary metabolite was determined by intraperitoneal injection using mice, which showed it to be of low toxicity, with an LD50 between 20 and 38 mg kg−1. The production of 44-methylgambierone by 252 marine microalgal isolates consisting of 90 species from 32 genera across seven classes, was assessed by liquid chromatography-tandem mass spectrometry. It was discovered that the production of this secondary metabolite was ubiquitous to the eight Gambierdiscus species tested, however not all isolates of G. carpenteri, and some species/isolates of Coolia and Fukuyoa.
- Published
- 2020
50. Effects of substratum and depth on benthic harmful dinoflagellate assemblages
- Author
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Zhen Fei Lim, Po Teen Lim, Patricia A. Tester, Li Keat Lee, Chui Pin Leaw, R. Wayne Litaker, Haifeng Gu, and Leo Lai Chan
- Subjects
0106 biological sciences ,Coral ,Ecosystem ecology ,lcsh:Medicine ,010501 environmental sciences ,01 natural sciences ,Article ,Algae ,Abundance (ecology) ,Canonical correspondence analysis ,lcsh:Science ,0105 earth and related environmental sciences ,Marine biology ,Multidisciplinary ,biology ,Ecology ,Amphidinium ,010604 marine biology & hydrobiology ,lcsh:R ,Dinoflagellate ,biology.organism_classification ,Substrate (marine biology) ,Environmental sciences ,Ocean sciences ,Benthic zone ,lcsh:Q - Abstract
Microhabitats influence the distribution and abundance of benthic harmful dinoflagellate (BHAB) species. Currently, much of the information on the relationships between BHABs and microhabitat preferences is based on non-quantitative anecdotal observations, many of which are contradictory. The goal of this study was to better quantify BHAB and microhabitat relationships using a statistically rigorous approach. Between April 2016 to May 2017, a total of 243 artificial substrate samplers were deployed at five locations in the Perhentian Islands, Malaysia while simultaneous photo-quadrat surveys were performed to characterize the benthic substrates present at each sampling site. The screen samplers were retrieved 24 h later and the abundances of five BHAB genera, Gambierdiscus, Ostreopsis, Coolia, Amphidinium, and Prorocentrum were determined. Substrate data were then analyzed using a Bray–Curtis dissimilarity matrix to statistically identify distinct microhabitat types. Although BHABs were associated with a variety of biotic and abiotic substrates, the results of this study demonstrated differing degrees of microhabitat preference. Analysis of the survey results using canonical correspondence analysis explained 70.5% (horizontal first axis) and 21.6% (vertical second axis) of the constrained variation in the distribution of various genera among microhabitat types. Prorocentrum and Coolia appear to have the greatest range being broadly distributed among a wide variety of microhabitats. Amphidinium was always found in low abundances and was widely distributed among microhabitats dominated by hard coral, turf algae, sand and silt, and fleshy algae and reached the highest abundances there. Gambierdiscus and Ostreopsis had more restricted distributions. Gambierdiscus were found preferentially associated with turf algae, hard coral and, to a lesser extent, fleshy macroalgae microhabitats. Ostreopsis, almost always more abundant than Gambierdiscus, preferred the same microhabitats as Gambierdiscus and were found in microbial mats as well. With similar habitat preferences Ostreopsis may serve as an indicator organism for the presence of Gambierdiscus. This study provides insight into how BHAB-specific microhabitat preferences can affect toxicity risks.
- Published
- 2020
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