33 results on '"Amable L"'
Search Results
2. Serine/threonine protein phosphatase 5 regulates glucose homeostasis in vivo and apoptosis signalling in mouse pancreatic islets and clonal MIN6 cells
- Author
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Grankvist, N., Amable, L., Honkanen, R. E., Sjöholm, Å., and Ortsäter, H.
- Published
- 2012
- Full Text
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3. 19 Autophagy related metals in IDH1 mutant glioma: Chloroquine and TMZ as a potential novel strategy to treat IDH1 mt gliomas
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Bautista, W, primary, Abu-Asab, M, additional, Amable, L, additional, Ross, L, additional, Riggins, G, additional, and Kozlov, S, additional
- Published
- 2018
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4. Inhibition of Gli1 results in inhibition of platinum-DNA adduct repair in A2780-CP70 human ovarian cancer cells
- Author
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Reed, E., primary, Amable, L., additional, Gavin, E., additional, Kudo, K., additional, and Shevde, L., additional
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- 2012
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5. Synthesis of Cytostatin
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Boger, D., primary, Lawhorn, B., additional, Boga, S., additional, Wolkenberg, S., additional, Colby, D., additional, Gauss, C.-M., additional, Swingle, M., additional, Amable, L., additional, and Honkanen, R., additional
- Published
- 2007
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6. DETAIL DESIGN OF A BALLAST CONTROL ROOM FOR AN UNDERWATER TIDAL ENERGY CONVERTER
- Author
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Amable López, José Andrés Somolinos, Luis Ramón Núñez, and Rodrigo Pérez
- Subjects
Naval architecture. Shipbuilding. Marine engineering ,VM1-989 - Abstract
The aim of this article is to design, precisely and fully detailed, the Control Room of a Ballast Actuation System of a marine Tidal Energy Converter. The design would respond to the detail design stage of any shipyard for its subsequent manufacture. During the following lines, the authors have analysed the Ballast Actuation System, not only from a conceptual way, but also from the detailed design point of view, so it has been considered necessary to complete it, with a study of a technological nature, in which industrial (reducing the cost and increasing reliability) solutions have been developed for measuring and driving systems. To elaborate the 3D detail design of the pump room, a topological design has been introduced for allowing a quicker evaluation of different design alternatives. All the machinery, piping, supports and auxiliary structures have been modelled in order to evaluate the quality of the conceptual and initial design. The primary structure, as well as the location of the equipment, have been carefully studied and analysed. The P&ID (Piping and Instrumentation Diagrams) and access drawings have been followed in order to model the 3D pipe routing, supports and auxiliary structure. The 3D components have been defined from its main features (element ID, supplier, description, weight and centre of gravity) and its geometry (library or geometric macro model), provided by the supplier. All this work has been carried out with the intention of not only assess different alternatives, but also to generate at any time the information for manufacturing and mounting.
- Published
- 2018
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7. Modelado Dinámico y Control de un Dispositivo Sumergido Provisto de Actuadores Hidrostáticos
- Author
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Marina Pérez de la Portilla, Amable López Piñeiro, José Andrés Somolinos Sánchez, and Rafael Morales Herrera
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Energías Renovables ,Sistemas Marinos ,Control Multivariable ,Sistemas variables con el tiempo ,Integración OrcaFlex-Matlab ,Control engineering systems. Automatic machinery (General) ,TJ212-225 - Abstract
Las corrientes marinas, fuente de energía renovable más predecible, localizan la mayor parte de su energía en altas profundidades. Para aprovechar esta energía se están desarrollando dispositivos flotantes, de tipo fondeado. La viabilidad económica de estos dispositivos requiere el abaratamiento de costos. El desarrollo de sistemas de control que permitan el cambio automático de orientación y profundidad del generador, con el fin de abaratar las maniobras de mantenimiento y aprovechar el recurso energético de forma óptima, resulta imprescindible. En este trabajo se presenta un actuador hidrostático y se realiza un modelo dinámico simple para control, de un dispositivo de dos grados de libertad, con un sistema de control de lastre. A partir de este modelo se ha desarrollado una ley de control multivariable, basada en una matriz de desacoplamiento no lineal y en la compensación de los términos de fricción y compresibilidad. Finalmente, la bondad del controlador ha sido validada mediante simulación.
- Published
- 2017
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8. Modelado Energético de Convertidores Primarios para el Aprovechamiento de las Energías Renovables Marinas
- Author
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Amable López, José Andrés Somolinos, and Luis Ramón Núñez
- Subjects
Control engineering systems. Automatic machinery (General) ,TJ212-225 - Abstract
Resumen: El objetivo principal de este artículo es presentar los métodos más habituales de aprovechamiento de distintos tipos de energías renovables procedentes del mar y analizar los modelos energéticos de los dispositivos utilizados para su explotación. Estos modelos son necesarios para el diseño del dispositivo así como para el estudio de su comportamiento dinámico. Su conocimiento resulta imprescindible también para su simulación dinámica y para el diseño de los algoritmos de control necesarios para conseguir una optimización energética y económica. En este trabajo se presentan algunos de los diferentes tipos de energías del mar, y se j ustifica el interés en el desarrollo de dispositivos específicos para el aprovechamiento de las corrientes marinas y de las olas, junto con una pequeña clasificación en función de la profundidad del agua en la zona de instalación de estos dispositivos. Para los convertidores de energía de las olas, generalmente, de tipo resonante, se presenta una metodología de tipo general, analizando los distintos campos de fuerzas actuantes y los métodos de obtención de las respuestas temporal y frecuencial. Para los dispositivos de aprovechamiento de las corrientes, se propone una metodología simplificada de modelado dinámico que puede ser utilizada en análisis del dispositivo concreto. Para ello se tiene en cuenta los perfiles hidrodinámicos que utilizan estos dispositivos, los datos del perfil de la corriente con la profundidad y del modelo de oleaje, y la dinámica propia del conjunto multiplicadora y generador eléctrico. La metodología propuesta se aplica al estudio de un caso concreto, correspondiente a un rotor de eje horizontal de un convertidor de energía de las corrientes. Los resultados obtenidos permiten analizar los efectos del oleaje y de las condiciones de flujo de la corriente no uniforme sobre las magnitudes energéticas más importantes. Abstract: The main objective of this paper is to present the most common harnessing methods for different types of renewable energy from the sea, and to analyze energy models of the devices used for their exploitation. These models are required for the design of the device as well as for the studying of their dynamic behavior. The knowledge of these models is also necessary for dynamic simulation and for the design of control algorithms in order to achieve energy and economic optimizations. In this paper, some of the different types of ocean energy are presented and the interest in the development of specific devices for the exploitation of sea currents and waves is justified. A small classification based on the depth of water in the area where these devices are to be installed is presented too. For wave energy converters, which are generally resonant type, a general methodology is presented. The different fields of acting forces and methods for obtaining the time and frequency responses are analyzed. For devices for the exploitation of energy from sea currents, it is presented a simplified methodology of dynamic modeling that can be used in analysis of the particular device. It is taken into account the hydrodynamic profiles used in these devices, the data flow profile with depth and wave model together with the gearbox-generator set dynamics. The proposed methodology is applied to a specific case study, corresponding to a horizontal axis rotor from a device for harnessing of tidal energy. The obtained results allow to analyze the effects of wave and flow conditions of non uniform current over the most important energy variables. Palabras clave: energías renovables marinas, modelado y simulación, teoría del elemento de pala, modelado del recurso, absorbedor puntual, Keywords: marine renewable energies, modelling and simulation, blade element theory, resource modelling, point absorber
- Published
- 2014
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9. A New Self-Calibrated Procedure for Impact Detection and Location on Flat Surfaces
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Carlos Morón, Rafael Morales, Amable López, and José A. Somolinos
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impact detection and location ,acoustic wave propagation ,robotic based experimental setup ,Chemical technology ,TP1-1185 - Abstract
Many analyses of acoustic signals processing have been proposed for different applications over the last few years. When considering a bar-based structure, if the material through which the sound waves propagate is considered to be acoustically homogeneous and the sound speed is well known, then it is possible to determine the position and time of impact by a simple observation of the arrival times of the signals of all the transducers that are strategically disposed on the structure. This paper presents a generalized method for impact detection and location on a flat plate, together with a calibration procedure with which to obtain the sound speed from only one set of measurements. This propagation speed is not well known as a result of either imprecise material properties or the overlapping of longitudinal and transversal waves with different propagation velocities. The use of only three piezoelectric sensors allows the position and time of impact on the flat plate to be obtained when the sound speed is well known, while the use of additional sensors permits a larger detection area to be covered, helps to estimate the sound speed and/or avoids the wrong timing of difference measurements. Experimental results are presented using a robot with a specially designed knocking tool that produces impacts on a metallic flat plate.
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- 2013
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10. Homogenization in chemical reactive flows
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Carlos Conca, Jesus Ildefonso Diaz, Amable Linan, and Claudia Timofte
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Homogenization ,reactive flows ,variational inequality ,monotone graph. ,Mathematics ,QA1-939 - Abstract
This paper concerns the homogenization of two nonlinear models for chemical reactive flows through the exterior of a domain containing periodically distributed reactive solid grains (or reactive obstacles). In the first model, the chemical reactions take place on the walls of the grains, while in the second one the fluid penetrates the grains and the reactions take place therein. The effective behavior of these reactive flows is described by a new elliptic boundary-value problem containing an extra zero-order term which captures the effect of the chemical reactions.
- Published
- 2004
11. Force Sensor of a Climbing Robot Derived from Its Own Flexible Structure
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José Andrés Somolinos, Amable López, Rafael Morales, and Carlos Morón
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Electronics ,TK7800-8360 ,Electronic computers. Computer science ,QA75.5-76.95 - Abstract
One of the most important design constraints of a climbing robot is its own weight. When links or legs are used as a locomotion system they tend to be composed of special lightweight materials, or four-bars-linkage mechanisms are designed to reduce the weight with small rigidity looses. In these cases, flexibility appears and undesirable effects, such as dynamics vibrations, must be avoided at least when the robot moves at low speeds. The knowledge of the real tip position requires the computation of its compliance or stiffness matrix and the external forces applied to the structure. Gravitational forces can be estimated, but external tip forces need to be measured. This paper proposes a strain gauge system which achieves the following tasks: (i) measurement of the external tip forces, and (ii) estimation of the real tip position (including flexibility effects). The main advantages of the proposed system are: (a) the use of external force sensors is avoided, and (b) a substantial reduction of the robot weight is achieved in comparison with other external force measurement systems. The proposed method is applied to a real symmetric climbing robot and experimental results are presented.
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- 2013
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12. Synthesis of Cytostatin.
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Lawhorn, B.G., Boga, S.B., Wolkenberg, S.E., Colby, D.A., Gauss, C.-M., Swingle, M.R., Amable, L., Honkanen, R.E., and Boger, D.L.
- Published
- 2007
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13. Intrinsic factors and CD1d1 but not CD1d2 expression levels control invariant natural killer T cell subset differentiation.
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Amable L, Ferreira Martins LA, Pierre R, Do Cruseiro M, Chabab G, Sergé A, Kergaravat C, Delord M, Viret C, Jaubert J, Liu C, Karray S, Marie JC, Irla M, Georgiev H, Clave E, Toubert A, Lucas B, Klibi J, and Benlagha K
- Subjects
- Animals, Mice, Cell Differentiation, Killer Cells, Natural, Mice, Inbred C57BL, Receptors, Antigen, T-Cell metabolism, T-Lymphocyte Subsets, Antigens, CD1 metabolism, Antigens, CD1d metabolism, Natural Killer T-Cells
- Abstract
Invariant natural killer T (NKT) cell subsets are defined based on their cytokine-production profiles and transcription factors. Their distribution is different in C57BL/6 (B6) and BALB/c mice, with a bias for NKT1 and NKT2/NKT17 subsets, respectively. Here, we show that the non-classical class I-like major histocompatibility complex CD1 molecules CD1d2, expressed in BALB/c and not in B6 mice, could not account for this difference. We find however that NKT cell subset distribution is intrinsic to bone marrow derived NKT cells, regardless of syngeneic CD1d-ligand recognition, and that multiple intrinsic factors are likely involved. Finally, we find that CD1d expression levels in combination with T cell antigen receptor signal strength could also influence NKT cell distribution and function. Overall, this study indicates that CD1d-mediated TCR signals and other intrinsic signals integrate to influence strain-specific NKT cell differentiation programs and subset distributions., (© 2023. The Author(s).)
- Published
- 2023
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14. Genomic landscape of MDS/CMML associated with systemic inflammatory and autoimmune disease.
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Zhao LP, Boy M, Azoulay C, Clappier E, Sébert M, Amable L, Klibi J, Benlagha K, Espéli M, Balabanian K, Preudhomme C, Marceau-Renaut A, Benajiba L, Itzykson R, Mekinian A, Fain O, Toubert A, Fenaux P, Dulphy N, and Adès L
- Subjects
- Autoimmune Diseases complications, Autoimmune Diseases genetics, Humans, Inflammation complications, Inflammation genetics, Leukemia, Myelomonocytic, Chronic complications, Leukemia, Myelomonocytic, Chronic genetics, Myelodysplastic Syndromes complications, Myelodysplastic Syndromes genetics, Prognosis, Retrospective Studies, Autoimmune Diseases pathology, Biomarkers, Tumor genetics, Genomics methods, Inflammation pathology, Leukemia, Myelomonocytic, Chronic pathology, Mutation, Myelodysplastic Syndromes pathology
- Published
- 2021
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15. A focus on NKT cell subset characterization and developmental stages.
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Klibi J, Amable L, and Benlagha K
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- 2020
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16. A focus on natural killer T-cell subset characterization and developmental stages.
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Klibi J, Amable L, and Benlagha K
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- GATA3 Transcription Factor, Humans, Lymphocyte Activation, Nuclear Receptor Subfamily 1, Group F, Member 3, Promyelocytic Leukemia Zinc Finger Protein, T-Box Domain Proteins, T-Lymphocyte Subsets immunology, Cell Differentiation, Natural Killer T-Cells immunology
- Abstract
Almost 20 years ago, CD1d tetramers were developed to track invariant natural killer T (NKT) cells based on their specificity, and to define developmental steps during which differentiation markers and functional features are progressively acquired from early NKT cell precursor to fully mature NKT cell subsets. Based on these findings, a linear developmental model was proposed and subsequently used by all studies investigating the specific role of factors that control NKT cell development. More recently, based on intracellular staining patterns of lineage-specific transcription factors such as T-bet, GATA-3, promyelocytic leukemia zinc finger and RORγt, a lineage differentiation model was proposed for NKT cell development. Currently, studies on NKT cells development present lineage differentiation model data in addition to the linear maturation model. In the perspective presented here, we discuss current knowledge relating to NKT cell developmental models and particularly focus on the approaches and strategies, some of which appear nebulous, used to define NKT cell developmental stages and subsets., (© 2020 Australian and New Zealand Society for Immunology Inc.)
- Published
- 2020
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17. Characterization of the developmental landscape of murine RORγt+ iNKT cells.
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Klibi J, Li S, Amable L, Joseph C, Brunet S, Delord M, Parietti V, Jaubert J, Marie J, Karray S, Eberl G, Lucas B, Toubert A, and Benlagha K
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- Animals, Female, Mice, Mice, Inbred BALB C, Mice, Inbred C57BL, Mice, Knockout, Mice, Transgenic, Nuclear Receptor Subfamily 1, Group F, Member 3 deficiency, Natural Killer T-Cells immunology, Nuclear Receptor Subfamily 1, Group F, Member 3 immunology
- Abstract
Invariant natural killer T (iNKT) cells expressing the retinoic acid receptor-related orphan receptor γt (RORγt) and producing IL-17 represent a minor subset of CD1d-restricted iNKT cells (iNKT17) in C57BL/6J (B6) mice. We aimed in this study to define the reasons for their low distribution and the sequence of events accompanying their normal thymic development. We found that RORγt+ iNKT cells have higher proliferation potential and a greater propensity to apoptosis than RORγt- iNKT cells. These cells do not likely reside in the thymus indicating that thymus emigration, and higher apoptosis potential, could contribute to RORγt+ iNKT cell reduced thymic distribution. Ontogeny studies suggest that mature HSAlow RORγt+ iNKT cells might develop through developmental stages defined by a differential expression of CCR6 and CD138 during which RORγt expression and IL-17 production capabilities are progressively acquired. Finally, we found that RORγt+ iNKT cells perceive a strong TCR signal that could contribute to their entry into a specific 'Th17 like' developmental program influencing their survival and migration. Overall, our study proposes a hypothetical thymic developmental sequence for iNKT17 cells, which could be of great use to study molecular mechanisms regulating this developmental program., (© The Japanese Society for Immunology. 2019. All rights reserved. For permissions, please e-mail: journals.permissions@oup.com.)
- Published
- 2020
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18. Combining the Ugi-azide multicomponent reaction and rhodium(III)-catalyzed annulation for the synthesis of tetrazole-isoquinolone/pyridone hybrids.
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Ojeda GM, Ranjan P, Fedoseev P, Amable L, Sharma UK, Rivera DG, and Van der Eycken EV
- Abstract
An efficient sequence based on the Ugi-azide reaction and rhodium(III)-catalyzed intermolecular annulation has been established for the preparation of tetrazole-isoquinolone/pyridone hybrids. Several N -acylaminomethyltetrazoles were reacted with arylacetylenes to form the hybrid products in moderate to very good yields. The method relies on the capacity of the rhodium catalyst to promote C(sp
2 )-H activation in the presence of a suitable directing group. The Ugi-azide reaction provides broad molecular diversity and enables the introduction of the tetrazole moiety, which may further assist the catalytic reaction by coordinating the metal center. The scope of the isoquinolones is very wide and may be extended to the preparation of complex compounds having heterocyclic moieties such as pyridone, furan, thiophene and pyrrole, as well as the corresponding benzo-fused derivatives. The developed procedure is simple, reproducible and does not require inert conditions., (Copyright © 2019, Ojeda et al.; licensee Beilstein-Institut.)- Published
- 2019
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19. TCR density in early iNKT cell precursors regulates agonist selection and subset differentiation in mice.
- Author
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Joseph C, Klibi J, Amable L, Comba L, Cascioferro A, Delord M, Parietti V, Lenoir C, Latour S, Lucas B, Viret C, Toubert A, and Benlagha K
- Subjects
- Animals, Cell Differentiation immunology, Cell Lineage immunology, Mice, Mice, Transgenic, Natural Killer T-Cells immunology, Natural Killer T-Cells metabolism, Receptors, Antigen, T-Cell, alpha-beta immunology, T-Lymphocyte Subsets immunology, T-Lymphocyte Subsets metabolism, Natural Killer T-Cells cytology, Receptors, Antigen, T-Cell, alpha-beta metabolism, T-Lymphocyte Subsets cytology
- Abstract
It is established that iNKT cells are a cell type that require strong TCR signal for their proper development and represent a model for thymic agonist selection. The nature of the signal perceived by iNKT cells promoting their specification is not well understood. To address this question, we analyzed iNKT cell development in relevant TCR Vα14-Jα18 alpha chain transgenic mice (Vα14Tg). In CD4-Vα14Tg mice, where the transgene is driven by CD4 promoter, we identified a block in iNKT cell development at early developmental stages due to a reduced expression of key transcription factors accompanied with a reduced TCR expression levels. This indicates that TCR signal strength control iNKT cell differentiation. Importantly, we found in WT mice that early precursors of iNKT cells express higher TCR levels compared to positively selected precursors of mainstream T cells showing that TCR levels could contribute to the strength of iNKT cell TCR signaling. Overall, our study highlights TCR signal strength associated with a higher TCR density as an important regulator of iNKT cell lineage specification., (© 2019 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.)
- Published
- 2019
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20. Vitamin D 3 enhances the response to cisplatin in bladder cancer through VDR and TAp73 signaling crosstalk.
- Author
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Bunch BL, Ma Y, Attwood K, Amable L, Luo W, Morrison C, Guru KA, Woloszynska-Read A, Hershberger PA, Trump DL, and Johnson CS
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- Animals, Apoptosis drug effects, Cell Line, Tumor, Disease Models, Animal, Drug Synergism, Female, Gene Expression, Humans, Immunohistochemistry, Mice, Models, Biological, Prognosis, Receptors, Calcitriol genetics, Tumor Protein p73 genetics, Urinary Bladder Neoplasms etiology, Urinary Bladder Neoplasms genetics, Urinary Bladder Neoplasms mortality, Vitamin D Deficiency metabolism, Xenograft Model Antitumor Assays, Cholecalciferol pharmacology, Cisplatin pharmacology, Receptors, Calcitriol metabolism, Signal Transduction drug effects, Tumor Protein p73 metabolism, Urinary Bladder Neoplasms metabolism
- Abstract
Background: Vitamin D
3 (VitD) deficiency is linked to increased incidence and worse survival in bladder cancer (BCa). In addition to cystectomy, patients are treated with cisplatin-based chemotherapy, however 30%-50% of patients do not benefit from this treatment. The effects of VitD deficiency on response to chemotherapy remain unknown., Methods: To test effects of VitD supplementation on the response to cisplatin we analyzed patient serum VitD levels and correlated that with survival. In vivo, VitD deficient mice were treated with cisplatin, with or without pretreatment with the active VitD metabolite, 1,25 dihydroxyvitamin D3 (1,25D3 ). Lastly, using BCa cell lines, T24 and RT-112, the mechanism of action of 1,25D3 and cisplatin combination treatment was determined by apoptosis assays, as well as western blot and RT-PCR., Results: In this study, we determined that low serum 25 hydroxyvitamin D3 (25D3 ) levels was significantly associated with worse response to cisplatin. Pretreating deficient mice with 1,25D3 , reduced tumor volume compared to cisplatin monotherapy. In vitro, 1,25D3 pretreatment increased the apoptotic response to cisplatin. 1,25D3 pretreatment increased expression of TAp73 and its pro-apoptotic targets, in a VDR dependent manner. VDR and its transcriptional targets were induced after 1,25D3 treatment and further increased after the combination of 1,25D3 and cisplatin in a TAp73 dependent manner., Conclusions: Our data suggest that VitD deficiency could be a biomarker for poor response to cisplatin, and pretreating with VitD can increase the apoptotic response to cisplatin through VDR and TAp73 signaling crosstalk., (© 2019 The Authors. Cancer Medicine published by John Wiley & Sons Ltd.)- Published
- 2019
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21. ADHFE1 is a breast cancer oncogene and induces metabolic reprogramming.
- Author
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Mishra P, Tang W, Putluri V, Dorsey TH, Jin F, Wang F, Zhu D, Amable L, Deng T, Zhang S, Killian JK, Wang Y, Minas TZ, Yfantis HG, Lee DH, Sreekumar A, Bustin M, Liu W, Putluri N, and Ambs S
- Subjects
- Alcohol Oxidoreductases genetics, Breast Neoplasms genetics, Breast Neoplasms pathology, Female, Glutarates metabolism, Humans, MCF-7 Cells, Mitochondrial Proteins genetics, Proto-Oncogene Proteins c-myc genetics, Reactive Oxygen Species metabolism, Alcohol Oxidoreductases metabolism, Breast Neoplasms metabolism, Cell Dedifferentiation, Cellular Reprogramming, Mitochondrial Proteins metabolism, Proto-Oncogene Proteins c-myc metabolism, Signal Transduction
- Abstract
Metabolic reprogramming in breast tumors is linked to increases in putative oncogenic metabolites that may contribute to malignant transformation. We previously showed that accumulation of the oncometabolite, 2-hydroxyglutarate (2HG), in breast tumors was associated with MYC signaling, but not with isocitrate dehydrogenase (IDH) mutations, suggesting a distinct mechanism for increased 2HG in breast cancer. Here, we determined that D-2HG is the predominant enantiomer in human breast tumors and show that the D-2HG-producing mitochondrial enzyme, alcohol dehydrogenase, iron-containing protein 1 (ADHFE1), is a breast cancer oncogene that decreases patient survival. We found that MYC upregulates ADHFE1 through changes in iron metabolism while coexpression of both ADHFE1 and MYC strongly enhanced orthotopic tumor growth in MCF7 cells. Moreover, ADHFE1 promoted metabolic reprogramming with increased formation of D-2HG and reactive oxygen, a reductive glutamine metabolism, and modifications of the epigenetic landscape, leading to cellular dedifferentiation, enhanced mesenchymal transition, and phenocopying alterations that occur with high D-2HG levels in cancer cells with IDH mutations. Together, our data support the hypothesis that ADHFE1 and MYC signaling contribute to D-2HG accumulation in breast tumors and show that D-2HG is an oncogenic metabolite and potential driver of disease progression.
- Published
- 2018
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22. Cisplatin is retained in the cochlea indefinitely following chemotherapy.
- Author
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Breglio AM, Rusheen AE, Shide ED, Fernandez KA, Spielbauer KK, McLachlin KM, Hall MD, Amable L, and Cunningham LL
- Subjects
- Animals, Antineoplastic Agents administration & dosage, Antineoplastic Agents analysis, Antineoplastic Agents metabolism, Cisplatin administration & dosage, Cisplatin analysis, Cisplatin metabolism, Cochlea metabolism, Cochlea physiopathology, Female, Hearing Loss etiology, Hearing Loss metabolism, Hearing Loss physiopathology, Humans, Male, Mass Spectrometry, Mice, Inbred CBA, Stria Vascularis chemistry, Stria Vascularis metabolism, Antineoplastic Agents adverse effects, Cisplatin adverse effects, Cochlea chemistry, Neoplasms drug therapy
- Abstract
Cisplatin chemotherapy causes permanent hearing loss in 40-80% of treated patients. It is unclear whether the cochlea has unique sensitivity to cisplatin or is exposed to higher levels of the drug. Here we use inductively coupled plasma mass spectrometry (ICP-MS) to examine cisplatin pharmacokinetics in the cochleae of mice and humans. In most organs cisplatin is detected within one hour after injection, and is eliminated over the following days to weeks. In contrast, the cochlea retains cisplatin for months to years after treatment in both mice and humans. Using laser ablation coupled to ICP-MS, we map cisplatin distribution within the human cochlea. Cisplatin accumulation is consistently high in the stria vascularis, the region of the cochlea that maintains the ionic composition of endolymph. Our results demonstrate long-term retention of cisplatin in the human cochlea, and they point to the stria vascularis as an important therapeutic target for preventing cisplatin ototoxicity.
- Published
- 2017
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23. Sequence-Specific Pharmacokinetic and Pharmacodynamic Phase I/Ib Study of Olaparib Tablets and Carboplatin in Women's Cancer.
- Author
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Lee JM, Peer CJ, Yu M, Amable L, Gordon N, Annunziata CM, Houston N, Goey AK, Sissung TM, Parker B, Minasian L, Chiou VL, Murphy RF, Widemann BC, Figg WD, and Kohn EC
- Subjects
- Adult, Aged, Breast Neoplasms blood, Breast Neoplasms pathology, Carboplatin adverse effects, Carboplatin pharmacokinetics, DNA Adducts blood, Drug Administration Schedule, Drug-Related Side Effects and Adverse Reactions blood, Drug-Related Side Effects and Adverse Reactions pathology, Female, Humans, Leukocytes, Mononuclear drug effects, Leukocytes, Mononuclear pathology, Maximum Tolerated Dose, Middle Aged, Neoplasm Recurrence, Local blood, Neoplasm Recurrence, Local pathology, Ovarian Neoplasms blood, Ovarian Neoplasms pathology, Phthalazines adverse effects, Phthalazines pharmacokinetics, Piperazines adverse effects, Piperazines pharmacokinetics, Uterine Neoplasms blood, Uterine Neoplasms pathology, Breast Neoplasms drug therapy, Carboplatin administration & dosage, Ovarian Neoplasms drug therapy, Phthalazines administration & dosage, Piperazines administration & dosage, Uterine Neoplasms drug therapy
- Abstract
Purpose: Our preclinical studies showed that the PARP inhibitor, olaparib, prior to carboplatin attenuated carboplatin cytotoxicity. We evaluated sequence-specific pharmacokinetic and pharmacodynamic effects, safety, and activity of the combination. Experimental Design: Eligible patients had metastatic or recurrent women's cancer. Olaparib tablets were introduced (100 or 200 mg twice daily, days 1-7) in a 3 + 3 dose escalation with carboplatin AUC4 or 5 every 21 days, up to eight cycles, followed by olaparib 300 mg twice daily maintenance. Patients were randomly assigned to starting schedule: cohort A (olaparib days 1-7, carboplatin on day 8) or B (carboplatin on day 1, olaparib days 2-8) during cycle 1. Patients received the reversed scheme in cycle 2. Blood was collected for olaparib pharmacokinetics, platinum-DNA adducts, comet assay, and PAR concentrations. The primary objectives were to examine schedule-dependent effects on olaparib pharmacokinetics and platinum-DNA adducts. Results: A total of 77 (60 ovarian, 14 breast, and 3 uterine cancer) patients were treated. Dose-limiting toxicity was thrombocytopenia and neutropenia, defining olaparib 200 mg twice daily + carboplatin AUC4 as the MTD. Olaparib clearance was increased approximately 50% when carboplatin was given 24 hours before olaparib. In vitro experiments demonstrated carboplatin preexposure increased olaparib clearance due to intracellular olaparib uptake. Quantities of platinum-DNA adducts were not different as a function of the order of drug administration. Responses included 2 CRs and 31 PRs (46%) with a higher RR in BRCA mutation carriers compared with nonmutation carriers (68% vs. 19%). Conclusions: Tablet olaparib with carboplatin is a safe and active combination. Carboplatin preexposure causes intracellular olaparib accumulation reducing bioavailable olaparib, suggesting carboplatin should be administered prior to olaparib. Clin Cancer Res; 23(6); 1397-406. ©2016 AACR ., (©2016 American Association for Cancer Research.)
- Published
- 2017
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24. Cisplatin resistance and opportunities for precision medicine.
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Amable L
- Subjects
- Humans, Antineoplastic Agents adverse effects, Antineoplastic Agents therapeutic use, Cisplatin adverse effects, Cisplatin therapeutic use, Drug Resistance, Neoplasm drug effects, Neoplasms drug therapy, Precision Medicine methods
- Abstract
Cisplatin is one of the most commonly used chemotherapy drugs, treating a wide range of cancer types. Unfortunately, many cancers initially respond to platinum treatment but when the tumor returns, drug resistance frequently occurs. Resistance to cisplatin is attributed to three molecular mechanisms: increased DNA repair, altered cellular accumulation, and increased drug inactivation. The use of precision medicine to make informed decisions on a patient's cisplatin resistance status and predicting the tumor response would allow the clinician to tailor the chemotherapy program based on the biology of the disease. In this review, key biomarkers of each molecular mechanism will be discussed along with the current clinical research. Additionally, known polymorphisms for each biomarker will be discussed in relation to their influence on cisplatin resistance., (Published by Elsevier Ltd.)
- Published
- 2016
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25. PP2A inhibition with LB100 enhances cisplatin cytotoxicity and overcomes cisplatin resistance in medulloblastoma cells.
- Author
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Ho WS, Feldman MJ, Maric D, Amable L, Hall MD, Feldman GM, Ray-Chaudhury A, Lizak MJ, Vera JC, Robison RA, Zhuang Z, and Heiss JD
- Subjects
- Animals, Bridged Bicyclo Compounds, Heterocyclic administration & dosage, Cell Line, Tumor, Cerebellar Neoplasms enzymology, Cerebellar Neoplasms pathology, Cisplatin administration & dosage, Drug Resistance, Neoplasm, Drug Synergism, Humans, Medulloblastoma enzymology, Medulloblastoma pathology, Mice, Mice, SCID, Piperazines administration & dosage, Protein Phosphatase 2 metabolism, Xenograft Model Antitumor Assays, Antineoplastic Combined Chemotherapy Protocols pharmacology, Bridged Bicyclo Compounds, Heterocyclic pharmacology, Cerebellar Neoplasms drug therapy, Cisplatin pharmacology, Medulloblastoma drug therapy, Piperazines pharmacology, Protein Phosphatase 2 antagonists & inhibitors
- Abstract
The protein phosphatase 2A (PP2A) inhibitor, LB100, has been shown in pre-clinical studies to be an effective chemo- and radio-sensitizer for treatment of various cancers. We investigated effects associated with LB100 treatment alone and in combination with cisplatin for medulloblastoma (MB) in vitro and in vivo in an intracranial xenograft model. We demonstrated that LB100 had a potent effect on MB cells. By itself, LB100 inhibited proliferation and induced significant apoptosis in a range of pediatric MB cell lines. It also attenuated MB cell migration, a pre-requirement for invasion. When used in combination, LB100 enhanced cisplatin-mediated cytotoxic effects. Cell viability in the presence of 1 uM cisplatin alone was 61% (DAOY), 100% (D341), and 58% (D283), but decreased with the addition of 2 μM of LB100 to 26% (DAOY), 67% (D341), and 27% (D283), (p < 0.005). LB100 suppressed phosphorylation of the STAT3 protein and several STAT3 downstream targets. Also, LB100 directly increased cisplatin uptake and overcame cisplatin-resistance in vitro. Finally, LB100 exhibited potent in vivo anti-neoplastic activity in combination with cisplatin in an intracranial xenograft model.
- Published
- 2016
- Full Text
- View/download PDF
26. Gli1 contributes to cellular resistance to cisplatin through altered cellular accumulation of the drug.
- Author
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Amable L, Fain J, Gavin E, and Reed E
- Subjects
- Binding Sites, Cation Transport Proteins metabolism, Cell Line, Tumor, Copper Transporter 1, DNA Damage, Female, Humans, Organic Cation Transport Proteins metabolism, Zinc Finger Protein GLI1, Antineoplastic Agents pharmacokinetics, Cisplatin pharmacokinetics, Drug Resistance, Neoplasm, Ovarian Neoplasms metabolism, Transcription Factors antagonists & inhibitors, Transcription Factors metabolism
- Abstract
Cellular resistance to platinum anticancer compounds is governed by no less than two molecular processes; DNA repair and cellular accumulation of drug. Gli1 is an upstream regulator of nucleotide excision repair, effecting this process through c-jun. We, therefore, investigated whether Gli1 plays a role in cellular accumulation of cisplatin. Using a Gli1-specific shRNA, we explored the role of Gli1 in the cellular accumulation and efflux of cisplatin, in cisplatin-resistant A2780-CP70 human ovarian cancer cells. When Gli1 is inhibited, cellular uptake of cisplatin was approximately 33% of the level of uptake under control conditions. When Gli1 is inhibited, cellular efflux of cisplatin was completely abrogated, over a 12-h period of observation. We assayed nuclear lysates from these cells, for the ability to bind the DNA sequence that is the Gli-binding site (GBS) in the 5'UTR for each of five known cisplatin transmembrane transporters. Four of these transporters are active in cisplatin uptake; and, one is active in cisplatin efflux. In each case, nuclear lysate from A2780-CP70 cells binds the GBS of the respective cisplatin transport gene. We conclude that Gli1 plays a strong role in total cellular accumulation of cisplatin in these cells; and, that the combined effects on cellular accumulation of drug and on DNA repair may indicate a role for Gli1 in protecting cellular DNA from lethal types of DNA damage.
- Published
- 2014
- Full Text
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27. GLI1 upregulates C-JUN through a specific 130-kDa isoform.
- Author
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Amable L, Gavin E, Kudo K, Meng E, Rocconi RP, Shevde LA, and Reed E
- Subjects
- Cisplatin therapeutic use, DNA Damage drug effects, Female, Hedgehog Proteins metabolism, Humans, Ovarian Neoplasms drug therapy, Protein Isoforms genetics, Protein Isoforms metabolism, Transcription Factors metabolism, Tumor Cells, Cultured, Zinc Finger Protein GLI1, Drug Resistance, Neoplasm genetics, JNK Mitogen-Activated Protein Kinases genetics, Ovarian Neoplasms genetics, Transcription Factors genetics
- Abstract
The Hedgehog pathway is molecularly linked to increased resistance to cisplatin and increased repair of platinum-DNA damage, through C-JUN. GLI1, which has five known isoforms, is a positive transcriptional regulator in Hedgehog. Southwestern blot assay, EMSA and ChIP assays indicate that only one of five isoforms of GLI1 may be responsible for the Hedgehog link with C-JUN and thus, increased platinum-DNA adduct repair. Cancer tissues express this 130-kDa isoform at levels 6-fold higher than non-malignant tissues; and this isoform exists in abundance in six of seven ovarian cancer cell lines examined.
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- 2014
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- View/download PDF
28. Calcineurin regulates homologous desensitization of natriuretic peptide receptor-A and inhibits ANP-induced testosterone production in MA-10 cells.
- Author
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Henesy MB, Britain AL, Zhu B, Amable L, Honkanen RE, Corbin JD, Francis SH, and Rich TC
- Subjects
- Animals, Calcineurin genetics, Cell Line, Tumor, Computer Simulation, Cyclic GMP metabolism, Cyclic Nucleotide Phosphodiesterases, Type 5 metabolism, Genes, Reporter, Humans, Kinetics, Male, Mice, Models, Theoretical, NFATC Transcription Factors genetics, Phosphoprotein Phosphatases metabolism, Phosphorylation, RNA Interference, Signal Transduction drug effects, Atrial Natriuretic Factor pharmacology, Calcineurin metabolism, Receptors, Atrial Natriuretic Factor metabolism, Testosterone biosynthesis
- Abstract
Receptor desensitization is a ubiquitous regulatory mechanism that defines the activatable pool of receptors, and thus, the ability of cells to respond to environmental stimuli. In recent years, the molecular mechanisms controlling the desensitization of a variety of receptors have been established. However, little is known about the molecular mechanisms that underlie desensitization of natriuretic peptide receptors, including natriuretic peptide receptor-A (NPR-A). Here we report that calcineurin (protein phosphatase 2B, PP2B, PPP3C) regulates homologous desensitization of NPR-A in murine Leydig tumor (MA-10) cells. We demonstrate that both pharmacological inhibition of calcineurin activity and siRNA-mediated suppression of calcineurin expression potentiate atrial natriuretic peptide (ANP)-induced cGMP synthesis. Treatment of MA-10 cells with inhibitors of other phosphoprotein phosphatases had little or no effect on ANP-induced cGMP accumulation. In addition, overexpression of calcineurin blunts ANP-induced cGMP synthesis. We also present data indicating that the inhibition of calcineurin potentiates ANP-induced testosterone production. To better understand the contribution of calcineurin in the regulation of NPR-A activity, we examined the kinetics of ANP-induced cGMP signals. We observed transient ANP-induced cGMP signals, even in the presence of phosphodiesterase inhibitors. Inhibition of both calcineurin and phosphodiesterase dramatically slowed the decay in the response. These observations are consistent with a model in which calcineurin mediated dephosphorylation and desensitization of NPR-A is associated with significant inhibition of cGMP synthesis. PDE activity hydrolyzes cGMP, thus lowering intracellular cGMP toward the basal level. Taken together, these data suggest that calcineurin plays a previously unrecognized role in the desensitization of NPR-A and, thereby, inhibits ANP-mediated increases in testosterone production.
- Published
- 2012
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29. Disruption of serine/threonine protein phosphatase 5 (PP5:PPP5c) in mice reveals a novel role for PP5 in the regulation of ultraviolet light-induced phosphorylation of serine/threonine protein kinase Chk1 (CHEK1).
- Author
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Amable L, Grankvist N, Largen JW, Ortsäter H, Sjöholm Å, and Honkanen RE
- Subjects
- Actins genetics, Alleles, Animals, Blastocyst metabolism, Breeding, Cell Line, Checkpoint Kinase 1, Female, Fibroblasts drug effects, Fibroblasts metabolism, Fibroblasts radiation effects, HeLa Cells, Humans, Hydroxyurea pharmacology, Integrases genetics, Male, Mice, Nuclear Proteins metabolism, Phenotype, Phosphoprotein Phosphatases metabolism, Phosphorylation drug effects, Phosphorylation genetics, Phosphorylation radiation effects, Promoter Regions, Genetic genetics, Protein Kinases chemistry, Receptors, Neuropeptide Y metabolism, Serine metabolism, Tumor Suppressor Protein p53 metabolism, cdc25 Phosphatases metabolism, Nuclear Proteins deficiency, Nuclear Proteins genetics, Phosphoprotein Phosphatases deficiency, Phosphoprotein Phosphatases genetics, Protein Kinases metabolism, Ultraviolet Rays
- Abstract
PP5 is a ubiquitously expressed Ser/Thr protein phosphatase. High levels of PP5 have been observed in human cancers, and constitutive PP5 overexpression aids tumor progression in mouse models of tumor development. However, PP5 is highly conserved among species, and the roles of PP5 in normal tissues are not clear. Here, to help evaluate the biological actions of PP5, a Cre/loxP-conditional mouse line was generated. In marked contrast to the early embryonic lethality associated with the genetic disruption of other PPP family phosphatases (e.g. PP2A and PP4), intercrosses with mouse lines that ubiquitously express Cre recombinase starting early in development (e.g. MeuCre40 and ACTB-Cre) produced viable and fertile PP5-deficient mice. Phenotypic differences caused by the total disruption of PP5 were minor, suggesting that small molecule inhibitors of PP5 will not have widespread systemic toxicity. Examination of roles for PP5 in fibroblasts generated from PP5-deficient embryos (PP5(-/-) mouse embryonic fibroblasts) confirmed some known roles and identified new actions for PP5. PP5(-/-) mouse embryonic fibroblasts demonstrated increased sensitivity to UV light, hydroxyurea, and camptothecin, which are known activators of ATR (ataxia-telangiectasia and Rad3-related) kinase. Further study revealed a previously unrecognized role for PP5 downstream of ATR activation in a UV light-induced response. The genetic disruption of PP5 is associated with enhanced and prolonged phosphorylation of a single serine (Ser-345) on Chk1, increased phosphorylation of the p53 tumor suppressor protein (p53) at serine 18, and increased p53 protein levels. A comparable role for PP5 in the regulation of Chk1 phosphorylation was also observed in human cells.
- Published
- 2011
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30. Structure-activity relationship studies of fostriecin, cytostatin, and key analogs, with PP1, PP2A, PP5, and( beta12-beta13)-chimeras (PP1/PP2A and PP5/PP2A), provide further insight into the inhibitory actions of fostriecin family inhibitors.
- Author
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Swingle MR, Amable L, Lawhorn BG, Buck SB, Burke CP, Ratti P, Fischer KL, Boger DL, and Honkanen RE
- Subjects
- Alkenes chemistry, Alkenes metabolism, Amino Acid Sequence, Animals, Catalytic Domain drug effects, Catalytic Domain genetics, Cattle, Enzyme Inhibitors metabolism, Molecular Sequence Data, Mutagenesis, Site-Directed, Mutant Chimeric Proteins genetics, Mutant Chimeric Proteins metabolism, Nuclear Proteins genetics, Nuclear Proteins metabolism, Organophosphates chemistry, Phosphoprotein Phosphatases genetics, Phosphoprotein Phosphatases metabolism, Polyenes, Protein Binding drug effects, Protein Phosphatase 1 genetics, Protein Phosphatase 1 metabolism, Protein Phosphatase 2 genetics, Protein Phosphatase 2 metabolism, Protein Structure, Tertiary drug effects, Pyrones chemistry, Pyrones metabolism, Rabbits, Structure-Activity Relationship, Alkenes pharmacology, Enzyme Inhibitors chemistry, Enzyme Inhibitors pharmacology, Mutant Chimeric Proteins antagonists & inhibitors, Nuclear Proteins antagonists & inhibitors, Organophosphates pharmacology, Phosphoprotein Phosphatases antagonists & inhibitors, Protein Phosphatase 1 antagonists & inhibitors, Protein Phosphatase 2 antagonists & inhibitors, Pyrones pharmacology
- Abstract
Fostriecin and cytostatin are structurally related natural inhibitors of serine/threonine phosphatases, with promising antitumor activity. The total synthesis of these antitumor agents has enabled the production of structural analogs, which are useful to explore the biological significance of features contained in the parent compounds. Here, the inhibitory activity of fostriecin, cytostatin, and 10 key structural analogs were tested in side-by-side phosphatase assays to further characterize their inhibitory activity against PP1c (Ser/Thr protein phosphatase 1 catalytic subunit), PP2Ac (Ser/Thr protein phosphatase 2A catalytic subunit), PP5c (Ser/Thr protein phosphatase 5 catalytic subunit), and chimeras of PP1 (Ser/Thr protein phosphatase 1) and PP5 (Ser/Thr protein phosphatase 5), in which key residues predicted for inhibitor contact with PP2A (Ser/Thr protein phosphatase 2A) were introduced into PP1 and PP5 using site-directed mutagenesis. The data confirm the importance of the C9-phosphate and C11-alcohol for general inhibition and further demonstrate the importance of a predicted C3 interaction with a unique cysteine (Cys(269)) in the beta12-beta13 loop of PP2A. The data also indicate that additional features beyond the unsaturated lactone contribute to inhibitory potency and selectivity. Notably, a derivative of fostriecin lacking the entire lactone subunit demonstrated marked potency and selectivity for PP2A, while having substantially reduced and similar activity against PP1 and PP1/PP2A- PP5/PP2A-chimeras that have greatly increased sensitivity to both fostriecin and cytostatin. This suggests that other features [e.g., the (Z,Z,E)-triene] also contribute to inhibitory selectivity. When considered together with previous data, these studies suggest that, despite the high structural conservation of the catalytic site in PP1, PP2A and PP5, the development of highly selective catalytic inhibitors should be feasible.
- Published
- 2009
- Full Text
- View/download PDF
31. Elevated levels of Ser/Thr protein phosphatase 5 (PP5) in human breast cancer.
- Author
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Golden T, Aragon IV, Rutland B, Tucker JA, Shevde LA, Samant RS, Zhou G, Amable L, Skarra D, and Honkanen RE
- Subjects
- Animals, Cell Death, Cell Line, Tumor, Doxorubicin pharmacology, Humans, Mice, Mice, Nude, Nuclear Proteins, Oxidative Stress, Phosphoprotein Phosphatases, Threonine, Time Factors, Ultraviolet Rays, Up-Regulation, Vinblastine pharmacology, Breast Neoplasms enzymology, Carcinoma, Ductal, Breast enzymology, Carcinoma, Intraductal, Noninfiltrating enzymology
- Abstract
Ser/Thr protein phosphatase 5 (PP5) regulates several signaling-cascades that suppress growth and/or facilitate apoptosis in response to genomic stress. The expression of PP5 is responsive to hypoxia inducible factor-1 (HIF-1) and estrogen, which have both been linked to the progression of human breast cancer. Still, it is not clear if PP5 plays a role in the development of human cancer. Here, immunostaining of breast cancer tissue-microarrays (TMAs) revealed a positive correlation between PP5 over-expression and ductal carcinoma in situ (DCIS; P value 0.0028), invasive ductal carcinoma (IDC; P value 0.012) and IDC with metastases at the time of diagnosis (P value 0.0001). In a mouse xenograft model, the constitutive over-expression of PP5 was associated with an increase in the rate of tumor growth. In a MCF-7 cell culture model over-expression correlated with both an increase in the rate of proliferation and protection from cell death induced by oxidative stress, UVC-irradiation, adriamycin, and vinblastine. PP5 over-expression had no apparent effect on the sensitivity of MCF-7 cells to taxol or rapamycin. Western analysis of extracts from cells over-expressing PP5 revealed a decrease in the phosphorylation of known substrates for PP5. Together, these studies indicate that elevated levels of PP5 protein occur in human breast cancer and suggest that PP5 over-expression may aid tumor progression.
- Published
- 2008
- Full Text
- View/download PDF
32. Total synthesis and evaluation of cytostatin, its C10-C11 diastereomers, and additional key analogues: impact on PP2A inhibition.
- Author
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Lawhorn BG, Boga SB, Wolkenberg SE, Colby DA, Gauss CM, Swingle MR, Amable L, Honkanen RE, and Boger DL
- Subjects
- Alkenes pharmacology, Animals, Cell Proliferation drug effects, Drug Screening Assays, Antitumor, Enzyme Inhibitors chemistry, Humans, Leukemia L1210, Mice, Models, Molecular, Molecular Conformation, Organophosphates chemistry, Polyenes, Pyrones chemistry, Stereoisomerism, Structure-Activity Relationship, Enzyme Inhibitors chemical synthesis, Enzyme Inhibitors pharmacology, Organophosphates chemical synthesis, Organophosphates pharmacology, Phosphoprotein Phosphatases antagonists & inhibitors, Pyrones chemical synthesis, Pyrones pharmacology
- Abstract
The total synthesis of cytostatin, an antitumor agent belonging to the fostriecin family of natural products, is described in full detail. The convergent approach relied on a key epoxide-opening reaction to join the two stereotriad units and a single-step late-stage stereoselective installation of the sensitive (Z,Z,E)-triene through a beta-chelation-controlled nucleophilic addition. The synthetic route provided rapid access to the C4-C6 stereoisomers of the cytostatin lactone, which were prepared and used to define the C4-C6 relative stereochemistry of the natural product. In addition to the natural product, each of the C10-C11 diastereomers of cytostatin was divergently prepared (11 steps from key convergence step) by this route and used to unequivocally confirm the relative and absolute stereochemistry of cytostatin. Each of the cytostatin diastereomers exhibited a reduced activity toward inhibition of PP2A (>100-fold), demonstrating the importance of the presence and stereochemistry of the C10-methyl and C11-hydroxy groups for potent PP2A inhibition. Extensions of the studies provided dephosphocytostatin, sulfocytostatin (a key analogue related to the natural product sultriecin), 11-deshydroxycytostatin, and an analogue lacking the entire C12-C18 (Z,Z,E)-triene segment, which were used to define the magnitude of the C9-phosphate (>4000-fold), C11-alcohol (250-fold), and triene (220-fold) contribution to PP2A inhibition. A model of cytostatin bound to the active site of PP2A is presented, compared to that of fostriecin, which is also presented in detail for the first time, and used to provide insights into the role of the key substituents. Notably, the alpha,beta unsaturated lactone of cytostatin, like that of fostriecin, is projected to serve as a key electrophile, providing a covalent adduct with Cys269 unique to PP2A, contributing to its potency (> or =200-fold for fostriecin) and accounting for its selectivity.
- Published
- 2006
- Full Text
- View/download PDF
33. Family 18 chitinase-oligosaccharide substrate interaction: subsite preference and anomer selectivity of Serratia marcescens chitinase A.
- Author
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Aronson NN Jr, Halloran BA, Alexyev MF, Amable L, Madura JD, Pasupulati L, Worth C, and Van Roey P
- Subjects
- Binding Sites, Chitin chemistry, Chitinases chemistry, Chitinases genetics, Crystallography, X-Ray, Hydrolysis, Isomerism, Mass Spectrometry, Models, Molecular, Mutation, Oligosaccharides metabolism, Substrate Specificity, Chitin metabolism, Chitinases metabolism, Serratia marcescens enzymology
- Abstract
The sizes and anomers of the products formed during the hydrolysis of chitin oligosaccharides by the Family 18 chitinase A (ChiA) from Serratia marcescens were analysed by hydrophilic interaction chromatography using a novel approach in which reactions were performed at 0 degrees C to stabilize the anomer conformations of the initial products. Crystallographic studies of the enzyme, having the structure of the complex of the ChiA E315L (Glu315-->Leu) mutant with a hexasaccharide, show that the oligosaccharide occupies subsites -4 to +2 in the substrate-binding cleft, consistent with the processing of beta-chitin by the release of disaccharide at the reducing end. Products of the hydrolysis of hexa- and penta-saccharides by wild-type ChiA, as well as by two mutants of the residues Trp275 and Phe396 important in binding the substrate at the +1 and +2 sites, show that the substrates only occupy sites -2 to +2 and that additional N -acetyl-D-glucosamines extend beyond the substrate-binding cleft at the reducing end. The subsites -3 and -4 are not used in this four-site binding mode. The explanation for these results is found in the high importance of individual binding sites for the processing of short oligosaccharides compared with the cumulative recognition and processive hydrolysis mechanism used to digest natural beta-chitin.
- Published
- 2003
- Full Text
- View/download PDF
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