1,235 results on '"Alvarsson A"'
Search Results
2. Mammary duct luminal epithelium controls adipocyte thermogenic programme
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Patel, Sanil, Sparman, Njeri ZR, Arneson, Douglas, Alvarsson, Alexandra, Santos, Luís C, Duesman, Samuel J, Centonze, Alessia, Hathaway, Ephraim, Ahn, In Sook, Diamante, Graciel, Cely, Ingrid, Cho, Chung Hwan, Talari, Noble Kumar, Rajbhandari, Abha K, Goedeke, Leigh, Wang, Peng, Butte, Atul J, Blanpain, Cédric, Chella Krishnan, Karthickeyan, Lusis, Aldons J, Stanley, Sarah A, Yang, Xia, and Rajbhandari, Prashant
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Obesity ,Genetics ,Women's Health ,2.1 Biological and endogenous factors ,1.1 Normal biological development and functioning ,Animals ,Female ,Male ,Mice ,Adipocytes ,Adipose Tissue ,White ,Epithelium ,Thermogenesis ,Uncoupling Protein 1 ,Mammary Glands ,Animal ,Cold Temperature ,Sympathetic Nervous System ,Energy Metabolism ,Oxidation-Reduction ,Sex Characteristics ,General Science & Technology - Abstract
Sympathetic activation during cold exposure increases adipocyte thermogenesis via the expression of mitochondrial protein uncoupling protein 1 (UCP1)1. The propensity of adipocytes to express UCP1 is under a critical influence of the adipose microenvironment and varies between sexes and among various fat depots2-7. Here we report that mammary gland ductal epithelial cells in the adipose niche regulate cold-induced adipocyte UCP1 expression in female mouse subcutaneous white adipose tissue (scWAT). Single-cell RNA sequencing shows that glandular luminal epithelium subtypes express transcripts that encode secretory factors controlling adipocyte UCP1 expression under cold conditions. We term these luminal epithelium secretory factors 'mammokines'. Using 3D visualization of whole-tissue immunofluorescence, we reveal sympathetic nerve-ductal contact points. We show that mammary ducts activated by sympathetic nerves limit adipocyte UCP1 expression via the mammokine lipocalin 2. In vivo and ex vivo ablation of mammary duct epithelium enhance the cold-induced adipocyte thermogenic gene programme in scWAT. Since the mammary duct network extends throughout most of the scWAT in female mice, females show markedly less scWAT UCP1 expression, fat oxidation, energy expenditure and subcutaneous fat mass loss compared with male mice, implicating sex-specific roles of mammokines in adipose thermogenesis. These results reveal a role of sympathetic nerve-activated glandular epithelium in adipocyte UCP1 expression and suggest that mammary duct luminal epithelium has an important role in controlling glandular adiposity.
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- 2023
3. Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases: Workshop Proceedings.
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Mastracci, Teresa L, Apte, Minoti, Amundadottir, Laufey T, Alvarsson, Alexandra, Artandi, Steven, Bellin, Melena D, Bernal-Mizrachi, Ernesto, Caicedo, Alejandro, Campbell-Thompson, Martha, Cruz-Monserrate, Zobeida, El Ouaamari, Abdelfattah, Gaulton, Kyle J, Geisz, Andrea, Goodarzi, Mark O, Hara, Manami, Hull-Meichle, Rebecca L, Kleger, Alexander, Klein, Alison P, Kopp, Janel L, Kulkarni, Rohit N, Muzumdar, Mandar D, Naren, Anjaparavanda P, Oakes, Scott A, Olesen, Søren S, Phelps, Edward A, Powers, Alvin C, Stabler, Cherie L, Tirkes, Temel, Whitcomb, David C, Yadav, Dhiraj, Yong, Jing, Zaghloul, Norann A, Pandol, Stephen J, and Sander, Maike
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Biomedical and Clinical Sciences ,Clinical Sciences ,Digestive Diseases ,Rare Diseases ,Cancer ,Pancreatic Cancer ,Diabetes ,Metabolic and endocrine ,Good Health and Well Being ,Humans ,Diabetes Mellitus ,Islets of Langerhans ,Pancreas ,Pancreas ,Exocrine ,Pancreatic Diseases ,Medical and Health Sciences ,Endocrinology & Metabolism ,Biomedical and clinical sciences - Abstract
The Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases workshop was a 1.5-day scientific conference at the National Institutes of Health (Bethesda, MD) that engaged clinical and basic science investigators interested in diseases of the pancreas. This report provides a summary of the proceedings from the workshop. The goals of the workshop were to forge connections and identify gaps in knowledge that could guide future research directions. Presentations were segregated into six major theme areas, including 1) pancreas anatomy and physiology, 2) diabetes in the setting of exocrine disease, 3) metabolic influences on the exocrine pancreas, 4) genetic drivers of pancreatic diseases, 5) tools for integrated pancreatic analysis, and 6) implications of exocrine-endocrine cross talk. For each theme, multiple presentations were followed by panel discussions on specific topics relevant to each area of research; these are summarized here. Significantly, the discussions resulted in the identification of research gaps and opportunities for the field to address. In general, it was concluded that as a pancreas research community, we must more thoughtfully integrate our current knowledge of normal physiology as well as the disease mechanisms that underlie endocrine and exocrine disorders so that there is a better understanding of the interplay between these compartments.
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- 2023
4. CPSign: conformal prediction for cheminformatics modeling
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Staffan Arvidsson McShane, Ulf Norinder, Jonathan Alvarsson, Ernst Ahlberg, Lars Carlsson, and Ola Spjuth
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Information technology ,T58.5-58.64 ,Chemistry ,QD1-999 - Abstract
Abstract Conformal prediction has seen many applications in pharmaceutical science, being able to calibrate outputs of machine learning models and producing valid prediction intervals. We here present the open source software CPSign that is a complete implementation of conformal prediction for cheminformatics modeling. CPSign implements inductive and transductive conformal prediction for classification and regression, and probabilistic prediction with the Venn-ABERS methodology. The main chemical representation is signatures but other types of descriptors are also supported. The main modeling methodology is support vector machines (SVMs), but additional modeling methods are supported via an extension mechanism, e.g. DeepLearning4J models. We also describe features for visualizing results from conformal models including calibration and efficiency plots, as well as features to publish predictive models as REST services. We compare CPSign against other common cheminformatics modeling approaches including random forest, and a directed message-passing neural network. The results show that CPSign produces robust predictive performance with comparative predictive efficiency, with superior runtime and lower hardware requirements compared to neural network based models. CPSign has been used in several studies and is in production-use in multiple organizations. The ability to work directly with chemical input files, perform descriptor calculation and modeling with SVM in the conformal prediction framework, with a single software package having a low footprint and fast execution time makes CPSign a convenient and yet flexible package for training, deploying, and predicting on chemical data. CPSign can be downloaded from GitHub at https://github.com/arosbio/cpsign . Scientific contribution CPSign provides a single software that allows users to perform data preprocessing, modeling and make predictions directly on chemical structures, using conformal and probabilistic prediction. Building and evaluating new models can be achieved at a high abstraction level, without sacrificing flexibility and predictive performance—showcased with a method evaluation against contemporary modeling approaches, where CPSign performs on par with a state-of-the-art deep learning based model.
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- 2024
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5. Glucose-Lowering Medications and Post-Dementia Survival in Patients with Diabetes and Dementia
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Secnik, Juraj, primary, Xu, Hong, additional, Schwertner, Emilia, additional, Hammar, Niklas, additional, Alvarsson, Michael, additional, Winblad, Bengt, additional, Eriksdotter, Maria, additional, Garcia-Ptacek, Sara, additional, and Religa, Dorota, additional
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- 2024
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6. Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases
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Mastracci, Teresa L, Apte, Minoti, Amundadottir, Laufey T, Alvarsson, Alexandra, Artandi, Steven, Bellin, Melena D, Bernal-Mizrachi, Ernesto, Caicedo, Alejandro, Campbell-Thompson, Martha, Cruz-Monserrate, Zobeida, Ouaamari, Abdelfattah El, Gaulton, Kyle J, Geisz, Andrea, Goodarzi, Mark O, Hara, Manami, Hull-Meichle, Rebecca L, Kleger, Alexander, Klein, Alison P, Kopp, Janel L, Kulkarni, Rohit N, Muzumdar, Mandar D, Naren, Anjaparavanda P, Oakes, Scott A, Olesen, Søren S, Phelps, Edward A, Powers, Alvin C, Stabler, Cherie L, Tirkes, Temel, Whitcomb, David C, Yadav, Dhiraj, Yong, Jing, Zaghloul, Norann A, Sander, Maike, and Pandol, Stephen J
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Diabetes ,Digestive Diseases ,Rare Diseases ,Cancer ,Pancreatic Cancer ,Metabolic and endocrine ,Good Health and Well Being ,Humans ,Diabetes Mellitus ,Islets of Langerhans ,Pancreas ,Pancreas ,Exocrine ,Pancreatic Diseases ,exocrine pancreas ,endocrine pancreas ,exocrine-endocrine crosstalk ,integrated physiology ,interpancreatic communication ,AP ,acute pancreatitis ,AP-D ,acute pancreatitis-related diabetes ,CCK ,cholecystokinin ,cCRE ,cis-regulatory element ,CF ,cystic fibrosis ,CFRD ,cystic fibrosis-related diabetes ,CFTR ,cystic fibrosis transmembrane conductance regulator ,CP ,chronic pancreatitis ,CP-D ,chronic pancreatitis-related diabetes ,ECM ,extracellular matrix ,eIF5A ,eukaryotic initiation factor 5A ,EPI ,exocrine pancreatic insufficiency ,GWAS ,genome-wide association study ,MRI ,magnetic resonance imaging ,MRCP ,magnetic resonance cholangiopancreatography ,NIDDK ,National Institute of Diabetes and Digestive and Kidney Diseases ,NIH ,National Institutes of Health ,PSC ,pancreatic stellate cells ,PDAC ,pancreatic ductal adenocarcinoma ,PDLO ,pancreatic-duct-like organoid ,PRSS1 ,trypsinogen ,T1D ,type 1 diabetes ,T2D ,type 2 diabetes ,Clinical Sciences ,Gastroenterology & Hepatology - Abstract
AbstractThe "Integrated Physiology of the Exocrine and Endocrine Compartments in Pancreatic Diseases" Workshop was a 1.5-day scientific conference at the National Institutes of Health (Bethesda, MD) that engaged clinical and basic science investigators interested in diseases of the pancreas. This report summarizes the workshop proceedings. The goal of the workshop was to forge connections and identify gaps in knowledge that could guide future research directions. Presentations were segregated into 6 major themes, including (a) Pancreas Anatomy and Physiology; (b) Diabetes in the Setting of Exocrine Disease; (c) Metabolic Influences on the Exocrine Pancreas; (d) Genetic Drivers of Pancreatic Diseases; (e) Tools for Integrated Pancreatic Analysis; and (f) Implications of Exocrine-Endocrine Crosstalk. For each theme, there were multiple presentations followed by panel discussions on specific topics relevant to each area of research; these are summarized herein. Significantly, the discussions resulted in the identification of research gaps and opportunities for the field to address. In general, it was concluded that as a pancreas research community, we must more thoughtfully integrate our current knowledge of the normal physiology as well as the disease mechanisms that underlie endocrine and exocrine disorders so that there is a better understanding of the interplay between these compartments.
- Published
- 2022
7. Comparative effectiveness of glucagon-like peptide-1 agonists, dipeptidyl peptidase-4 inhibitors, and sulfonylureas on the risk of dementia in older individuals with type 2 diabetes in Sweden: an emulated trial study
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Tang, Bowen, Sjölander, Arvid, Wastesson, Jonas W., Maura, Géric, Blotiere, Pierre-Olivier, Szilcz, Máté, Mak, Jonathan K.L., Qin, Chenxi, Alvarsson, Michael, Religa, Dorota, Johnell, Kristina, and Hägg, Sara
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- 2024
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8. Maternal thyroid function and offspring birth anthropometrics in women with polycystic ovary syndrome
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Anastasia Trouva, Michael Alvarsson, Jan Calissendorff, Bjørn Olav Åsvold, Dorina Ujvari, Angelica Lindén Hirschberg, and Eszter Vanky
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thyroid function ,pregnancy ,birthweight ,birth length ,birth head circumference ,PCOS ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
ObjectivesPolycystic ovary syndrome (PCOS) and thyroid disorders have both been linked to adverse pregnancy and neonatal outcomes. Even small variations in thyroid function within the normal range may influence fetal growth. Our aim was to investigate whether maternal thyroid function is associated with newborn anthropometrics in PCOS and explore the potential modifying effect of metformin.MethodsPost-hoc analyses of two RCTs in which pregnant women with PCOS were randomized to metformin or placebo, from first trimester to delivery. Maternal serum levels of thyroid stimulating hormone (TSH) and free thyroxine (fT4) were measured at gestational weeks (gw) 5–12, 19, 32 and 36 in 309 singleton pregnancies. The mean z-scores of birthweight, birth length, and head circumference were estimated in the offspring. Associations of maternal thyroid parameters with offspring anthropometrics and the outcomes large for gestational age (LGA) and small for gestational age (SGA) were studied using linear and logistic regression models, with adjustment for body mass index (BMI) when relevant.ResultsMaternal fT4 at baseline was negatively associated with birth length (b= -0.09, p=0.048). Furthermore, ΔfT4 during pregnancy correlated positively to z-score of both birth weight and length (b=0.10, p=0.017 and b=0.10, p=0.047 respectively), independently of treatment group. TSH at baseline and gw19 was inversely associated with LGA (OR 0.47, p=0.012 and OR 0.58, p=0.042), while ΔTSH was positively associated with LGA (OR 1.99, p=0.023). There were inverse associations between TSH at baseline and SGA (OR 0.32, p=0.005) and between ΔfT4 and SGA (OR 0.59, p=0.005) in the metformin group only. There were no associations between maternal thyroid function and head circumference of the newborns.ConclusionIn women with PCOS, a higher maternal fT4 in early pregnancy and a greater decrease in fT4 during pregnancy was associated with a lower offspring birthweight and shorter birth length. Higher TSH by mid-gestation and smaller increase in TSH during pregnancy was associated with less risk of LGA. Subclinical variations in maternal thyroid function might play a role for birth anthropometrics of PCOS offspring.
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- 2024
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9. A retrospective analysis of amputation rates in diabetic patients: can lower extremity amputations be further prevented?
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Alvarsson Alexandra, Sandgren Buster, Wendel Carl, Alvarsson Michael, and Brismar Kerstin
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Lower extremity amputations ,Diabetic foot ,Foot ulcer ,Diabetic complications ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Abstract Background Lower extremity amputations are costly and debilitating complications in patients with diabetes mellitus (DM). Our aim was to investigate changes in the amputation rate in patients with DM at the Karolinska University Hospital in Solna (KS) following the introduction of consensus guidelines for treatment and prevention of diabetic foot complications, and to identify risk groups of lower extremity amputations that should be targeted for preventive treatment. Methods 150 diabetic and 191 nondiabetic patients were amputated at KS between 2000 and 2006; of these 102 diabetic and 99 nondiabetic patients belonged to the catchment area of KS. 21 diabetic patients who belonged to KS catchment area were amputated at Danderyd University Hospital. All patients' case reports were searched for diagnoses of diabetes, vascular disorders, kidney disorders, and ulcer infections of the foot. Results There was a 60% reduction in the rate of amputations performed above the ankle in patients with DM during the study period. Patients with DM who underwent amputations were more commonly affected by foot infections and kidney disorders compared to the nondiabetic control group. Women with DM were 10 years older than the men when amputated, whereas men with DM underwent more multiple amputations and had more foot infections compared to the women. 88% of all diabetes-related amputations were preceded by foot ulcers. Only 30% of the patients had been referred to the multidisciplinary foot team prior to the decision of amputation. Conclusions These findings indicate a reduced rate of major amputations in diabetic patients, which suggests an implementation of the consensus guidelines of foot care. We also propose further reduced amputation rates if patients with an increased risk of future amputation (i.e. male sex, kidney disease) are identified and offered preventive treatment early.
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- 2012
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10. 1509-H Quantitative assessment of the tumor microenvironment using the Aurora™ 3D Spatial Biology Platform
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David Simmons, Guy Travis Clifton, Caleb Stoltzfus, Alexandra Alvarsson, Anna DeWitt, Jasmine Wilson, Nathan Grant, Brandy Olin, Bonnie Phillips, Laura A Dillon, and Nicholas Reder
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Published
- 2023
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11. Stimulation of Erythrocyte Soluble Guanylyl Cyclase Induces cGMP Export and Cardioprotection in Type 2 Diabetes
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Jiao, Tong, Collado, Aida, Mahdi, Ali, Tengbom, John, Tratsiakovich, Yahor, Milne, G. Todd, Alvarsson, Michael, Lundberg, Jon O., Zhou, Zhichao, Yang, Jiangning, and Pernow, John
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- 2023
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12. Mapping and targeted viral activation of pancreatic nerves in mice reveal their roles in the regulation of glucose metabolism
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Jimenez-Gonzalez, M., Li, R., Pomeranz, L. E., Alvarsson, A., Marongiu, R., Hampton, R. F., Kaplitt, M. G., Vasavada, R. C., Schwartz, G. J., and Stanley, S. A.
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- 2022
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13. Predictors of the Use of a Mental Health–Focused eHealth System in Patients With Breast and Prostate Cancer: Bayesian Structural Equation Modeling Analysis of a Prospective Study
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Nuhamin Gebrewold Petros, Jesper Alvarsson-Hjort, Gergö Hadlaczky, Danuta Wasserman, Manuel Ottaviano, Sergio Gonzalez-Martinez, Sara Carletto, Enzo Pasquale Scilingo, Gaetano Valenza, and Vladimir Carli
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Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
BackgroundeHealth systems have been increasingly used to manage depressive symptoms in patients with somatic illnesses. However, understanding the factors that drive their use, particularly among patients with breast and prostate cancer, remains a critical area of research. ObjectiveThis study aimed to determine the factors influencing use of the NEVERMIND eHealth system among patients with breast and prostate cancer over 12 weeks, with a focus on the Technology Acceptance Model. MethodsData from the NEVERMIND trial, which included 129 patients with breast and prostate cancer, were retrieved. At baseline, participants completed questionnaires detailing demographic data and measuring depressive and stress symptoms using the Beck Depression Inventory–II and the Depression, Anxiety, and Stress Scale–21, respectively. Over a 12-week period, patients engaged with the NEVERMIND system, with follow-up questionnaires administered at 4 weeks and after 12 weeks assessing the system’s perceived ease of use and usefulness. Use log data were collected at the 2- and 12-week marks. The relationships among sex, education, baseline depressive and stress symptoms, perceived ease of use, perceived usefulness (PU), and system use at various stages were examined using Bayesian structural equation modeling in a path analysis, a technique that differs from traditional frequentist methods. ResultsThe path analysis was conducted among 100 patients with breast and prostate cancer, with 66% (n=66) being female and 81% (n=81) having a college education. Patients reported good mental health scores, with low levels of depression and stress at baseline. System use was approximately 6 days in the initial 2 weeks and 45 days over the 12-week study period. The results revealed that PU was the strongest predictor of system use at 12 weeks (βuse at 12 weeks is predicted by PU at 12 weeks=.384), whereas system use at 2 weeks moderately predicted system use at 12 weeks (βuse at 12 weeks is predicted by use at 2 weeks=.239). Notably, there were uncertain associations between baseline variables (education, sex, and mental health symptoms) and system use at 2 weeks, indicating a need for better predictors for early system use. ConclusionsThis study underscores the importance of PU and early engagement in patient engagement with eHealth systems such as NEVERMIND. This suggests that, in general eHealth implementations, caregivers should educate patients about the benefits and functionalities of such systems, thus enhancing their understanding of potential health impacts. Concentrating resources on promoting early engagement is also essential given its influence on sustained use. Further research is necessary to clarify the remaining uncertainties, enabling us to refine our strategies and maximize the benefits of eHealth systems in health care settings.
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- 2023
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14. Maladaptive positive feedback production of ChREBPβ underlies glucotoxic β-cell failure
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Liora S. Katz, Gabriel Brill, Pili Zhang, Anil Kumar, Sharon Baumel-Alterzon, Lee B. Honig, Nicolás Gómez-Banoy, Esra Karakose, Marius Tanase, Ludivine Doridot, Alexandra Alvarsson, Bennett Davenport, Peng Wang, Luca Lambertini, Sarah A. Stanley, Dirk Homann, Andrew F. Stewart, James C. Lo, Mark A. Herman, Adolfo Garcia-Ocaña, and Donald K. Scott
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Science - Abstract
ChREBP is a glucose-responsive transcription factor, which regulates glucose-mediated proliferation and cell death in pancreatic β-cells. Here the authors show that the acute feed forward induction of ChREBPβ is required for adaptive β-cell expansion, that chronic overexpression of ChREBPβ is toxic to β-cells, and offer mitigation strategies
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- 2022
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15. In Silico Predictions of the Gastrointestinal Uptake of Macrocycles in Man Using Conformal Prediction Methodology
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Fagerholm, Urban, Hellberg, Sven, Alvarsson, Jonathan, and Spjuth, Ola
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- 2022
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16. Red blood cells as potential materials for microRNA biomarker study: overcoming heparin-related challenges.
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Kontidou, Eftychia, Humoud, Rawan, Chernogubova, Ekaterina, Alvarsson, Michael, Maegdefessel, Lars, Collado, Aida, Pernow, John, and Zhou, Zhichao
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GENE expression ,ERYTHROCYTES ,TYPE 2 diabetes ,HEART metabolism disorders ,RNA sequencing - Abstract
microRNAs (miRNAs) have been intensively studied as valuable biomarkers in cardiometabolic disease. Typically, miRNAs are detected in plasma or serum, but the use of samples collected in heparinized tubes is problematic for miRNA studies using quantitative PCR (qPCR). Heparin and its derivatives interfere with qPCR-based analysis, leading to a substantial reduction or even complete loss of detectable miRNA levels. Given that red blood cells (RBCs) express abundant miRNAs, whose expression is altered in cardiometabolic disease, RBCs could serve as an attractive alternative in biomarker studies. Here, we aim to explore the stability of miRNAs in RBCs collected from whole blood with different anticoagulants and thereby the potential of RBCs as alternative materials for miRNA biomarker studies. miRNA profiling was performed in human RBCs via RNA sequencing, followed by qPCR validation of selected miRNAs in RBCs and plasma in both heparinized and EDTA tubes. RNA sequencing revealed abundant miRNA presence in RBCs isolated from blood collected in EDTA tubes. miR-210-3p, miR-21-5p, miR-16-5p, and miR-451a were detected at comparable levels in RBCs isolated from both heparinized and EDTA tubes but not in plasma from heparinized tubes. Of note, miR-210-3p levels were consistently lower in RBCs from individuals with type 2 diabetes compared with healthy controls, regardless of anticoagulant type, supporting their potential as biomarker materials. In conclusion, RBCs offer a promising alternative for miRNA biomarker studies, overcoming heparin-related challenges. NEW & NOTEWORTHY: microRNAs are valuable biomarkers in cardiometabolic disease, but heparinized tubes hinder their detection because of qPCR interference. RBCs, which express abundant microRNAs like miR-210-3p, may serve as an alternative. microRNAs, including miR-210-3p, are consistently detectable in RBCs at comparable levels between heparinized and EDTA tubes. miR-210-3p levels in RBCs are similarly reduced in heparinized tubes of patients with type 2 diabetes. Thus, RBCs offer a promising solution for miRNA biomarker studies, overcoming heparin-related challenges. [ABSTRACT FROM AUTHOR]
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- 2024
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17. Author Correction: Maladaptive positive feedback production of ChREBPβ underlies glucotoxic β-cell failure
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Katz, Liora S., Brill, Gabriel, Zhang, Pili, Kumar, Anil, Baumel-Alterzon, Sharon, Honig, Lee B., Gómez-Banoy, Nicolás, Karakose, Esra, Tanase, Marius, Doridot, Ludivine, Alvarsson, Alexandra, Davenport, Bennett, Wang, Peng, Lambertini, Luca, Stanley, Sarah A., Homann, Dirk, Stewart, Andrew F., Lo, James C., Herman, Mark A., Garcia-Ocaña, Adolfo, and Scott, Donald K.
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- 2022
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18. Maladaptive positive feedback production of ChREBPβ underlies glucotoxic β-cell failure
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Katz, Liora S., Brill, Gabriel, Zhang, Pili, Kumar, Anil, Baumel-Alterzon, Sharon, Honig, Lee B., Gómez-Banoy, Nicolás, Karakose, Esra, Tanase, Marius, Doridot, Ludivine, Alvarsson, Alexandra, Davenport, Bennett, Wang, Peng, Lambertini, Luca, Stanley, Sarah A., Homann, Dirk, Stewart, Andrew F., Lo, James C., Herman, Mark A., Garcia-Ocaña, Adolfo, and Scott, Donald K.
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- 2022
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19. Maternal thyroid function and offspring birth anthropometrics in women with polycystic ovary syndrome
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Trouva, Anastasia, primary, Alvarsson, Michael, additional, Calissendorff, Jan, additional, Åsvold, Bjørn Olav, additional, Ujvari, Dorina, additional, Hirschberg, Angelica Lindén, additional, and Vanky, Eszter, additional
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- 2024
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20. Polycystic ovary syndrome in type 1 diabetes mellitus: a cross-sectional study of 785 women with diabetes and 1152 controls
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Toft, Sofia, primary, Rajamand, Ekberg Neda, additional, Abdulrahim, Hidaya, additional, Linden, Hirschberg Angelica, additional, and Alvarsson, Michael, additional
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- 2024
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21. Structure and Function of Pancreatic Neural Circuitry in Obesity and Diabetes
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Hampton, Rollie, primary, Jimenez-Gonzalez, Maria, additional, Alvarsson, Alexandra, additional, Li, Rosemary, additional, Espinoza, Diego, additional, Carty, Jamie, additional, and Alexeyev, Lucia, additional
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- 2024
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22. The association of antidiabetic medications and Mini-Mental State Examination scores in patients with diabetes and dementia
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Juraj Secnik, Hong Xu, Emilia Schwertner, Niklas Hammar, Michael Alvarsson, Bengt Winblad, Maria Eriksdotter, Sara Garcia-Ptacek, and Dorota Religa
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Diabetes ,Dementia ,Antidiabetics ,Metformin ,DPP-4i ,MMSE ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 ,Neurology. Diseases of the nervous system ,RC346-429 - Abstract
Abstract Background The effect of antidiabetic medication on cognitive function is unclear. We analyzed the association between five antidiabetic drugs and change in Mini-Mental State Examination (MMSE) scores in patients with diabetes and dementia. Methods Using the Swedish Dementia Registry and four supplementary Swedish registers/databases, we identified 1873 patients (4732 observations) with diagnosis of type 2 diabetes (diabetes) and Alzheimer’s disease or mixed-pathology dementia who were followed up at least once after dementia diagnosis. Use of metformin, insulin, sulfonylurea, thiazolidinediones (TZD), and dipeptidyl-peptidase-4 inhibitors (DPP-4i) was identified at baseline. Prevalent-user, incident-user, and drug-drug cohorts were sampled, and propensity-score matching was used to analyze comparable subjects. Beta coefficients with 95% confidence intervals (CI) from the random intercept and slope linear mixed-effects models determined the association between the use of antidiabetic medications and decline in MMSE score points between the follow-ups. Inverse-probability weighting was used to account for patient dropout. Results Compared to non-users, prevalent users of metformin (beta 0.89, 95% CI 0.44; 1.33) and DPP-4i (0.72, 0.06; 1.37) experienced a slower cognitive decline with time. Secondly, compared to DPP-4i, the use of insulin (−1.00, −1.95; −0.04) and sulfonylureas (−1.19; −2.33; −0.04) was associated with larger point-wise decrements in MMSE with annual intervals. Conclusions In this large cohort of patients with diabetes and dementia, the use of metformin and DPP-4i was associated with a slower decline in MMSE scores. Further examination of the cognitive effects of metformin and incretin-based medications is warranted.
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- 2021
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23. Risk factor management of type 2 diabetic patients in primary care in the Scandinavian countries between 2003 and 2015
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Knudsen, Søren Tang, Bodegård, Johan, Birkeland, Kåre I., Furuseth, Kristian, Thuresson, Marcus, Lindh, Anders, Nilsson, Peter M., Alvarsson, Michael, Jørgensen, Marit Eika, Søndergaard, Jens, and Persson, Frederik
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- 2021
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24. Predicting With Confidence: Using Conformal Prediction in Drug Discovery
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Alvarsson, Jonathan, Arvidsson McShane, Staffan, Norinder, Ulf, and Spjuth, Ola
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- 2021
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25. Elvägar eller depåladdning? En studie av en elektrifierad busslinje 4 i Stockholm Stad : En undersökande studie som skildrar induktiv laddning för eldrivna batteribussar under färd i jämförelse med stationär laddning på depå för en elektrifierad kollektivtrafik
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ALVARSSON, JOEL, ENGSTRÖM, HUGO, ALVARSSON, JOEL, and ENGSTRÖM, HUGO
- Abstract
Kollektivtrafiken i Stockholm står inför en stor omställning med övergången till elbussar. För en lyckad omställning krävs ett välplanerat system som inkluderar robusta och kostnadseffektiva laddningstekniker. Denna studie undersöker två laddningstekniker, induktiva elvägar och depåladdning. Den analyserar möjligheter, hinder, och ansvarsstrukturer kopplade till dessa tekniker, med fokus på busslinje 4 där Trafikförvaltningen agerar uppdragsgivare för arbetet. Studien baseras på dokument, litteratur, och intervjuer med intressenter berörda av valet av laddningsteknik. Intervjuerna identifierade spridda åsikter bland aktörerna. De största utmaningarna kopplade till depåladdning var elnätsanslutningar, batterikostnader, och de höga kostnader kopplade till att skala upp för stora bussystem. Fördelarna som identifierades med depåladdningen var främst att det är en etablerad teknik och ett lågt behov av samarbete mellan aktörer. Gällande elvägen ansåg man att de största hindrena var kopplade till höga infrastrukturkostnader, mindre etablerad teknik, och osäkerheter kring ansvarsstrukturen. Fördelarna med tekniken inkluderar reducerade batteribehov, möjligheten att integrera flera användare, och den lägre effekt som krävs av tekniken. Studien analyserar även potentiella ansvarsstrukturer för respektive teknik. Slutsatsen är att dessa poster är beroende av användarna och finansiären av tekniken. Ansvarsstrukturen för depåladdning presenteras såsom den ser ut idag i Stockholm då denna anses vara effektiv. Ansvarsstrukturen för elvägen är beroende av användarna. Några ansvarsområden såsom drift och underhåll är beroende av finansiären. En potentiell finansiär ses som en trafikhuvudman i fallet då den enbart används av kollektivtrafiken, men att andra finansiärer såsom kommuner och privata organisationer är möjliga beroende på öppenheten för ytterligare användare., The public transport system in Stockholm is undergoing a significant transformation by transitioning to electric buses. To accomplish a successful transition, a system incorporating robust and cost effective charging technologies is needed. This study compares two possible charging technologies, namely inductive electric roads and depot charging. The study analyzes the opportunities, challenges, and potential ownership structures associated with these technologies, focusing on bus line 4 with Trafikförvaltningen as the Commissioner. The study is mainly based on documents, literature, and interviews with stakeholders involved in the public transport value chain. The interviews revealed mixed opinions among stakeholders. Identified from interviews, the main challenges associated with depot charging were identified as grid connections, battery costs, and high costs for large bus systems. The identified advantages of depot charging were primarily that it is an established technology and a minimal need for collaboration between stakeholders. For the electric road, the challenges were high initial infrastructure costs, a less established technology, and uncertainties regarding ownership. The identified benefits include reduced battery requirements, the ability to integrate multiple users, and the lower power required from grid connections. The study also analyzes potential ownership structures for each technology. The conclusion is that the ownership structure is dependent on the users and the financier of technology. The ownership structure for depot charging is presented as it is functioning today in Stockholm, as this was deemed effective. The ownership structure for the electric road changes based on the users. Where certain posts such as operations and maintenance is dependent on the financier. In the case where it is only used by public transport, a potential financier is seen as the traffic authority. However other financiers such as the city and private organizat
- Published
- 2024
26. Naval Stores : Kartläggning av handel med hampa 1600-1850
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Alvarsson, Johan and Alvarsson, Johan
- Abstract
This study utilizes data from the Sound Toll Registers Online and Swedish trade statistics to explore whether fluctuations in the national import of raw hemp can be interpreted as indicators of the expansion or decline in ship production in Europe and Sweden during the age of sails between 1600 and 1850. The study furthermore aims to enhances the understanding of the Baltic Sea region's significance in the Naval Stores trade, by providing quantitative data on hemp production and shipments from the area. While the results provide some support for this hypothesis, as the research reveals some examples of a connection between increased hemp volumes passing through the Øresund and shipbuilding activities in Europe and Sweden, further detailed studies of shipyard activities in Sweden and Europe, especially that of roperies, are necessary to elucidate the potential correlation between hemp trade and shipbuilding.
- Published
- 2024
27. Det sociala nätverkets betydelse för barn och ungas psykiska hälsa
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Alvarsson, Anton, Bråstad, Beatrice, Alvarsson, Anton, and Bråstad, Beatrice
- Abstract
The mental health of children and adolescents’ is a debated topic and constitutes a large part of social work in Sweden. The purpose of this study was to investigate how social workers perceive the importance of children and adolescents’ social networks in relation to their mental health and what role social work has in this. The qualitative method used was semi-structured interviews, that was processed through a thematic analysis. The results of this inductive study show that various aspects of the social network are important for the mental wellbeing of children and adolescents’ and that there are differences in how the social workers perceive their role in the child's social network. There are differences in what previous research believes is important for the child and how the social workers' working methods are designed. This study contributes to a deeper understanding of the importance of children and adolescents’ social networks., Barn och ungas psykiska hälsa är ett omdiskuterat ämne och utgör en stor del av det sociala arbetet i Sverige. Syftet med denna studie var att undersöka hur socialsekreterare uppfattar betydelsen av barn och ungas sociala nätverk i relation till deras psykiska hälsa samt vilken roll det sociala arbetet har i detta. Den kvalitativa metoden som har använts var semistrukturerade intervjuer. Intervjuernas innehåll bearbetades sedan genom en tematisk analys. Studien genomfördes med en induktiv ansats. Resultatet visar att det finns olika aspekter av det sociala nätverket som har betydelse för barn och ungas psykiska mående samt att det finns skillnader i hur socialsekreterarna uppfattar sin roll i barnets sociala nätverk. Studien visar att det finns skillnader i vad tidigare forskning menar är viktigt för barnet och hur socialsekreterarnas arbetssätt är utformade. Denna studie bidrar med en fördjupad förståelse för betydelsen av barn och ungas sociala nätverk.
- Published
- 2024
28. CPSign - Conformal Prediction for Cheminformatics Modeling
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McShane, Staffan Arvidsson, Norinder, Ulf, Alvarsson, Jonathan, Ahlberg, Ernst, Carlsson, Lars, Spjuth, Ola, McShane, Staffan Arvidsson, Norinder, Ulf, Alvarsson, Jonathan, Ahlberg, Ernst, Carlsson, Lars, and Spjuth, Ola
- Abstract
Conformal prediction has seen many applications in pharmaceutical science, being able to calibrate outputsof machine learning models and producing valid prediction intervals. We here present the open source softwareCPSign that is a complete implementation of conformal prediction for cheminformatics modeling. CPSign implements inductive and transductive conformal prediction for classifcation and regression, and probabilistic predictionwith the Venn-ABERS methodology. The main chemical representation is signatures but other types of descriptorsare also supported. The main modeling methodology is support vector machines (SVMs), but additional modelingmethods are supported via an extension mechanism, e.g. DeepLearning4J models. We also describe features for visualizing results from conformal models including calibration and efciency plots, as well as features to publish predictive models as REST services. We compare CPSign against other common cheminformatics modeling approachesincluding random forest, and a directed message-passing neural network. The results show that CPSign producesrobust predictive performance with comparative predictive efciency, with superior runtime and lower hardwarerequirements compared to neural network based models. CPSign has been used in several studies and is in production-use in multiple organizations. The ability to work directly with chemical input fles, perform descriptor calculationand modeling with SVM in the conformal prediction framework, with a single software package having a low footprint and fast execution time makes CPSign a convenient and yet fexible package for training, deploying, and predicting on chemical data. CPSign can be downloaded from GitHub at https://github.com/arosbio/cpsign. Scientifc contribution CPSign provides a single software that allows users to perform data preprocessing, modeling and make predictionsdirectly on chemical structures, using conformal and probabilistic prediction. Building and evaluating ne, Originally posted on the preprint server bioRxiv on November 22, 2023.
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- 2024
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29. Differences in endothelial function between patients with Type 1 and Type 2 diabetes: effects of red blood cells and arginase.
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Tengbom, John, Kontidou, Eftychia, Collado, Aida, Jiangning Yang, Alvarsson, Michael, Brinck, Jonas, Rössner, Sophia, Zhichao Zhou, Pernow, John, and Mahdi, Ali
- Subjects
TYPE 2 diabetes ,TYPE 1 diabetes ,ERYTHROCYTES ,ARGINASE ,ENDOTHELIUM diseases - Abstract
The mechanisms underlying endothelial dysfunction in Type 1 and Type 2 diabetes (T1DM and T2DM) are unresolved. The red blood cells (RBCs) with increased arginase activity induce endothelial dysfunction in T2DM, but the implications of RBCs and the role of arginase inhibition in T1DM are unexplored. We aimed to investigate the differences in endothelial function in patients with T1DM and T2DM, with focus on RBCs and arginase. Thirteen patients with T1DM and twenty-six patients with T2DM, matched for HbA1c and sex were included. In vivo endothelium-dependent and -independent vasodilation (EDV and EIDV) were assessed by venous occlusion plethysmography before and after administration of an arginase inhibitor. RBCs were co-incubated with rat aortic segments for 18h followed by evaluation of endothelium-dependent (EDR) and -independent relaxation (EIDR) in isolated organ chambers. In vivo EDV, but not EIDV, was significantly impaired in patients with T2DM compared with patients with T1DM. Arginase inhibition resulted in improved EDV only in T2DM. RBCs from patients with T2DM induced impaired EDR but not EIDR in isolated aortic segments, whereas RBCs from patients with T1DM did not affect EDR nor EIDR. The present study demonstrates markedly impaired EDV in patients with T2DM in comparison with T1DM. In addition, it highlights the divergent roles of RBCs and arginase in mediating endothelial dysfunction in T1DM and T2DM. While endothelial dysfunction is mediated via RBCs and arginase in T2DM, these phenomena are not prominent in T1DM thereby indicating distinct differences in underlying mechanisms. [ABSTRACT FROM AUTHOR]
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- 2024
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30. Harmine and exendin-4 combination therapy safely expands human β cell mass in vivo in a mouse xenograft system.
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Rosselot, Carolina, Li, Yansui, Wang, Peng, Alvarsson, Alexandra, Beliard, Kara, Lu, Geming, Kang, Randy, Li, Rosemary, Liu, Hongtao, Gillespie, Virginia, Tzavaras, Nikolaos, Kumar, Kunal, DeVita, Robert J., Stewart, Andrew F., Stanley, Sarah A., and Garcia-Ocaña, Adolfo
- Subjects
GLUCAGON-like peptide 1 ,TERMINATION of treatment ,PEOPLE with diabetes ,THREE-dimensional imaging ,ISLANDS of Langerhans - Abstract
Five hundred thirty-seven million people globally suffer from diabetes. Insulin-producing β cells are reduced in number in most people with diabetes, but most individuals still have some residual β cells. However, none of the many diabetes drugs in common use increases human β cell numbers. Recently, small molecules that inhibit dual tyrosine-regulated kinase 1A (DYRK1A) have been shown to induce immunohistochemical markers of human β cell replication, and this is enhanced by drugs that stimulate the glucagon-like peptide 1 (GLP1) receptor (GLP1R) on β cells. However, it remains to be demonstrated whether these immunohistochemical findings translate into an actual increase in human β cell numbers in vivo. It is also unknown whether DYRK1A inhibitors together with GLP1R agonists (GLP1RAs) affect human β cell survival. Here, using an optimized immunolabeling-enabled three-dimensional imaging of solvent-cleared organs (iDISCO
+ ) protocol in mouse kidneys bearing human islet grafts, we demonstrate that combination of a DYRK1A inhibitor with exendin-4 increases actual human β cell mass in vivo by a mean of four- to sevenfold in diabetic and nondiabetic mice over 3 months and reverses diabetes, without alteration in human α cell mass. The augmentation in human β cell mass occurred through mechanisms that included enhanced human β cell proliferation, function, and survival. The increase in human β cell survival was mediated, in part, by the islet prohormone VGF. Together, these findings demonstrate the therapeutic potential and favorable preclinical safety profile of the DYRK1A inhibitor–GLP1RA combination for diabetes treatment. Editor's summary: Diabetes results from insufficient β cell function and, to differing degrees, insufficient β cell mass. There are, however, no currently approved treatments to increase β cell numbers. Combined DYRK1A kinase inhibition and GLP1 receptor (GLP1R) agonism has previously been shown to induce replication of β cells in human pancreatic islets ex vivo. Here, Rosselot et al. show that combined treatment with a DYRK1A inhibitor and GLP1R agonist in vivo promoted substantial increases in human β cell mass transplanted into immunodeficient mice. Three months of combination treatment restored glucose homeostasis in a streptozotocin-induced model of diabetes, with effects lasting for at least a month after treatment withdrawal. Initial analysis suggested that these effects occurred through altered β cell proliferation, function, and survival. Although promising, further work will be needed to confirm the mechanisms of action and whether the therapeutic benefits and safety of the approach would translate to humans. —Catherine Charneski [ABSTRACT FROM AUTHOR]- Published
- 2024
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31. Amygdala-liver signaling orchestrates rapid glycemic responses to stress and drives stress-induced metabolic dysfunction
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Stanley, Sarah, primary, Devarakonda, Kavya, additional, O'Connor, Richard, additional, Jimenez-Gonzalez, Maria, additional, Alvarsson, Alexandra, additional, Hampton, Rollie, additional, Espinoza, Diego, additional, Li, Rosemary, additional, Shtekler, Abigail, additional, Conner, Kaetlyn, additional, Bayne, Mitchell, additional, Garibay, Darline, additional, Martin, Jessie, additional, Lehmann, Vanessa, additional, Wang, Liheng, additional, and Kenny, Paul, additional
- Published
- 2024
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32. Predicting target profiles with confidence as a service using docking scores
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Laeeq Ahmed, Hiba Alogheli, Staffan Arvidsson McShane, Jonathan Alvarsson, Arvid Berg, Anders Larsson, Wesley Schaal, Erwin Laure, and Ola Spjuth
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Predicted target profiles ,Virtual screening ,Drug discovery ,Conformal prediction ,AutoDock Vina ,Apache Spark ,Information technology ,T58.5-58.64 ,Chemistry ,QD1-999 - Abstract
Abstract Background Identifying and assessing ligand-target binding is a core component in early drug discovery as one or more unwanted interactions may be associated with safety issues. Contributions We present an open-source, extendable web service for predicting target profiles with confidence using machine learning for a panel of 7 targets, where models are trained on molecular docking scores from a large virtual library. The method uses conformal prediction to produce valid measures of prediction efficiency for a particular confidence level. The service also offers the possibility to dock chemical structures to the panel of targets with QuickVina on individual compound basis. Results The docking procedure and resulting models were validated by docking well-known inhibitors for each of the 7 targets using QuickVina. The model predictions showed comparable performance to molecular docking scores against an external validation set. The implementation as publicly available microservices on Kubernetes ensures resilience, scalability, and extensibility.
- Published
- 2020
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33. Thyroid Status During Pregnancy in Women With Polycystic Ovary Syndrome and the Effect of Metformin
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Anastasia Trouva, Michael Alvarsson, Jan Calissendorff, Bjørn Olav Åsvold, Eszter Vanky, and Angelica Lindén Hirschberg
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hypothyroidism ,PCOS (polycystic ovarian syndrome) ,pregnancy ,pregnancy outcome ,metformin ,Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
ObjectivePolycystic ovary syndrome (PCOS) and hypothyroidism are related conditions, and both are associated with adverse pregnancy outcomes. Knowledge is lacking about the complex interaction between thyroid status and PCOS during pregnancy. We investigated the thyroid status and its association with pregnancy complications in PCOS, and in relation to metformin treatment.DesignPost-hoc analyses of two randomized, double-blind, placebo-controlled trials.Methods288 pregnant women with PCOS were randomized to treatment with metformin or placebo from first trimester to delivery. We measured serum levels of thyroid stimulating hormone (TSH) and free thyroxine (fT4) at gestational week (gw) 5-12, 19, 32 and 36 and related to metformin treatment and pregnancy complications. Thyroid peroxidase antibodies (TPO-ab) were analyzed at inclusion and at gw 36.ResultsThe overall prevalence of subclinical and overt hypothyroidism was 1.5% and 0%, respectively. The TSH level was not affected by metformin, whereas fT4 was significantly higher in the metformin group with less decrease throughout pregnancy compared to placebo, p
- Published
- 2022
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34. Televangelism in Sweden—Now? Is Channel 10 in Älmhult in Fact a Telechurch?
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Alvarsson, Jan-Åke, Lewis, James R., Series editor, Bogdan, Henrik, Series editor, Moberg, Jessica, editor, and Skjoldli, Jane, editor
- Published
- 2018
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35. The association of antidiabetic medications and Mini-Mental State Examination scores in patients with diabetes and dementia
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Secnik, Juraj, Xu, Hong, Schwertner, Emilia, Hammar, Niklas, Alvarsson, Michael, Winblad, Bengt, Eriksdotter, Maria, Garcia-Ptacek, Sara, and Religa, Dorota
- Published
- 2021
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36. SciPipe - Turning Scientific Workflows into Computer Programs.
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Samuel Lampa, Martin Dahlö, Jonathan Alvarsson, and Ola Spjuth
- Published
- 2019
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37. Optical Clearing and 3D Analysis Optimized for Mouse and Human Pancreata
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Alexandra Alvarsson, Maria Jimenez-Gonzalez, Rosemary Li, Carolina Rosselot, Nikolaos Tzavaras, Zhuhao Wu, and Sarah Stanley
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Biology (General) ,QH301-705.5 - Abstract
The pancreas is a heavily innervated organ, but pancreatic innervation can be challenging to comprehensively assess using conventional histological methods. However, recent advances in whole-mount tissue clearing and 3D rendering techniques have allowed detailed reconstructions of pancreatic innervation. Optical clearing is used to enhance tissue transparency and reduce light scattering, thus eliminating the need to section the tissue. Here, we describe a modified version of the optical tissue clearing protocol iDISCO+ (immunolabeling-enabled three-dimensional imaging of solvent-cleared organs) optimized for pancreatic innervation and endocrine markers. The protocol takes 13-19 days, depending on tissue size. In addition, we include protocols for imaging using light sheet and confocal microscopes and for 3D segmentation of pancreatic innervation and endocrine cells using Imaris.
- Published
- 2021
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38. CPSign - Conformal Prediction for Cheminformatics Modeling
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McShane, Staffan Arvidsson, primary, Norinder, Ulf, additional, Alvarsson, Jonathan, additional, Ahlberg, Ernst, additional, Carlsson, Lars, additional, and Spjuth, Ola, additional
- Published
- 2023
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39. Stimulation of soluble guanylyl cyclase in erythrocytes induces export of cGMP and cardioprotection in type 2 diabetes
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Jiao, T, primary, Collado, A, additional, Mahdi, A, additional, Tengbom, J, additional, Tratsiakovich, Y, additional, Milne, G, additional, Alvarsson, M, additional, Lundberg, J, additional, Zhou, Z, additional, Yang, J, additional, and Pernow, J, additional
- Published
- 2023
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40. 1509-H Quantitative assessment of the tumor microenvironment using the Aurora™ 3D Spatial Biology Platform
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Stoltzfus, Caleb, primary, Alvarsson, Alexandra, additional, DeWitt, Anna, additional, Wilson, Jasmine, additional, Grant, Nathan, additional, Simmons, David, additional, Olin, Brandy, additional, Phillips, Bonnie, additional, Dillon, Laura A, additional, Clifton, Guy Travis, additional, and Reder, Nicholas, additional
- Published
- 2023
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41. Erythrocytes From Patients With Type 2 Diabetes Induce Endothelial Dysfunction Via Arginase I
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Zhou, Zhichao, Mahdi, Ali, Tratsiakovich, Yahor, Zahorán, Szabolcs, Kövamees, Oskar, Nordin, Filip, Uribe Gonzalez, Arturo Eduardo, Alvarsson, Michael, Östenson, Claes-Göran, Andersson, Daniel C, Hedin, Ulf, Hermesz, Edit, Lundberg, Jon O, Yang, Jiangning, and Pernow, John
- Published
- 2018
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42. Red Blood Cells in Type 2 Diabetes Impair Cardiac Post-Ischemic Recovery Through an Arginase-Dependent Modulation of Nitric Oxide Synthase and Reactive Oxygen Species
- Author
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Yang, Jiangning, Zheng, Xiaowei, Mahdi, Ali, Zhou, Zhichao, Tratsiakovich, Yahor, Jiao, Tong, Kiss, Attila, Kövamees, Oskar, Alvarsson, Michael, Catrina, Sergiu-Bogdan, Lundberg, Jon O., Brismar, Kerstin, and Pernow, John
- Published
- 2018
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43. Evaluating parameters for ligand-based modeling with random forest on sparse data sets.
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Alexander Kensert, Jonathan Alvarsson, Ulf Norinder, and Ola Spjuth
- Published
- 2018
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44. A confidence predictor for logD using conformal regression and a support-vector machine.
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Maris Lapins, Staffan Arvidsson, Samuel Lampa, Arvid Berg, Wesley Schaal, Jonathan Alvarsson, and Ola Spjuth
- Published
- 2018
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45. Erythrocytes Induce Endothelial Injury in Type 2 Diabetes Through Alteration of Vascular Purinergic Signaling
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Ali Mahdi, Yahor Tratsiakovich, John Tengbom, Tong Jiao, Lara Garib, Michael Alvarsson, Jiangning Yang, John Pernow, and Zhichao Zhou
- Subjects
erythrocyte ,endothelial dysfunction ,diabetes ,purinergic receptor ,adenosine triphosphate ,adenosine ,Therapeutics. Pharmacology ,RM1-950 - Abstract
It is well established that altered purinergic signaling contributes to vascular dysfunction in type 2 diabetes (T2D). Red blood cells (RBCs) serve as an important pool for circulating ATP and the release of ATP from RBCs in response to physiological stimuli is impaired in T2D. We recently demonstrated that RBCs from patients with T2D (T2D RBC) serve as key mediators of endothelial dysfunction. However, it remains unknown whether altered vascular purinergic signaling is involved in the endothelial dysfunction induced by dysfunctional RBCs in T2D. Here, we evaluated acetylcholine-induced endothelium-dependent relaxation (EDR) of isolated rat aortas after 18 h ex vivo co-incubation with human RBCs, and aortas of healthy recipient rats 4 h after in vivo transfusion with RBCs from T2D Goto-Kakizaki (GK) rats. Purinergic receptor (PR) antagonists were applied in isolated aortas to study the involvement of PRs. EDR was impaired in aortas incubated with T2D RBC but not with RBCs from healthy subjects ex vivo, and in aortas of healthy rats after transfusion with GK RBCs in vivo. The impairment in EDR by T2D RBC was attenuated by non-selective P1R and P2R antagonism, and specific A1R, P2X7R but not P2Y6R antagonism. Transfusion with GK RBCs in vivo impaired EDR in aortas of recipient rats, an effect that was attenuated by A1R, P2X7R but not P2Y6R antagonism. In conclusion, RBCs induce endothelial dysfunction in T2D via vascular A1R and P2X7R but not P2Y6R. Targeting vascular purinergic singling may serve as a potential therapy to prevent endothelial dysfunction induced by RBCs in T2D.
- Published
- 2020
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46. Repeated hypoglycemia remodels neural inputs and disrupts mitochondrial function to blunt glucose-inhibited GHRH neuron responsiveness
- Author
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Mitchell Bayne, Alexandra Alvarsson, Kavya Devarakonda, Rosemary Li, Maria Jimenez-Gonzalez, Darline Garibay, Kaetlyn Conner, Merina Varghese, Madhavika N. Serasinghe, Jerry E. Chipuk, Patrick R. Hof, and Sarah A. Stanley
- Subjects
Metabolism ,Neuroscience ,Medicine - Abstract
Hypoglycemia is a frequent complication of diabetes, limiting therapy and increasing morbidity and mortality. With recurrent hypoglycemia, the counterregulatory response (CRR) to decreased blood glucose is blunted, resulting in hypoglycemia-associated autonomic failure (HAAF). The mechanisms leading to these blunted effects are only poorly understood. Here, we report, with ISH, IHC, and the tissue-clearing capability of iDISCO+, that growth hormone releasing hormone (GHRH) neurons represent a unique population of arcuate nucleus neurons activated by glucose deprivation in vivo. Repeated glucose deprivation reduces GHRH neuron activation and remodels excitatory and inhibitory inputs to GHRH neurons. We show that low glucose sensing is coupled to GHRH neuron depolarization, decreased ATP production, and mitochondrial fusion. Repeated hypoglycemia attenuates these responses during low glucose. By maintaining mitochondrial length with the small molecule mitochondrial division inhibitor-1, we preserved hypoglycemia sensitivity in vitro and in vivo. Our findings present possible mechanisms for the blunting of the CRR, significantly broaden our understanding of the structure of GHRH neurons, and reveal that mitochondrial dynamics play an important role in HAAF. We conclude that interventions targeting mitochondrial fission in GHRH neurons may offer a new pathway to prevent HAAF in patients with diabetes.
- Published
- 2020
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47. Cholinesterase inhibitors in patients with diabetes mellitus and dementia: an open-cohort study of ~23 000 patients from the Swedish Dementia Registry
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Bengt Winblad, Juraj Secnik, Emilia Schwertner, Michael Alvarsson, Sara Garcia-Ptacek, Dorota Religa, and Maria Eriksdotter
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Diseases of the endocrine glands. Clinical endocrinology ,RC648-665 - Abstract
ObjectiveCholinesterase inhibitors (ChEIs) and memantine are the only approved pharmacological treatments for Alzheimer’s disease (AD). Recent literature suggests reductions in cardiovascular burden and risk of stroke in ChEI users. However, the clinical effectiveness of these drugs in patients with diabetes mellitus (DM) and dementia has not been evaluated.Research design and methodsWe conducted a registry-based open-cohort study of 22 660 patients diagnosed with AD and mixed-pathology dementia registered in the Swedish Dementia Registry until December 2015. Information on drug use, comorbidity and mortality was extracted using the linkage with the National Patient Registry, the Prescribed Drug Registry and the Cause of Death Registry. In total, 3176 (14%) patients with DM and 19 484 patients without DM were identified. Propensity-score matching, Cox-regression and competing-risk regression models were applied to produce HRs with 95% CIs for differences in all-cause, cardiovascular and diabetes-related mortality rates in ChEI users and non-users.ResultsAfter matching the ChEI use in patients with DM was associated with 24% all-cause mortality reduction (HR 0.76 (95% CI 0.67 to 0.86)), compared with 20% reduction (0.80 (0.75 to 0.84)) in non-DM users. Donepezil and galantamine use were associated with a reduced mortality in both patients with DM (0.84 (0.74 to 0.96); 0.80 (0.66 to 0.97)) and patients without DM (0.85 (0.80 to 0.90); 0.93 (0.86 to 0.99)). Donepezil was further associated with reduction in cardiovascular mortality, however only in patients without DM (0.84 (0.75 to 0.94)). Rivastigmine lowered mortality only in the whole-cohort analysis and in patients without DM (0.82 (0.75 to 0.89)). Moreover, ChEI use was associated with 48% reduction in diabetes-related mortality (HR 0.52 (0.32 to 0.87)) in the whole-cohort analysis. Last, low and high doses were associated with similar benefit.ConclusionsWe found reductions in mortality in patients with DM and AD or mixed-pathology dementia treated with ChEIs, specifically donepezil and galantamine were associated with largest benefit. Future studies should evaluate whether ChEIs help maintain self-management of diabetes in patients with dementia.
- Published
- 2020
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48. Predictors of the Use of a Mental Health–Focused eHealth System in Patients With Breast and Prostate Cancer: Bayesian Structural Equation Modeling Analysis of a Prospective Study
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Petros, Nuhamin Gebrewold, primary, Alvarsson-Hjort, Jesper, additional, Hadlaczky, Gergö, additional, Wasserman, Danuta, additional, Ottaviano, Manuel, additional, Gonzalez-Martinez, Sergio, additional, Carletto, Sara, additional, Scilingo, Enzo Pasquale, additional, Valenza, Gaetano, additional, and Carli, Vladimir, additional
- Published
- 2023
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49. Predicting target profiles with confidence as a service using docking scores
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Ahmed, Laeeq, Alogheli, Hiba, McShane, Staffan Arvidsson, Alvarsson, Jonathan, Berg, Arvid, Larsson, Anders, Schaal, Wesley, Laure, Erwin, and Spjuth, Ola
- Published
- 2020
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50. In Silico Prediction of Human Clinical Pharmacokinetics with ANDROMEDA by Prosilico: Predictions for an Established Benchmarking Data Set, a Modern Small Drug Data Set, and a Comparison with Laboratory Methods
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Urban Fagerholm, Sven Hellberg, Jonathan Alvarsson, and Ola Spjuth
- Subjects
Medical Laboratory Technology ,General Medicine ,Toxicology ,General Biochemistry, Genetics and Molecular Biology - Abstract
There is an ongoing aim to replace animal and in vitro laboratory models with in silico methods. Such replacement requires the successful validation and comparably good performance of the alternative methods. We have developed an in silico prediction system for human clinical pharmacokinetics, based on machine learning, conformal prediction and a new physiologically-based pharmacokinetic model, i.e. ANDROMEDA. The objectives of this study were: a) to evaluate how well ANDROMEDA predicts the human clinical pharmacokinetics of a previously proposed benchmarking data set comprising 24 physicochemically diverse drugs and 28 small drug molecules new to the market in 2021; b) to compare its predictive performance with that of laboratory methods; and c) to investigate and describe the pharmacokinetic characteristics of the modern drugs. Median and maximum prediction errors for the selected major parameters were ca 1.2 to 2.5-fold and 16-fold for both data sets, respectively. Prediction accuracy was on par with, or better than, the best laboratory-based prediction methods (superior performance for a vast majority of the comparisons), and the prediction range was considerably broader. The modern drugs have higher average molecular weight than those in the benchmarking set from 15 years earlier ( ca 200 g/mol higher), and were predicted to (generally) have relatively complex pharmacokinetics, including permeability and dissolution limitations and significant renal, biliary and/or gut-wall elimination. In conclusion, the results were overall better than those obtained with laboratory methods, and thus serve to further validate the ANDROMEDA in silico system for the prediction of human clinical pharmacokinetics of modern and physicochemically diverse drugs.
- Published
- 2022
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