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Abstract Although Synsepalum dulcificum is viewed as one of the most economically promising orphan tree crops worldwide, its genetic improvement and sustainable conservation are hindered by a lack of understanding of its evolutionary history and current population structure. Here, we report for the first time the application of genome‐wide single nucleotide polymorphism genotyping to a diverse panel of S. dulcificum accessions to depict the genetic diversity and population structure of the species in the Dahomey Gap (DG) and Upper Guinea (UG) regions to infer its evolutionary history. Our findings suggest low overall genetic diversity but strong population divergence within the species. Neighbor‐joining analysis detected two genetic groups in the UG and DG regions, while STRUCTURE distinguished three genetic groups, corresponding to the UG, Western DG, and Central DG regions. Application of Monmonier's algorithm revealed the existence of a barrier disrupting connectivity between the UG and DG groups. The Western DG group consistently exhibited the highest levels of nucleotide and haplotype diversities, while that of the Central DG exhibited the lowest. Analyses of Tajima's D, Fu's Fs, and Achaz Y* statistics suggest that while both UG and Central DG groups likely experienced recent expansions, the Western DG group is at equilibrium. These findings suggest a geographical structuring of genetic variation which supports the conclusion of differential evolutionary histories among West African groups of S. dulcificum. These results provide foundational insights to guide informed breeding population development and design sustainable conservation strategies for this species.

Understanding the genetic variability within a plant species is paramount in implementing a successful breeding program. Spider plant (Gynandropsis gynandra) is an orphan leafy vegetable and an extraordinary source of vitamins, secondary metabolites and minerals, representing an important resource for combatting malnutrition. However, an evaluation of the leaf elemental composition, using a worldwide germplasm collection to inform breeding programs and the species valorization in human nutrition is still lacking. The present study aimed to profile the leaf elemental composition of G. gynandra and depict any potential geographical signature using a collection of 70 advanced lines derived from accessions originating from Asia and Eastern, Southern and West Africa. The collection was grown in a greenhouse using a 9 × 8 alpha lattice design with two replications in 2020 and 2021. Inductively coupled plasma–optical emission spectrometry was used to profile nine minerals contents. A significant difference (p < 0.05) was observed among the lines for all nine minerals. Microelements such as iron, zinc, copper and manganese contents ranged from 12.59–430.72, 16.98–166.58, 19.04–955.71, 5.39–25.10 mg kg−1 dry weight, respectively, while the concentrations of macroelements such as potassium, calcium, phosphorus and magnesium varied in the ranges of 9992.27–49854.23, 8252.80–33681.21, 3633.55–14216.16, 2068.03–12475.60 mg kg−1 dry weight, respectively. Significant and positive correlations were observed between iron and zinc and calcium and magnesium. Zinc, calcium, phosphorus, copper, magnesium, and manganese represented landmark elements in the genotypes. Eastern and Southern African genotypes were clustered together in group 1 with higher phosphorus, copper and zinc contents than Asian and West African lines, which clustered in group 2 and were characterized by higher calcium, magnesium and manganese contents. An additional outstanding group 3 of six genotypes was identified with high iron, zinc, magnesium, manganese and calcium contents and potential candidates for cultivar release. The genotype × year interaction variance was greater than the genotypic variance, which might translate to phenotypic plasticity in the species. Broad-sense heritability ranged from low to high and was element-specific. The present results reveal the leaf minerals diversity in spider plant and represent a baseline for implementing a minerals-based breeding program for human nutrition.

Abstract Background Understanding end-users’ preferred breeding traits and plant management practices is fundamental in defining sound breeding objectives and implementing a successful plant improvement programme. Since such knowledge is lacking for Synsepalum dulcificum, a worldwide promising orphan fruit tree species, we assessed the interrelationships among socio-demography, ecology, management practices, diversity and ranking of desired breeding traits by end-users of the species (farmers, final consumers and processing companies) in West Africa. Methods Semi-structured interviews, field-visits and focus groups were combined to interview a total of 300 farmers and final consumers belonging to six sociolinguistic groups sampled from three ecological zones of Benin and Ghana. One processing company in Ghana was also involved. Data collected included socio-demographic characteristics; crop management systems and practices; and preferences of farmers, final consumers and processing companies and ranking of breeding traits. Data were analysed using descriptive statistics, independence, and non-parametric tests, generalized linear models, multi-group similarity index and Kendall’s concordance coefficient. Results Men (86.33% of respondents) were the main holders of S. dulcificum in the study area. The three most frequent management practices observed in the species included weeding, fertilization and pruning, which were applied by 75.66%, 27.33% and 16.66% of respondents, respectively. The management intensity index varied significantly across ecological zones, sociolinguistic groups, and instruction level (p < 0.001) but was not affected by gender (p > 0.05). General multigroup similarity indices ( C S T $$ {\mathrm{C}}_{\mathrm{S}}^{\mathrm{T}} $$ ) for farmer-desired traits, on one hand, and final consumer-desired traits, on the other hand, were high across ecological zones ( C S T $$ {\mathrm{C}}_{\mathrm{S}}^{\mathrm{T}} $$ ≥ 0.84) and sociolinguistic groups ( C S T $$ {\mathrm{C}}_{\mathrm{S}}^{\mathrm{T}} $$ > 0.83). Nevertheless, respondents from the Guineo-Congolian (Benin) and the Deciduous forest (Ghana) zones expressed higher agreement in the ranking of desired breeding traits. Preference for breeding traits was 60% similar among farmers, final consumers, and processors. The key breeding traits desired by these end-users included in descending order of importance big fruit size, early fruiting, high fruit yielding (for farmers); big fruit size, high fruit miraculin content, fruit freshness (for final consumers); and high fruit miraculin content, big fruit size, high fruit edible ratio (for processing companies). Conclusion This study revealed stronger variations in current management practices across ecological zones than across sociolinguistic groups. A high similarity was shown in end-users’ preferences for breeding traits across the study area. Top key traits to consider in breeding varieties of S. dulcificum to meet various end-users’ expectations in West Africa include fruit size and fruit miraculin content. These results constitute a strong signal for a region-wide promotion of the resource.

The study evaluated the physical and chemical characteristics of vermicompost mixtures to optimize nutrient extraction. Three compost mixtures (chicken plus horse (CH+H), chicken plus cattle (CH+C), and cattle plus horse (C+H)) were selected for quality evaluation at three extraction times: 24, 48, and 72 h. The results showed differences (p < 0.05) in nutrient concentration of compost teas in different compost mixtures. The interaction between treatments and extraction time showed a significant effect (p < 0.05) on nutrients except in P, K, Ca, and EC. The nutrients were higher at 48 h after extraction. The pH was observed to increase slightly with extraction time. C+H had more percentage of moisture content (44.79%) than other mixtures. This mixture was the most preferred by worms, i.e., it had the greater size and number of worms. The results suggested that the presence of oxygen in extraction and high temperatures affects ammonium availability in compost tea as they trigger nitrifying bacteria. Due to the decrease in some nutrients’ concentration (NO3, P, K, Ca, Mg, Mn, and Cu) at 72 h, it was concluded that 48 h is the best time to extract nutrients from compost mixtures to produce good quality compost using aerobic extraction method.

The selection response of wheat (Triticum aestivum L.) under water-limited condition can be enhanced through breeding novel genotypes possessing drought-adaptive and yield-related agronomic and physiological traits. The objective of this study was to evaluate terminal drought tolerance among bread wheat genotypes and select superior parents for breeding. Agronomic and physiological responses of 28 wheat lines were assessed under well-watered (WW) and terminal drought (TD) treatments using a 7 × 4 alpha-lattice design under rainout shelter (RS) and glasshouse (GH) environments. Significant (p ≤ 0.05) genotype × environment interaction effects were observed for number of days to heading (DTH), number of days to maturity (DTM), number of productive tillers per plant (TN), grain yield (GY), thousand kernel weight (TKW), stomatal conductance (SC), leaf canopy temperature (LCT) and chlorophyll content index (CCI) suggesting varied genotypic response under WW and TD treatments. Correlation analysis revealed significant associations TN and GY (r = 0.67; p ≤ 0.001), TKW and GY (r = 0.72; p ≤ 0.001), CCI and GY (r = 0.39; p ≤ 0.05) under TD treatment. Drought tolerant wheat genotypes such as LM100, LM72, LM22 and LM95 are useful for direct cultivation and for developing breeding populations with enhanced yield performance.

Abstract Background Spider plant [Gynandropsis gynandra (L.) Briq.], an economically promising African leafy vegetable, characterized for leaf yield components and nutritive quality, exhibits poor seed germination that hinders a wider expansion of the crop in urban and periurban horticultural systems. So far, there is little information pertaining to seed morphological traits and mineral elements content that may be associated with higher seed germination. This research investigated the hypothesis that spider plants from different geographical areas exhibited differences in seed mineral composition, morphological traits, and germination capacity. To this end, twenty-nine accessions of Gynandropsis gynandra from West and East-Southern Africa, and Asia were screened for variation in seed size (area, perimeter, length, width), 10-seed weight, mean germination time, germination percentage and mineral content variations. The scanning electron microscopy (SEM), light microscopy and energy dispersive spectroscopy (EDS) solution were used to study seed morphology and mineral composition. Results We show for the first time the external and internal structure of the seeds of Gynandropsis gynandra and measured eight mineral elements, including carbon (C), oxygen (O), magnesium (Mg), aluminium (Al), phosphorus (P), sulphur (S), potassium (K) and calcium (Ca). The accessions differed significantly (p

Gynandropsis gynandra (spider plant) is an African traditional leafy vegetable rich in minerals, vitamins and health-promoting compounds with potential for health promotion, micronutrients supplementation and income generation for stakeholders, including pharmaceutical companies. However, information on biomass productivity is limited and consequently constrains breeders’ ability to select high-yielding genotypes and end-users to make decisions on suitable cultivation and production systems. This study aimed to assess the phenotypic variability in biomass and related traits in a collection of G. gynandra advanced lines to select elite genotypes for improved cultivar development. Seventy-one advanced lines selected from accessions originating from Asia, West Africa, East Africa and Southern Africa were evaluated over two years with two replicates in a greenhouse using a 9 x 8 alpha lattice design. Significant statistical differences were observed among lines and genotype origins for all fourteen biomass and related traits. The results revealed three clusters, with each cluster dominated by lines derived from accessions from Asia (Cluster 1), West Africa (Cluster 2), and East/Southern Africa (Cluster 3). The West African and East/Southern African groups were comparable in biomass productivity and superior to the Asian group. Specifically, the West African group had a low number of long primary branches, high dry matter content and flowered early. The East/Southern African group was characterized by broad leaves, late flowering, a high number of short primary branches and medium dry matter content and was a candidate for cultivar release. The maintenance of lines’ membership to their group of origin strengthens the hypothesis of geographical signature in cleome diversity and genetic driver of the observed variation. High genetic variance, broad-sense heritability and genetic gains showed the potential to improve biomass yield and related traits. Significant and positive correlations among biomass per plant, plant height, stem diameter and leaf size showed the potential of simultaneous and direct selection for farmers’ desired traits. The present results provide insights into the diversity of spider plant genotypes for biomass productivity and represent key resources for further improvement in the species.

Maize mutants with low phytic acid have a compromised overall agronomic performance that results in low yields. This study was conducted to investigate the effect of P (18, 26 and 34 mg/kg) on the agronomic performance of low and high phytic acid (LPA and HPA) maize synthetic populations of tropical origin, compared to two commercial hybrids (SC701 and LS8520). Subsequently, a germination test was performed on the seeds produced from the different levels of P fertilizer application rates. The germination test was conducted in the laboratory, using a germination paper towel, while the agronomic study was conducted in a controlled environment. The measured parameters included days to 50% flowering, plant height, and grain yield, as well as the final germination and germination velocity index. The results found that the grain yield increased by 1.30, 0.51, 2.41 and 1.87 t/ha in LPA, HPA, SC701 and LS8520, from the application of 18–26 mg/kg of P, respectively. However, there were non-significant differences (p > 0.05) in the grain yields of all varieties at a P application of 26 and 34 mg/kg. The final germination increased by 4% and 2% in LPA and LS8520, respectively, with the increase in the P application rate being from 18 to 26 mg/kg. However, no significant differences (p > 0.05) were found in the final germination percentage of all varieties at 26 mg/kg of P. This study indicated that the optimum application of P at planting enhances the overall performance of the LPA maize synthetic population to a level that is comparable to commercially-grown varieties.

The selection of relatively high and stable yielding genotypes is key in wheat breeding programs to improve yield performance under heat and drought-stressed environments. This study determined grain yield response and stability among elite heat and drought tolerant bread wheat genotypes under simulated drought-stressed (DS) and non-stressed (NS) environments to select promising parents for breeding. Twenty-four elite bread wheat genotypes selected from the International Maize and Wheat Improvement Centre (CIMMYT) drought and heat tolerant nursery were assessed under NS and DS conditions using a 7 × 4 alpha-lattice design under rainout shelter (RS) and glasshouse (GH) environments. Grain yield data was subjected to analysis of variance (ANOVA), the additive main effect and multiplicative interaction (AMMI) and genotype and genotype-by-environment (GGE) biplot analyses. ANOVA and AMMI revealed highly significant (p ≤ 0.001) differences among test genotypes (G), environments (E) and G × E interaction effects suggesting differential responses for selection. The GGE biplot explained 83.76% of total variation and aided in selection of high-yielding and stable heat and drought tolerant wheat genotypes such as LM13, LM22, LM95 and LM100. These selections are recommended for breeding for yield gains under heat and drought-stressed environments.

Genetic improvement of wheat for drought tolerance can be achieved by developing suitable ideotypes with enhanced yield-response associated with agronomic traits and biochemical markers. The objective of this study was to determine drought response of elite drought tolerant wheat genotypes using agronomic and biochemical traits to select promising lines for breeding. Fourteen wheat genotypes selected from the International Maize and Wheat Improvement Center’s heat and drought tolerance nursery and one standard check variety were evaluated under drought-stressed (DS) and non-stressed (NS) conditions using a randomised complete block design in three replications. Significant (P

Water shortages is a major constraint in wheat production in South Africa. It is important therefore to assist irrigated wheat farmers to identify water stress tolerant growth stages in irrigated wheat genotypes. This study evaluated new wheat genotypes for water stress at different growth stages. An 8 (genotypes) × 2 (water treatments) × 3 (growth stages) factorial experiment was laid out in a randomised complete block design with three replicates. The results indicated that plant height was not affected (p > .05) by water stress at tillering and grain filling. Water stress imposed at the tillering stage reduced the number of fertile tillers (p < .05) in susceptible genotypes while at the flowering and grain filling stages all genotypes were tolerant (p > .05). Aboveground biomass was only affected (p < .05) by water stress imposed at the tillering stage. Water stress reduced grain yield on the genotypes where stress was imposed at the tillering stage (p < .05); whereas when stress was imposed at flowering and grain filling the grain yield was not reduced (p > .05). This study provided evidence to suggest that most genotypes were tolerant to water stress at the flowering and grain filling stages.

The recent drought in South Africa has reduced the production of both dryland and irrigated wheat. This study evaluated physiological traits of irrigated wheat genotypes in response to water stress (WS) imposed at different growth stages. A 8 × 2 × 3 [(genotypes) × (water treatmets; stresses and non-stressed) × (growth stages; tillering, flowering and grain filling)] factorial experiment based on a randomised complete block design with three replicates was conducetd. In general, the rate of photosynthesis was unaffected by WS except for genotypes LM43 at tillering and LM98 at grain filling. Stomatal conductance (SC) and transpiration rate (Tr) followed the same treand except for genotype LM35 which reduced its SC and Tr significantly at grain filling. Instantaneous waster use efficiency (IWUE) of genotype LM35 and LM57 was unaffected (p > 0.05) by WS at tillering but at flowering stage it was affected. However, at grain filling IWUE was affected (p

The decentralised wastewater treatment system (DEWATS) is an onsite sanitation technology that can be used in areas away from municipal sewerage networks. The discharge of effluent emanating from DEWATS into water bodies may cause pollution. Agricultural use of the effluent may improve crop yields and quality thereby contributing to food security in low-income communities. There are drawbacks to the agricultural use of treated wastewater. Therefore, the study assessed the crop, environmental and health risks when irrigating with anaerobic filter (AF) effluent using the Decision Support System (DSS) of the South African Water Quality Guideline model, in four South African agroecological regions, three soil types, two irrigation systems and three different crops. The model was parameterised using AF effluent characterisation data and simulated for 45 years. The model predicted that there are no negative impacts for using AF effluent on soil quality parameters (root zone salinity, soil permeability and oxidisable carbon loading), leaf scorching and irrigation equipment. The problems were reported for nutrient loading (N and P) in maize and microbial contamination in cabbage and lettuce. It was recommended that the effluent should be diluted when used for maize production and advanced treatment should be explored to allow unrestricted agricultural use.

Roots are key organs for water and nutrient acquisition and transport. Therefore, root phenes that are associated with adaptation to low phosphorus (P) environments could enhance top-soil exploration, while deeper allocation is important for acquiring water and mobile nutrients. The understanding of interactions among root phenes can help in the development of common bean (Phaseolus vulgaris L.) genotypes adapted to drought and low fertility through genetic improvement. Two experiments (pot and field) were conducted at the Agricultural Research Institute of Mozambique to assess the contribution of root phenes to common bean shoot biomass and grain yield under combined stress (drought and low P). The pot study assessed eight genotypes, with four treatments combining water regimes (drought and non-stress) and phosphorus levels (200 and 25) mg P kg−1 soil. In the field study, 24 common bean genotypes were also grown in high and low phosphorus (40 kg P ha−1 and without P application) under irrigation and limited water. The grain yield from fields under drought and P stress were correlated with the pot data on root traits. The response of root phenes to drought and phosphorus stress appeared to be related to the deep and shallow root systems, respectively. Deep rooted genotypes produced more total root biomass and high taproot lateral branching density, which resulted in high total root length under drought and low P stress, while shallow rooted genotypes had low total root biomass and less taproot lateral branching. Increased shoot biomass and grain yield under drought and low P was associated with higher mean values of taproot lateral branching density and total taproot length. Genotypes SER 125, BFS 81, FBN12111-66 and MER 22 11-28 showed a greater score of tap root branching density in the pot study with the highest grain yield in the field under low P and drought stress. Therefore, these can be recommended for use in low phosphorus and drought stress environment or serve as parents for improving phosphorus use efficiency and drought tolerance in common bean.

We assess the discriminative strength of three different satellite spectral settings (HyspIRI, the forthcoming Landsat 9 and Sentinel 2-MSI), in mapping tomato (Solanum lycopersicum Linnaeus) plants grown under hydroponic system, using human-excreta derived materials (HEDM), namely, anaerobic baffled reactor (ABR) effluent and nitrified urine concentrate (NUC) and commercial hydroponic fertilizer mix (CHFM) as main sources of nutrients. Simulated spectral settings of HyspIRI, Landsat 9 and Sentinel 2-MSI were resampled from spectrometric proximally sensed data. Discriminant analysis (DA) was applied in discriminating tomatoes grown under these different nutrient sources. Results showed that the simulated spectral settings of HyspIRI sensor better discriminate tomatoes grown under different fertilizer regimes when compared to Landsat 9 OLI and Sentinel-2 MSI spectral configurations. Using the DA algorithm, HyspIRI exhibited high overall accuracy (OA) of 0.99 and a kappa statistic of 0.99 whereas Landsat OLI and Sentinel-2 MSI exhibited OA of 0.94 and 0.95 and 0.79 and 0.85 kappa statistics, respectively. Simulated HyspIRI wavebands 710, 720, 690, 840, 1370 and 2110 nm, Sentinel 2-MSI bands 7 (783 nm), 6 (740 nm), 5 (705 nm) and 8a (865 nm) as well as Landsat bands 5 (865 nm), 6 (1610 nm), 7 (2200 nm) and 8 (590 nm), in order of importance, were selected as the most suitable bands for discriminating tomatoes grown under different fertilizer regimes. Overall, the performance of simulated HyspIRI, Landsat 9 OLI-2 and Sentinel-2 MSI spectral bands seem to bring new opportunities for crop monitoring.