128 results on '"Alexander Day"'
Search Results
2. Cohort profile: rationale and methods of UK Biobank repeat imaging study eye measures to study dementia
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Martin McKibbin, Tariq Aslam, Sarah Barman, Jenny Barrett, Paul Bishop, Roxana Carare, Usha Chakravarthy, Michelle Chan, Alexander Day, Parul Desai, Bal Dhillon, Andrew Dick, Cathy Egan, Sarah Ennis, Paul Foster, Marcus Fruttiger, John Gallacher, Jane Gibson, Jeremy Guggenheim, Chris Hammond, Alison Hardcastle, Simon Harding, Ruth Hogg, Pirro Hysi, Anthony Khawaja, Gerassimos Lascaratos, Andrew Lotery, Phil Luthert, Tom Macgillivray, Sarah Mackie, Bernadette Mcguinness, Gareth Mckay, Tony Moore, James Morgan, Eoin O’sullivan, Chris Owen, Praveen Patel, Euan Paterson, Axel Petzold, Alicja Rudnicka, Paul J Foster, Naomi Allen, Peng Tee Khaw, Praveen J Patel, Konstantinos Balaskas, Richard Oram, Robert Luben, Tasanee Braithwaite, Graeme Black, Christopher G Owen, Zihan Sun, David Garway-Heath, Thomas Littlejohns, Simon Sheard, Sharon Chua, Pearse Keane, Denize Atan, Savita Madhusudhan, and Alexander Doney
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Medicine - Abstract
Purpose The retina provides biomarkers of neuronal and vascular health that offer promising insights into cognitive ageing, mild cognitive impairment and dementia. This article described the rationale and methodology of eye and vision assessments with the aim of supporting the study of dementia in the UK Biobank Repeat Imaging study.Participants UK Biobank is a large-scale, multicentre, prospective cohort containing in-depth genetic, lifestyle, environmental and health information from half a million participants aged 40–69 enrolled in 2006–2010 across the UK. A subset (up to 60 000 participants) of the cohort will be invited to the UK Biobank Repeat Imaging Study to collect repeated brain, cardiac and abdominal MRI scans, whole-body dual-energy X-ray absorptiometry, carotid ultrasound, as well as retinal optical coherence tomography (OCT) and colour fundus photographs.Findings to date UK Biobank has helped make significant advances in understanding risk factors for many common diseases, including for dementia and cognitive decline. Ophthalmic genetic and epidemiology studies have also benefited from the unparalleled combination of very large numbers of participants, deep phenotyping and longitudinal follow-up of the cohort, with comprehensive health data linkage to disease outcomes. In addition, we have used UK Biobank data to describe the relationship between retinal structures, cognitive function and brain MRI-derived phenotypes.Future plans The collection of eye-related data (eg, OCT), as part of the UK Biobank Repeat Imaging study, will take place in 2022–2028. The depth and breadth and longitudinal nature of this dataset, coupled with its open-access policy, will create a major new resource for dementia diagnostic discovery and to better understand its association with comorbid diseases. In addition, the broad and diverse data available in this study will support research into ophthalmic diseases and various other health outcomes beyond dementia.
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- 2023
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3. Perspectives and experiences of the first geriatricians trained in Canada.
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Eric Kai-Chung Wong, Alexander Day, Maria Zorzitto, and Joanna E M Sale
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Medicine ,Science - Abstract
Many Canadian-trained geriatricians from the subspecialty's first decade of existence continue to practice today. The objective of this study was to examine the experiences and perspectives of the earliest cohort of geriatricians in Canada. Using qualitative description method, we conducted semi-structured interviews to explore participants' experiences in training and practice. We included geriatricians who trained in Canada between 1980-1989 and were in active clinical practice as of October 2021. Each transcript was coded independently by two investigators. Thematic analysis was used to develop key themes. Fourteen participants (43% female, mean years in practice 35.9) described their choice to enter geriatric medicine, their training process, the roles of a geriatrician, challenges facing the profession and advice for trainees. Two themes were developed from the data: (i) advocacy for the older adult and (ii) geriatrics as "the road less taken". Advocacy was described as the "core mission" of a geriatrician. Participants discussed the importance of advocacy in clinical practice, education, research and disseminating geriatric principles in the health system and society. "The road less taken" reflected the challenges participants faced during training, which led to relatively few geriatricians for the growing number of older adults in Canada. Despite these challenges, participants described rewarding careers and encouraged trainees to consider the profession.
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- 2023
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4. Serum inflammatory profiles in cystic fibrosis mice with and without Bordetella pseudohinzii infection
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Paul M. Litman, Alexander Day, Thomas J. Kelley, and Rebecca J. Darrah
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Medicine ,Science - Abstract
Abstract Cystic fibrosis (CF) is an autosomal recessive disease caused by dysfunctional cystic fibrosis transmembrane conductance regulator (CFTR) protein, and is marked by an accumulation of mucus in affected airways resulting in persistent infection and chronic inflammation. Quantitative differences in inflammatory markers have been observed in CF patient serum, tracheal cells, and bronchoalveolar lavage fluid, in the absence of detectable infection, implying that absent CFTR function alone may result in dysregulated immune responses. To examine the relationship between absent CFTR and systemic inflammation, 22 analytes were measured in CF mice (F508del/F508del) sera using the MSD multiplex platform. Pro-inflammatory cytokines IL-2, TNF-α, IL-17α, IFN-γ, IL-1β, and MIP-3α are significantly elevated in infection-naïve CF mice (p
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- 2021
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5. Socioeconomic risk factors and age-related macular degeneration in the UK Biobank study
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Martin McKibbin, Tariq Aslam, Sarah Barman, Jenny Barrett, Paul Bishop, Peter Blows, Catey Bunce, Roxana Carare, Usha Chakravarthy, Michelle Chan, David Crabb, Philippa Cumberland, Alexander Day, Parul Desai, Bal Dhillon, Andrew Dick, Cathy Egan, Sarah Ennis, Marcus Fruttiger, John Gallacher, Jane Gibson, Dan Gore, Jeremy Guggenheim, Chris Hammond, Alison Hardcastle, Simon Harding, Ruth Hogg, Pirro Hysi, Anthony Khawaja, Gerassimos Lascaratos, Andrew Lotery, Phil Luthert, Tom Macgillivray, Sarah Mackie, Keith Martin, Michelle Mcgaughey, Bernadette Mcguinness, Danny Mitry, Tony Moore, James Morgan, Zaynah Muthy, Chris Owen, Praveen Patel, Euan Paterson, Tunde Peto, Axel Petzold, Jugnoo Rahi, Alicja Rudnicka, Jay Self, Sobha Sivaprasad, David Steel, Irene Stratton, Nicholas Strouthidis, Cathie Sudlow, Caroline Thaung, Dhanes Thomas, Emanuele Trucco, Adnan Tufail, Veronique Vitart, Stephen Vernon, Ananth Viswanathan, Jayne Woodside, Max Yates, Yalin Zheng, Cathy Williams, Paul J Foster, Katie Williams, David Garway-Heath, Eoin O'Sullivan, Jennifer Lai Yee Yip, Sharon Chua, Pearse Keane, and Sir Khaw
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Ophthalmology ,RE1-994 - Abstract
Objective There is contrasting evidence on the relationship between socioeconomic status (SES) and age-related macular degeneration (AMD), the most common cause of visual impairment (VI) in developed countries. This study examines the relationship between SES, cardiovascular risk factors and self-reported AMD.Methods and analysis Over 500000 people participated in the UK Biobank study from 2006 to 2019, with sociodemographic data and clinical measurements collected using standardised procedures. Visual acuity was measured in 117907 participants with VI defined as LogMAR ≤0.3. We used logistic regression to examine the cross-sectional associations between SES and self-reported AMD.Results Self-reported AMD was available for 133339 participants aged 50 and older. People reporting AMD had higher academic qualifications, lower income, were unable to work due to disability, have higher BMI, diabetes and vascular heart disease after adjusting for age and sex. In a multivariable analysis, higher income was protective of AMD and economic inactivity due to disability increased the odds of AMD (2.02, 95% CI 1.13 to 3.61). Both associations were independent of cardiovascular factors, but was no longer significant after adjusting for VI.Conclusions The association between education, employment and household income with AMD was independent of cardiovascular risk factors.
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- 2021
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6. Numerical studies on non-linearity of added resistance and ship motions of KVLCC2 in short and long waves
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Olgun Hizir, Mingyu Kim, Osman Turan, Alexander Day, Atilla Incecik, and Yongwon Lee
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Ocean engineering ,TC1501-1800 ,Naval architecture. Shipbuilding. Marine engineering ,VM1-989 - Abstract
In this study, numerical simulations for the prediction of added resistance for KVLCC2 with varying wave steepness are performed using a Computational Fluid Dynamics (CFD) method and a 3-D linear potential method, and then the non-linearities of added resistance and ship motions are investigated in regular short and long waves. Firstly, grid convergence tests in short and long waves are carried out to establish an optimal mesh system for CFD simulations. Secondly, numerical simulations are performed to predict ship added resistance and vertical motion responses in short and long waves and the results are verified using the available experimental data. Finally, the non-linearities of added resistance and ship motions with unsteady wave patterns in the time domain are investigated with the increase in wave steepness in both short and long waves. The present systematic study demonstrates that the numerical results have a reasonable agreement with the experimental data and emphasizes the non-linearity in the prediction of the added resistance and the ship motions with the increasing wave steepness in short and long waves. Keywords: Added resistance, Wave steepness, Short waves, Potential flow, CFD, KVLCC2
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- 2019
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7. Mutations in SPATA13/ASEF2 cause primary angle closure glaucoma.
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Naushin H Waseem, Sancy Low, Amna Z Shah, Deepa Avisetti, Pia Ostergaard, Michael Simpson, Katarzyna A Niemiec, Belen Martin-Martin, Hebah Aldehlawi, Saima Usman, Pak Sang Lee, Anthony P Khawaja, Jonathan B Ruddle, Ameet Shah, Ege Sackey, Alexander Day, Yuzhen Jiang, Geoff Swinfield, Ananth Viswanathan, Giovanna Alfano, Christina Chakarova, Heather J Cordell, David F Garway-Heath, Peng T Khaw, Shomi S Bhattacharya, Ahmad Waseem, and Paul J Foster
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Genetics ,QH426-470 - Abstract
Current estimates suggest 50% of glaucoma blindness worldwide is caused by primary angle-closure glaucoma (PACG) but the causative gene is not known. We used genetic linkage and whole genome sequencing to identify Spermatogenesis Associated Protein 13, SPATA13 (NM_001166271; NP_001159743, SPATA13 isoform I), also known as ASEF2 (Adenomatous polyposis coli-stimulated guanine nucleotide exchange factor 2), as the causal gene for PACG in a large seven-generation white British family showing variable expression and incomplete penetrance. The 9 bp deletion, c.1432_1440del; p.478_480del was present in all affected individuals with angle-closure disease. We show ubiquitous expression of this transcript in cell lines derived from human tissues and in iris, retina, retinal pigment and ciliary epithelia, cornea and lens. We also identified eight additional mutations in SPATA13 in a cohort of 189 unrelated PACS/PAC/PACG samples. This gene encodes a 1277 residue protein which localises to the nucleus with partial co-localisation with nuclear speckles. In cells undergoing mitosis SPATA13 isoform I becomes part of the kinetochore complex co-localising with two kinetochore markers, polo like kinase 1 (PLK-1) and centrosome-associated protein E (CENP-E). The 9 bp deletion reported in this study increases the RAC1-dependent guanine nucleotide exchange factors (GEF) activity. The increase in GEF activity was also observed in three other variants identified in this study. Taken together, our data suggest that SPATA13 is involved in the regulation of mitosis and the mutations dysregulate GEF activity affecting homeostasis in tissues where it is highly expressed, influencing PACG pathogenesis.
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- 2020
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8. Effect of passive flow control on the aerodynamic performance, entropy generation and aeroacoustic noise of axial turbines for wave energy extractor
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Shehata, Ahmed S., Xiao, Qing, Kotb, Mohamed A., Selim, Mohamed M., Elbatran, A.H., and Alexander, Day
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- 2018
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9. Enhancement of performance of wave turbine during stall using passive flow control: First and second law analysis
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Shehata, Ahmed S., Xiao, Qing, Selim, Mohamed M., Elbatran, A.H., and Alexander, Day
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- 2017
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10. Passive flow control for aerodynamic performance enhancement of airfoil with its application in Wells turbine – Under oscillating flow condition
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Shehata, Ahmed S., Xiao, Qing, Saqr, Khalid M., Naguib, Ahmed, and Alexander, Day
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- 2017
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11. A new polygenic score for refractive error improves detection of children at risk of high myopia but not the prediction of those at risk of myopic macular degeneration
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Rosie Clark, Samantha Sze-Yee Lee, Ran Du, Yining Wang, Sander C.M. Kneepkens, Jason Charng, Yu Huang, Michael L. Hunter, Chen Jiang, J.Willem L. Tideman, Ronald B. Melles, Caroline C.W. Klaver, David A. Mackey, Cathy Williams, Hélène Choquet, Kyoko Ohno-Matsui, Jeremy A. Guggenheim, Joan E. Bailey-Wilson, Paul N. Baird, Veluchamy A. Barathi, Ginevra Biino, Kathryn P. Burdon, Harry Campbell, Li Jia Chen, Ching-Yu Cheng, Emily Y. Chew, Jamie E. Craig, Margaret M. Deangelis, Cécile Delcourt, Xiaohu Ding, Qiao Fan, Maurizio Fossarello, Paul J. Foster, Puya Gharahkhani, Xiaobo Guo, Annechien E.G. Haarman, Toomas Haller, Christopher J. Hammond, Xikun Han, Caroline Hayward, Mingguang He, Alex W. Hewitt, Quan Hoang, Pirro G. Hysi, Adriana I. Iglesias, Robert P. Igo, Sudha K. Iyengar, Jost B. Jonas, Mika Kähönen, Jaakko Kaprio, Anthony P. Khawaja, Barbara E. Klein, Jonathan H. Lass, Kris Lee, Terho Lehtimäki, Deyana Lewis, Qing Li, Shi-Ming Li, Leo-Pekka Lyytikäinen, Stuart MacGregor, Nicholas G. Martin, Akira Meguro, Andres Metspalu, Candace Middlebrooks, Masahiro Miyake, Nobuhisa Mizuki, Anthony Musolf, Stefan Nickels, Konrad Oexle, Chi Pui Pang, Olavi Pärssinen, Andrew D. Paterson, Norbert Pfeiffer, Ozren Polasek, Jugnoo S. Rahi, Olli Raitakari, Igor Rudan, Srujana Sahebjada, Seang-Mei Saw, Claire L. Simpson, Dwight Stambolian, E-Shyong Tai, Milly S. Tedja, J. Willem L. Tideman, Akitaka Tsujikawa, Cornelia M. van Duijn, Virginie J.M. Verhoeven, Veronique Vitart, Ningli Wang, Ya Xing Wang, Juho Wedenoja, Wen Bin Wei, Katie M. Williams, James F. Wilson, Robert Wojciechowski, Jason C.S. Yam, Kenji Yamashiro, Maurice K.H. Yap, Seyhan Yazar, Shea Ping Yip, Terri L. Young, Xiangtian Zhou, Naomi Allen, Tariq Aslam, Denize Atan, Sarah Barman, Jenny Barrett, Paul Bishop, Graeme Black, Catey Bunce, Roxana Carare, Usha Chakravarthy, Michelle Chan, Sharon Chua, Valentina Cipriani, Alexander Day, Parul Desai, Bal Dhillon, Andrew Dick, Alexander Doney, Cathy Egan, Sarah Ennis, Paul Foster, Marcus Fruttiger, John Gallacher, David Garway-Heath, Jane Gibson, Dan Gore, Jeremy Guggenheim, Chris Hammond, Alison Hardcastle, Simon Harding, Ruth Hogg, Pirro Hysi, Pearse A. Keane, Peng Tee Khaw, Anthony Khawaja, Gerassimos Lascaratos, Thomas Littlejohns, Andrew Lotery, Phil Luthert, Tom MacGillivray, Sarah Mackie, Bernadette McGuinness, Gareth McKay, Martin McKibbin, Danny Mitry, Tony Moore, James Morgan, Zaynah Muthy, Eoin O'Sullivan, Chris Owen, Praveen Patel, Euan Paterson, Tunde Peto, Axel Petzold, Nikolas Pontikos, Jugnoo Rahi, Alicja Rudnicka, Jay Self, Panagiotis Sergouniotis, Sobha Sivaprasad, David Steel, Irene Stratton, Nicholas Strouthidis, Cathie Sudlow, Robyn Tapp, Caroline Thaung, Dhanes Thomas, Emanuele Trucco, Adnan Tufail, Stephen Vernon, Ananth Viswanathan, Katie Williams, Jayne Woodside, Max Yates, Jennifer Yip, Yalin Zheng, Neurology, Ophthalmology, APH - Mental Health, APH - Methodology, Amsterdam Neuroscience - Neuroinfection & -inflammation, Epidemiology, Clinical Genetics, and Erasmus MC other
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All institutes and research themes of the Radboud University Medical Center ,General Medicine ,General Biochemistry, Genetics and Molecular Biology ,Sensory disorders Donders Center for Medical Neuroscience [Radboudumc 12] - Abstract
Contains fulltext : 292919.pdf (Publisher’s version ) (Open Access) BACKGROUND: High myopia (HM), defined as a spherical equivalent refractive error (SER) ≤ -6.00 diopters (D), is a leading cause of sight impairment, through myopic macular degeneration (MMD). We aimed to derive an improved polygenic score (PGS) for predicting children at risk of HM and to test if a PGS is predictive of MMD after accounting for SER. METHODS: The PGS was derived from genome-wide association studies in participants of UK Biobank, CREAM Consortium, and Genetic Epidemiology Research on Adult Health and Aging. MMD severity was quantified by a deep learning algorithm. Prediction of HM was quantified as the area under the receiver operating curve (AUROC). Prediction of severe MMD was assessed by logistic regression. FINDINGS: In independent samples of European, African, South Asian and East Asian ancestry, the PGS explained 19% (95% confidence interval 17-21%), 2% (1-3%), 8% (7-10%) and 6% (3-9%) of the variation in SER, respectively. The AUROC for HM in these samples was 0.78 (0.75-0.81), 0.58 (0.53-0.64), 0.71 (0.69-0.74) and 0.67 (0.62-0.72), respectively. The PGS was not associated with the risk of MMD after accounting for SER: OR = 1.07 (0.92-1.24). INTERPRETATION: Performance of the PGS approached the level required for clinical utility in Europeans but not in other ancestries. A PGS for refractive error was not predictive of MMD risk once SER was accounted for. FUNDING: Supported by the Welsh Government and Fight for Sight (24WG201).
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- 2023
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12. Hydrodynamic interactions between two ships travelling or stationary in shallow waters
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Yuan, Zhi-Ming, Incecik, Atilla, Dai, Saishuai, Alexander, Day, Ji, Chun-Yan, and Zhang, Xinshu
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- 2015
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13. State-Directed Capitalist Agrarian Change in the Creation of China’s Biggest Tea County: Integrating Capital and Labor in Meitan County, Guizhou
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Alexander Day
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General Medicine - Published
- 2022
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14. The Association of Alcohol Consumption with Glaucoma and Related Traits
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Kelsey V. Stuart, Robert N. Luben, Alasdair N. Warwick, Kian M. Madjedi, Praveen J. Patel, Mahantesh I. Biradar, Zihan Sun, Mark A. Chia, Louis R. Pasquale, Janey L. Wiggs, Jae H. Kang, Jihye Kim, Hugues Aschard, Jessica H. Tran, Marleen A.H. Lentjes, Paul J. Foster, Anthony P. Khawaja, Mark Chia, Sharon Chua, Ron Do, Paul Foster, Jae Kang, Alan Kastner, Anthony Khawaja, Marleen Lentjes, Robert Luben, Kian Madjedi, Giovanni Montesano, Louis Pasquale, Kelsey Stuart, Alasdair Warwick, Janey Wiggs, Naomi Allen, Tariq Aslam, Denize Atan, Sarah Barman, Jenny Barrett, Paul Bishop, Graeme Black, Tasanee Braithwaite, Roxana Carare, Usha Chakravarthy, Michelle Chan, Alexander Day, Parul Desai, Bal Dhillon, Andrew Dick, Alexander Doney, Cathy Egan, Sarah Ennis, Marcus Fruttiger, John Gallacher, David (Ted) Garway-Heath, Jane Gibson, Jeremy Guggenheim, Chris Hammond, Alison Hardcastle, Simon Harding, Ruth Hogg, Pirro Hysi, Pearse Keane, Peng Tee Khaw, Gerassimos Lascaratos, Thomas Littlejohns, Andrew Lotery, Phil Luthert, Tom MacGillivray, Sarah Mackie, Bernadette McGuinness, Gareth McKay, Martin McKibbin, Tony Moore, James Morgan, Eoin O'Sullivan, Richard Oram, Chris Owen, Praveen Patel, Euan Paterson, Tunde Peto, Axel Petzold, Nikolas Pontikos, Jugnoo Rahi, Alicja Rudnicka, Naveed Sattar, Jay Self, Panagiotis Sergouniotis, Sobha Sivaprasad, David Steel, Irene Stratton, Nicholas Strouthidis, Cathie Sudlow, Robyn Tapp, Dhanes Thomas, Emanuele Trucco, Adnan Tufail, Ananth Viswanathan, Veronique Vitart, Mike Weedon, Katie Williams, Cathy Williams, Jayne Woodside, Max Yates, Jennifer Yip, Yalin Zheng, Tin Aung, Kathryn Burdon, Li Chen, Ching-Yu Cheng, Jamie Craig, Angela Cree, Victor de Vries, Sjoerd Driessen, John Fingert, Puya Gharahkhani, Christopher Hammond, Caroline Hayward, Alex Hewitt, Nomdo Jansonius, Fridbert Jonansson, Jost Jonas, Michael Kass, Chiea Khor, Caroline Klaver, Jacyline Koh, Stuart MacGregor, David Mackey, Paul Mitchell, Calvin Pang, Francesca Pasutto, Norbert Pfeiffer, Ozren Polašek, Wishal Ramdas, Alexander Schuster, Ayellet Segrè, Einer Stefansson, Kári Stefánsson, Gudmar Thorleifsson, Unnur Thorsteinsdottir, Cornelia van Duijn, Joëlle Vergroesen, Eranga Vithana, James Wilson, Robert Wojciechowski, Tien Wong, and Terri Young
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General Medicine - Published
- 2022
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15. Verification of a new radiation condition for two ships advancing in waves
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Yuan, Zhi-Ming, Incecik, Atilla, and Alexander, Day
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- 2014
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16. Serum inflammatory profiles in cystic fibrosis mice with and without Bordetella pseudohinzii infection
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Alexander Day, Rebecca J. Darrah, Paul Litman, and Thomas J. Kelley
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Male ,Cystic Fibrosis ,Bordetella ,Science ,Cystic Fibrosis Transmembrane Conductance Regulator ,Inflammation ,Systemic inflammation ,Cystic fibrosis ,Article ,Mice ,Immune system ,medicine ,Animals ,Bordetella Infections ,Multidisciplinary ,biology ,medicine.diagnostic_test ,business.industry ,medicine.disease ,Mucus ,Cystic fibrosis transmembrane conductance regulator ,Mice, Inbred C57BL ,Disease Models, Animal ,Chronic infection ,Bronchoalveolar lavage ,Mutation ,Immunology ,biology.protein ,Cytokines ,Medicine ,Female ,medicine.symptom ,Infection ,business - Abstract
Cystic fibrosis (CF) is an autosomal recessive disease caused by dysfunctional cystic fibrosis transmembrane conductance regulator (CFTR) protein, and is marked by an accumulation of mucus in affected airways resulting in persistent infection and chronic inflammation. Quantitative differences in inflammatory markers have been observed in CF patient serum, tracheal cells, and bronchoalveolar lavage fluid, in the absence of detectable infection, implying that absent CFTR function alone may result in dysregulated immune responses. To examine the relationship between absent CFTR and systemic inflammation, 22 analytes were measured in CF mice (F508del/F508del) sera using the MSD multiplex platform. Pro-inflammatory cytokines IL-2, TNF-α, IL-17α, IFN-γ, IL-1β, and MIP-3α are significantly elevated in infection-naïve CF mice (p p = 0.00003, p = 0.004). Additionally, six general markers of inflammation are significantly different from non-CF controls (p Bordetella pseudohinzii infections. There are no statistical differences in nearly all inflammatory markers when compared to their infection-naïve CF counterparts, except in the Th2-derived IL-4 and IL-5 which demonstrate significant decreases following exposure (p = 0.046, p = 0.045). Lastly, following acute infection, CF mice demonstrate elevations in nearly all inflammatory markers, but exhibit a shortened return to uninfected levels over time, and suppression of Th1-derived IL-2 and IL-5 (p = 0.043, p = 0.011). These results imply that CF mice have a persistent inflammatory profile often indistinguishable from chronic infection, and a dysregulated humoral response during and following active infection.
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- 2021
17. The association between serum lipids and intraocular pressure in 2 large United Kingdom cohorts
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Kian M. Madjedi, Kelsey V. Stuart, Sharon Y.L. Chua, Robert N. Luben, Alasdair Warwick, Louis R. Pasquale, Jae H. Kang, Janey L. Wiggs, Marleen A.H. Lentjes, Hugues Aschard, Naveed Sattar, Paul J. Foster, Anthony P. Khawaja, Mark Chia, Ron Do, Alan Kastner, Jihye Kim, Giovanni Montesano, Denize Atan, Tariq Aslam, Sarah A. Barman, Jenny H. Barrett, Paul Bishop, Peter Blows, Catey Bunce, Roxana O. Carare, Usha Chakravarthy, Michelle Chan, David P. Crabb, Philippa M. Cumberland, Alexander Day, Parul Desai, Bal Dhillon, Andrew D. Dick, Cathy Egan, Sarah Ennis, Paul Foster, Marcus Fruttiger, John E.J. Gallacher, David F. Garway-Heath, Jane Gibson, Dan Gore, Jeremy A. Guggenheim, Chris J. Hammond, Alison Hardcastle, Simon P. Harding, Ruth E. Hogg, Pirro Hysi, Pearse A. Keane, Sir Peng T. Khaw, Gerassimos Lascaratos, Andrew J. Lotery, Tom Macgillivray, Sarah Mackie, Keith Martin, Michelle McGaughey, Bernadette McGuinness, Gareth J. McKay, Martin McKibbin, Danny Mitry, Tony Moore, James E. Morgan, Zaynah A. Muthy, Eoin O’Sullivan, Chris G. Owen, Praveen Patel, Euan Paterson, Tunde Peto, Axel Petzold, Jugnoo S. Rahi, Alicja R. Rudnikca, Jay Self, Sobha Sivaprasad, David Steel, Irene Stratton, Nicholas Strouthidis, Cathie Sudlow, Dhanes Thomas, Emanuele Trucco, Adnan Tufail, Veronique Vitart, Stephen A. Vernon, Ananth C. Viswanathan, Cathy Williams, Katie Williams, Jayne V. Woodside, MaxM. Yates, Jennifer Yip, Yalin Zheng, NIHR Biomedical Research Centre [London], Guy's and St Thomas' NHS Foundation Trust-King‘s College London, University of Calgary, University of Cambridge [UK] (CAM), University College of London [London] (UCL), Icahn School of Medicine at Mount Sinai [New York] (MSSM), Harvard Medical School [Boston] (HMS), Örebro University, Institut Pasteur [Paris] (IP), University of Glasgow, Supported by UCL Overseas Research Scholarship (K.V.S.), Fight for Sight, London, United Kingdom (grant no.: 1956A [K.V.S.]), The Desmond Foundation (K.V.S.), the Wellcome Trust (grant no.: 220558/Z/20/Z [A.W.]), Alcon (P.J.F.), United Kingdom Research and Innovation Future Leaders Fellowship (A.P.K.), Moorfields Eye Charity (Springboard Award [R.N.L.] and Career Development Fellowship [A.P.K.]), the National Eye Institute, National Institutes of Health, Bethesda, Maryland (grant nos.: EY015473 [L.R.P.], EY032559 [L.R.P.], [J.L.W.]), Research to Prevent Blindness, Inc., New York, New York (Challenge Grant [L.R.P., J.L.W.]), The Glaucoma Foundation, New York, New York (L.R.P.), Astra Zeneca (N.S.), Boehringer Ingelheim (N.S.), Novartis (N.S.), Roche Diagnostics (N.S.), Association for Research in Vision and Ophthalmology Foundation (David Epstein Award [J.L.W.]), and UK Research and Innovation Future Leaders Fellowship (Medical Research Council grant no.: MR/T040912/1 [A.P.K.]). The authors acknowledge a proportion of their financial support from the United Kingdom Department of Health through an award made by the National Institute for Health Research to Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology for a Biomedical Research Centre for Ophthalmology. This research used data from the UK Biobank Resource under data access request nos. 2112 and 36741. The UK Biobank Eye and Vision Consortium is supported by grants from Moorfields Eye Charity, The NIHR Biomedical Research Centre at Moorfields Eye Hospital NHS Foundation Trust and UCL Institute of Ophthalmology, the Alcon Research Institute, and the International Glaucoma Association (United Kingdom). The EPIC-Norfolk study was supported by the Medical Research Council, United Kingdom (grant nos.: SP2024/0201 and MR/N003284/1), and Cancer Research United Kingdom (grant nos.: G9502233 and C864/A8257)., Neurology, Ophthalmology, APH - Mental Health, APH - Methodology, and Amsterdam Neuroscience - Neuroinfection & -inflammation
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Intraocular pressure ,Cholesterol, HDL ,Glaucoma ,Cholesterol, LDL ,Middle Aged ,Lipids ,United Kingdom ,Ophthalmology ,Cross-Sectional Studies ,Cholesterol ,SDG 3 - Good Health and Well-being ,RA0421 ,Risk Factors ,Humans ,RE ,[SDV.SPEE]Life Sciences [q-bio]/Santé publique et épidémiologie ,Prospective Studies ,Triglycerides ,Aged - Abstract
Purpose: Serum lipids are modifiable, routinely collected blood test features associated with cardiovascular health. We examined the association of commonly collected serum lipid measures (total cholesterol [TC], high-density lipoprotein cholesterol [HDL-C], low-density lipoprotein cholesterol [LDL-C], and triglycerides) with intraocular pressure (IOP). Design: Cross-sectional study in the UK Biobank and European Prospective Investigation into Cancer and Nutrition (EPIC)-Norfolk cohorts. Participants: We included 94 323 participants from the UK Biobank (mean age, 57 years) and 6230 participants from the EPIC-Norfolk (mean age, 68 years) cohorts with data on TC, HDL-C, LDL-C, and triglycerides collected between 2006 and 2009. Methods: Multivariate linear regression adjusting for demographic, lifestyle, anthropometric, medical, and ophthalmic covariables was used to examine the associations of serum lipids with corneal-compensated IOP (IOPcc). Main Outcome Measures: Corneal-compensated IOP. Results: Higher levels of TC, HDL-C, and LDL-C were associated independently with higher IOPcc in both cohorts after adjustment for key demographic, medical, and lifestyle factors. For each 1-standard deviation increase in TC, HDL-C, and LDL-C, IOPcc was higher by 0.09 mmHg (95% confidence interval [CI], 0.06–0.11 mmHg; P < 0.001), 0.11 mmHg (95% CI, 0.08–0.13 mmHg; P < 0.001), and 0.07 mmHg (95% CI, 0.05–0.09 mmHg; P < 0.001), respectively, in the UK Biobank cohort. In the EPIC-Norfolk cohort, each 1-standard deviation increase in TC, HDL-C, and LDL-C was associated with a higher IOPcc by 0.19 mmHg (95% CI, 0.07–0.31 mmHg; P = 0.001), 0.14 mmHg (95% CI, 0.03–0.25 mmHg; P = 0.016), and 0.17 mmHg (95% CI, 0.06–0.29 mmHg; P = 0.003). An inverse association between triglyceride levels and IOP in the UK Biobank (–0.05 mmHg; 95% CI, –0.08 to –0.03; P < 0.001) was not replicated in the EPIC-Norfolk cohort (P = 0.30). Conclusions: Our findings suggest that serum TC, HDL-C, and LDL-C are associated positively with IOP in 2 United Kingdom cohorts and that triglyceride levels may be associated negatively. Future research is required to assess whether these associations are causal in nature.
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- 2022
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18. An Exploration of Adverse Childhood Experiences, Treatment Types, and Strengths in Adolescent Therapeutic Residential Care
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Clark Fear, Stacey Scholl, Alexander Day, Nicole Hauser, Kenneth M. Coll, and Roger A. Stewart
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education.field_of_study ,media_common.quotation_subject ,Population ,Exploratory research ,Mental health ,Neglect ,Social competence ,education ,Psychological abuse ,Psychology ,Adverse effect ,Empowerment ,Clinical psychology ,media_common - Abstract
Extensive research has documented associations between childhood abuse and neglect and adolescent mental health. This exploratory study adds the examination of differences in types of adverse childhood experiences (ACEs), including abuse, neglect, and household dysfunction, with a little studied population, those in therapeutic residential care. Also documented were the differences between types of treatment categories per the Youth Comprehensive Risk Assessment (YCRA) and adverse experiences, as well as the adolescent strengths of empowerment and social competence related to adverse childhood experiences in therapeutic residential care. Data was generated from 139 youth in two adolescent therapeutic residential care centers. The most commonly reported adverse experiences were emotional abuse (79.9%) and physical neglect (76.3%). Those with lower empowerment and social competence had significantly higher ACEs in the areas of abuse, neglect, and total ACEs. Youth categorized as high risk to others but not to self, had significantly fewer adverse childhood experiences than others. Study findings support broadening the current discourse on types of adverse events and challenges when considering pathways toward strength building and treatment type, especially related to social competence.
- Published
- 2021
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19. London, Royal College of Music Library, MS 2093 (1660s–1670s) ed. by Heather Windram and Terence Charlston, and: London, Lambeth Palace Library, MS 1040 (1650s–1660s) ed. by Andrew Woolley, Heather Windram and Terence Charlston
- Author
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Alexander Day
- Subjects
General Mathematics - Published
- 2022
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20. Comparison of Associations with Different Macular Inner Retinal Thickness Parameters in a Large Cohort
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Anthony P. Khawaja, Sharon Chua, Pirro G. Hysi, Stelios Georgoulas, Hannah Currant, Tomas W. Fitzgerald, Ewan Birney, Fang Ko, Qi Yang, Charles Reisman, David F. Garway-Heath, Chris J. Hammond, Peng T. Khaw, Paul J. Foster, Praveen J. Patel, Nicholas Strouthidis, Denize Atan, Tariq Aslam, Sarah A. Barman, Jenny H. Barrett, Paul Bishop, Peter Blows, Catey Bunce, Roxana O. Carare, Usha Chakravarthy, Michelle Chan, Sharon Y.L. Chua, David P. Crabb, Philippa M. Cumberland, Alexander Day, Parul Desai, Bal Dhillon, Andrew D. Dick, Cathy Egan, Sarah Ennis, Paul Foster, Marcus Fruttiger, John E.J. Gallacher, Jane Gibson, Dan Gore, Jeremy A. Guggenheim, Alison Hardcastle, Simon P. Harding, Ruth E. Hogg, Pirro Hysi, Pearse A. Keane, Sir Peng T. Khaw, Gerassimos Lascaratos, Andrew J. Lotery, Tom Macgillivray, Sarah Mackie, Keith Martin, Michelle McGaughey, Bernadette McGuinness, Gareth J. McKay, Martin McKibbin, Danny Mitry, Tony Moore, James E. Morgan, Zaynah A. Muthy, Eoin O’Sullivan, Chris G. Owen, Praveen Patel, Euan Paterson, Tunde Peto, Axel Petzold, Jugnoo S. Rahi, Alicja R. Rudnikca, Jay Self, Sobha Sivaprasad, David Steel, Irene Stratton, Cathie Sudlow, Dhanes Thomas, Emanuele Trucco, Adnan Tufail, Veronique Vitart, Stephen A. Vernon, Ananth C. Viswanathan, Cathy Williams, Katie Williams, Jayne V. Woodside, Max M. Yates, Jennifer Yip, and Yalin Zheng
- Subjects
0303 health sciences ,Intraocular pressure ,medicine.medical_specialty ,Cross-sectional study ,business.industry ,Glaucoma ,Retinal ,medicine.disease ,Confidence interval ,03 medical and health sciences ,Ophthalmology ,chemistry.chemical_compound ,0302 clinical medicine ,Quartile ,chemistry ,030221 ophthalmology & optometry ,medicine ,sense organs ,business ,Body mass index ,030304 developmental biology ,Cohort study - Abstract
Purpose To describe and compare associations with macular retinal nerve fiber layer (mRNFL), ganglion cell complex (GCC), and ganglion cell–inner plexiform layer (GCIPL) thicknesses in a large cohort. Design Cross-sectional study. Participants We included 42 044 participants in the UK Biobank. The mean age was 56 years. Methods Spectral-domain OCT macular images were segmented and analyzed. Corneal-compensated intraocular pressure (IOPcc) was measured with the Ocular Response Analyzer (Reichert, Corp., Buffalo, NY). Multivariable linear regression was used to examine associations with mean mRNFL, GCC, and GCIPL thicknesses. Factors examined were age, sex, ethnicity, height, body mass index (BMI), smoking status, alcohol intake, Townsend deprivation index, education level, diabetes status, spherical equivalent, and IOPcc. Main Outcome Measures Thicknesses of mRNFL, GCC, and GCIPL. Results We identified several novel independent associations with thinner inner retinal thickness. Thinner inner retina was associated with alcohol intake (most significant for GCIPL: –0.46 μm for daily or almost daily intake compared with special occasion only or never [95% confidence interval (CI), 0.61–0.30]; P = 1.1×10–8), greater social deprivation (most significant for GCIPL: –0.28 μm for most deprived quartile compared with least deprived quartile [95% CI, –0.42 to –0.14]; P = 6.6×10–5), lower educational attainment (most significant for mRNFL: –0.36 μm for less than O level compared with degree level [95% CI, –0.45 to 0.26]; P = 2.3×10–14), and nonwhite ethnicity (most significant for mRNFL comparing blacks with whites: –1.65 μm [95% CI, –1.86 to –1.43]; P = 2.4×10–50). Corneal-compensated intraocular pressure was associated most significantly with GCIPL (–0.04 μm/mmHg [95% CI, –0.05 to –0.03]; P = 4.0×10–10) and was not associated significantly with mRNFL (0.00 μm/mmHg [95% CI, –0.01 to 0.01]; P = 0.77). The variables examined explained a greater proportion of the variance of GCIPL (11%) than GCC (6%) or mRNFL (7%). Conclusions The novel associations we identified may be important to consider when using inner retinal parameters as a diagnostic tool. Associations generally were strongest with GCIPL, particularly for IOP. This suggests that GCIPL may be the superior inner retinal biomarker for macular pathophysiologic processes and especially for glaucoma.
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- 2020
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21. Hydrodynamic Testing of a High Performance Skiff at Model and Full Scale
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Alexander Day, P. Cameron, and Saishuai Dai
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Scale (ratio) ,VM ,Hull ,Full scale ,Range (statistics) ,Transom ,Rudder ,Towing ,Trim ,Mathematics ,Marine engineering - Abstract
Abstract: This study examines the hydrodynamic performance of a high performance skiff hull using three different physical testing techniques which may be used in early stage design for assessment of the upright resistance of sailing vessels. The hull chosen as a benchmark form is a high-speed hard-chine sailing dinghy, typical of modern trends in skiff design, and is broadly similar to some high performance yacht hulls. The 4.55 m hull was tested at full scale in a moderate size towing tank, at 1:2.5 scale in the same tank, and at full-scale by towing on open water. The work presented here builds on the study of Day & Cameron (2017), with the model tests repeated and re-analyzed in the present study and additional results presented. The challenges of full-scale open-water testing are discussed and several potential improvements in practice are identified for future work. Results show that the open water testing broadly matches well with model-scale tank testing, with the mean discrepancy in the measured resistance between the two around 4% over the speed range tested after correction for the presence of the rudder. Agreement is initially less good for the full-scale hull in the tank for higher speeds, both for resistance and trim. ITTC guidelines suggest that blockage may be an issue for the full-scale boat in this size of tank; comparison of the results suggests that blockage, and/or finite depth effects for the full-scale hull in the tank present a substantial problem at the higher speeds. A correction approach for the wave resistance of the full scale results using a calculation based on a linear thin ship theory is effective in this case, and results show that the full scale and model scale tests agree satisfactorily for the majority of the speed range after this correction. In addition to upright resistance in calm water, results are presented for the impact of small waves, the addition of the rudder, and variations in displacement and trim on resistance for a skiff hull. Finally, the results are compared with predictions from the well-known Delft series regression equations, Savitsky's methods, and a thin ship calculation. The thin ship approach gives good agreement for the case in which the hull is trimmed bow-down and the transom is not immersed, while the Savitsky pre-planing approach gives good agreement for the level trim case. The Delft series and Savitsky planing hull approaches do not give good agreement with physical measurements.
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- 2019
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22. Transport processes of the legume symbiosome membrane
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Victoria C Clarke, Patrick C Loughlin, David Alexander Day, and Penelope Mary Collina Smith
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Symbiosis ,transport ,membrane ,legume ,Rhizobia ,Plant culture ,SB1-1110 - Abstract
The symbiosome membrane (SM) is a physical barrier between the host plant and nitrogen-fixing bacteria in the legume-rhizobium symbiosis, and represents a regulated interface for the movement of solutes between the symbionts that is under plant control. The primary nutrient exchange across the SM is the transport of a carbon energy source from plant to bacteroid in exchange for fixed nitrogen. At a biochemical level two channels have been implicated in movement of fixed nitrogen across the SM and a uniporter that transports monovalent dicarboxylate ions has been characterized that would transport fixed carbon. The aquaporin NOD26 may provide a channel for ammonia, but the genes encoding the other transporters have not been identified. Transport of several other solutes, including calcium and potassium, have been demonstrated in isolated symbiosomes, and genes encoding transport systems for the movement of iron, nitrate, sulfate and zinc in nodules have been identified. However, definitively matching transport activities with these genes has proved difficult and many further transport processes are expected on the SM to facilitate the movement of nutrients between the symbionts. Recently, work detailing the SM proteome in soybean has been completed, contributing significantly to the database of known SM proteins. This represents a valuable resource for the identification of transporter protein candidates, some of which may correspond to transport processes previously described, or to novel transport systems in the symbiosis. Putative transporters identified from the proteome include homologues of transporters of sulfate, calcium, peptides and various metal ions. Here we review current knowledge of transport processes of the SM and discuss the requirements for additional transport routes of other nutrients exchanged in the symbiosis, with a focus on transport systems identified through the soybean SM proteome.
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- 2014
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23. Primary care experience and remission of type 2 diabetes: A population-based prospective cohort study
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Simon J. Griffin, Alexander Day, Ann Louise Kinmonth, Hajira Dambha-Miller, Griffin, Simon [0000-0002-2157-4797], and Apollo - University of Cambridge Repository
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Adult ,Pediatrics ,medicine.medical_specialty ,Epidemiology ,Type 2 diabetes ,Disease ,030204 cardiovascular system & hematology ,Cohort Studies ,03 medical and health sciences ,primary care ,0302 clinical medicine ,remission ,Diabetes mellitus ,Patient experience ,Weight Loss ,medicine ,Humans ,030212 general & internal medicine ,Prospective Studies ,Prospective cohort study ,AcademicSubjects/MED00780 ,Primary Health Care ,business.industry ,patient experience ,Doctor–patient relationship ,Odds ratio ,medicine.disease ,Editor's Choice ,Diabetes Mellitus, Type 2 ,Family Practice ,business - Abstract
Background Remission of Type 2 diabetes is achievable through dietary change and weight loss. In the UK, lifestyle advice and referrals to weight loss programmes predominantly occur in primary care where most Type 2 diabetes is managed. Objective To quantify the association between primary care experience and remission of Type 2 diabetes over 5-year follow-up. Methods A prospective cohort study of adults with Type 2 diabetes registered to 49 general practices in the East of England, UK. Participants were followed-up for 5 years and completed the Consultation and Relational Empathy measure (CARE) on diabetes-specific primary care experiences over the first year after diagnosis of the disease. Remission at 5-year follow-up was measured with HbA1c levels. Univariable and multivariable logistic regression models were constructed to quantify the association between primary care experience and remission of diabetes. Results Of 867 participants, 30% (257) achieved remission of Type 2 diabetes at 5 years. Six hundred twenty-eight had complete data at follow-up and were included in the analysis. Participants who reported higher CARE scores in the 12 months following diagnosis were more likely to achieve remission at 5 years in multivariable models; odds ratio = 1.03 (95% confidence interval = 1.01–1.05, P = 0.01). Conclusion Primary care practitioners should pay greater attention to delivering optimal patient experiences alongside clinical management of the disease as this may contribute towards remission of Type 2 diabetes. Further work is needed to examine which aspects of the primary care experience might be optimized and how these could be operationalized.
- Published
- 2021
24. Structure of the Anthrax Protective Antigen D425A Dominant Negative Mutant Reveals a Stalled Intermediate State of Pore Maturation
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Harry Scott, Wei Huang, Kiran Andra, Sireesha Mamillapalli, Srinivas Gonti, Alexander Day, Kaiming Zhang, Nurjahan Mehzabeen, Kevin P. Battaile, Anjali Raju, Scott Lovell, James G. Bann, and Derek J. Taylor
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Models, Molecular ,Antigens, Bacterial ,Protein Conformation ,Structural Biology ,Bacillus anthracis ,Bacterial Toxins ,Cryoelectron Microscopy ,Mutation ,Humans ,Hydrogen-Ion Concentration ,Molecular Biology - Abstract
The tripartite protein complex produced by anthrax bacteria (Bacillus anthracis) is a member of the AB family of β-barrel pore-forming toxins. The protective antigen (PA) component forms an oligomeric prepore that assembles on the host cell surface and serves as a scaffold for binding of lethal and edema factors. Following endocytosis, the acidic environment of the late endosome triggers a pH-induced conformational rearrangement to promote maturation of the PA prepore to a functional, membrane spanning pore that facilitates delivery of lethal and edema factors to the cytosol of the infected host. Here, we show that the dominant-negative D425A mutant of PA stalls anthrax pore maturation in an intermediate state at acidic pH. Our 2.7 Å cryo-EM structure of the intermediate state reveals structural rearrangements that involve constriction of the oligomeric pore combined with an intramolecular dissociation of the pore-forming module. In addition to defining the early stages of anthrax pore maturation, the structure identifies asymmetric conformational changes in the oligomeric pore that are influenced by the precise configuration of adjacent protomers.
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- 2022
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25. Evaluating an innovative integrated training for child and youth services: Lessons learned
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Kenneth M. Coll, Roger A. Stewart, Alexander Day, Stacey Scholl, and Nicole Hauser
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Social Psychology ,Adolescent ,Strategy and Management ,Geography, Planning and Development ,Public Health, Environmental and Occupational Health ,Humans ,Business and International Management ,Child ,Program Evaluation - Abstract
This article highlights one child and youth services agency's journey to develop and pilot a system for tracking training effectiveness for staff. Given the importance of intentional and strong staff training to the success of an agency, the purpose of this study was to report training outcomes across four-time intervals (i.e., immediately after training considered here as baseline, 6 months, 12 months, and 18 months) using a tracking system based on best practices in staff development. Results indicated that the tracking system allowed this agency to measure and describe post-training outcomes for staff across the four-time intervals. It can be inferred that such training positively influenced youth outcomes. Specifically, the training and follow-up expanded staff's ability to effectively internalize concepts and be more intentional with their time for the benefit of youth care.
- Published
- 2021
26. Experimental investigation of higher harmonic wave loads and moments on a vertical cylinder by a phase-manipulation method
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Xingya Feng, Paul H. Taylor, Richard H. J. Willden, Thomas A. A. Adcock, Alexander Day, and Saishuai Dai
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Physics ,Environmental Engineering ,010504 meteorology & atmospheric sciences ,010505 oceanography ,VM ,Phase (waves) ,Ocean Engineering ,Mechanics ,01 natural sciences ,Quality (physics) ,Wave flume ,Harmonics ,Moment (physics) ,Harmonic ,Torque ,Potential flow ,0105 earth and related environmental sciences - Abstract
This paper considers wave loads on bottom mounted vertical cylinders in the regime relevant to offshore wind turbine monopiles, examining the higher harmonics of the loading from non-breaking waves which are important in engineering design. Although we consider measurements of total force, our focus is on the moments applied about the seabed which have received much less attention in the literature. We consider an empirical ‘Stokes-like’ model whereby the magnitude of the higher harmonics of force or moment are dependent on the linear force or moment time-series raised to an appropriate power and a fixed coefficient. We compare this representation to high quality wave flume measurements and fully non-linear potential flow simulations. In general we find good agreement for all of the harmonic structure except for the triple frequency component where there are significant discrepancies. We also extend the Stokes-like model and show that harmonics of moments can be robustly predicted from the force harmonic and an appropriate constant moment arm for each harmonic, so a more elaborate calculation is generally not necessary.
- Published
- 2020
27. Structure of a dominant negative mutant reveals a stalled intermediate state of anthrax protective antigen pore maturation
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Kevin P. Battaile, Kaiming Zhang, Scott Lovell, Wei Huang, Derek J. Taylor, Srinivas Gonti, James G. Bann, N. Mehzabeen, Alexander Day, and Harry Scott
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Mutation ,biology ,Chemistry ,Toxin ,Anthrax toxin ,Chromosomal translocation ,medicine.disease_cause ,biology.organism_classification ,Bacillus anthracis ,Cell biology ,Membrane ,Cytoplasm ,medicine ,Intermediate state - Abstract
Anthrax is a severe bacterial infection caused by Bacillus anthracis, which produces a tripartite toxin that includes protective antigen (PA), lethal factor (LF) and edema factor (EF). A series of dominant-negative mutations have been previously identified that prevent the heptameric PA prepore from forming the pH-induced, membrane spanning beta-barrel pore that is required for translocation of EF and LF to the cytoplasm of the infected cell. Here we show that the dominant negative D425A mutation stalls the formation of the pore at a reversible intermediate maturation state, which exhibits many of the structural aspects of the pore but fails to form the phi(ϕ)-clamp and beta-barrel structure needed for full pore maturation. Overall, this structure reveals that ϕ-clamp and beta-barrel pore formation are later steps in the pathway to pore formation, thereby providing a regulatory mechanism to prevent premature translocation of EF and LF.
- Published
- 2020
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28. Current blockage and extreme forces on a jacket model in focussed wave groups with current
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Alexander Day, Paul H. Taylor, E. Nixon, Yoo Sang Choo, and H. Santo
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Physics ,business.industry ,VM ,Mechanical Engineering ,media_common.quotation_subject ,02 engineering and technology ,Mechanics ,Computational fluid dynamics ,Inertia ,01 natural sciences ,010305 fluids & plasmas ,Physics::Fluid Dynamics ,Stress field ,020303 mechanical engineering & transports ,0203 mechanical engineering ,Drag ,Wave loading ,0103 physical sciences ,Fluid dynamics ,Transient (oscillation) ,Current (fluid) ,business ,media_common - Abstract
This paper documents large laboratory-scale measurements of hydrodynamic force time histories on a realistic 1:80 scale space-frame jacket structure exposed to combined waves and in-line current. The aim is to investigate the fluid flow (and the associated hydrodynamic force) reduction relative to ambient fluid flow due to the presence of the jacket structure as an obstacle array, interpreted as wave–current blockage. Transient focussed wave groups, and embedded wave groups in a smaller regular wave background are generated in a towing tank, and the jacket is towed under different speeds opposite to the wave direction to simulate wave loading with different in-line uniform currents. The measurements are compared with numerical predictions using Computational Fluid Dynamics (CFD), with the actual jacket represented in a three-dimensional numerical wave tank as a porous tower modelled as a uniformly distributed Morison stress field. Good agreement is achieved, both in terms of incident surface elevation as well as total force time histories, all using a single set of Morison drag ( C d ) and inertia ( C m ) coefficients. Substantial force reduction is observed under transient large crest relative to prediction from the present industry design guideline with the same Morison coefficients. We demonstrate the generality of our findings: without influence of Keulegan–Carpenter (KC) number effect, a single invariant set of C d and C m is all that is required to numerically explain and reproduce the measured total force time histories on a realistic jacket model for a large range of wave heights and non-zero current speeds.
- Published
- 2018
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29. Performances That Change the Americas
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Stuart Alexander Day and Stuart Alexander Day
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- Performance art--America--History, Theater--Political aspects--America--History, Radical theater--America--History, Theater and society--America--History
- Abstract
This collection of essays explores activist performances, all connected to theater or performance training, that have changed the Americas—from Canada to the Southern Cone. Through the study of specific examples from numerous countries, the authors of this volume demonstrate a crucial, shared outlook: they affirm that ordinary people change the direction of history through performance. This project offers concrete, compelling cases that emulate the modus operandi of people like historian Howard Zinn. In the same spirit, the chapters treat marginal groups whose stories underscore the potentially unstoppable and transformative power of united, embodied voices. This book will be of great interest to students and scholars of theatre, performance, art and politics.
- Published
- 2022
30. Experimental and numerical analysis of a TLP floating offshore wind turbine
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Juan Amate López, Atilla Incecik, Gonzalo González Almeria, David Clelland, Alexander Day, Gustavo D. Sánchez, Elif Oguz, and OpenMETU
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Offshore construction ,Environmental Engineering ,business.industry ,Astrophysics::High Energy Astrophysical Phenomena ,VM ,020209 energy ,Numerical analysis ,Ocean Engineering ,02 engineering and technology ,Structural engineering ,Turbine ,Water depth ,Aerodynamic force ,Offshore wind power ,0202 electrical engineering, electronic engineering, information engineering ,Environmental science ,Power output ,business ,Physics::Atmospheric and Oceanic Physics ,Marine engineering ,Tension-leg platform - Abstract
This paper describes an experimental and numerical investigation of the Iberdrola TLP wind turbine concept, TLPWIND, in realistic wind and wave conditions. The TLP was coupled to the NREL 5 MW reference turbine and was designed to operate in a water depth of 70 m. The test campaign included free oscillation tests, tests in regular and irregular waves and simulated wind conditions. A Software-in-the-loop approach was adopted to account for the time-varying aerodynamic forces produced by the turbine during the physical experiments. The effect of wind was found to have a significant contribution to the overall response of the platform whilst variation in wave conditions was found to have a relatively small effect on the platform response. A comparison of results from physical and numerical simulations show that, the numerical predictions from FAST were very close to the results obtained from the experiments in some cases, but in other cases the numerical model failed to accurately predict the platform response. The results from both studies show the benefits of such TLP structures in terms of motions which are vital to obtain a high power output from a floating offshore wind turbine.
- Published
- 2018
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31. Performance prediction for sailing dinghies
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Alexander Day
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Engineering ,Environmental Engineering ,Water transport ,Meteorology ,business.industry ,VM ,Crew ,Ocean Engineering ,030229 sport sciences ,Yaw moment ,Wind speed ,03 medical and health sciences ,0302 clinical medicine ,Drag ,Aerodynamic drag ,Performance prediction ,business ,Velocity measurement ,030217 neurology & neurosurgery ,Marine engineering - Abstract
This study describes the development of an approach for performance pr ediction for a sailing dinghy . Key modelling issues addressed include sail depowering for sailing dinghies which cannot reef; effect of crew physique on sailing performance, components of hydrodynamic and aerodynamic drag , decoupling of heel angle from heeling momen t, and the importance of yaw moment equilibrium. In order to illustrate the approaches described, a customised velocity prediction program (VPP) is developed for a Laser dinghy . Results show excellent agreement with measured data for upwind sailing , and correctly predict some phenomena observed in practice . Some discrepancies are found in downwind condition s, but it is speculated that this may be related at least in part to the sailing conditions in which the measured data was gathered. The ef fect of crew weight is studied by comparing time deltas for crews of different physique relative to a baseline 80kg sailor. R esults show relatively high sensitivity of the performance around a race course to the weight of the crew, with a 10kg change contr ibuting to time deltas of more than 60 seconds relative to the baseline sailor over a race of one hour duration at the extremes of the wind speed range examined.
- Published
- 2017
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32. An experimental study of hull girder loads on an intact and damaged naval ship
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Atilla Incecik, Alexander Day, Ermina Begovic, Begovic, Ermina, Day, A. H., and Incecik, A.
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Engineering ,Environmental Engineering ,business.industry ,VM ,020101 civil engineering ,Ocean Engineering ,02 engineering and technology ,Structural engineering ,Response amplitude operator ,01 natural sciences ,Ship motions ,010305 fluids & plasmas ,0201 civil engineering ,Beam (nautical) ,Experimental shear force and bending moments assessment, Roll decay, Equivalent linear roll extinction coefficient ,Hull ,Girder ,Free drift ,0103 physical sciences ,Wave height ,Bending moment ,business ,TC ,Marine engineering - Abstract
The study reported in this paper is focused on experimental investigation of the hull girder loads on an intact and damaged naval ship DTMB 5415 at zero speed. The experimental campaign was carried out in head and beam regular waves at the University of Strathclyde. The effect of the use of moorings in the model experimental setup was investigated in the context of loads assessment, and the moorings are shown to influence the measured hull girder loads at some wave frequencies compared to the free drift case. Therefore the tests in beam seas are performed with free drifting model while the moored model setup was adopted for head seas. The results for ship motions are compared with those from a previous campaign giving an insight into repeatability and uncertainty of measurements. The roll decay of the ship in both intact and damaged conditions is analysed and the linear and quadratic extinction coefficients for the model and the ship scale are reported and detailed discussion on intact-versus-damaged ship roll damping behaviour is given. The results for the hull girder loads are presented for intact and damaged ship. An investigation of the nonlinear effects due to wave height variation in the range wave height to wave length from 1/50 to 1/22 on the shear force and bending moment values was carried out for a range of wave lengths to ship length ratios from 0.8 to 1.4. The results of the extensive campaign are compared against similar experimental studies forming a benchmark data for validation of numerical methods.
- Published
- 2017
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33. Reply to: Discussion on “performance analysis of wells turbine blades using the entropy generation minimization method” by Shehata, A. S., Saqr, K. M., Xiao, Q., Shahadeh, M. F. and Day, A
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Shehata, Ahmed S., Xiao, Qing, Selim, Mohamed M., Elbatran, A.H., Shehadeh, Mohamed F., and Alexander, Day
- Published
- 2018
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34. Theoretical and numerical estimation of ship-to-ship hydrodynamic interaction effects
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Wenhua Zhao, Alexander Day, Chunyan Ji, Atilla Incecik, and Zhiming Yuan
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Engineering ,Environmental Engineering ,VM ,020101 civil engineering ,Near and far field ,Ocean Engineering ,02 engineering and technology ,Wake ,Ship-to-ship problem ,01 natural sciences ,010305 fluids & plasmas ,0201 civil engineering ,Far-field wave pattern ,Rankine source method ,Critical line ,0103 physical sciences ,Wind wave ,Range (statistics) ,Boundary element method ,business.industry ,Oscillation ,Mechanics ,Forward speed effects ,Transverse plane ,Hydrodynamic interaction ,business ,Marine engineering - Abstract
The main objective of this paper is to investigate theoretically and numerically how much interactions are expected between two ships travelling in waves. The theoretical estimation is based on asymptotic far-field wave patterns produced by a translating and oscillating source. The far-field wave pattern is governed by the parameter τ=ωeu0/g; For values of the parameter τ>0.25 there exist a fan-shaped quiescent region in front of the vessel. As τ increases, the range of the fan-shaped quiescent region will be expanded. The critical line between the quiescent and wake region can be estimated by the asymptotic expressions theoretically. It is expected that there is no hydrodynamic interaction if the two ships are located in each other's fan-shaped quiescent region. But due to the near-field local waves produced by the 3-D ships, the critical line could be different from that estimated from asymptotic wave pattern. Therefore, we developed a 3-D panel method based on Rankine-type Green function to investigate the hydrodynamic interaction effects for several combinations of parameters, including oscillation frequency, forward speed and transverse distance between two ships. Finally, the critical line calculated numerically was presented and compared to the theoretical estimation.
- Published
- 2016
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35. The characterisation of the hydrodynamic loads on tidal turbines due to turbulence
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Richard G.J. Flay, Alexander Day, Rajnish N. Sharma, and Ian Milne
- Subjects
Renewable Energy, Sustainability and the Environment ,Turbulence ,business.industry ,020209 energy ,Stall (fluid mechanics) ,02 engineering and technology ,Mechanics ,Turbine ,Model-scale testing ,Standard deviation ,Physics::Fluid Dynamics ,symbols.namesake ,Boundary layer ,Tidal turbine ,0202 electrical engineering, electronic engineering, information engineering ,symbols ,Bending moment ,Environmental science ,Unsteady hydrodynamics ,Geotechnical engineering ,business ,TC ,Tidal power ,Doppler effect - Abstract
An improved characterisation of the hydrodynamic blade loads due to onset turbulence is essential in order to mitigate premature failures, reduce excessive levels of conservativeness and ultimately ensure the commercial viability of tidal turbines. The literature focussing on the turbulence in fast flowing tidal streams and of the unsteady loads that are subsequently imparted to rotors has previously been very limited. However, increased activity in the tidal energy community has led to new investigations and insights which are reported in this paper.It has been found that through the use of acoustic Doppler-based sensors, the streamwise turbulence intensities generally tend to a value of approximately 6–8% at the mid-depth of proposed tidal energy sites. Evidence that the anisotropic structure and scales of the turbulence are more consistent with open-channel-based models than atmospheric-based correlations has also been found. Rapid distortion theory has been applied to estimate that the standard deviation of the streamwise turbulent velocity fluctuations in the onset free-stream flow may be amplified significantly by 15% due to the presence of a turbine. The turbulent fluctuations have also been predicted to remain well correlated over the outer span of the blades at the rotational frequency of the rotor.Recent model-scale experiments have enabled the unsteady hydrodynamic loading to be isolated from the steady-flow loading. For cases where the boundary layer remains primarily attached across the blades, this has enabled linear transfer functions to be developed and applied to model the response to a multi-frequency forcing. It has also been found that phenomena consistent with delayed separation and dynamic stall can result in a blade root bending moment that exceeds the steady value by 25%, and this needs to be taken into account in design to reduce the probability of failure.
- Published
- 2016
- Full Text
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36. Wave-in-deck experiments with focussed waves into a solid deck
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Saishuai Dai, Paul H. Taylor, Alexander Day, E.S. Chan, and H. Santo
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Mechanical Engineering ,02 engineering and technology ,Mechanics ,Integrity assessment ,Impulse (physics) ,Slamming ,01 natural sciences ,Transfer function ,010305 fluids & plasmas ,Deck ,020303 mechanical engineering & transports ,0203 mechanical engineering ,0103 physical sciences ,Impact ,Scaling ,Geology ,Towing - Abstract
This paper examines impact forces resulting from wave-in-deck processes from two separate series of experiments: one with a generic solid deck model, and the other with a combined jacket and deck model, both were conducted with and without an I-beam grillage in-place below the solid deck. A range of inundation levels from 2.1 to 7.1 cm at 1:80 scale is considered. The focus is on global impact forces, which are considered more relevant for integrity assessment of overall bottom-founded structures when survivability is in question and local slamming is not addressed. The objective is to characterise the resultant impact forces as well as to investigate whether there is any interaction between the flows through the jacket and hitting the deck. Focussed wave groups were generated to impinge on the models which were suspended from a carriage over a towing tank. The motion of the support carriage mimics uniform current in-line with the incident waves. Both undisturbed surface elevations as well as impact force time histories were measured. From the first series of tests, a large increase in peak forces as well as high frequency oscillations (force spikes) is observed with the grillage in-place. As soon as the jacket model is in-place for the second series of tests, albeit with a different mounting support arrangement, such a large difference vanishes, which could likely be due to the effect of frequency-dependent transfer functions. We provide experimental evidence of the presence of the jacket in modifying the wave impact on the deck through a significant reduction in the total horizontal impulse. The effects of current on the wave impact forces are also investigated. A simple analytical model based on a momentum argument is used to describe the scaling of horizontal peak force with currents and inundation levels. Finally, the importance of the short duration force spikes as well as vertical impact loads on a real structure at full-scale is discussed based on the same analytical model.
- Published
- 2020
- Full Text
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37. The effect of extreme trim operation on propeller cavitation in self-propulsion conditions
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Matthias Maasch, Osman Turan, Alexander Day, Danışman, Devrim B., Erbaş, Burcu, and Köksal, Çağatay Sabri
- Subjects
VM - Abstract
Experimental and numerical studies have shown that operating an LNG Carrier in extreme bow-up trim conditions can lead to substantial savings of over 25% in nominal ship resistance. The present study applies the Extreme Trim Concept to RANSE self-propulsion simulations including the prediction of propeller cavitation. It was investigated how the transient cavitation location and volume changed with varying ship displacements and trim angles over a range of ship speeds. Further, the effect of extreme trim and cavitation development on the ship delivered power was analysed. Results have shown that by operating an LNG Carrier in extreme trim, power consumption and the extent of cavitation were reduced considerably. This study proved that the Extreme Trim Concept can be a valuable operating approach for reducing the environmental impact of LNG Carriers.
- Published
- 2018
38. Verification and validation of numerical modelling of DTMB 5415 roll decay
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Ermina Begovic, Simone Mancini, Atilla Incecik, Alexander Day, Mancini, Simone, Begovic, Ermina, Day, Alexander H., and Incecik, Atilla
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Environmental Engineering ,Computer science ,VM ,Degrees of freedom (statistics) ,020101 civil engineering ,Ocean Engineering ,Verification and validation (V&V) ,02 engineering and technology ,Time step ,Computational fluid dynamics ,01 natural sciences ,010305 fluids & plasmas ,0201 civil engineering ,Hull ,0103 physical sciences ,Roll decay ,Uncertainty analysis ,DTMB 5415 intact ship ,business.industry ,Uncertainty analysi ,Structural engineering ,Grid ,Grid convergence ,CFD ,business ,EFD ,Verification and validation - Abstract
The paper presents a numerical roll damping assessment of the intact DTMB 5415 naval ship at zero speed. Free model motions from four experimental roll decays with initial heeling angle of 4.0, 13.5, 19.58 and 24.50 deg, performed previously at the University of Strathclyde, Glasgow, have been analysed and the one with 19.58 deg initial heeling has been chosen for the Computational Fluid Dynamic (CFD) analysis. All calculations are performed using CD Adapco Star CCM + software investigating the accuracy and efficiency of the numerical approach for case of high initial heeling angle of bare hull. In the numerical procedure the verification analysis of mesh refinement and time step was performed with the aim to investigate the numerical error/uncertainty. For grid refinement and time step, validation and verification procedure has been performed according to the Grid Convergence Index (GCI) method. Moreover, to verify the main source of the modelling error/uncertainty, the effect of degrees of freedom are evaluated, comparing the numerical results with the experimental results. Conclusions are identifying best practice for roll decay simulations commenting the accuracy of numerical results and required calculation time.
- Published
- 2018
39. A numerical trim methodology study for the Kriso container ship with bulbous bow form variation
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Matthias Maasch, Emil Filipov Shivachev, Alexander Day, Turan, O., Kujala, Pentti, and Lu, Liangliang
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VM - Abstract
The application of Computational Fluid Dynamics (CFD) is the fastest developing area in marine fluid dynamics as an alternative to Experimental Fluid Dynamics (EFD). While EFD employs well-established methods for predicting a ship's performance, CFD is still challenged to reach a reliable level of accuracy in a reasonable amount of time. In the present study, this issue is addressed in the context of trim optimization by exploring the combination of time-inexpensive potential flow simulations with high-fidelity Unsteady Reynolds-averaged Navier-Stokes (URANS) simulations. This approach allowed covering a broad fore body design space by running a large number of potential flow simulations while at the same time important flow effects due to viscous forces were included by running URANS simulations over the full speed range for a small set of simulations. The KCS baseline design results were validated against an experimental towing tank dataset ensuring a valid CFD setup and thus demonstrating its competitiveness to EFD.
- Published
- 2018
40. Experimental investigation on stability of intact and damaged combatant ship in beam sea
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Saishuai Dai, Evangelos Boulougouris, Alexander Day, and Yue Gu
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business.industry ,Mechanical Engineering ,VM ,020101 civil engineering ,Ocean Engineering ,02 engineering and technology ,Computational fluid dynamics ,01 natural sciences ,Stability (probability) ,010305 fluids & plasmas ,0201 civil engineering ,Nonlinear system ,Stern ,Beam (nautical) ,Model testing ,Hull ,0103 physical sciences ,business ,Double bottom ,Geology ,Marine engineering - Abstract
The stability of the damaged ship is influenced by several factors including the encountered waves and its response to them, the floodwater behaviour and its interaction with the ship’s motions. The behaviour of floodwater is highly nonlinear and therefore the model testing is one of the best ways to assess the actual behaviour of the damaged ship. The present study addresses mainly the experimental study of the stability in intact and damage condition of a combatant vessel in beam waves. The tests were carried out at the Kelvin Hydrodynamics Laboratory of the University of Strathclyde, using a model of the well-known DTMB 5415, equipped with a double bottom. A 1/51-scale model was used. Free rolling decay tests with and without restricted constraint were implemented in calm water, with the model restrained at the bow and stern during the wave excited oscillation tests. In order to investigate the performance of the damaged ship, an opening was made at the starboard side near the midship through which two internal compartments were flooded. The obtained results show how in the damage condition and the floodwater dynamics the compartments impact on the motion responses of the ship and forces acting on the ship’s hull. Nonlinear behaviour of the RAOs of all tests are given to provide the benchmark results for prediction with CFD methods further.
- Published
- 2018
41. Energy efficient ship operation through speed optimisation in various weather conditions
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Benjamin Howett, Ruihua Lu, Yigit Kemal Demirel, Tong Cui, Atilla Incecik, Alexander Day, Osman Turan, Mingyu Kim, Olcer, Aykut, Kitada, M., Dalaklis, D., and Ballini, F.
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Weather routing ,Computer science ,Process (engineering) ,VM ,Fuel efficiency ,Routing (electronic design automation) ,Speed management ,Automotive engineering ,Efficient energy use - Abstract
Speed optimisation or speed management has been an attractive topic in the shipping industry for a long time. Traditional methods rely on masters’ experience. Some recent methods are more efficient but have many constraints, which preclude obtaining an optimum speed profile. This paper introduces a relatively advanced model for global speed optimisation towards energy efficient shipping in various weather conditions and shows the effect when the method is employed. With this model, if a ship type, departure and destination ports and fixed ETA (Estimated Time Arrival) are given, the stakeholders can be provided with a more reasonable speed operation plan for a certain commercial route, which leads to lower fuel consumption. Weather conditions and, hence, routing plays a very important role in this process. Several case studies over different shipping conditions are considered to validate the model.
- Published
- 2018
42. Wave-Current Blockage: Reduced Forces for the Re-Assessment of Ageing Space-Frame Offshore Structures
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Paul H. Taylor, H. Santo, Alexander Day, Yoo Sang Choo, and E. Nixon
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Drag coefficient ,business.industry ,VM ,media_common.quotation_subject ,05 social sciences ,Mechanics ,Computational fluid dynamics ,Inertia ,01 natural sciences ,010305 fluids & plasmas ,Morison equation ,Flow velocity ,Structural load ,Drag ,0502 economics and business ,0103 physical sciences ,Fluid dynamics ,business ,050203 business & management ,Geology ,media_common - Abstract
This paper summarises extensive research work on the accurate calculation of extreme loads from waves and current on space-frame offshore structures. Although relevant to new builds, improved prediction of extreme loads is also key to the re-assessment of old and ageing offshore platforms.Current blockage is a field effect. Due to the presence of the rest of the structure, the flow velocity on each structural member is reduced on average leading to smaller overall loads. The first model to account for this ‘current blockage’ was first proposed by Taylor [1], and incorporated into standard industry practice (API, DNV and ISO). This is a simple improvement to the original Morison equation (Morison et al. [2]), which predicts forces using the undisturbed open ocean flow properties.New work shows that unsteady large waves on top of a steady current introduces additional blockage, interpreted as wave-current blockage. Large-scale laboratory experiments have been used to validate numerical force calculations. This paper describes a numerical Computational Fluid Dynamics (CFD) model of a porous block with embedded Morison drag and inertia stresses distributed over the enclosed volume of the space-frame as a global representation. At a local member scale, the standard Morison equation is used, but on the local flow. This local flow speed is reduced because of overall interaction between the structural members interpreted as resulting from a distributed array of obstacle. Since the Morison equation is semi-empirical, drag and inertia coefficients are still required, consistent with present industry practice. This new method should be useful for assessing the overall structural load resistance and integrity in extreme wave and current conditions when survivability is in question.Results are presented from recent large-scale experiments on a scaled (1:80) jacket model in the Kelvin Hydrodynamics Laboratory in Glasgow. These tests cover force measurements on both a jacket (stiff, statically-responding) and the same model restrained on springs to mimic structural dynamics (the first mode of a deep-water jacket, the second mode of a compliant tower or the first mode of a jack-up). For a jacket structure under all range of wave and current conditions, only a single pair of values of Morison drag and inertia coefficients is required to reproduce the complete total force-time histories on the jacket model. This is in contrast to the present industry practice whereby different Morison drag coefficients are required in order to fit the measured peak forces over the wide range of cases considered. For the dynamic tests, we find that the relative velocity formulation of the Morison equation for space-frame structures is valid for dynamically sensitive structures. All of these effects can be captured using our numerical porous block model.
- Published
- 2018
- Full Text
- View/download PDF
43. A mixed-method optimisation and simulation framework for supporting logistical decisions during offshore wind farm installations
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Diclehan Tezcaner Öztürk, Kerem Akartunali, Evangelos Boulougouris, Matthew Revie, Euan Barlow, and Alexander Day
- Subjects
Schedule ,Information Systems and Management ,General Computer Science ,Process (engineering) ,Computer science ,020209 energy ,Operations Research & Management Science ,TK ,020208 electrical & electronic engineering ,02 engineering and technology ,Management Science and Operations Research ,Asset (computer security) ,Investment (macroeconomics) ,Industrial engineering ,Industrial and Manufacturing Engineering ,Management ,Offshore wind power ,Modeling and Simulation ,Component (UML) ,Business & Economics ,0202 electrical engineering, electronic engineering, information engineering ,HD28 ,Operations management ,Duration (project management) - Abstract
With a typical investment in excess of 100 million for each project, the installation phase of offshore wind farms (OWFs) is an area where substantial cost-reductions can be achieved; however, to-date there have been relatively few studies exploring this. In this paper, we develop a mixed-method framework which exploits the complementary strengths of two decision-support methods: discrete-event simulation and robust optimisation. The simulation component allows developers to estimate the impact of user defined asset selections on the likely cost and duration of the full or partial completion of the installation process. The optimisation component provides developers with an installation schedule that is robust to changes in operation durations due to weather uncertainties. The combined framework provides a decision-support tool which enhances the individual capability of both models by feedback channels between the two, and provides a mechanism to address current OWF installation projects. The combined framework, verified and validated by external experts, was applied to an installation case study to illustrate the application of the combined approach. An installation schedule was identified which accounted for seasonal uncertainties and optimised the ordering of activities. (C) 2017 Elsevier B.V. All rights reserved. University of Strathclyde Technology and Innovation Centre
- Published
- 2018
44. Tidal energy 'Round Robin' tests comparisons between towing tank and circulating tank results
- Author
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M. Costanzo, Jean-Valery Facq, Benoît Gaurier, E. Nixon, F. Di Felice, Alexander Day, Cameron Johnstone, Grégory Germain, and Andrew Grant
- Subjects
Engineering ,"Round Robin" test ,Environmental Engineering ,Experimental Trials ,VM ,Ocean Engineering ,Thrust ,Inflow ,Environmental Science (miscellaneous) ,”Round Robin” Test ,Turbine ,Experimental trials ,Horizontal axis marine turbine ,Marine Current Energy ,Torque ,Towing ,Water Science and Technology ,business.industry ,Mechanical Engineering ,Marine current energy ,Drag ,Horizontal Axis Marine Turbine ,Round robin test ,business ,Tidal power ,Marine engineering - Abstract
One key step of the industrial development of a tidal energy device is the testing of scale prototype devices within a controlled laboratory environment. At present, there is no available experimental protocol which addresses in a quantitative manner the differences which can be expected between results obtained from the different types of facilities currently employed for this type of testing. As a consequence, where differences between results are found it has been difficult to confirm the extent to which these differences relate to the device performance or to the test facility type. In the present study, a comparative “Round Robin” testing programme has been conducted as part of the EC FP VII MaRINET program in order to evaluate the impact of different experimental facilities on the test results. The aim of the trials was to test the same model tidal turbine in four different test facilities to explore the sensitivity of the results to the choice of facility. The facilities comprised two towing tanks, of very different size, and two circulating water channels. Performance assessments in terms of torque, drag and inflow speed showed very similar results in all facilities. However, expected differences between the different tank types (circulating and towing) were observed in the fluctuations of torque and drag measurements. The main facility parameters which can influence the behaviour of the turbine were identified; in particular the effect of blockage was shown to be significant in cases yielding for high thrust coefficients, even at relatively small blockage ratios.
- Published
- 2015
- Full Text
- View/download PDF
45. Hydrodynamic modelling of marine renewable energy devices: A state of the art review
- Author
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F. Salvatore, Aurélien Babarit, Yan Ping He, Motohiko Murai, M Kraskowski, A Fontaine, Alexander Day, Irene Penesis, Hyunkyoung Shin, University of Strathclyde [Glasgow], Laboratoire de recherche en Hydrodynamique, Énergétique et Environnement Atmosphérique (LHEEA), École Centrale de Nantes (ECN)-Centre National de la Recherche Scientifique (CNRS), Pennsylvania State University (Penn State), Penn State System, Shanghai Jiao Tong University [Shanghai], Centrum Techniki Okrętowej, Yokohama National University, Australian Maritime College (AMC), University of Tasmania [Hobart, Australia] (UTAS), Istituto Nazionale per Studi ed Esperienze di Architettura Navale, and University of Ulsan
- Subjects
Engineering ,Environmental Engineering ,VM ,020209 energy ,Ocean Engineering ,Context (language use) ,02 engineering and technology ,7. Clean energy ,01 natural sciences ,[SPI.MECA.MEFL]Engineering Sciences [physics]/Mechanics [physics.med-ph]/Fluids mechanics [physics.class-ph] ,010305 fluids & plasmas ,0103 physical sciences ,0202 electrical engineering, electronic engineering, information engineering ,Performance prediction ,Hydrodynamic modelling ,Power take-off ,Marine renewable energy ,Towing ,business.industry ,[SPI.NRJ]Engineering Sciences [physics]/Electric power ,Wind engineering ,Renewable energy ,Offshore wind power ,13. Climate action ,Marine renewableenergy ,business ,Tidal power ,Marine engineering - Abstract
International audience; This paper reviews key issues in the physical and numerical modelling of marine renewable energy systems, including wave energy devices, current turbines, and offshore wind turbines. The paper starts with an overview of the types of devices considered, and introduces some key studies in marine renewable energy modelling research. The development of new International Towing Tank Conference (ITTC) guidelines for model testing these devices is placed in the context of guidelines developed or under development by other international bodies as well as via research projects. Some particular challenges are introduced in the experimental and numerical modelling and testing of these devices, including the simulation of Power-Take-Off systems (PTOs) for physical models of all devices, approaches for numerical modelling of devices, and the correct modelling of wind load on offshore wind turbines. Finally, issues related to the uncertainty in performance prediction from model test results are discussed.The paper is based on the report of the International Towing Tank Conference specialist committee on Hydrodynamic Modelling of Marine Renewable Energy Devices to the 27th ITTC held in Copenhagen, Denmark in 2014 (ITTC Specialist Committee on Hydrodynamic Modelling of Marine Renewable Energy Devices, 2014a. Final Report and Recommendations to the 27th ITTC Proc. 27th International Towing Tank Conference, Copehagen, Denmark, vol. 2, pp. 680–725).
- Published
- 2015
- Full Text
- View/download PDF
46. Trim Influence on Kriso Container Ship (KCS): An Experimental and Numerical Study
- Author
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Alexander Day, Emil Shivachev, and Mahdi Khorasanchi
- Subjects
Ballast ,Keel ,business.industry ,Computer science ,VM ,Hull ,Transom ,Computational fluid dynamics ,business ,Bulbous bow ,Towing ,Trim ,Marine engineering - Abstract
There has been a lot of interest in trim optimisation to reduce fuel consumption and emissions of ships. Many existing ships are designed for a single operational condition with the aim of producing low resistance at their design speed and draft with an even keel. Given that a ship will often sail outside this condition over its operational life and moreover some vessels such as LNG carriers return in ballast condition in one leg, the effect of trim on ships resistance will be significant. Ship trim optimization analysis has traditionally been done through towing tank testing. Computational techniques have become increasingly popular for design and optimization applications in all engineering disciplines. Computational Fluid Dynamics (CFD), is the fastest developing area in marine fluid dynamics as an alternative to model tests. High fidelity CFD methods are capable of modelling breaking waves which is especially crucial for trim optimisation studies where the bulbous bow partially emerges or the transom stern partially immerses. This paper presents a trim optimization study on the Kriso Container Ship (KCS) using computational fluid dynamics (CFD) in conjunction with towing tank tests. A series of resistance tests for various trim angles and speeds were conducted at 1:75 scale at design draft. CFD computations were carried out for the same conditions with the hull both fixed and free to sink and trim. Dynamic sinkage and trim add to the computational cost and thus slow the optimisation process. The results obtained from CFD simulations were in good agreement with the experiments. After validating the applicability of the computational model, the same mesh, boundary conditions and solution techniques were used to obtain resistance values for different trim conditions at different Froude numbers. Both the fixed and free trim/sinkage models could predict the trend of resistance with variation of trim angles; however the fixed model failed to measure the absolute values as accurately as the free model. It was concluded that a fixed CFD model, although computationally faster and cheaper, can find the optimum trim angle but cannot predict the amount of savings with very high accuracy. Results concerning the performance of the vessel at different speeds and trim angles were analysed and optimum trim is suggested.
- Published
- 2017
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47. Two-degree-of-freedom VIV of circular cylinder with variable natural frequency ratio: Experimental and numerical investigations
- Author
-
Hossein Zanganeh, Narakorn Srinil, and Alexander Day
- Subjects
Engineering ,Damping ratio ,Environmental Engineering ,Oscillation ,business.industry ,VM ,Reynolds number ,Ocean Engineering ,Natural frequency ,Mechanics ,Structural engineering ,Physics::Fluid Dynamics ,Vibration ,symbols.namesake ,Amplitude ,Vortex-induced vibration ,symbols ,Cylinder ,business - Abstract
Slender offshore structures possess multiple natural frequencies in different directions which can lead to different resonance conditions when undergoing vortex-induced vibration (VIV). This paper presents an experimental and numerical investigation of a two-degree-of-freedom VIV of a flexibly mounted circular cylinder with variable in-line-to-cross-flow natural frequency ratio. A mechanical spring-cylinder system, achieving a low equivalent mass ratio in both in-line and cross-flow directions, is tested in a water towing tank and subject to a uniform steady flow in a sub-critical Reynolds number range of about 2×103–5×104. A generalized numerical prediction model is based on the calibrated Duffing-van der Pol (structure-wake) oscillators which can capture the structural geometrical coupling and fluid-structure interaction effects through system cubic and quadratic nonlinearities. Experimental results for six measurement datasets are compared with numerical results in terms of response amplitudes, lock-in ranges, oscillation frequencies, time-varying trajectories and phase differences of cross-flow/in-line motions. Some good qualitative agreements are found which encourage the use of the implemented numerical model subject to calibration and the sensitivity analysis of empirical coefficients. Moreover, comparisons of the newly-obtained and published experimental results are carried out and discussed, highlighting a good correspondence in both amplitude and frequency responses. Various patterns of figure-of-eight orbital motions associated with dual two-to-one resonances are observed experimentally as well as numerically: the forms of trajectories are noticed to depend on the system mass ratio, damping ratio, reduced velocity parameter and natural frequency ratio of the two-dimensional oscillating cylinder.
- Published
- 2013
- Full Text
- View/download PDF
48. Experimental assessment of intact and damaged ship motions in head, beam and quartering seas
- Author
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Atilla Incecik, Alexander Day, Ermina Begovic, G. Mortola, Begovic, Ermina, Mortola, G., Incecik, A., and Day, A. H.
- Subjects
intact ship motions, damaged ship motions, free drift test ,Engineering ,Environmental Engineering ,Head (watercraft) ,geosim models ,Scale (ratio) ,business.industry ,Ocean Engineering ,Structural engineering ,Sea state ,Capsizing ,Ship motions ,Beam (nautical) ,Free drift ,Hull ,damage opening orientation ,business ,Marine engineering - Abstract
This paper presents an extensive study on the experimental prediction of motions for the well-known 5415 frigate hull in intact and damaged conditions. The experimental campaign is conducted for two geosim models, 1/100 and 1/51 scale, at zero speed in head, beam and quartering seas. All experimental results for 1/51 model are presented as 1st and 2nd order RAO, commenting on physical reasons for second order response occurrences. The results show the changes in motion responses when a ship hull is in damaged condition, they highlight the model scale effects and demonstrate the comparisons between the tests in which the model may freely drift and those in which the mean position of the model is restrained. For damaged ship in free drift tests the damage opening orientation is varied and its effect on RAO and free drift velocity is commented.
- Published
- 2013
- Full Text
- View/download PDF
49. Blade loads on tidal turbines in planar oscillatory flow
- Author
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Richard G.J. Flay, Alexander Day, Ian Milne, and Rajnish N. Sharma
- Subjects
Physics ,Environmental Engineering ,business.industry ,Turbulence ,Ocean Engineering ,Stall (fluid mechanics) ,Structural engineering ,Mechanics ,Wake ,Physics::Fluid Dynamics ,Flow separation ,Planar ,Bending moment ,business ,Tidal power ,Added mass - Abstract
Characterisation of the unsteady hydrodynamic loads is essential for accurate predictions of the fatigue life and ultimate loads of tidal turbine blades. This paper analyses a set of experimental tests of the hydrodynamic blade root out-of-plane bending moment response to planar oscillatory motion, chosen as an idealised representation of the unsteadiness imparted by waves and turbulence. Phenomena associated with dynamic stall are observed which are sensitive to the oscillatory frequency and velocity amplitude. Flow separation is shown to result in loads significantly greater in magnitude than that for steady flow. Following flow reattachment, the load cycles compare relatively well with Theodorsen's theory for a two-dimensional foil oscillating in heave, suggesting that circulation due to the shed wake dominates the unsteadiness in phase with acceleration, over added mass effects. For attached flow, the effect of unsteadiness is comparatively much smaller. At low frequencies a phase lead over the velocity is observed, compared to a lag at higher frequencies. Multiple frequency oscillations are also briefly considered. Reconstruction of the multi-frequency response using both the steady flow measurements, and the single frequency measured response, is shown to offer a relatively good fit when the flow is attached, for lower frequency combinations.
- Published
- 2013
- Full Text
- View/download PDF
50. MODERATE-COST APPROACHES FOR HYDRODYNAMIC TESTING OF HIGH PERFORMANCE SAILING VESSELS
- Author
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Alexander Day, Cameron, P., Edward Nixon, Bot, Patrick, Patrick Bot, University of Strathclyde [Glasgow], and CVET and Ecole Navale
- Subjects
VM ,[SPI.MECA.MEFL] Engineering Sciences [physics]/Mechanics [physics.med-ph]/Fluids mechanics [physics.class-ph] ,[SPI.MECA.MEFL]Engineering Sciences [physics]/Mechanics [physics.med-ph]/Fluids mechanics [physics.class-ph] - Abstract
International audience; This study examines the relative merits of physical testing techniques which may be used in early stage design for assessment of the resistance of high-performance sailing vessels. The hull chosen as a benchmark form is a high-speed hard-chine sailing dinghy. The hull proportions and shape are typical of modern trends in skiff design, but may also be considered to be broadly similar to some high performance yacht hulls. The 4.55m hull was tested at full scale in a moderate size towing tank, at 1:2.5 scale in the same tank, and at full-scale by towing on open water. Results show the mean discrepancy in the measured resistance between the open water towing and the full-scale tank test is around 4%. The challenges of full-scale open-water testing are discussed and several improvements identified for future work. Comparison of the full-scale results suggests that blockage and depth correction for the full-scale hull in the tank do not present a substantial problem for subcritical speeds. Larger discrepancies were found between resistance from the model scale and the full scale tank tests at higher speeds; it was speculated that these discrepancies relate to the differences in the detailed geometry of the model and full-scale boat, particularly in the region of the chines.
- Published
- 2017
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