1. Elucidating the role of liver enzymes as markers and regulators in ovarian cancer: a synergistic approach using Mendelian randomization, single-cell analysis, and clinical evidence.
- Author
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Zhu Y, Jiang M, Gu Z, Shang H, Tang C, and Guo T
- Subjects
- Humans, Female, WAP Four-Disulfide Core Domain Protein 2 genetics, WAP Four-Disulfide Core Domain Protein 2 metabolism, Aspartate Aminotransferases genetics, Aspartate Aminotransferases blood, Liver pathology, Liver metabolism, Alanine Transaminase blood, Alanine Transaminase genetics, gamma-Glutamyltransferase genetics, gamma-Glutamyltransferase blood, CA-125 Antigen genetics, Gene Expression Regulation, Neoplastic genetics, Transcription Factors genetics, Transcription Factors metabolism, Membrane Proteins genetics, Middle Aged, Ovarian Neoplasms genetics, Ovarian Neoplasms pathology, Polymorphism, Single Nucleotide genetics, Mendelian Randomization Analysis, Single-Cell Analysis methods, Genome-Wide Association Study, Alkaline Phosphatase genetics, Alkaline Phosphatase blood, Biomarkers, Tumor genetics
- Abstract
Objective: To investigate the association between liver enzymes and ovarian cancer (OC), and to validate their potential as biomarkers and their mechanisms in OC. Methods Genome-wide association studies for OC and levels of enzymes such as Alkaline phosphatase (ALP), Aspartate aminotransferase (AST), Alanine aminotransferase, and gamma-glutamyltransferase were analyzed. Univariate and multivariate Mendelian randomization (MR), complemented by the Steiger test, identified enzymes with a potential causal relationship to OC. Single-cell transcriptomics from the GSE130000 dataset pinpointed pivotal cellular clusters, enabling further examination of enzyme-encoding gene expression. Transcription factors (TFs) governing these genes were predicted to construct TF-mRNA networks. Additionally, liver enzyme levels were retrospectively analyzed in healthy individuals and OC patients, alongside the evaluation of correlations with cancer antigen 125 (CA125) and Human Epididymis Protein 4 (HE4)., Results: A total of 283 single nucleotide polymorphisms (SNPs) and 209 SNPs related to ALP and AST, respectively. Using the inverse-variance weighted method, univariate MR (UVMR) analysis revealed that ALP (P = 0.050, OR = 0.938) and AST (P = 0.017, OR = 0.906) were inversely associated with OC risk, suggesting their roles as protective factors. Multivariate MR (MVMR) confirmed the causal effect of ALP (P = 0.005, OR = 0.938) on OC without reverse causality. Key cellular clusters including T cells, ovarian cells, endothelial cells, macrophages, cancer-associated fibroblasts (CAFs), and epithelial cells were identified, with epithelial cells showing high expression of genes encoding AST and ALP. Notably, TFs such as TCE4 were implicated in the regulation of GOT2 and ALPL genes. OC patient samples exhibited decreased ALP levels in both blood and tumor tissues, with a negative correlation between ALP and CA125 levels observed., Conclusion: This study has established a causal link between AST and ALP with OC, identifying them as protective factors. The increased expression of the genes encoding these enzymes in epithelial cells provides a theoretical basis for developing novel disease markers and targeted therapies for OC., (© 2024. The Author(s).)
- Published
- 2024
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