34 results on '"Alain Bizzini"'
Search Results
2. First case of Candida auris in Switzerland: discussion about preventive strategies
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Arnaud Riat, Dionysios Neofytos, Alix T. Coste, Stephan Harbarth, Alain Bizzini, Bruno Grandbastien, Jerome Pugin, and Frederic Lamoth
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outbreak ,Infection Control ,invasive candidiasis ,candidemia ,antifungal resistance ,Medicine - Published
- 2018
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3. Large-scale screening of a targeted Enterococcus faecalis mutant library identifies envelope fitness factors.
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Lionel Rigottier-Gois, Adriana Alberti, Armel Houel, Jean-François Taly, Philippe Palcy, Janet Manson, Daniela Pinto, Renata C Matos, Laura Carrilero, Natalia Montero, Muhammad Tariq, Harma Karsens, Christian Repp, Andrea Kropec, Aurélie Budin-Verneuil, Abdellah Benachour, Nicolas Sauvageot, Alain Bizzini, Michael S Gilmore, Philippe Bessières, Jan Kok, Johannes Huebner, Fatima Lopes, Bruno Gonzalez-Zorn, Axel Hartke, and Pascale Serror
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Medicine ,Science - Abstract
Spread of antibiotic resistance among bacteria responsible for nosocomial and community-acquired infections urges for novel therapeutic or prophylactic targets and for innovative pathogen-specific antibacterial compounds. Major challenges are posed by opportunistic pathogens belonging to the low GC% gram-positive bacteria. Among those, Enterococcus faecalis is a leading cause of hospital-acquired infections associated with life-threatening issues and increased hospital costs. To better understand the molecular properties of enterococci that may be required for virulence, and that may explain the emergence of these bacteria in nosocomial infections, we performed the first large-scale functional analysis of E. faecalis V583, the first vancomycin-resistant isolate from a human bloodstream infection. E. faecalis V583 is within the high-risk clonal complex 2 group, which comprises mostly isolates derived from hospital infections worldwide. We conducted broad-range screenings of candidate genes likely involved in host adaptation (e.g., colonization and/or virulence). For this purpose, a library was constructed of targeted insertion mutations in 177 genes encoding putative surface or stress-response factors. Individual mutants were subsequently tested for their i) resistance to oxidative stress, ii) antibiotic resistance, iii) resistance to opsonophagocytosis, iv) adherence to the human colon carcinoma Caco-2 epithelial cells and v) virulence in a surrogate insect model. Our results identified a number of factors that are involved in the interaction between enterococci and their host environments. Their predicted functions highlight the importance of cell envelope glycopolymers in E. faecalis host adaptation. This study provides a valuable genetic database for understanding the steps leading E. faecalis to opportunistic virulence.
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- 2011
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4. Fungicidal activity of copper-sputtered flexible surfaces under dark and actinic light against azole-resistant Candida albicans and Candida glabrata
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Alain Bizzini, Sami Rtimi, John Kiwi, Cesar Pulgarin, José M. Entenza, and Myriam K. S. Ballo
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Azoles ,0301 basic medicine ,Antifungal Agents ,Diffuse reflectance infrared fourier transform ,Surface Properties ,Polyesters ,030106 microbiology ,Biophysics ,chemistry.chemical_element ,02 engineering and technology ,Microbiology ,03 medical and health sciences ,Drug Resistance, Fungal ,Candida albicans ,Radiology, Nuclear Medicine and imaging ,chemistry.chemical_classification ,Radiation ,Radiological and Ultrasound Technology ,biology ,Candida glabrata ,Chemistry ,Cell Membrane ,Darkness ,021001 nanoscience & nanotechnology ,biology.organism_classification ,Fluorescence ,Copper ,Corpus albicans ,Fungicide ,Azole ,0210 nano-technology - Abstract
Candida spp. are able to survive on hospital surfaces and causes healthcare-associated infections (HCAIs). Since surface cleaning and disinfecting interventions are not totally effective to eliminate Candida spp., new approaches should be devised. Copper (Cu) has widely recognized antifungal activity and the use of Cu-sputtered surfaces has recently been proposed to curb the spread of HCAIs. Moreover, the activity of Cu under the action of actinic light remains underexplored. We investigated the antifungal activity of Cu-sputtered polyester surfaces (Cu-PES) against azole-resistant Candida albicans and Candida glabrata under dark and low intensity visible light irradiation (4.65 mW/cm2). The surface properties of Cu-PES photocatalysts were characterized by diffuse reflectance spectroscopy (DRS) and X-ray fluorescence (XRF). Under dark, Cu-PES showed a fungicidal activity (≥ 3 log10 CFU reduction of the initial inoculum) against both C. albicans DSY296 and C. glabrata DSY565 leading to a reduction of the starting inoculum of 3.1 and 3.0 log10 CFU, respectively, within 60 min of exposure. Under low intensity visible light irradiation, Cu-PES exhibited an accelerated fungicidal activity against both strains with a reduction of 3.0 and 3.4 log10 CFU, respectively, within 30 min of exposure. This effect was likely due to the semiconductor Cu2O/CuO charge separation. The decrease in cell viability of the two Candida strains under dark and light conditions correlated with the progressive loss of membrane integrity. These results indicate that Cu-PES represent a promising strategy for decreasing the colonization of surfaces by yeasts and that actinic light can improve its self-disinfecting activity.
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- 2017
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5. In Vitro and In Vivo Effectiveness of an Innovative Silver-Copper Nanoparticle Coating of Catheters To Prevent Methicillin-Resistant Staphylococcus aureus Infection
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Cesar Pulgarin, José M. Entenza, Nancy B. Hopf, Aurélie Berthet, Sami Rtimi, John Kiwi, Alain Bizzini, Philippe Moreillon, and Myriam K. S. Ballo
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Methicillin-Resistant Staphylococcus aureus ,0301 basic medicine ,medicine.medical_specialty ,Silver ,medicine.medical_treatment ,Polyurethanes ,030106 microbiology ,Colony Count, Microbial ,Bacteremia ,Staphylococcal infections ,medicine.disease_cause ,Fibrin ,Microbiology ,03 medical and health sciences ,Catheters, Indwelling ,0302 clinical medicine ,Anti-Infective Agents ,Coated Materials, Biocompatible ,In vivo ,medicine ,Animals ,Experimental Therapeutics ,Pharmacology (medical) ,030212 general & internal medicine ,Saline ,Pharmacology ,biology ,Chemistry ,Catheters ,Copper ,Staphylococcal Infections ,medicine.disease ,Methicillin-resistant Staphylococcus aureus ,Rats ,3. Good health ,Surgery ,Catheter ,Infectious Diseases ,Staphylococcus aureus ,biology.protein ,Nanoparticles ,Adsorption ,Jugular Veins - Abstract
In this study, silver/copper (Ag/Cu)-coated catheters were investigated for their efficacy in preventing methicillin-resistant Staphylococcus aureus (MRSA) infection in vitro and in vivo . Ag and Cu were sputtered (67/33% atomic ratio) on polyurethane catheters by direct-current magnetron sputtering. In vitro , Ag/Cu-coated and uncoated catheters were immersed in phosphate-buffered saline (PBS) or rat plasma and exposed to MRSA ATCC 43300 at 10 4 to 10 8 CFU/ml. In vivo , Ag/Cu-coated and uncoated catheters were placed in the jugular vein of rats. Directly after, MRSA (10 7 CFU/ml) was inoculated in the tail vein. Catheters were removed 48 h later and cultured. In vitro , Ag/Cu-coated catheters preincubated in PBS and exposed to 10 4 to 10 7 CFU/ml prevented the adherence of MRSA (0 to 12% colonization) compared to uncoated catheters (50 to 100% colonization; P < 0.005) and Ag/Cu-coated catheters retained their activity (0 to 20% colonization) when preincubated in rat plasma, whereas colonization of uncoated catheters increased (83 to 100%; P < 0.005). Ag/Cu-coating protection diminished with 10 8 CFU/ml in both PBS and plasma (50 to 100% colonization). In vivo , Ag/Cu-coated catheters reduced the incidence of catheter infection compared to uncoated catheters (57% versus 79%, respectively; P = 0.16) and bacteremia (31% versus 68%, respectively; P < 0.05). Scanning electron microscopy of explanted catheters suggests that the suboptimal activity of Ag/Cu catheters in vivo was due to the formation of a dense fibrin sheath over their surface. Ag/Cu-coated catheters thus may be able to prevent MRSA infections. Their activity might be improved by limiting plasma protein adsorption on their surfaces.
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- 2016
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6. Streptococcus anginosus and Coxiella burnetii vascular graft co-infection
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Alain Bizzini and Sybille Dvorak
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0301 basic medicine ,Fistula ,030106 microbiology ,Infectious and parasitic diseases ,RC109-216 ,Vascular graft ,Article ,Microbiology ,03 medical and health sciences ,0302 clinical medicine ,medicine ,030212 general & internal medicine ,biology ,business.industry ,Pyogenic ,bacterial infections and mycoses ,Coxiella burnetii ,biology.organism_classification ,medicine.disease ,Intracellular ,Infectious Diseases ,Streptococcus anginosus ,bacteria ,business ,Co infection - Abstract
Vascular graft infections are rare complications, usually associated with a monomicrobial pyogenic culture. We report a case of vascular graft co-infection with Streptococcus anginosus and Coxiella burnetii, complicated by an aorto-duodenal fistula. Screening for chronic C. burnetii co-infection in at-risk patients might prevent adverse long-term outcomes. Keywords: Vascular graft, Intracellular, Pyogenic, Coxiella burnetii, Streptococcus anginosus
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- 2020
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7. Duality in the Escherichia coli and methicillin resistant Staphylococcus aureus reduction mechanism under actinic light on innovative co-sputtered surfaces
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Cesar Pulgarin, Rosendo Sanjines, Alain Bizzini, José M. Entenza, Sami Rtimi, M. K. S. Ballo, John Kiwi, and Danièle Laub
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Diffuse reflectance infrared fourier transform ,Chemistry ,Oligodynamic effect ,Process Chemistry and Technology ,Kinetics ,Analytical chemistry ,medicine.disease_cause ,Fluorescence ,Catalysis ,Sputtering ,Transmission electron microscopy ,Staphylococcus aureus ,medicine ,Escherichia coli - Abstract
The kinetics of bacterial reduction of Staphylococcus aureus (MRSA) on co-sputtered TiO2/Cu-polyester (TiO2/Cu-PES) was found to be little dependent on the applied light dose. But in the case of Escherichia coil, the bacterial reduction kinetics was observed to be strongly dependent on the applied light dose. The reasons for the different effect of the applied light dose on the bacterial reduction are discussed. Mechanistic considerations are suggested to account for this observation.TiO2/Cu-PES obtained by direct current magnetron co-sputtering and the bacterial reduction features compared to PES sputtered individually by TiO2 and Cu. This study presents the first evidence for the stabilizing effect of TiO2 on the amounts of the Cu released during bacterial inactivation by co-sputtered surfaces compared to sequential sputtering of Ti and/or Cu on PES. The release of Cu-monitored in the ppb range by inductively coupled plasma-mass spectrometry (ICP-MS) is indicative of an oligodynamic effect leading to bacterial reduction. The bacterial reduction of MRSA ATCC 43300 on co-sputtered TiO2/Cu led to a 5 log(10) (99.999%) reduction within 120 min in the dark and 60 min under low intensity actinic light. Diffuse reflectance spectroscopy (DRS), transmission electron microscopy (TEM) and X-ray fluorescence (XRF) describe the TiO2/Cu surfaces investigated in this study. (C) 2015 Elsevier B.V. All rights reserved.
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- 2015
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8. Acute Schistosomiasis: A Risk Underestimated by Travelers and a Diagnosis Frequently Missed by General Practitioners—A Cluster Analysis of 42 Travelers
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Serge de Vallière, Blaise Genton, Laurence Rochat, Nicolas Senn, Alain Bizzini, and Pierre-Yves Bochud
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Adult ,Male ,Health Knowledge, Attitudes, Practice ,Pediatrics ,medicine.medical_specialty ,Adolescent ,Fever ,Bathing ,Prevalence ,Fresh Water ,Schistosomiasis ,Disease cluster ,Risk Assessment ,Praziquantel ,General Practitioners ,Surveys and Questionnaires ,Eosinophilia ,Epidemiology ,Madagascar ,medicine ,Animals ,Cluster Analysis ,Humans ,Aged ,Travel ,business.industry ,Outbreak ,Waterborne diseases ,General Medicine ,Middle Aged ,medicine.disease ,Surgery ,Acute Disease ,Female ,medicine.symptom ,business ,human activities - Abstract
In 2011, a patient was admitted to our hospital with acute schistosomiasis after having returned from Madagascar and having bathed at the Lily waterfalls. On the basis of this patient's indication, infection was suspected in 41 other subjects. This study investigated (1) the knowledge of the travelers about the risks of schistosomiasis and their related behavior to evaluate the appropriateness of prevention messages and (2) the diagnostic workup of symptomatic travelers by general practitioners to evaluate medical care of travelers with a history of freshwater exposure in tropical areas.; A questionnaire was sent to the 42 travelers with potential exposure to schistosomiasis. It focused on pre-travel knowledge of the disease, bathing conditions, clinical presentation, first suspected diagnosis, and treatment.; Of the 42 questionnaires, 40 (95%) were returned, among which 37 travelers (92%) reported an exposure to freshwater, and 18 (45%) were aware of the risk of schistosomiasis. Among these latter subjects, 16 (89%) still reported an exposure to freshwater. Serology was positive in 28 (78%) of 36 exposed subjects at least 3 months after exposure. Of the 28 infected travelers, 23 (82%) exhibited symptoms and 16 (70%) consulted their general practitioner before the information about the outbreak had spread, but none of these patients had a serology for schistosomiasis done during the first consultation.; The usual prevention message of avoiding freshwater contact when traveling in tropical regions had no impact on the behavior of these travelers, who still went swimming at the Lily waterfalls. This prevention message should, therefore, be either modified or abandoned. The clinical presentation of acute schistosomiasis is often misleading. General practitioners should at least request an eosinophil count, when confronted with a returning traveler with fever. If eosinophilia is detected, it should prompt the search for a parasitic disease.
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- 2015
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9. Impact of Matrix-Assisted Laser Desorption Ionization Time-of-Flight Mass Spectrometry on the Clinical Management of Patients With Gram-negative Bacteremia: A Prospective Observational Study
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Gilbert Greub, Christelle Vogne, Guy Prod'hom, Thierry Calandra, Olivier F. Clerc, and Alain Bizzini
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Male ,Microbiology (medical) ,medicine.medical_specialty ,Enterobacteriaceae/enzymology ,Bacteremia/diagnosis ,Gentian Violet/chemistry ,Bacteremia ,beta-Lactamases/genetics ,Mass spectrometry ,beta-Lactam Resistance ,beta-Lactamases ,law.invention ,Bacterial Proteins ,Enterobacteriaceae ,Bacteremia/drug therapy ,law ,Internal medicine ,Enterobacteriaceae Infections/microbiology ,medicine ,Humans ,Blood culture ,Prospective Studies ,Prospective cohort study ,beta-Lactam Resistance/genetics ,medicine.diagnostic_test ,Bacterial Proteins/genetics ,business.industry ,Enterobacteriaceae Infections ,Enterobacteriaceae Infections/diagnosis ,Middle Aged ,medicine.disease ,Anti-Bacterial Agents ,Bacteremia/microbiology ,Surgery ,Anti-Bacterial Agents/therapeutic use ,Matrix-assisted laser desorption/ionization ,Infectious Diseases ,Gram staining ,Phenazines/chemistry ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Phenazines ,Female ,Gentian Violet ,Observational study ,Time-of-flight mass spectrometry ,business ,Enterobacteriaceae Infections/drug therapy - Abstract
BACKGROUND: Early identification of pathogens from blood cultures using matrix-assisted laser desorption ionization time-of-flight (MALDI-TOF) mass spectrometry may optimize the choice of empirical antibiotic therapy in the setting of bloodstream infections. We aimed to assess the impact of this new technology on the use of antibiotic treatment in patients with gram-negative bacteremia. METHODS: We conducted a prospective observational study from January to December 2010 to evaluate the sequential and separate impacts of Gram stain reporting and MALDI-TOF bacterial identification performed on blood culture pellets in patients with gram-negative bacteremia. The primary outcome was the impact of MALDI-TOF on empirical antibiotic choice. RESULTS: Among 202 episodes of gram-negative bacteremia, Gram stain reporting had an impact in 42 cases (20.8%). MALDI-TOF identification led to a modification of empirical therapy in 71 of all 202 cases (35.1%), and in 16 of 27 cases (59.3%) of monomicrobial bacteremia caused by AmpC-producing Enterobacteriaceae. The most frequently observed impact was an early appropriate broadening of the antibiotic spectrum in 31 of 71 cases (43.7%). In total, 143 of 165 episodes (86.7%) of monomicrobial bacteremia were correctly identified at genus level by MALDI-TOF. CONCLUSIONS: In a low prevalence area for extended spectrum betalactamases (ESBL) and multiresistant gram-negative bacteria, MALDI-TOF performed on blood culture pellets had an impact on the clinical management of 35.1% of all gram-negative bacteremia cases, demonstrating a greater impact than Gram stain reporting. Thus, MALDI-TOF could become a vital second step beside Gram stain in guiding the empirical treatment of patients with bloodstream infection.
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- 2017
10. Rapid Detection of Staphylococcus aureus Strains with Reduced Susceptibility to Vancomycin by Isothermal Microcalorimetry
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Frédéric Laurent, Marlyse Giddey, José M. Entenza, Alain Bizzini, Olga Sakwinska, Oriol Manuel, and B. Bétrisey
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Male ,Microbiology (medical) ,Isothermal microcalorimetry ,Staphylococcus aureus ,Population ,Microbial Sensitivity Tests ,Calorimetry ,Biology ,medicine.disease_cause ,Vial ,Microbiology ,Predictive Value of Tests ,Vancomycin ,medicine ,Humans ,education ,Incubation ,Etest ,education.field_of_study ,Strain (chemistry) ,Bacteriology ,biochemical phenomena, metabolism, and nutrition ,Middle Aged ,Anti-Bacterial Agents ,medicine.drug - Abstract
Methicillin-resistant Staphylococcus aureus (MRSA) usually harbors a vancomycin-susceptible phenotype (VSSA) but can exhibit reduced vancomycin susceptibility phenotypes that can be heterogeneous-intermediate (hVISA), intermediate (VISA), or fully resistant (VRSA). Current detection techniques (e.g., Etest and population analysis profiles [PAPs]) are slow and time-consuming. We investigated the potential of microcalorimetry to detect reduced susceptibilities to vancomycin in MRSA strains. Representative MSSA, VSSA, hVISA, VISA, and VRSA reference strains, as well as clinical isolates, were used. PAPs were performed by standard methods. Microcalorimetry was performed by inoculating 5 × 10 7 CFU of overnight cultures into 3-ml vials of brain heart infusion broth supplemented with increasing concentrations of vancomycin, and growth-related heat production was measured at 37°C. For the reference strains, no heat production was detected in the VSSA isolates at vancomycin concentrations of >3 μg/ml during the 72 h of incubation. The hVISA and VISA strains showed heat production with concentration-proportional delays of up to 6 μg/ml in 48 h and up to 12 μg/ml in 72 h, respectively. The VRSA strain showed heat production at concentrations up to 16 μg/ml in 12 h. The testing of clinical strains indicated an excellent negative predictive value, allowing us to rule out a decreased vancomycin susceptibility phenotype in
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- 2014
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11. Analysis of the tolerance of pathogenic enterococci and Staphylococcus aureus to cell wall active antibiotics
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Rabia Ladjouzi, Axel Hartke, Abdellah Benachour, Alain Bizzini, Nicolas Sauvageot, Francois Lebreton, Alain Rincé, Unité de Recherche Risques Microbiens (U2RM), Université de Caen Normandie (UNICAEN), and Normandie Université (NU)-Normandie Université (NU)
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Microbiology (medical) ,Staphylococcus aureus ,medicine.drug_class ,[SDV]Life Sciences [q-bio] ,Enterococcus faecium ,Antibiotics ,Microbial Sensitivity Tests ,Penicillins ,medicine.disease_cause ,Enterococcus faecalis ,Microbiology ,Bactericidal antibiotics ,03 medical and health sciences ,Cell Wall ,Vancomycin ,medicine ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Pharmacology (medical) ,Pathogen ,030304 developmental biology ,Pharmacology ,0303 health sciences ,biology ,Superoxide Dismutase ,030306 microbiology ,Genetic Complementation Test ,Drug Tolerance ,Superoxide dismutases ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Anti-Bacterial Agents ,3. Good health ,Penicillin ,Infectious Diseases ,Enterococcus ,Oxidative stress ,Gene Deletion ,medicine.drug - Abstract
International audience; Objectives: Tolerance refers to the phenomenon that bacteria do not significantly die when exposed to bactericidal antibiotics. Enterococci are known for their high tolerance to these drugs, but the molecular reasons why they resist killing are not understood. In a previous study we showed that the superoxide dismutase (SOD) is implicated in this tolerance. This conclusion was based on the results obtained with one particular strain of Enterococcus faecalis and therefore the objective of the present communication was to analyse whether dependence of tolerance on active SOD is a general phenomenon for enterococci and another Gram-positive pathogen, Staphylococcus aureus.Methods: Mutants deficient in SOD activity were constructed in pathogenic enterococci. The wild-type sodA gene was cloned into an expression vector and transformed into SOD-deficient strains for complementation with varying levels of SOD activity. Previously constructed SOD-deficient strains of S. aureus were also included in this study. Tolerance to vancomycin and penicillin was then tested.Results: We demonstrated that the dependence on SOD of tolerance to vancomycin and penicillin is a common trait of antibiotic-susceptible pathogenic enterococci. By varying the levels of expression we could also show that tolerance to vancomycin is directly correlated to SOD activity. Interestingly, deletion of the sodA gene in a non-tolerant Enterococcus faecium strain did not further sensitize the mutant to bactericidal antibiotics. Finally, we showed that the SOD enzymes of S. aureus are also implicated in tolerance to vancomycin.Conclusion: High tolerance of enterococci to cell wall active antibiotics can be reversed by SOD deficiency.
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- 2013
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12. Biofilm formation by staphylococci on fresh, fresh-frozen and processed human and bovine bone grafts
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Alain Bizzini, Andrej Trampuz, Ulrika Furustrand Tafin, Thomas Ilchmann, and Martin Clauss
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Male ,Isothermal microcalorimetry ,Staphylococcus aureus ,lcsh:Diseases of the musculoskeletal system ,Sonication ,0206 medical engineering ,lcsh:Surgery ,chemistry.chemical_element ,02 engineering and technology ,Calcium ,medicine.disease_cause ,Tryptic soy broth ,Microbiology ,03 medical and health sciences ,chemistry.chemical_compound ,bone grafts ,Bone cell ,medicine ,Animals ,Humans ,Aged ,030304 developmental biology ,Cryopreservation ,0303 health sciences ,Bone Transplantation ,Biofilm ,Femur Head ,lcsh:RD1-811 ,020601 biomedical engineering ,Bacterial Load ,medicine.anatomical_structure ,chemistry ,Biofilms ,Cattle ,bacterial colonies ,Bone marrow ,lcsh:RC925-935 - Abstract
Biofilm formation is a multi-step process influenced by surface properties. We investigated early and mature biofilm of Staphylococcus aureus on 4 different biological calcium phosphate (CaP) bone grafts used for filling bone defects. We investigated standardised cylinders of fresh and fresh-frozen human bone grafts were harvested from femoral heads; processed humanand bovine bone grafts were obtained preformed. Biofilm formation was done in tryptic soy broth (TSB) using S. aureus (ATCC 29213) with static conditions. Biofilm density after 3 h (early biofilm) and 24 h (mature biofilm) was investigated by sonication and microcalorimetry. After 3 h, bacterial density was highest on fresh-frozenandfresh bone grafts. After 24 h, biofilm density was lowest on freshbone grafts (p < 0.001) compared to the other 3 materials, which did not differ quantitatively (p > 0.05). The lowest increase in bacterial density was detected on fresh bone grafts (p < 0.001). Despite normal shaped colonies, we found additional small colonies on the surface of the fresh and fresh-frozen samples by sonication. This was also apparent in microcalorimetric heat-flow curves. The four investigated CaP bone grafts showed minor structural differences in architecture but marked differences concerning serum coverage and the content of bone marrow, fibrous tissue and bone cells. These variations resulted in a decreased biofilm density on freshand fresh-frozenbone grafts after 24 h, despite an increased early biofilm formation and might also be responsible for the variations in colony morphology (small colonies). Detection of small colony variants by microcalorimetry might be a new approach to improve the understanding of biofilm formation.
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- 2013
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13. Bactericidal activity and mechanism of action of copper-sputtered flexible surfaces against multidrug-resistant pathogens
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Alain Bizzini, Cesar Pulgarin, Stefano Mancini, José M. Entenza, Sami Rtimi, Myriam K. S. Ballo, and J. Kiwi
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0301 basic medicine ,Gram-negative bacteria ,030106 microbiology ,Drug Evaluation, Preclinical ,Microbial Sensitivity Tests ,medicine.disease_cause ,Gram-Positive Bacteria ,Applied Microbiology and Biotechnology ,Enterococcus faecalis ,Microbiology ,03 medical and health sciences ,Staphylococcus epidermidis ,Drug Resistance, Bacterial ,Gram-Negative Bacteria ,medicine ,Humans ,Antimicrobial properties of copper ,biology ,General Medicine ,Bacterial Infections ,biochemical phenomena, metabolism, and nutrition ,biology.organism_classification ,Antimicrobial ,Acinetobacter baumannii ,Anti-Bacterial Agents ,Multiple drug resistance ,030104 developmental biology ,Staphylococcus aureus ,Nanoparticles ,Copper ,Biotechnology - Abstract
Using direct current magnetron sputtering (DCMS), we generated flexible copper polyester surfaces (Cu-PES) and investigated their antimicrobial activity against a range of multidrug-resistant (MDR) pathogens including eight Gram-positive isolates (three methicillin-resistant Staphylococcus aureus [MRSA], four vancomycin-resistant enterococci, one methicillin-resistant Staphylococcus epidermidis) and four Gram-negative strains (one extended-spectrum β-lactamase-producing [ESBL] Escherichia coli, one ESBL Klebsiella pneumoniae, one imipenem-resistant Pseudomonas aeruginosa, and one ciprofloxacin-resistant Acinetobacter baumannii). Bactericidal activity (≥3 log10 CFU reduction of the starting inoculum) was reached within 15-30 min exposure to Cu-PES. Antimicrobial activity of Cu-PES persisted in the absence of oxygen and against both Gram-positive and Gram-negative bacteria containing elevated levels of catalases, indicating that reactive oxygen species (ROS) do not play a primary role in the killing process. The decrease in cell viability of MRSA ATCC 43300 and Enterococcus faecalis V583 correlated with the progressive loss of cytoplasmic membrane integrity both under aerobic and anaerobic conditions, suggesting that Cu-PES mediated killing is primarily induced by disruption of the cytoplasmic membrane function. Overall, we here present novel antimicrobial copper surfaces with improved stability and sustainability and provide further insights into their mechanism of killing.
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- 2016
14. Force volume and stiffness tomography investigation on the dynamics of stiff material under bacterial membranes
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Laura Rio, Sandor Kasas, Charles Roduit, Giovanni Dietler, Andrej Trampuz, Alain Bizzini, and Giovanni Longo
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0303 health sciences ,Materials science ,Resolution (electron density) ,Dynamics (mechanics) ,Stiffness ,Nanotechnology ,02 engineering and technology ,021001 nanoscience & nanotechnology ,03 medical and health sciences ,Membrane ,Structural Biology ,Microscopy ,medicine ,Tomography ,medicine.symptom ,0210 nano-technology ,Molecular Biology ,Nanoscopic scale ,Image resolution ,030304 developmental biology - Abstract
The determination of the characteristics of micro-organisms in clinical specimens is essential for the rapid diagnosis and treatment of infections. A thorough investigation of the nanoscale properties of bacteria can prove to be a fundamental tool. Indeed, in the latest years, the importance of high resolution analysis of the properties of microbial cell surfaces has been increasingly recognized. Among the techniques available to observe at high resolution specific properties of microscopic samples, the Atomic Force Microscope (AFM) is the most widely used instrument capable to perform morphological and mechanical characterizations of living biological systems. Indeed, AFM can routinely study single cells in physiological conditions and can determine their mechanical properties with a nanometric resolution. Such analyses, coupled with high resolution investigation of their morphological properties, are increasingly used to characterize the state of single cells. In this work, we exploit the capabilities and peculiarities of AFM to analyze the mechanical properties of Escherichia coli in order to evidence with a high spatial resolution the mechanical properties of its structure. In particular, we will show that the bacterial membrane is not mechanically uniform, but contains stiffer areas. The force volume investigations presented in this work evidence for the first time the presence and dynamics of such structures. Such information is also coupled with a novel stiffness tomography technique, suggesting the presence of stiffer structures present underneath the membrane layer that could be associated with bacterial nucleoids. Copyright (C) 2012 John Wiley & Sons, Ltd.
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- 2012
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15. A Single Mutation in Enzyme I of the Sugar Phosphotransferase System Confers Penicillin Tolerance to Streptococcus gordonii
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J. M. Entenza, Alain Bizzini, Olivier Michielin, Philippe Moreillon, B. Erni, and I. Arnold
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DNA, Bacterial ,Models, Molecular ,Genetic Linkage ,Protein Conformation ,medicine.drug_class ,Penicillin Resistance ,Antibiotics ,Microbial Sensitivity Tests ,Penicillins ,Biology ,Microbiology ,Transformation, Genetic ,Mechanisms of Resistance ,In vivo ,medicine ,Point Mutation ,Pharmacology (medical) ,Cloning, Molecular ,Phosphoenolpyruvate Sugar Phosphotransferase System ,Antibacterial agent ,Pharmacology ,Endocarditis ,Streptococcus gordonii ,Chromosome Mapping ,PEP group translocation ,Streptococcaceae ,biology.organism_classification ,Anti-Bacterial Agents ,Penicillin ,Glucose ,Infectious Diseases ,Amino Acid Substitution ,Carbohydrate Metabolism ,Energy Metabolism ,Dimerization ,Gene Deletion ,Bacteria ,medicine.drug - Abstract
Tolerance is a poorly understood phenomenon that allows bacteria exposed to a bactericidal antibiotic to stop their growth and withstand drug-induced killing. This survival ability has been implicated in antibiotic treatment failures. Here, we describe a single nucleotide mutation ( tol1 ) in a tolerant Streptococcus gordonii strain (Tol1) that is sufficient to provide tolerance in vitro and in vivo. It induces a proline-to-arginine substitution (P483R) in the homodimerization interface of enzyme I of the sugar phosphotransferase system, resulting in diminished sugar uptake. In vitro, the susceptible wild-type (WT) and Tol1 cultures lost 4.5 and 0.6 log 10 CFU/ml, respectively, after 24 h of penicillin exposure. The introduction of tol1 into the WT (WT P483R) conferred tolerance (a loss of 0.7 log 10 CFU/ml/24 h), whereas restitution of the parent sequence in Tol1 (Tol1 R483P) restored antibiotic susceptibility. Moreover, penicillin treatment of rats in an experimental model of endocarditis showed a complete inversion in the outcome, with a failure of therapy in rats infected with WT P483R and the complete disappearance of bacteria in animals infected with Tol1 R483P.
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- 2010
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16. The Enterococcus faecalis superoxide dismutase is essential for its tolerance to vancomycin and penicillin
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Yanick Auffray, Alain Bizzini, Axel Hartke, Chen Zhao, Laboratoire de Microbiologie de l’Environnement (LME), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU)-Institut National de la Recherche Agronomique (INRA), Institut National de la Recherche Agronomique (INRA)-Université de Caen Normandie (UNICAEN), and Normandie Université (NU)-Normandie Université (NU)
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Microbiology (medical) ,Multidrug tolerance ,medicine.drug_class ,[SDV]Life Sciences [q-bio] ,Antibiotics ,Colony Count, Microbial ,Microbial Sensitivity Tests ,Penicillins ,Models, Biological ,Enterococcus faecalis ,Microbiology ,Superoxide dismutase ,03 medical and health sciences ,chemistry.chemical_compound ,Bacterial Proteins ,Superoxides ,Vancomycin ,Drug Resistance, Bacterial ,medicine ,Humans ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Pharmacology (medical) ,030304 developmental biology ,Antibacterial agent ,Pharmacology ,chemistry.chemical_classification ,0303 health sciences ,Reactive oxygen species ,Microbial Viability ,biology ,Superoxide Dismutase ,030306 microbiology ,Superoxide ,biology.organism_classification ,Anti-Bacterial Agents ,3. Good health ,Penicillin ,Infectious Diseases ,chemistry ,biology.protein ,Gene Deletion ,medicine.drug - Abstract
OBJECTIVES Enterococcus faecalis is a human commensal that has the ability to become a pathogen. Because of its ruggedness, it can persist in the hospital setting and cause serious nosocomial infections. E. faecalis can acquire multiple drug resistance determinants but is also intrinsically tolerant to a number of antibiotics, such as penicillin or vancomycin, meaning that these usually bactericidal drugs only exhibit a bacteriostatic effect. Recently, evidence has been presented that exposure to bactericidal antibiotics induced the production of reactive oxygen species in bacteria. Here, we studied the role of enzymes involved in the oxidative stress response in the survival of E. faecalis after antibiotic treatment. METHODS Mutants defective in genes encoding oxidative stress defence activities were tested by time-kill curves for their contribution to antibiotic tolerance in comparison with the E. faecalis JH2-2 wild-type (WT). RESULTS In killing assays, WT cultures lost 0.2 +/- 0.1 and 1.3 +/- 0.2 log(10) cfu/mL after 24 h of vancomycin or penicillin exposure, respectively. A deletion mutant of the superoxide dismutase gene (DeltasodA) exhibited a lack of tolerance as cultures lost 4.1 +/- 0.5 and 4.8 +/- 0.7 log(10) cfu/mL after 24 h of exposure to the same drugs. Complementation of DeltasodA re-established the tolerant phenotype. Bacterial killing was an oxygen-dependent process and a model is presented implicating the superoxide anion as the mediator of this killing. As predicted from the model, a mutant defective in peroxidase activities excreted hydrogen peroxide at an elevated rate. CONCLUSIONS SodA is central to the intrinsic ability of E. faecalis to withstand drug-induced killing, and the superoxide anion seems to be the key effector of bacterial death.
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- 2009
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17. Loss of penicillin tolerance by inactivating the carbon catabolite repression determinant CcpA in Streptococcus gordonii
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Philippe Moreillon, J. M. Entenza, and Alain Bizzini
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DNA, Bacterial ,Microbiology (medical) ,Multidrug tolerance ,Penicillin Resistance ,Molecular Sequence Data ,Catabolite repression ,Microbial Sensitivity Tests ,Penicillins ,Biology ,Microbiology ,chemistry.chemical_compound ,Bacterial Proteins ,Streptococcal Infections ,medicine ,Animals ,Pharmacology (medical) ,Rats, Wistar ,Arginine deiminase ,DNA Primers ,Anti-Bacterial Agents/therapeutic use ,Bacterial Proteins/genetics ,Base Sequence ,Blotting, Southern ,Carbon/metabolism ,DNA, Bacterial/genetics ,DNA-Binding Proteins/genetics ,Endocarditis, Bacterial/drug therapy ,Endocarditis, Bacterial/microbiology ,Female ,Genes, Bacterial/genetics ,Penicillin Resistance/genetics ,Penicillins/therapeutic use ,Phenotype ,Plasmids/genetics ,Rats ,Repressor Proteins/genetics ,Streptococcal Infections/drug therapy ,Streptococcal Infections/microbiology ,Streptococcus/genetics ,Streptococcus/growth & development ,Transformation, Bacterial ,Antibacterial agent ,Pharmacology ,Streptococcus gordonii ,Streptococcus ,Endocarditis, Bacterial ,Streptococcaceae ,biology.organism_classification ,Carbon ,Anti-Bacterial Agents ,DNA-Binding Proteins ,Repressor Proteins ,Penicillin ,Infectious Diseases ,chemistry ,Genes, Bacterial ,CCPA ,Plasmids ,medicine.drug - Abstract
OBJECTIVES: Antibiotic tolerance is a phenomenon allowing bacteria to withstand drug-induced killing. Here, we studied a penicillin-tolerant mutant of Streptococcus gordonii (Tol1), which was shown to be deregulated in the expression of the arginine deiminase operon (arc). arc was not directly responsible for tolerance, but is controlled by the global regulator CcpA. Therefore, we sought whether CcpA might be implicated in tolerance. METHODS: The ccpA gene was characterized and subsequently inactivated by PCR ligation mutagenesis in both the susceptible wild-type (WT) and Tol1. The minimal inhibitory concentration and time-kill curves for the strains were determined and the outcome of penicillin treatment in experimental endocarditis assessed. RESULTS: ccpA sequence and expression were similar between the WT and Tol1 strains. In killing assays, the WT lost 3.5 +/- 0.6 and 5.3 +/- 0.6 log(10) cfu/mL and Tol1 lost 0.4 +/- 0.2 and 1.4 +/- 0.9 log(10) cfu/mL after 24 and 48 h of penicillin exposure, respectively. Deletion of ccpA almost totally restored Tol1 kill susceptibility (loss of 2.5 +/- 0.7 and 4.9 +/- 0.7 log(10) cfu/mL at the same endpoints). In experimental endocarditis, penicillin treatment induced a significant reduction in vegetation bacterial densities between Tol1 (4.1 log(10) cfu/g) and Tol1DeltaccpA (2.4 log(10) cfu/g). Restitution of ccpA re-established the tolerant phenotype both in vitro and in vivo. CONCLUSIONS: CcpA, a global regulator of the carbon catabolite repression system, is implicated in penicillin tolerance both in vitro and in vivo. This links antibiotic survival to bacterial sugar metabolism. However, since ccpA sequence and expression were similar between the WT and Tol1 strains, other factors are probably involved in tolerance.
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- 2007
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18. [Acute schistosomiasis: lessons learned from a cohort of 42 exposed travelers]
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Rochat L, Alain Bizzini, Py, Bochud, Senn N, De Vallière S, and Genton B
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Adult ,Male ,Travel ,Adolescent ,Fever ,Acute Disease ,Madagascar ,Humans ,Schistosomiasis ,Female ,Middle Aged ,Aged - Abstract
Acute schistosomiasis is a regularly encountered disease in travelers. Because of the temporal delay, its unspecific presentation and the spontaneous resolution, acute schistosomiasis can easily remain unrecognized by physicians who are not familiar with tropical pathologies. In December 2011, a female traveler was admitted to the hospital with undetermined fever after having returned from Madagascar where she bathed in fresh water. Acute schistosomiasis was diagnosed and infection was suspected among other travelers of her group. Seroconversion was confirmed among 78% of participants. This article intends to clarify the preventive and diagnostic strategies based on the lessons learned from this cluster of 42 travelers exposed to schistosomiasis.
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- 2015
19. Evaluation of a new serological test for the detection of anti-Coxiella and anti-Rickettsia antibodies
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Pascal Meylan, David Baud, O Péter, Alain Bizzini, Gilbert Greub, and Sophie Edouard
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Immunology ,Q fever ,Boutonneuse Fever ,Microbiology ,Mice ,Rickettsia typhi ,medicine ,Animals ,Humans ,Serologic Tests ,Immunoassay ,biology ,Typhus, Endemic Flea-Borne ,Coxiella burnetii ,biology.organism_classification ,medicine.disease ,Virology ,Antibodies, Bacterial ,Spotted fever ,Boutonneuse fever ,Rickettsia conorii ,Infectious Diseases ,Rickettsia ,Rickettsiosis ,Immunoglobulin M ,Immunoglobulin G ,Q Fever - Abstract
Coxiella burnetii and members of the genus Rickettsia are obligate intracellular bacteria. Since cultivation of these organisms requires dedicated techniques, their diagnosis usually relies on serological or molecular biology methods. Immunofluorescence is considered the gold standard to detect antibody-reactivity towards these organisms. Here, we assessed the performance of a new automated epifluorescence immunoassay (InoDiag) to detect IgM and IgG against C. burnetii, Rickettsia typhi and Rickettsia conorii. Samples were tested with the InoDiag assay. A total of 213 sera were tested, of which 63 samples from Q fever, 20 from spotted fever rickettsiosis, 6 from murine typhus and 124 controls. InoDiag results were compared to micro-immunofluorescence. For acute Q fever, the sensitivity of phase 2 IgG was only of 30% with a cutoff of 1 arbitrary unit (AU). In patients with acute Q fever with positive IF IgM, sensitivity reached 83% with the same cutoff. Sensitivity for chronic Q fever was 100% whereas sensitivity for past Q fever was 65%. Sensitivity for spotted Mediterranean fever and murine typhus were 91% and 100%, respectively. Both assays exhibited a good specificity in control groups, ranging from 79% in sera from patients with unrelated diseases or EBV positivity to 100% in sera from healthy patients. In conclusion, the InoDiag assay exhibits an excellent performance for the diagnosis of chronic Q fever but a very low IgG sensitivity for acute Q fever likely due to low reactivity of phase 2 antigens present on the glass slide. This defect is partially compensated by the detection of IgM. Because it exhibits a good negative predictive value, the InoDiag assay is valuable to rule out a chronic Q fever. For the diagnosis of rickettsial diseases, the sensitivity of the InoDiag method is similar to conventional immunofluorescence.
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- 2015
20. Antibiotic-Dependent Correlation Between Drug-Induced Killing and Loss of Luminescence inStreptococcus gordoniiExpressing Luciferase
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B. Loeliger, P. Stutzmann Meier, Paul Majcherczyk, Isabelle Caldelari, P. Moreillon, and Alain Bizzini
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Microbiology (medical) ,Transcription, Genetic ,Penicillin Resistance ,Blotting, Western ,Immunology ,Mutant ,Colony Count, Microbial ,Microbial Sensitivity Tests ,Penicillins ,Microbiology ,Gene Expression Regulation, Enzymologic ,Anti-Infective Agents ,Ciprofloxacin ,Genes, Reporter ,medicine ,Luciferase ,Luciferases ,Pharmacology ,chemistry.chemical_classification ,Reporter gene ,biology ,Chloramphenicol ,Streptococcus gordonii ,Streptococcus ,Promoter ,biology.organism_classification ,Molecular biology ,Anti-Bacterial Agents ,Penicillin ,Enzyme ,chemistry ,Genes, Bacterial ,Luminescent Measurements ,medicine.drug - Abstract
Measuring antibiotic-induced killing relies on time-consuming biological tests. The firefly luciferase gene (luc) was successfully used as a reporter gene to assess antibiotic efficacy rapidly in slow-growing Mycobacterium tuberculosis. We tested whether luc expression could also provide a rapid evaluation of bactericidal drugs in Streptococcus gordonii. The suicide vectors pFW5luc and a modified version of pJDC9 carrying a promoterless luc gene were used to construct transcriptional-fusion mutants. One mutant susceptible to penicillin-induced killing (LMI2) and three penicillin-tolerant derivatives (LMI103, LMI104, and LMI105) producing luciferase under independent streptococcal promoters were tested. The correlation between antibiotic-induced killing and luminescence was determined with mechanistically unrelated drugs. Chloramphenicol (20 times the MIC) inhibited bacterial growth. In parallel, luciferase stopped increasing and remained stable, as determined by luminescence and Western blots. Ciprofloxacin (200 times the MIC) rapidly killed 1.5 log10 CFU/ml in 2-4 hr. Luminescence decreased simultaneously by 10-fold. In contrast, penicillin (200 times the MIC) gave discordant results. Although killing was slow (< or = 0.5 log10 CFU/ml in 2 hr), luminescence dropped abruptly by 50-100-times in the same time. Inactivating penicillin with penicillinase restored luminescence, irrespective of viable counts. This was not due to altered luciferase expression or stability, suggesting some kind of post-translational modification. Luciferase shares homology with aminoacyl-tRNA synthetase and acyl-CoA ligase, which might be regulated by macromolecule synthesis and hence affected in penicillin-inhibited cells. Because of resemblance, luciferase might be down-regulated simultaneously. Luminescence cannot be universally used to predict antibiotic-induced killing. Thus, introducing reporter enzymes sharing mechanistic similarities with normal metabolic reactions might reveal other effects than those expected.
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- 2003
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21. Mutations in msrA and msrB, encoding epimer-specific methionine sulfoxide reductases, affect expression of glycerol-catabolic operons in Enterococcus faecalis differently
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Nicolas Sauvageot, Xiaolin Zhang, Chen Zhao, Alain Bizzini, Axel Hartke, Unité de Recherche Risques Microbiens (U2RM), Université de Caen Normandie (UNICAEN), Normandie Université (NU)-Normandie Université (NU), Centre Hospitalier Universitaire Vaudois [Lausanne] (CHUV), and Academy of State Administration of Grain [Beijing] (ASAG)
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Glycerol ,Operon ,[SDV]Life Sciences [q-bio] ,Mutant ,Biology ,Microbiology ,Enterococcus faecalis ,03 medical and health sciences ,chemistry.chemical_compound ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,030304 developmental biology ,chemistry.chemical_classification ,0303 health sciences ,030306 microbiology ,Catabolism ,Gene Expression Regulation, Bacterial ,biology.organism_classification ,Aerobiosis ,Oxidative Stress ,Enzyme ,chemistry ,Biochemistry ,Methionine Sulfoxide Reductases ,Mutation ,Methionine sulfoxide reductase ,Metabolic Networks and Pathways ,MSRA - Abstract
International audience; This study aims to define the cellular roles of methionine sulfoxide reductases A and B, evolutionarily highly conserved enzymes able to repair oxidized methionines in proteins. msrA and msrB mutants were exposed to an internal oxidative stress by growing them under aerobic conditions on glycerol. Interestingly, the msr mutants behave completely differently under these conditions. The msrA mutant is inhibited, whereas the msrB mutant is stimulated in its growth in comparison with the parent strain. Glycerol can be catabolized by either the GlpK or DhaK pathways in Enterococcus faecalis. Our results strongly suggest that in the msrA mutant, glycerol is catabolized via the GlpK pathway leading to increased synthesis of H2O2, which accumulates to concentrations inhibitory to growth in comparison with the parent strain. In contrast in the msrB mutant, glycerol is metabolized via the DhaK pathway which is not accompanied by the synthesis of H2O2. The molecular basis for the differences in glycerol flux seems to be due to expression differences of the two glycerol-catabolic operons in the msr mutants.
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- 2012
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22. Comparison of Methods for Evaluation of the Bactericidal Activity of Copper-Sputtered Surfaces against Methicillin-Resistant Staphylococcus aureus
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Andrej Trampuz, Laura Rio, Bertrand Betrisey, Ewelina Kusiak-Nejman, Alain Bizzini, Cesar Pulgarin, and John Kiwi
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Isothermal microcalorimetry ,Methicillin-Resistant Staphylococcus aureus ,Materials science ,Surface Properties ,chemistry.chemical_element ,medicine.disease_cause ,Applied Microbiology and Biotechnology ,Microbiology ,Microscopy, Electron, Transmission ,medicine ,Environmental Microbiology ,Bacteriological Techniques ,Microbial Viability ,Ecology ,Sputter deposition ,Antimicrobial ,Microstructure ,Copper ,Methicillin-resistant Staphylococcus aureus ,Anti-Bacterial Agents ,Polyester ,chemistry ,Staphylococcus aureus ,Food Science ,Nuclear chemistry ,Biotechnology - Abstract
Bacteria can survive on hospital textiles and surfaces, from which they can be disseminated, representing a source of health care-associated infections (HCAIs). Surfaces containing copper (Cu), which is known for its bactericidal properties, could be an efficient way to lower the burden of potential pathogens. The antimicrobial activity of Cu-sputtered polyester surfaces, obtained by direct-current magnetron sputtering (DCMS), against methicillin-resistant Staphylococcus aureus (MRSA) was tested. The Cu-polyester microstructure was characterized by high-resolution transmission electron microscopy to determine the microstructure of the Cu nanoparticles and by profilometry to assess the thickness of the layers. Sputtering at 300 mA for 160 s led to a Cu film thickness of 20 nm (100 Cu layers) containing 0.209% (wt/wt) polyester. The viability of MRSA strain ATCC 43300 on Cu-sputtered polyester was evaluated by four methods: (i) mechanical detachment, (ii) microcalorimetry, (iii) direct transfer onto plates, and (iv) stereomicroscopy. The low efficacy of mechanical detachment impeded bacterial viability estimations. Microcalorimetry provided only semiquantitative results. Direct transfer onto plates and stereomicroscopy seemed to be the most suitable methods to evaluate the bacterial inactivation potential of Cu-sputtered polyester surfaces, since they presented the least experimental bias. Cu-polyester samples sputtered for 160 s by DCMS were further tested against 10 clinical MRSA isolates and showed a high level of bactericidal activity, with a 4-log 10 reduction in the initial MRSA load (10 6 CFU) within 1 h. Cu-sputtered polyester surfaces might be of use to prevent the transmission of HCAI pathogens.
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- 2012
23. Rapid detection of bacterial resistance to antibiotics using AFM cantilevers as nanomechanical sensors
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Giovanni Longo, Sandor Kasas, J. Notz, Giovanni Dietler, Livan Alonso-Sarduy, Alain Bizzini, Andrej Trampuz, and L. Marques Rio
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Staphylococcus aureus ,Cantilever ,medicine.drug_class ,Antibiotics ,Biomedical Engineering ,Microbial metabolism ,Bioengineering ,Nanotechnology ,Biosensing Techniques ,medicine.disease_cause ,Microscopy, Atomic Force ,Microbiology ,Antibiotic resistance ,medicine ,Escherichia coli ,Humans ,General Materials Science ,Electrical and Electronic Engineering ,Escherichia coli Infections ,Microbial Viability ,biology ,Chemistry ,Drug Resistance, Microbial ,Equipment Design ,Staphylococcal Infections ,Condensed Matter Physics ,biology.organism_classification ,Atomic and Molecular Physics, and Optics ,Anti-Bacterial Agents ,Ampicillin ,Biosensor ,Bacteria - Abstract
The widespread misuse of drugs has increased the number of multiresistant bacteria1, and this means that tools that can rapidly detect and characterize bacterial response to antibiotics are much needed in the management of infections. Various techniques, such as the resazurin-reduction assays2, the mycobacterial growth indicator tube3 or polymerase chain reaction-based methods4, have been used to investigate bacterial metabolism and its response to drugs. However, many are relatively expensive or unable to distinguish between living and dead bacteria. Here we show that the fluctuations of highly sensitive atomic force microscope cantilevers can be used to detect low concentrations of bacteria, characterize their metabolism and quantitatively screen (within minutes) their response to antibiotics. We applied this methodology to Escherichia coli and Staphylococcus aureus, showing that live bacteria produced larger cantilever fluctuations than bacteria exposed to antibiotics. Our preliminary experiments suggest that the fluctuation is associated with bacterial metabolism. Highly sensitive cantilever sensors can now be used to quantitatively characterize a bacterial response to drugs before they even replicate.
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- 2012
24. Vancomycin-intermediate Staphylococcus aureus selected during vancomycin therapy of experimental endocarditis are not detected by culture-based diagnostic procedures and persist after treatment arrest
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Marlyse Giddey, Alain Bizzini, Philippe Moreillon, Jacques Vouillamoz, and José M. Entenza
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Microbiology (medical) ,Staphylococcus aureus ,Vancomycin intermediate Staphylococcus aureus ,Biology ,Staphylococcal infections ,medicine.disease_cause ,Sensitivity and Specificity ,Microbiology ,In vivo ,Vancomycin ,medicine ,Endocarditis ,Animals ,Pharmacology (medical) ,Selection, Genetic ,Pharmacology ,Bacteriological Techniques ,Vancomycin Resistance ,Anti-Bacterial Agents/administration & dosage ,Bacteriological Techniques/methods ,Disease Models, Animal ,Endocarditis, Bacterial/drug therapy ,Endocarditis, Bacterial/microbiology ,Injections, Intravenous ,Rats ,Staphylococcal Infections/drug therapy ,Staphylococcal Infections/microbiology ,Staphylococcus aureus/drug effects ,Staphylococcus aureus/isolation & purification ,Vancomycin/administration & dosage ,Endocarditis, Bacterial ,Staphylococcal Infections ,medicine.disease ,Anti-Bacterial Agents ,Infectious Diseases ,Subculture (biology) ,After treatment ,medicine.drug - Abstract
OBJECTIVES: Laboratory detection of vancomycin-intermediate Staphylococcus aureus (VISA) and their heterogeneous VISA (hVISA) precursors is difficult. Thus, it is possible that vancomycin failures against supposedly vancomycin-susceptible S. aureus are due to undiagnosed VISA or hVISA. We tested this hypothesis in experimental endocarditis.¦METHODS: Rats with aortic valve infection due to the vancomycin-susceptible (MIC 2 mg/L), methicillin-resistant S. aureus M1V2 were treated for 2 days with doses of vancomycin that mimicked the pharmacokinetics seen in humans following intravenous administration of 1 g of the drug every 12 h. Half of the treated animals were killed 8 h after treatment arrest and half 3 days thereafter. Population analyses were done directly on vegetation homogenates or after one subculture in drug-free medium to mimic standard diagnostic procedures.¦RESULTS: Vancomycin cured 14 of 26 animals (54%; P
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- 2011
25. Matrix-assisted laser desorption ionization-time of flight mass spectrometry as an alternative to 16S rRNA gene sequencing for identification of difficult-to-identify bacterial strains
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Jacques Bille, Katia Jaton, D. Romo, Alain Bizzini, Guy Prod'hom, and Gilbert Greub
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Microbiology (medical) ,DNA, Bacterial ,Bacteriological Techniques ,Bacteria ,Matrix assisted laser desorption ionization time of flight ,Bacteriology ,Computational biology ,Bacterial Infections ,Sequence Analysis, DNA ,Biology ,Mass spectrometry ,Molecular biology ,DNA, Ribosomal ,Desorption ,RNA, Ribosomal, 16S ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,16s rrna gene sequencing ,Humans ,Identification (biology) - Abstract
Conventional methods are sometimes insufficient to identify human bacterial pathogens, and alternative techniques, often molecular, are required. Matrix-assisted laser desorption ionization–time of flight mass spectrometry (MALDI-TOF MS) identified with a valid score 45.9% of 410 clinical isolates from 207 different difficult-to-identify species having required 16S rRNA gene sequencing. MALDI-TOF MS might represent an alternative to 16S rRNA gene sequencing.
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- 2010
26. Matrix-assisted laser desorption ionization time-of-flight mass spectrometry, a revolution in clinical microbial identification
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Gilbert Greub and Alain Bizzini
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Microbiology (medical) ,Desorption ionization ,Cost-Benefit Analysis ,review ,Matrix assisted laser desorption ionization time of flight ,Mass spectrometry ,Fungal Proteins ,Species level ,Bacterial Proteins ,Blood-Borne Pathogens ,Humans ,Bacterial identification ,routine samples ,Fungal protein ,Chromatography ,Bacteria ,matrix-assisted laser desorption ionization time-of-flight mass spectrometry ,Chemistry ,Clinical Laboratory Techniques ,Fungi ,A protein ,General Medicine ,clinical microbiology laboratory ,Bacterial Typing Techniques ,Clinical microbiology ,Infectious Diseases ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Identification (biology) - Abstract
Until recently, matrix-assisted laser desorption ionization time-of-flight mass spectrometry (MALDI-TOF MS) techniques for the identification of microorganisms remained confined to research laboratories. In the last 2 years, the availability of relatively simple to use MALDI-TOF MS devices, which can be utilized in clinical microbiology laboratories, has changed the laboratory workflows for the identification of pathogens. Recently, the first prospective studies regarding the performance in routine bacterial identification showed that MALDI-TOF MS is a fast, reliable and cost-effective technique that has the potential to replace and/or complement conventional phenotypic identification for most bacterial strains isolated in clinical microbiology laboratories. For routine bacterial isolates, correct identification by MALDI-TOF MS at the species level was obtained in 84.1–93.6% of instances. In one of these studies, a protein extraction step clearly improved the overall valid identification yield, from 70.3% to 93.2%. This review focuses on the current state of use of MALDI-TOF MS for the identification of routine bacterial isolates and on the main difficulties that may lead to erroneous or doubtful identifications.
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- 2010
27. [New methods for the diagnosis of implant-associated infections]
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Trampuz A, Steinrücken J, Clauss M, Alain Bizzini, Furustrand U, Uçkay I, Peter R, Bille J, and Borens O
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Microscopy, Electron ,Prosthesis-Related Infections ,Humans ,Ultrasonics ,Arthroplasty, Replacement ,Calorimetry ,Polymerase Chain Reaction ,Mass Spectrometry - Abstract
For successful treatment of prosthetic joint infection, the identification of the infecting microorganism is crucial. Cultures of synovial fluid and intraoperative periprosthetic tissue represent the standard method for diagnosing prosthetic joint infection. Rapid and accurate diagnostic tools which can detect a broad range of causing microorganisms and their antimicrobial resistance are increasingly needed. With newer diagnostic techniques, such as sonication of removed implants, microcalorimetry, molecular methods and mass spectrometry, the sensitivity has been significantly increased. In this article, we describe the conventional and newer diagnostic techniques with their advantages and potential future applications.
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- 2010
28. Performance of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of bacterial strains routinely isolated in a clinical microbiology laboratory
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Gilbert Greub, Christian Durussel, Jacques Bille, Alain Bizzini, and Guy Prod'hom
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Microbiology (medical) ,Laboratory methods ,Bacteriological Techniques ,Chromatography ,Diagnostic microbiology ,Time Factors ,Bacteria ,Chemistry ,Matrix assisted laser desorption ionization time of flight ,Bacterial Infections ,Mass spectrometry ,Sensitivity and Specificity ,Clinical microbiology ,Species level ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Humans ,Identification (biology) ,Letters to the Editor - Abstract
Matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS) has recently been introduced in diagnostic microbiology laboratories for the identification of bacterial and yeast strains isolated from clinical samples. In the present study, we prospectively compared MALDI-TOF MS to the conventional phenotypic method for the identification of routine isolates. Colonies were analyzed by MALDI-TOF MS either by direct deposition on the target plate or after a formic acid-acetonitrile extraction step if no valid result was initially obtained. Among 1,371 isolates identified by conventional methods, 1,278 (93.2%) were putatively identified to the species level by MALDI-TOF MS and 73 (5.3%) were identified to the genus level, but no reliable identification was obtained for 20 (1.5%). Among the 1,278 isolates identified to the species level by MALDI-TOF MS, 63 (4.9%) discordant results were initially identified. Most discordant results (42/63) were due to systematic database-related taxonomical differences, 14 were explained by poor discrimination of the MALDI-TOF MS spectra obtained, and 7 were due to errors in the initial conventional identification. An extraction step was required to obtain a valid MALDI-TOF MS identification for 25.6% of the 1,278 valid isolates. In conclusion, our results show that MALDI-TOF MS is a fast and reliable technique which has the potential to replace conventional phenotypic identification for most bacterial strains routinely isolated in clinical microbiology laboratories.
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- 2010
29. Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Direct Bacterial Identification from Positive Blood Culture Pellets ▿
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Alain Bizzini, Christian Durussel, Gilbert Greub, Guy Prod'hom, and Jacques Bille
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Microbiology (medical) ,Bacteriological Techniques ,Chromatography ,Time Factors ,Bacteria ,Chemistry ,Pellets ,Matrix assisted laser desorption ionization time of flight ,Bacteriology ,Bacteremia ,Mass spectrometry ,Laser ,Sensitivity and Specificity ,law.invention ,Matrix-assisted laser desorption/ionization ,chemistry.chemical_compound ,Time of flight ,Blood ,law ,Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization ,Pellet ,Humans ,Ammonium chloride - Abstract
An ammonium chloride erythrocyte-lysing procedure was used to prepare a bacterial pellet from positive blood cultures for direct matrix-assisted laser desorption-ionization time of flight (MALDI-TOF) mass spectrometry analysis. Identification was obtained for 78.7% of the pellets tested. Moreover, 99% of the MALDI-TOF identifications were congruent at the species level when considering valid scores. This fast and accurate method is promising.
- Published
- 2010
30. Glycerol Is Metabolized in a Complex and Strain-Dependent Manner in Enterococcus faecalis
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Chen Zhao, Axel Hartke, Jean-Christophe Giard, Yanick Auffray, Nicolas Sauvageot, Alain Bizzini, Aurélie Budin-Verneuil, Laboratoire de Microbiologie de l’Environnement (LME), Institut National de la Recherche Agronomique (INRA)-Université de Caen Normandie (UNICAEN), and Normandie Université (NU)-Normandie Université (NU)
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Glycerol ,Glycerol kinase ,Physiology and Metabolism ,[SDV]Life Sciences [q-bio] ,Mutant ,Glycerolphosphate Dehydrogenase ,Microbiology ,Enterococcus faecalis ,03 medical and health sciences ,chemistry.chemical_compound ,Glycolysis ,[SDV.BBM]Life Sciences [q-bio]/Biochemistry, Molecular Biology ,Anaerobiosis ,Molecular Biology ,Sequence Deletion ,030304 developmental biology ,Dihydroxyacetone phosphate ,0303 health sciences ,Oxidase test ,biology ,Reverse Transcriptase Polymerase Chain Reaction ,030306 microbiology ,Hydrogen Peroxide ,biology.organism_classification ,Aerobiosis ,Biochemistry ,chemistry ,Glycerol dehydrogenase ,Signal Transduction ,Sugar Alcohol Dehydrogenases - Abstract
Enterococcus faecalis is equipped with two pathways of glycerol dissimilation. Glycerol can either first be phosphorylated by glycerol kinase and then oxidized by glycerol-3-phosphate oxidase (the glpK pathway) or first be oxidized by glycerol dehydrogenase and then phosphorylated by dihydroxyacetone kinase (the dhaK pathway). Both pathways lead to the formation of dihydroxyacetone phosphate, an intermediate of glycolysis. It was assumed that the glpK pathway operates during aerobiosis and that the dhaK pathway operates under anaerobic conditions. Because this had not been analyzed by a genetic study, we constructed mutants of strain JH2-2 affected in both pathways. The growth of these mutants on glycerol under aerobic and anaerobic conditions was monitored. In contrast to the former model, results strongly suggest that glycerol is catabolized simultaneously by both pathways in the E. faecalis JH2-2 strain in the presence of oxygen. In accordance with the former model, glycerol is metabolized by the dhaK pathway under anaerobic conditions. Comparison of different E. faecalis isolates revealed an impressive diversity of growth behaviors on glycerol. Analysis by BLAST searching and real-time reverse transcriptase PCR revealed that this diversity is based not on different gene contents but rather on differences in gene expression. Some strains used preferentially the glpK pathway whereas others probably exclusively the dhaK pathway under aerobic conditions. Our results demonstrate that the species E. faecalis cannot be represented by only one model of aerobic glycerol catabolism.
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- 2010
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31. Effects of alpha-phosphoglucomutase deficiency on cell wall properties and fitness in Streptococcus gordonii
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Muriel Gaillard, Siham. Beggah-Möller, Paul Majcherczyk, Philippe Moreillon, Blazenka Soldo, José M. Entenza, Alain Bizzini, and Vladimir Lazarevic
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Mutant ,Molecular Sequence Data ,Virulence ,Microbiology ,Cell wall ,chemistry.chemical_compound ,In vivo ,Cell Wall ,Streptococcal Infections ,Teichoic acid ,biology ,Base Sequence ,fungi ,Streptococcus gordonii ,Streptococcus ,Endocarditis, Bacterial ,Gene Expression Regulation, Bacterial ,Sequence Analysis, DNA ,biology.organism_classification ,Streptococcaceae ,Biochemistry ,chemistry ,Phosphoglucomutase ,Gene Deletion - Abstract
Streptococcus gordonii alpha-phosphoglucomutase, which converts glucose 6-phosphate to glucose 1-phosphate, is encoded by pgm. The pgm transcript is monocistronic and is initiated from a sigma(A)-like promoter. Mutants with a gene disruption in pgm exhibited an altered cell wall muropeptide pattern and a lower teichoic acid content, and had reduced fitness both in vitro and in vivo. In vitro, the reduced fitness included reduced growth, reduced viability in the stationary phase and increased autolytic activity. In vivo, the pgm-deficient strain had a lower virulence in a rat model of experimental endocarditis.
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- 2007
32. Lack of in vitro biofilm formation does not attenuate the virulence of Streptococcus gordonii in experimental endocarditis
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Siham. Beggah-Möller, Alain Bizzini, José M. Entenza, and Philippe Moreillon
- Subjects
Microbiology (medical) ,Immunology ,Virulence ,Biology ,medicine.disease_cause ,Microbiology ,Bacterial Adhesion ,In vivo ,Streptococcal Infections ,medicine ,Immunology and Allergy ,Endocarditis ,Animals ,Streptococcus ,Streptococcus gordonii ,Biofilm ,General Medicine ,Endocarditis, Bacterial ,biochemical phenomena, metabolism, and nutrition ,medicine.disease ,biology.organism_classification ,Streptococcaceae ,In vitro ,Rats ,Disease Models, Animal ,Infectious Diseases ,Biofilms ,Female - Abstract
The ability to induce experimental endocarditis of biofilm-deficient mutants of Streptococcus gordonii was studied in an isogenic background. Strains were inactivated in either comD, fruK or pbp2b genes, which are involved in biofilm formation. These strains were clearly impaired (>75% reduction) in biofilm production in vitro. However, this did not result in a decreased severity of infection in vivo.
- Published
- 2006
33. Infective Endocarditis in the Elderly
- Author
-
Yok-Ai Que, Alain Bizzini, and Philippe Moreillon
- Subjects
biology ,business.industry ,medicine.disease ,biology.organism_classification ,Streptococcus bovis ,medicine.disease_cause ,HACEK endocarditis ,Microbiology ,Enterococcus ,Staphylococcus aureus ,Infective endocarditis ,medicine ,Endocarditis ,Streptococcus gallolyticus ,business - Published
- 2006
- Full Text
- View/download PDF
34. Pasteurella multocida Zoonotic Ascending Infection: An Unusual Cause of Tubo-Ovarian Abscess
- Author
-
Alain Bizzini, Chahin Achtari, Guy Prod'hom, David Baud, Gilbert Greub, and Katia Jaton
- Subjects
endocrine system diseases ,animal diseases ,Pasteurella Infections ,Zoonoses ,Abscess/microbiology ,Pasteurella Infections/drug therapy ,Medicine ,Ovarian Diseases ,Abscess ,Pasteurella multocida ,Pasteurella multocida/isolation & purification ,biology ,Zoonotic Infection ,Abscess/surgery ,Pasteurella Infections/pathology ,Fallopian Tube Diseases ,respiratory system ,Ovarian Diseases/drug therapy ,Anti-Bacterial Agents ,Abscess/drug therapy ,Infectious Diseases ,Vaginal swabs ,Fallopian Tube Diseases/pathology ,Female ,Ovarian Diseases/surgery ,Pasteurella Infections/surgery ,Adult ,Fallopian Tube Diseases/microbiology ,Microbiology ,Fallopian Tube Diseases/drug therapy ,Ovarian Diseases/pathology ,Virology ,otorhinolaryngologic diseases ,Animals ,Humans ,Pasteurella ,Pasteurella Infections/microbiology ,business.industry ,Ovarian Diseases/microbiology ,bacterial infections and mycoses ,medicine.disease ,biology.organism_classification ,tubo-ovarian abscess ,Anti-Bacterial Agents/therapeutic use ,Fallopian Tube Diseases/surgery ,business - Abstract
We report a tubo-ovarian abscess due to Pasteurella multocida. This zoonotic infection was likely of ascending origin, as Pasteurella was also isolated from vaginal swabs.
- Published
- 2012
- Full Text
- View/download PDF
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