163 results on '"Alacid, Elisabet"'
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2. Parasitoid chytridiomycete Ericiomyces syringoforeus gen. et sp. nov. has unique cellular structures to infect the host
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Karpov, Sergey A., Reñé, Albert, Vishnyakov, Andrey E., Seto, Kensuke, Alacid, Elisabet, Paloheimo, Aurora, Kagami, Maiko, Kremp, Anke, and Garcés, Esther
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- 2021
- Full Text
- View/download PDF
3. Identification of a non-canonical ciliate nuclear genetic code where UAA and UAG code for different amino acids
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McGowan, Jamie, primary, Kilias, Estelle S., additional, Alacid, Elisabet, additional, Lipscombe, James, additional, Jenkins, Benjamin H., additional, Gharbi, Karim, additional, Kaithakottil, Gemy G., additional, Macaulay, Iain C., additional, McTaggart, Seanna, additional, Warring, Sally D., additional, Richards, Thomas A., additional, Hall, Neil, additional, and Swarbreck, David, additional
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- 2023
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4. Author Reply to Peer Reviews of Identification of a Non-Canonical Ciliate Nuclear Genetic Code Where UAA and UAG Code for Different Amino Acids
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McGowan, Jamie, primary, Kilias, Estelle S., additional, Alacid, Elisabet, additional, Lipscombe, James, additional, Jenkins, Benjamin H., additional, Gharbi, Karim, additional, Kaithakottil, Gemy G., additional, Macaulay, Iain, additional, McTaggart, Seanna, additional, Warring, Sally D., additional, Richards, Thomas, additional, Hall, Neil, additional, and Swarbreck, David, additional
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- 2023
- Full Text
- View/download PDF
5. Identification of a Non-Canonical Ciliate Nuclear Genetic Code Where UAA and UAG Code for Different Amino Acids
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McGowan, Jamie, primary, Kilias, Estelle S., additional, Alacid, Elisabet, additional, Lipscombe, James, additional, Jenkins, Benjamin H., additional, Gharbi, Karim, additional, Kaithakottil, Gemy G., additional, Macaulay, Iain C., additional, McTaggart, Seanna, additional, Warring, Sally D., additional, Richards, Thomas A., additional, Hall, Neil, additional, and Swarbreck, David, additional
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- 2022
- Full Text
- View/download PDF
6. The new chytridiomycete Paradinomyces triforaminorum gen. et sp. nov. co-occurs with other parasitoids during a Kryptoperidinium foliaceum (Dinophyceae) bloom in the Baltic Sea
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Reñé, Albert, primary, Alacid, Elisabet, additional, Vishnyakov, Andrey E., additional, Seto, Kensuke, additional, Tcvetkova, Victoria S., additional, Gordi, Jordina, additional, Kagami, Maiko, additional, Kremp, Anke, additional, Garcés, Esther, additional, and Karpov, Sergey A., additional
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- 2022
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- View/download PDF
7. A diversified and segregated mRNA spliced-leader system in the parasitic Perkinsozoa
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Alacid, Elisabet, primary, Irwin, Nicholas A. T., additional, Smilansky, Vanessa, additional, Milner, David S., additional, Kilias, Estelle S., additional, Leonard, Guy, additional, and Richards, Thomas A., additional
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- 2022
- Full Text
- View/download PDF
8. Integrating chytrid fungal parasites into plankton ecology: research gaps and needs
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Frenken, Thijs, Alacid, Elisabet, Berger, Stella A., Bourne, Elizabeth C., Gerphagnon, Mélanie, Grossart, Hans‐Peter, Gsell, Alena S., Ibelings, Bas W., Kagami, Maiko, Küpper, Frithjof C., Letcher, Peter M., Loyau, Adeline, Miki, Takeshi, Nejstgaard, Jens C., Rasconi, Serena, Reñé, Albert, Rohrlack, Thomas, Rojas‐Jimenez, Keilor, Schmeller, Dirk S., Scholz, Bettina, Seto, Kensuke, Sime‐Ngando, Télesphore, Sukenik, Assaf, Van de Waal, Dedmer B., Van den Wyngaert, Silke, Van Donk, Ellen, Wolinska, Justyna, Wurzbacher, Christian, and Agha, Ramsy
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- 2017
- Full Text
- View/download PDF
9. The new chytridiomycete Paradinomyces triforaminorum gen. et sp. nov. co-occurs with other parasitoids during a Kryptoperidinium foliaceum (Dinophyceae) bloom in the Baltic Sea
- Author
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Ministerio de Ciencia, Innovación y Universidades (España), Russian Science Foundation, Academy of Finland, Royal Society (UK), Agencia Estatal de Investigación (España), Reñé, Albert, Alacid, Elisabet, Vishnyakov, Andrey E., Seto, Kensuke, Tcvetkova, Victoria S., Gordi, Jordina, Kagami, Maiko, Kremp, Anke, Garcés, Esther, Karpov, Sergey A., Ministerio de Ciencia, Innovación y Universidades (España), Russian Science Foundation, Academy of Finland, Royal Society (UK), Agencia Estatal de Investigación (España), Reñé, Albert, Alacid, Elisabet, Vishnyakov, Andrey E., Seto, Kensuke, Tcvetkova, Victoria S., Gordi, Jordina, Kagami, Maiko, Kremp, Anke, Garcés, Esther, and Karpov, Sergey A.
- Abstract
A new chytrid genus and species was isolated and cultured from samples obtained in the Baltic Sea during a dinoflagellate bloom event. This species is characterized by having a spherical sporangium without papillae and zoospores of 2–3 µm in diameter that are released through 3 discharge pores. Molecular phylogeny based on ribosomal operon showed its sister position to the Dinomyces cluster in Rhizophydiales. Zoospores lack fenestrated cisternae but contain a paracrystalline inclusion, found in a Rhizophydiales representative for the first time. Additionally, the kinetid features are uncommon for Rhizophydiales and only observed in Dinomyces representatives so far. These morphological features and its phylogenetic relationships justify the description of the new genus and speciesParadinomyces triforaminorum gen. nov. sp. nov. belonging to the family Dinomycetaceae. The chytrid was detected during a high-biomass bloom of the dinoflagellate Kryptoperidinium foliaceum. Laboratory experiments suggest this species is highly specific and demonstrate the impact it can have on HAB development. The chytrid co-occurred with three other parasites belonging to Chytridiomycota (Fungi) and Perkinsea (Alveolata), highlighting that parasitic interactions are common during HABs in brackish and marine systems, and these multiple parasites compete for similar hosts
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- 2022
10. Supplement Figures from A diversified and segregated mRNA spliced-leader system in the parasitic Perkinsozoa
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Alacid, Elisabet, Irwin, Nicholas A. T., Smilansky, Vanessa, Milner, David S., Kilias, Estelle S., Leonard, Guy, and Richards, Thomas A.
- Abstract
Spliced-leader trans-splicing (SLTS) has been described in distantly related eukaryotes and acts to mark mRNAs with a short 5′ exon, giving different mRNAs identical 5′ sequence-signatures. The function of these systems is obscure. The Perkinsozoa encompasses a diversity of parasitic protists that infect bivalves, toxic-tide dinoflagellates, fish and frog tadpoles. Here, we report considerable sequence variation in the SLTS-system across the Perkinsozoa and find that multiple variant SLTS-systems are encoded in parallel in the important Perkinsozoa parasite Parvilucifera sinerae. These results demonstrate that the transcriptome of P. sinerae is segregated based on the addition of different spliced-leader (SL) exons. This segregation marks different gene categories, suggesting that SL-segregation relates to functional differentiation of the transcriptome. By contrast, both sets of gene categories are present in the single SL-transcript type sampled from Maranthos, implying that the SL-segregation of the Parvilucifera transcriptome is a recent evolutionary innovation. Furthermore, we show that the SLTS-system marks a subsection of the transcriptome with increased mRNA abundance and includes genes that encode the spliceosome system necessary for SLTS-function. Collectively, these data provide a picture of how the SLTS-systems can vary within a major evolutionary group and identify how transcriptional-complexity can be achieved through SL-segregation.
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- 2022
- Full Text
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11. New Perkinsea Parasitoids of Dinoflagellates Distantly Related to Parviluciferaceae Members
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Reñé, Albert, primary, Alacid, Elisabet, additional, Gallisai, Rachele, additional, Chambouvet, Aurélie, additional, Fernández-Valero, Alan D., additional, and Garcés, Esther, additional
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- 2021
- Full Text
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12. New Perkinsea Parasitoids of Dinoflagellates Distantly Related to Parviluciferaceae Members
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Reñé, Albert, Alacid, Elisabet, Gallisai, Rachele, Chambouvet, Aurélie, Fernández-valero, Alan D., Garcés, Esther, Reñé, Albert, Alacid, Elisabet, Gallisai, Rachele, Chambouvet, Aurélie, Fernández-valero, Alan D., and Garcés, Esther
- Abstract
Perkinsea is a phylogenetic group of protists that includes parasites of distantly related hosts. However, its diversity is still mainly composed of environmental sequences, mostly obtained from freshwater environments. Efforts to isolate and culture parasitoids of dinoflagellates have led to the description of several phylogenetically closely related species constituting the Parviluciferaceae family. In this study, two new parasitoid species infecting dinoflagellates during recurrent coastal blooms are reported. Using the ribosomal RNA (rRNA) gene phylogenies, we show that both cluster within Perkinsea, one of them at the base of Parviluciferaceae and the other in a distinct branch unrelated to other described species. The establishment of host-parasite lab cultures of the latter allowed its morphological characterization, resulting in the formal description of Maranthos nigrum gen. nov., sp. nov. The life-cycle development of the two parasitoids is generally the same as that of other members of the Parviluciferaceae family but they differ in the features of the trophont and sporont stages, including the arrangement of zoospores during the mature sporangium stage and the lack of specialized structures that release the zoospores into the environment. Laboratory cross-infection experiments showed that the parasitoid host range is restricted to dinoflagellates, although it extends across several different genera. The maximum prevalence reached in the tested host populations was lower than in other Parviluciferaceae members. The findings from this study suggest that Perkinsea representatives infecting dinoflagellates are more widespread than previously thought
- Published
- 2021
- Full Text
- View/download PDF
13. Host preferences of coexisting Perkinsea parasitoids during coastal dinoflagellate blooms
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Garcés, Esther, Timoneda Solé, Natàlia, Sampedro, Nagore, Alacid, Elisabet, Gallisai, Rachele, Gordi, Jordina, Fernández Valero, Alan D., Pernice, Massimo, Flo Arcas, Eva, Reñé, Albert, Garcés, Esther, Timoneda Solé, Natàlia, Sampedro, Nagore, Alacid, Elisabet, Gallisai, Rachele, Gordi, Jordina, Fernández Valero, Alan D., Pernice, Massimo, Flo Arcas, Eva, and Reñé, Albert
- Published
- 2021
14. Host preferences of coexisting Perkinsea parasitoids during coastal dinoflagellate blooms
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Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Royal Society (UK), Reñé, Albert, Timoneda Solé, Natàlia, Sampedro, Nagore, Alacid, Elisabet, Gallisai, Rachele, Gordi, Jordina, Fernández Valero, Alan D., Pernice, Massimo, Flo Arcas, Eva, Garcés, Esther, Ministerio de Ciencia e Innovación (España), Agencia Estatal de Investigación (España), Royal Society (UK), Reñé, Albert, Timoneda Solé, Natàlia, Sampedro, Nagore, Alacid, Elisabet, Gallisai, Rachele, Gordi, Jordina, Fernández Valero, Alan D., Pernice, Massimo, Flo Arcas, Eva, and Garcés, Esther
- Abstract
Parasites in aquatic systems are highly diverse and ubiquitous. In marine environments, parasite-host interactions contribute substantially to shaping microbial communities, but their nature and complexity remain poorly understood. In this study, we examined the relationship between Perkinsea parasitoids and bloom-forming dinoflagellate species. Our aim was to determine whether parasite-host species interactions are specific and whether the diversity and distribution of parasitoids are shaped by their dinoflagellate hosts. Several locations along the Catalan coast (NW Mediterranean Sea) were sampled during the blooms of five dinoflagellate species and the diversity of Perkinsea was determined by combining cultivation-based methods with metabarcoding of the V4 region of 18S rDNA. Most known species of Parviluciferaceae, and others not yet described, were detected, some of them coexisting in the same coastal location, and with a wide distribution. The specific parasite-host interactions determined for each of the studied blooms demonstrated the host preferences exhibited by parasitoids in nature. The dominance of a species within the parasitoid community is driven by the presence and abundances of its preferred host(s). The absence of parasitoid species, often associated with a low abundance of their preferred hosts, suggested that high infection rates are reached only under conditions that favour parasitoid propagation, especially dinoflagellate blooms
- Published
- 2021
15. Parasitoid chytridiomycete Ericiomyces syringoforeus gen. et sp. nov. has unique cellular structures to infect the host
- Author
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Russian Science Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Academy of Finland, Agencia Estatal de Investigación (España), Karpov, Sergey A., Reñé, Albert, Vishnyakov, Andrey E., Seto, Kensuke, Alacid, Elisabet, Paloheimo, Aurora, Kagami, Maiko, Kremp, Anke, Garcés, Esther, Russian Science Foundation, Ministerio de Ciencia, Innovación y Universidades (España), Academy of Finland, Agencia Estatal de Investigación (España), Karpov, Sergey A., Reñé, Albert, Vishnyakov, Andrey E., Seto, Kensuke, Alacid, Elisabet, Paloheimo, Aurora, Kagami, Maiko, Kremp, Anke, and Garcés, Esther
- Abstract
Many fungi have been identified as pathogens of marine algae. Among them, Chytridiomycota have been revealed as relatively highly abundant, but much of the diversity known within these groups is almost entirely based on environmental sequencing data. Here, we present a novel chytridiomycete genus and species, characterized by light microscopical observations, ultrastructure, and molecular phylogenetic analysis of the parasitic chytrid of brackish-water dinoflagellate Kryptoperidinium foliaceum from the Baltic Sea. Phylogenetic analysis of rDNA sequences and the ultrastructure of the strain reveals that it represents a new family in the order Rhizophydiales. Ericiomyces syringoforeus gen. et sp. nov. is a parasitoid with a life cycle composed by zoospores, which attach to the host, encyst, and produce a rhizoidal system (haustorium). Unlike typical Rhizophydiales chytrids, sporangium develops as a lateral outgrowth of the encysted zoospore. The ultrastructural study revealed at least two unique traits: the syringe-like organelle in the cyst, which supposed to paralyze the host, and funnel-shaped structure anchoring sporangium in the host wall. Sporangium matures and produces new zoospores within 3 days. Multiple infections are common and then the life cycle is 1–2 days shorter compared to the duration when a single infection occurred. Cross-infection experiments showed that E. syringoforeus could only infect dinoflagellates, being K. foliaceum highly susceptible to infection by the chytrid parasitoid. The effects of some fungal epidemics on populations of Kryptoperidinium are discussed
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- 2021
16. New Perkinsea Parasitoids of Dinoflagellates Distantly Related to Parviluciferaceae Members
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Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Royal Society (UK), Agence Nationale de la Recherche (France), Reñé, Albert, Alacid, Elisabet, Gallisai, Rachele, Chambouvet, Aurélie, Fernández Valero, Alan D., Garcés, Esther, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Royal Society (UK), Agence Nationale de la Recherche (France), Reñé, Albert, Alacid, Elisabet, Gallisai, Rachele, Chambouvet, Aurélie, Fernández Valero, Alan D., and Garcés, Esther
- Abstract
Perkinsea is a phylogenetic group of protists that includes parasites of distantly related hosts. However, its diversity is still mainly composed of environmental sequences, mostly obtained from freshwater environments. Efforts to isolate and culture parasitoids of dinoflagellates have led to the description of several phylogenetically closely related species constituting the Parviluciferaceae family. In this study, two new parasitoid species infecting dinoflagellates during recurrent coastal blooms are reported. Using the ribosomal RNA (rRNA) gene phylogenies, we show that both cluster within Perkinsea, one of them at the base of Parviluciferaceae and the other in a distinct branch unrelated to other described species. The establishment of host-parasite lab cultures of the latter allowed its morphological characterization, resulting in the formal description of Maranthos nigrum gen. nov., sp. nov. The life-cycle development of the two parasitoids is generally the same as that of other members of the Parviluciferaceae family but they differ in the features of the trophont and sporont stages, including the arrangement of zoospores during the mature sporangium stage and the lack of specialized structures that release the zoospores into the environment. Laboratory cross-infection experiments showed that the parasitoid host range is restricted to dinoflagellates, although it extends across several different genera. The maximum prevalence reached in the tested host populations was lower than in other Parviluciferaceae members. The findings from this study suggest that Perkinsea representatives infecting dinoflagellates are more widespread than previously thought
- Published
- 2021
17. Host preferences of coexisting Perkinsea parasitoids during coastal dinoflagellate blooms
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Reñé, Albert, primary, Timoneda, Natàlia, additional, Sampedro, Nagore, additional, Alacid, Elisabet, additional, Gallisai, Rachele, additional, Gordi, Jordina, additional, Fernández‐Valero, Alan D., additional, Pernice, Massimo C., additional, Flo, Eva, additional, and Garcés, Esther, additional
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- 2021
- Full Text
- View/download PDF
18. Description of two new coexisting parasitoids of blooming dinoflagellates in the Baltic sea: Parvilucifera catillosa sp. nov. and Parvilucifera sp. (Perkinsea, Alveolata)
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Academy of Finland, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Alacid, Elisabet, Reñé, Albert, Gallisai, Rachele, Paloheimo, Aurora, Garcés, Esther, Kremp, Anke, Academy of Finland, Ministerio de Ciencia, Innovación y Universidades (España), Agencia Estatal de Investigación (España), Alacid, Elisabet, Reñé, Albert, Gallisai, Rachele, Paloheimo, Aurora, Garcés, Esther, and Kremp, Anke
- Abstract
Perkinsea are a group of intracellular protist parasites that inhabit all types of aquatic environments and cause significant population declines of a wide variety of hosts. However, the diversity of this lineage is mostly represented by environmental rDNA sequences. Complete descriptions of Perkinsea that infect marine dinoflagellates have increased in recent literature due to the identification, isolation and culturing of representatives during bloom events, contributing to expand the knowledge on the diversity and ecology of the group. Shallow coastal areas in the Baltic Sea suffer seasonal dinoflagellate blooms. In summer 2016, two parasitoids were isolated during a Kryptoperidinium foliaceum bloom in the Baltic Sea. Morphological features and sequences of the small and large subunit of the ribosomal DNA gene revealed these two parasitoids were new species that belong to the genus Parvilucifera. This is the first time that Parvilucifera infections are reported in the Inner Baltic Sea. The first species, Parvilucifera sp. has some morphological and phylogenetic features in common with P. sinerae and P. corolla, although its ultrastructure could not be studied and the formal description could not be done. The second new species, named Parvilucifera catillosa, has several distinct morphological features in its zoospores (e.g. the presence of a rostrum), and in the shape and size of the apertures in the sporangium stage, which are larger and more protuberant than in the other species of the genus. Infections observed in the field and cross-infection experiments determined that the host range of both Parvilucifera species was restricted to dinoflagellates, each one showing a different host preference. The coexistence in the same environment by the two closely related parasitoids with very similar life cycles suggests that their niche separation is the preferred host
- Published
- 2020
19. Description of two new coexisting parasitoids of blooming dinoflagellates in the Baltic sea: Parvilucifera catillosa sp. nov. and Parvilucifera sp. (Perkinsea, Alveolata)
- Author
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Alacid, Elisabet, primary, Reñé, Albert, additional, Gallisai, Rachele, additional, Paloheimo, Aurora, additional, Garcés, Esther, additional, and Kremp, Anke, additional
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- 2020
- Full Text
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20. Marine toxic dinoflagellate release extracellular vesicles
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Garcés, Esther, Alacid, Elisabet, Gallisai, Rachele, López-Puerto, Laura, Jiménez-Alesanco, Ana, and Closa, Daniel
- Abstract
The 18th International Conference on Harmful Algae (ICHA), From ecosystems to socio-ecosystems, 21-26 October 2018, Nantes, France.-- 1 page, Effective communication between microorganisms in the marine environment is needed to mediate many ecological processes. Recent research has shown that extracellular vesicles (EVs) are produced by cyanobacteria and haptophytes and these vesicles are reported as vectors to deliver biologically active molecules involved in trophic interactions. But, little is known about the involvement of EVs in microorganism physiology and population dynamics. In this study, we explored the production of EVs by a microalgal culture of Alexandrium minutum, dinoflagellate responsible for large-scale coastal blooms and paralytic shellfish poisoning, a human disease that has adversely impacted many coastal ecosystems worldwide. The presence of EVs during the exponential phase of culture growth was assessed in isolated particles that were lipid-stained and then examined by transmission electron microscopy. Fluorescence images revealed stained vesicles, and the micrographs showed spherical vesicles (exosome-like structures)
- Published
- 2018
21. Patterns of bacterioplankton diversity and community structure along contrasting cross-shore environmental gradients in the northwestern Mediterranean coast
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Ferrera, Isabel, Auladell Martin, Adria, Reñé, Albert, Alacid, Elisabet, Basterretxea, Gotzon, and Garcés, Esther
- Abstract
Association for the Sciences of Limnology and Oceanography (ASLO) Summer meeting, Water connects!, 10-15 June 2018, Victoria, Canada
- Published
- 2018
22. Parásitos de microalgas, los pequeños grandes desconocidos
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Alacid, Elisabet, Reñé, Albert, Alacid, Elisabet, and Reñé, Albert
- Abstract
Muchas de las especies que parasitan las floraciones algales están aún por descubrir. Las zonas costeras de todo el mundo se ven a menudo afectadas por episodios de proliferaciones algales nocivas. Estos episodios los causan mayormente microalgas del grupo de los dinoflagelados, los cuales tienen un efecto nocivo tanto para el propio ecosistema como para la economía y la salud humana debido a su toxicidad. Aunque estas proliferaciones y sus causas han sido ampliamente estudiadas, algunos de sus enemigos naturales, los parásitos, han pasado inadvertidos. El pequeño tamaño de su fase infectiva (entre 2 y 5 micrómetros) y la heterogeneidad de morfologías que adquieren durante su ciclo biológico hacen de estos parásitos los pequeños grandes desconocidos del ecosistema marino costero. El uso de novedosas técnicas moleculares ha permitido determinar el importante papel que desempeña el parasitismo en las comunidades de protistas marinos. Combinadas con las técnicas de microscopía más avanzadas, han empezado a desvelar la enorme diversidad de los parásitos de microalgas, de los que se han descrito un gran número de especies nuevas. Los parásitos, que acaban matando a la microalga en la que se hospedan para completar su ciclo biológico, pertenecen a grupos filogenéticos diversos. Pueden actuar como ecto o endoparásitos según si infectan a su huésped adhiriéndose a él desde el exterior o si penetran en su interior. En nuestro grupo de investigación nos dedicamos a estudiar la diversidad y ecología de los parásitos de dinoflagelados en el medio marino. La determinación de su impacto en las floraciones algales y el estudio de las interacciones que se establecen entre el parásito y el huésped a escala molecular permitirán una mejor comprensión de la función que cumplen estos diminutos organismos en el ecosistema marino
- Published
- 2018
23. Cross-Shore Environmental Gradients in the Western Mediterranean Coast and Their Influence on Nearshore Phytoplankton Communities
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Ministerio de Economía y Competitividad (España), Basterretxea, Gotzon, Torres, F.J., Alacid, Elisabet, Anglès, Silvia, Camp, Jordi, Ferrera, Isabel, Flo Arcas, Eva, Font-Muñoz, Joan S., Jordi, Antoni, Reñé, Albert, Salgado, Paula M., Sampedro, Nagore, Garcés, Esther, Ministerio de Economía y Competitividad (España), Basterretxea, Gotzon, Torres, F.J., Alacid, Elisabet, Anglès, Silvia, Camp, Jordi, Ferrera, Isabel, Flo Arcas, Eva, Font-Muñoz, Joan S., Jordi, Antoni, Reñé, Albert, Salgado, Paula M., Sampedro, Nagore, and Garcés, Esther
- Abstract
During summer, when oligotrophic conditions prevail offshore in the Mediterranean Sea, enhanced phytoplankton stripes are often observed in nearshore waters. In this study, we examine the cross-shore hydrographic variability and the associated microbial plankton communities in this zone. Detailed cross-shore underway sampling at 47 coastal sites spread along the Balearic and Catalan coasts revealed the widespread existence of narrow bands of warm and decreased salinity water beholding high phytoplankton biomass (up to 50-fold vs. offshore chlorophyll). Most intense physical and biological anomalies along these transects were generally constrained to the first hundred meters from the shoreline (i.e., a transition zone starting at ~400 m). We use Principal Component Analysis (PCA) and k-means cluster analysis to categorize temperature, salinity and chlorophyll (T, S and Chl) in three main types of cross-shore trends. Prevalence of exponential-shaped Chl trends was observed particularly in areas with shoreward directed winds (B1-type). The other two trends (B2 and B3) presented variations offthe coast produced by alongshore structures like river plumes, city outfalls and other features. Exponential-shaped cross-shore chlorophyll distribution (B1-type) accumulated 90% of the total transect Chl variation in the first 367 ± 190 m from the shoreline, whereas this distance was variable in the other profile types. Repeated daily sampling at one site with this transect typology revealed that wind forcing variations produced fast response on cross-shore T and S properties. Chl was less sensitive to changes at this time-scale. Phytoplankton communities exhibited site-dependent responses to the nearshore environment. Pico- and nanoplankton assemblages, typically dominating coastal assemblages during summer in the Mediterranean Sea, showed lower cross-shore variation. Conversely, larger response to nearshore conditions was observed in microplankton populations. These larger cells
- Published
- 2018
24. Marine parasitism in high-biomass microalgal blooms
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Garcés, Esther, Alacid, Elisabet, Reñé, Albert, and Camp, Jordi
- Subjects
fungi - Abstract
Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Sciences Meeting, Mountains of the Sea, 26 February - 3 March 2017, Honolulu, Hawai`i, The idea that the diversity of a community influences pathogen transmission and dynamics can be traced back over 50 years, when C.S. Elton observed that ¿outbreaks (of infectious diseases) most often happen on cultivate or planted land¿ that is, in habitats and communities very much simplified by man!¿ Our current understanding of the ecological framework of host-parasite interactions suggests that, regarding parasite emergence and transmission, host community structure gives rise to amplification, neutral, or dilution effects. Thus, in our investigation of low-diversity microbial communities in the marine ecosystem, we focused on the high-biomass blooms of dinoflagellates that exist locally but only transiently in coastal waters. We therefore looked closely at the interactions between bloom-forming dinoflagellates as hosts and members of the genus Parvilucifera (Perkinsozoa, Alveolata), their generalist parasitoids. The presence of these parasitoids was detected recurrently in every high-density bloom of different dinoflagellate species, showing that the bloom state favors parasitic epidemics. Interestingly, despite the coexistence of several parasitoid species at a given site, most infections were caused by only one species, which differed depending on the species of blooming host. The biological system described herein can be used to examine whether it is the density or the diversity of the host community that is the main determinant of parasite emergence and transmission
- Published
- 2017
25. Cross-Shore Environmental Gradients in the Western Mediterranean Coast
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Basterretxea, Gotzon, Torres, F.J., Alacid, Elisabet, Font-Muñoz, Joan S., Camp, Jordi, and Garcés, Esther
- Abstract
Association for the Sciences of Limnology and Oceanography (ASLO) Aquatic Sciences Meeting, Mountains of the Sea, 26 February - 3 March 2017, Honolulu, Hawai`i, Nearshore shallow waters (i.e. < 2 km from the coast and < 20 m depth) represent a transitional area between land and open ocean where key marine ecological processes occur. During summer, when oligotrophic conditions prevail offshore in the Mediterranean Sea, an alongshore zone with enhanced phytoplankton biomass is often evidenced in these waters. Here, using continuous underway measurements as well as discrete samples, we describe the cross-shore environmental typology and the associated microbial planktonic communities of these waters. Cross-shore temperature, salinity and fluorescence transects obtained from coast to offshore reveal widespread presence of modified water bands generated by nearshore temperature warming and diffuse groundwater discharges in the Mediterranean Sea. Intense phytoplankton biomass buildup was associated with these modified waters (up to 50 fold offshore chlorophyll). We show that the physical and chemical characteristics of this nearshore stripe dramatically vary at scales of hours following a diurnal cycle that is regulated by heating and wind forcing. Plankton communities characterized by increased microplankton and bacterioplankton populations are able to actively exploit these nearshore conditions, constituting an independent and distinct assemblage from that prevailing further offshore. Our study argues the relevance of the formation of a nearshore niche and its temporal stability for the development of a distinct microbial community which could eventually favor the emergence of harmful algal blooms
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- 2017
26. Taxonomical resolution and distribution of bacterioplankton along the vertical gradient reveals pronounced spatio-temporal patterns in contrasted temperate freshwater Lakes
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Frenken, Thijs, Alacid, Elisabet, Berger, Stella, Bourne, Elizabeth, Gerphagnon, Mélanie, Grossart, Hans-Peter, Gsell, Alena, Ibelings, Bas, Kagami, Maiko, Küpper, Frithjof, Letcher, Peter, Loyau, Adeline, Miki, Takeshi, Nejstgaard, Jens, Rasconi, Serena, Reñé, Albert, Rohrlack, Thomas, Rojas-Jimenez, Keilor, Schmeller, Dirk, Scholz, Bettina, Seto, Kensuke, Sukenik, Assaf, Van de Waal, Dedmer, Van den Wyngaert, Silke, van Donk, Ellen, Wolinska, Justyna, Wurzbacher, Christian, Agha, Ramsy, Keshri, J., Pradeep Ram, A., Nana, P., Sime-Ngando, Télesphore, Laboratoire Microorganismes : Génome et Environnement (LMGE), Université Clermont Auvergne [2017-2020] (UCA [2017-2020])-Centre National de la Recherche Scientifique (CNRS), Leibniz Institute of Freshwater Ecology and Inland Fisheries (IGB), Université Blaise Pascal - Clermont-Ferrand 2 (UBP)-Université d'Auvergne - Clermont-Ferrand I (UdA)-Centre National de la Recherche Scientifique (CNRS), Limnology of Stratified Lakes, IGB-Neuglobsow, Department of Environmental Sciences, Faculty of Science Engineering, Tokyo, University of Aberdeen, Helmholtz Centre for Environmental Research (UFZ), Institute of Marine Sciences / Institut de Ciències del Mar [Barcelona] (ICM), Consejo Superior de Investigaciones Científicas [Spain] (CSIC), Israel Oceanographic and Limnological Research - IOLR (ISRAEL), Netherlands Inst Ecol NIOO KNAW, Dept Aquat Ecol, Wageningen, Netherlands, Leibniz-Institut für Gewässerökologie und Binnenfischerei (IGB), Leibniz Association, Laboratoire Microorganismes : Génome et Environnement - Clermont Auvergne (LMGE), and Université Clermont Auvergne (UCA)-Centre National de la Recherche Scientifique (CNRS)
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0301 basic medicine ,030106 microbiology ,Soil Science ,[SDV.MP.PRO]Life Sciences [q-bio]/Microbiology and Parasitology/Protistology ,03 medical and health sciences ,Microbial ecology ,Sulfurimonas ,RNA, Ribosomal, 16S ,Proteobacteria ,Dominance (ecology) ,Bacteriophages ,14. Life underwater ,Ecosystem ,Phylogeny ,Ecology, Evolution, Behavior and Systematics ,ComputingMilieux_MISCELLANEOUS ,Ecological niche ,Bacteria ,Ecology ,biology ,Bacteroidetes ,Microbiota ,Temperature ,Biodiversity ,Bacterioplankton ,Plankton ,biology.organism_classification ,[SDV.MP.BAC]Life Sciences [q-bio]/Microbiology and Parasitology/Bacteriology ,6. Clean water ,Actinobacteria ,Lakes ,UniFrac ,France ,Seasons ,Water Microbiology - Abstract
We examined the relationship between viruses and co-occurring bacterial communities across spatiotemporal scale in two contrasting freshwater lakes, namely meromictic Lake Pavin and dimictic Lake Aydat (Central France). Next-generation sequencing of 16S rRNA genes suggested distinct patterns in bacterioplankton community composition (BCC) between the lakes over depths and seasons. BCC were generally dominated by members of Actinobacteria, Proteobacteria, and Bacteroidetes covering about 95% of all sequences. Oxygen depletion at the bottom waters in Aydat and existence of permanent anoxia in the monimolimnion of Pavin resulted in the occurrence and dominance of lesser known members of lake communities such as Methylotenera, Methylobacter, Gallionella, Sulfurimonas, and Syntrophus in Pavin and Methylotenera and Sulfuritalea in Aydat. Differences in BCC appeared strongly related to dissolved oxygen concentration, temperature, viral infection, and virus-to-bacteria ratio. UniFrac analysis indicated a clear distinction in BCC when the percentage of viral infected bacterial cells and virus-to-bacteria ratio exceeded a threshold level of 10% and 5, respectively, suggesting a link between viruses and their potential bacterial host communities. Our study revealed that in both the lakes, the prevailing environmental factors across time and space structured and influenced the adaptation of bacterial communities to specific ecological niches.
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- 2017
27. Diversity, biogeography and host species of the parasitoid genus Parvilucifera (Perkinsozoa, Alveolata)
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Reñé, Albert, Alacid, Elisabet, Rodríguez, Francisco, Ferrera, Isabel, and Garcés, Esther
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fungi - Abstract
17th International Conference on Harmful Algae (ICHA), 9-14 October 2016, Florianópolis, Santa Catarina, Brazil.-- 1 page, The genus Parvilucifera (Perkinsozoa, Alveolata) comprises parasitoid species that infect dinoflagellates. However, they are scarcely reported and little is known about their diversity, distribution, habitat and host range. Such aspects have been explored in this study either at the regional scale of Spain and at global scale. At regional scale, we commonly reported them during harmful algal bloom events, infecting toxic or bloom-forming dinoflagellates like Alexandrium minutum, Dinophysis sacculus, Barrufeta bravensis, Prorocentrum micans or Durinskia baltica. These parasitoids seem to be well-adapted to the ecology of their blooming hosts given that the high reproduction rate of Parvilucifera and their density-dependent transmission allow a rapid increase of the parasitoid population during the outbreaks of its hosts. Several species of Parvilucifera were recurrently detected, sometimes coexisting at the same location, and clearly some of them represent new diversity yet to be described. At global scale, most of the diversity of Perkinsozoa in marine waters worldwide is only represented by unidentified environmental sequences. During recent years, extensive studies have been conducted to explore the diversity of marine protists using high-throughput sequencing techniques, including circumnavigation cruises (BioMarks, Ocean Sampling Day, Malaspina, Tara). We have used some available datasets to study the presence of the different species of Parvilucifera. The results obtained suggest a global distribution of Parvilucifera and its preference for coastal and shallow environments, in agreement with its infection strategy
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- 2016
28. Is planktonic biodiversity monitoring useful for the assessment of environmental status of marine waters?
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Ferrera, Isabel, Reñé, Albert, Alacid, Elisabet, Flo Arcas, Eva, Massana, Ramon, Camp, Jordi, Gasol, Josep M., and Garcés, Esther
- Abstract
DEVOTES Final Conference : Marine Biodiversity, the key to healthy and productive seas, 17-19 October 2016, Brussels
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- 2016
29. Cross-Shore Environmental Gradients in the Western Mediterranean Coast and Their Influence on Nearshore Phytoplankton Communities
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Basterretxea, Gotzon, primary, Torres-Serra, Francisco J., additional, Alacid, Elisabet, additional, Anglès, Sílvia, additional, Camp, Jordi, additional, Ferrera, Isabel, additional, Flo, Eva, additional, Font-Muñoz, Joan S., additional, Jordi, Antoni, additional, Reñé, Albert, additional, Salgado-Hernanz, Paula M., additional, Sampedro, Nagore, additional, and Garcés, Esther, additional
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- 2018
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30. Integrating chytrid fungal parasites into plankton ecology: research gaps and needs
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Sub Ecology and Biodiversity, Ecology and Biodiversity, Frenken, Thijs, Alacid, Elisabet, Berger, Stella A., Bourne, Elizabeth C., Gerphagnon, Mélanie, Grossart, Hans-Peter, Gsell, Alena S., Ibelings, Bas W., Kagami, Maiko, Küpper, Frithjof C., Letcher, Peter M., Loyau, Adeline, Miki, Takeshi, Nejstgaard, Jens C., Rasconi, Serena, Reñé, Albert, Rohrlack, Thomas, Rojas-Jimenez, Keilor, Schmeller, Dirk S., Scholz, Bettina, Seto, Kensuke, Sime-Ngando, Télesphore, Sukenik, Assaf, Van de Waal, Dedmer B., Van den Wyngaert, Silke, Van Donk, Ellen, Wolinska, Justyna, Wurzbacher, Christian, Agha, Ramsy, Sub Ecology and Biodiversity, Ecology and Biodiversity, Frenken, Thijs, Alacid, Elisabet, Berger, Stella A., Bourne, Elizabeth C., Gerphagnon, Mélanie, Grossart, Hans-Peter, Gsell, Alena S., Ibelings, Bas W., Kagami, Maiko, Küpper, Frithjof C., Letcher, Peter M., Loyau, Adeline, Miki, Takeshi, Nejstgaard, Jens C., Rasconi, Serena, Reñé, Albert, Rohrlack, Thomas, Rojas-Jimenez, Keilor, Schmeller, Dirk S., Scholz, Bettina, Seto, Kensuke, Sime-Ngando, Télesphore, Sukenik, Assaf, Van de Waal, Dedmer B., Van den Wyngaert, Silke, Van Donk, Ellen, Wolinska, Justyna, Wurzbacher, Christian, and Agha, Ramsy
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- 2017
31. Biodiversitat i funció en microorganismes marins: una finestra per estudiar la importància i la complexitat de l'ecosistema costaner
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Garcés, Esther, Alacid, Elisabet, Ferrera, Isabel, Balagué, Vanessa, Forn, Irene, Garcés, Esther, Alacid, Elisabet, Ferrera, Isabel, Balagué, Vanessa, and Forn, Irene
- Abstract
El curs se centra en l'estudi de les espècies de microorganismes dels ecosistemes marins i els factors que regulen la seva abundància. Concretament, s'abordaran els factors que regulen l’estructura de la comunitat de microorganismes i com la variabilitat del clima i les pertorbacions humanes afecten els ecosistemes marins de la zona costanera del Mediterran
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- 2017
32. Host range and specificity of Dinovorax pyriformis, a new parasitoid of harmful marine dinoflagellates
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Alacid, Elisabet, Moll, Neus, Alacid, Elisabet, and Moll, Neus
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- 2017
33. Host-parasite interactions: The Parvilucifera sinerae model in marine microalgae
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Garcés, Esther, Alacid, Elisabet, Garcés, Esther, and Alacid, Elisabet
- Abstract
[CAT] El parasitisme és una interacció generalitzada, que ha evolucionat pràcticament en totes les branques de l’arbre de la vida. Històricament no s’ha tingut en compte en l’estudi dels sistemes microbians marins, limitant el coneixement de les xarxes tròfiques marines i dels ciclesbiogeoquímics. Recentment, les eines moleculars han revelat moltes associacions hoste-paràsit fins ara desconegudes, situant els paràsits com a components clau de les comunitats planctòniques i bentòniques marines. El fitoplàncton sosté la major part de la producció primària, i de vegades causa proliferacions massives que poden tenir conseqüències negatives per als éssers humans i l’ecosistema. Les proliferacions de dinoflagel·lades sovint tenen lloc en la zona costanera, i col·locorren amb paràsits de tipus zoosporic. En ocasions concretes, les infeccions causades pels paràsits poden ser la causa principal de mortalitat de les dinoflagel·lades, regulant la fi de la proliferació, de manera que s’ha suggerit el seu ús com a agents de control biològic. En la actualitat, hi ha descrits tres grups de paràsits eucariotes de dinoflagel·lades: els Amoebophrya (Sindinial), els Parvilucifera (Perkinsozoa) i els Dinomyces (Chytridiomycota). Ja que aquests paràsits poden controlar l’abundància dels seus hostes, poden afectar la dinàmica del fitoplàncton, l’estructura de la comunitat i la seva diversitat. Tanmateix, se sap molt poc sobre la seva ecologia i diversitat. [...], [EN] Parasitism is a widespread interaction that has evolved practically in all branches of the tree of life. It has historically been neglected in studies of marine microbial systems, limiting our understanding of marine food webs and biogeochemical cycles. Molecular tools have recently revealed many new host-parasite associations, placing parasites as key components of coastal marine planktonic and benthic communities. Phytoplankton sustains most of the marine primary production, sometimes causing massive proliferations or blooms, which may have negative consequences for humans and the ecosystem. Dinoflagellate blooms often occur in coastal areas, sometimes in co-occurrence with zoosporic parasite species. Occasionally, parasitic infections may be the main cause of dinoflagellate mortality, which can modulate bloom termination and consequently, their use has been suggested to biologically control natural blooms. Up to date, three groups of eukaryotic parasites of dinoflagellates have been described: Amoebophrya (Syndiniales), Parvilucifera (Perkinsozoa) and Dinomyces (Chytridiomycota). Such parasites can control the abundance of their hosts populations, and hence they can also affect phytoplankton dynamics, community structure and diversity. However, very little is still known about the ecology and diversity of these parasites, especially Parvilucifera and Dinomyces. [...]
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- 2017
34. Integrating chytrid fungal parasites into plankton ecology: research gaps and needs
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Leibniz-Institute of Freshwater Ecology and Inland Fisheries, University of Akureyri, Netherlands Organization for International Cooperation in Higher Education, Frenken, Thijs, Alacid, Elisabet, Reñé, Albert, Agha, Ramsy, Leibniz-Institute of Freshwater Ecology and Inland Fisheries, University of Akureyri, Netherlands Organization for International Cooperation in Higher Education, Frenken, Thijs, Alacid, Elisabet, Reñé, Albert, and Agha, Ramsy
- Abstract
Chytridiomycota, often referred to as chytrids, can be virulent parasites with the potential to inflict mass mortalities on hosts, causing e.g. changes in phytoplankton size distributions and succession, and the delay or suppression of bloom events. Molecular environmental surveys have revealed an unexpectedly large diversity of chytrids across a wide range of aquatic ecosystems worldwide. As a result, scientific interest towards fungal parasites of phytoplankton has been gaining momentum in the past few years. Yet, we still know little about the ecology of chytrids, their life cycles, phylogeny, host specificity and range. Information on the contribution of chytrids to trophic interactions, as well as co-evolutionary feedbacks of fungal parasitism on host populations is also limited. This paper synthesizes ideas stressing the multifaceted biological relevance of phytoplankton chytridiomycosis, resulting from discussions among an international team of chytrid researchers. It presents our view on the most pressing research needs for promoting the integration of chytrid fungi into aquatic ecology
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- 2017
35. In situ Occurrence, Prevalence and Dynamics of Parvilucifera Parasitoids during Recurrent Blooms of the Toxic Dinoflagellate Alexandrium minutum
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Consejo Superior de Investigaciones Científicas (España), Alacid, Elisabet, Reñé, Albert, Camp, Jordi, Garcés, Esther, Consejo Superior de Investigaciones Científicas (España), Alacid, Elisabet, Reñé, Albert, Camp, Jordi, and Garcés, Esther
- Abstract
Dinoflagellate blooms are natural phenomena that often occur in coastal areas, which in addition to their large number of nutrient-rich sites are characterized by highly restricted hydrodynamics within bays, marinas, enclosed beaches, and harbors. In these areas, massive proliferations of dinoflagellates have harmful effects on humans and the ecosystem. However, the high cell density reached during blooms make them vulnerable to parasitic infections. Under laboratory conditions parasitoids are able to exterminate an entire host population. In nature, Parvilucifera parasitoids infect the toxic dinoflagellate Alexandrium minutum during bloom conditions but their prevalence and impact remain unexplored. In this study, we evaluated the in situ occurrence, prevalence, and dynamics of Parvilucifera parasitoids during recurrent blooms of A. minutum in a confined site in the NW Mediterranean Sea as well as the contribution of parasitism to bloom termination. Parvilucifera parasitoids were recurrently detected from 2009 to 2013, during seasonal outbreaks of A. minutum. Parasitic infections in surface waters occurred after the abundance of A. minutum reached 104–105 cells L−1, suggesting a density threshold beyond which Parvilucifera transmission is enhanced and the number of infected cells increases. Moreover, host and parasitoid abundances were not in phase. Instead, there was a lag between maximum A. minutum and Parvilucifera densities, indicative of a delayed density-dependent response of the parasitoid to host abundances, similar to the temporal dynamics of predator-prey interactions. The highest parasitoid prevalence was reached after a peak in host abundance and coincided with the decay phase of the bloom, when a maximum of 38% of the A. minutum population was infected. According to our estimates, Parvilucifera infections accounted for 5–18% of the total observed A. minutum mortality, which suggested that the contribution of parasitism to bloom termination is similar t
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- 2017
36. Evolutionary Trends of Perkinsozoa (Alveolata) Characters Based on Observations of Two New Genera of Parasitoids of dinoflagellates, Dinovorax gen. nov. and Snorkelia gen. nov.
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Consejo Superior de Investigaciones Científicas (España), Reñé, Albert, Alacid, Elisabet, Ferrera, Isabel, Garcés, Esther, Consejo Superior de Investigaciones Científicas (España), Reñé, Albert, Alacid, Elisabet, Ferrera, Isabel, and Garcés, Esther
- Abstract
Parasites are one of the ecologically most relevant groups of marine food webs, but their taxonomic and biological complexity hampers the assessment of their diversity and evolutionary trends. Moreover, the within-host processes that govern parasitoid infection, development and reproduction are often unknown. In this study, we describe a new species of a perkinsozoan endoparasitoid that infects the toxic dinoflagellate Dinophysis sacculus, by including observations of its morphology, ultrastructure, life-cycle development and phylogeny. The SSU rDNA sequence and main morphological features were also obtained for a second parasitoid species infecting the bloom-forming dinoflagellate Levanderina fissa. Phylogenetic analyses including the sequences obtained show that all known Perkinsozoa species infecting dinoflagellates cluster together. However, sequences of Parvilucifera prorocentri and those obtained in this study cluster at the base of the clade, while the rest of Parvilucifera representatives form a separated highly-supported cluster. These results, together with differing morphological characters like the formation of a germ-tube, the presence of trichocysts, or the heterochromatin presence in zoospores nucleus justify the erection of Dinovorax pyriformis gen. nov. et sp. nov., and Snorkelia prorocentri gen. nov. et comb. nov. (=Parvilucifera prorocentri). The morphological features and phylogenetic position of these parasitoids represent ancestral characters for the Perkinsozoa phylum, and also for Dinozoa clade, allowing the inference of the evolutionary framework of these Alveolata members
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- 2017
37. Life-cycle, ultrastructure, and phylogeny of Parvilucifera corolla sp. nov. (Alveolata, Perkinsozoa), a parasitoid of dinoflagellates
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Consejo Superior de Investigaciones Científicas (España), Reñé, Albert, Alacid, Elisabet, Figueroa, Rosa Isabel, Rodríguez Hernández, Francisco José, Garcés, Esther, Consejo Superior de Investigaciones Científicas (España), Reñé, Albert, Alacid, Elisabet, Figueroa, Rosa Isabel, Rodríguez Hernández, Francisco José, and Garcés, Esther
- Abstract
Recent studies of marine protists have revealed parasites to be key components of marine communities. Here we describe a new species of the parasitoid genus Parvilucifera that was observed infecting the dinoflagellate Durinskia baltica in salt marshes of the Catalan coast (NW Mediterranean). In parallel, the same species was detected after the incubation of seawater from the Canary Islands (Lanzarote, NE Atlantic). The successful isolation of strains from both localities allowed description of the life cycle, ultrastructure, and phylogeny of the species. Its infection mechanism consists of a free-living zoospore that penetrates a dinoflagellate cell. The resulting trophont gradually degrades the dinoflagellate cytoplasm while growing in size. Once the host is consumed, schizogony of the parasitoid yields a sporocyte. After cytokinesis is complete, the newly formed zoospores are released into the environment and are ready to infect new host cells. A distinguishing feature of the species is the radial arrangement of its zoospores around the central area of the sporocyte during their formation. The species shows a close morphological similarity with other species of the genus, including P. infectans, P. sinerae, and P. rostrata
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- 2017
38. Marine zoosporic parasites of dinoflagellates
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Alacid, Elisabet, Reñé, Albert, Kremp, Anke, Palehimo, A., Ferrera, Isabel, and Garcés, Esther
- Abstract
2nd Plankton Chytridiomycosis Workshop, 15-17 September 2016, Skagaströnd, Iceland
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- 2016
39. Parasitoid-host interactions: Parvilucifera sinerae killing dinoflagellates, from the cell to the field
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Alacid, Elisabet, Reñé, Albert, and Garcés, Esther
- Abstract
European Molecular Biology Organization (EMBO) Symposia, A New Age of Discovery for Aquatic Microeukaryotes, 6-29 January 2016, Heidelberg, Germany
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- 2016
40. Cross-shore environmental gradients in Mediterranean nearshore waters
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Basterretxea, Gotzon, Jordi, Antoni, Torres, F.J., Font-Muñoz, Joan S., Salgado, Paula M., Anglès, Silvia, Alacid, Elisabet, Camp, Jordi, Flo Arcas, Eva, Reñé, Albert, Sampedro, Nagore, Garcés, Esther, and Ministerio de Economía y Competitividad (España)
- Abstract
V Simposio Internacional de Ciencias del Mar, 20-22 July 2016, Alicante.-- 2 pages, During summer, when oligotrophic conditions prevail offshore in the Mediterranean Seea, an alongshore zone with enhanced phytoplankton biomass is ofteen evidenced in these waters. Here, using high continuous measurements of temperature, salinity and fluorrescence as well as discrete samples and primary production experiments, we examine the cross-shore typology and the associated chemical and biological characteristics of these waters. Data from three coastal regions in the NW Mediterranean revealed widespread presence of lower water density bands in the proximity of the shoreline generated by increased warming and groundwater seeps through the coastal sediments. Most often, enhanced phytoplankton biomass (max=9.6 mg Chla m3; up to 16 fold offshore chlorophyll) was associated with these modified waters and exponentially decayed in the offshore direction. Gradient characteristics are highly variable but the main onshore-offshore features, determined by terrestrial loads and hydrodynamics are locally consistent. Important variations were observed in the structure of the communities among nearshore sites which were attributed to variations in the geochemical conditions. Our study argues the relevance of the formation of a groundwater-sustained nearshore niche and its temporal stability for the development of a distinct community which could eventually favor the emergence of harmful algal blooms, This work was financed by the MINECO grant GRADIENTS (CTM2012-39476--C02)
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- 2016
41. In situ Occurrence, Prevalence and Dynamics of Parvilucifera Parasitoids during Recurrent Blooms of the Toxic Dinoflagellate Alexandrium minutum
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Alacid, Elisabet, primary, Reñé, Albert, additional, Camp, Jordi, additional, and Garcés, Esther, additional
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- 2017
- Full Text
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42. Evolutionary Trends of Perkinsozoa (Alveolata) Characters Based on Observations of Two New Genera of Parasitoids of dinoflagellates, Dinovorax gen. nov. and Snorkelia gen. nov.
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Reñé, Albert, primary, Alacid, Elisabet, additional, Ferrera, Isabel, additional, and Garcés, Esther, additional
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- 2017
- Full Text
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43. Life-cycle, ultrastructure, and phylogeny of Parvilucifera corolla sp. nov. (Alveolata, Perkinsozoa), a parasitoid of dinoflagellates
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Reñé, Albert, primary, Alacid, Elisabet, additional, Figueroa, Rosa Isabel, additional, Rodríguez, Francisco, additional, and Garcés, Esther, additional
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- 2017
- Full Text
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44. Genetic and phenotypic diversity characterization of natural populations of the parasitoid Parvilucifera sinerae
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Figueroa, Rosa Isabel, Turon, Marta, Alacid, Elisabet, Reñé, Albert, Bravo, Isabel, Ramilo, Isabel, and Garcés, Esther
- Abstract
VII European Congress of Protistology (ECP) in partnership with The International Society of Protistologists (ISOP), 5-10 September 2015, Sevilla, Spain
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- 2015
45. Chytrids in the marine environment: a black box to be open
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Alacid, Elisabet, Reñé, Albert, Garcés, Esther, Massana, Ramon, and Ferrera, Isabel
- Abstract
1st Plankton Chytridiomycosis Workshop, 19-24 July 2015, Berlin
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- 2015
46. Host-parasitoid interactions: Parvilucifera sinerae infecting toxic marine dinoflagellates
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Alacid, Elisabet, Reñé, Albert, Park, Myung G., Turon, Marta, and Garcés, Esther
- Abstract
VII European Congress of Protistology (ECP) in partnership with The International Society of Protistologists (ISOP), 5-10 September 2015, Sevilla, Spain
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- 2015
47. Finescale nearshore physico-chemical variability and associated plankton communities
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Basterretxea, Gotzon, Jordi, Antoni, Torres, F.J., Font-Muñoz, Joan S., Álvarez-Ellacuria, Itziar, Flo Arcas, Eva, Alacid, Elisabet, Reñé, Albert, Sampedro, Nagore, Ferrera, Isabel, and Garcés, Esther
- Abstract
55 Conference Estuarine Coastal Sciences Association (ECSA 55), Unbounded boundaries and shifting baselines: Estuaries and coastal seas in a rapidly changing world, 6-9 September 2015, London, The innershelf is a transitional, highly variable and productive area being also relevant for the physical, chemical, and biological processes and the transport of nutrients, plankton, and sediment offshore. This region contains well differentiated ecosystems spatially structured as cross-shore gradients. In low energy environments such as many Mediterranean coastal areas, phytoplankton biomass is frequently enhanced in nearshore waters, occasionally giving rise to intense blooms. Here, we characterize the fine scale variability of different nearshore coastal areas in the NW Mediterranean Sea during the stratified season. Data from 54 continuous high resolution cross-shore transects extending up to 3 km form the shoreline was used to investigate changes in biomass trends and its variability. Most of the sampled profiles displayed a differentiated nearshore environment consisting on changes on T, S and fluorescence as well as in their spatial scales of variation. These changes are accompanied by marked cross-shore differences in the composition of plankton communities (from micro to picoplankton). Variations in the nearshore gradients often respond to changes in the natural and anthropogenic forcings that regulate the ecosystem at each time and to the structure of the plankton assemblage. The heterogeneous nature of this nearshore ecosystem has profound repercussion on coastal ecosystem assessment and management
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- 2015
48. Parvilucifera sinerae is a generalist parasite but shows clear preferences among its dinoflagellates hosts
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Alacid, Elisabet, Park, Myung G., Turon, Marta, and Garcés, Esther
- Abstract
Aquatic Sciences Meeting, Aquatic Sciences: Global And Regional Perspectives - North Meets South, 22-27 February 2015, Granada, Spain, In marine food webs, microbial interactions involving eukaryotes and their parasites play an important role in controlling population dynamics. These interactions may alter the growth and mortality rates of a particular host and thus of its parasites, with consequences for the microbial community composition. Host-parasite interaction has been explored in Parvilucifera sinerae, which infects a wide range of dinoflagellates, including toxic-bloom-forming species. To define the biological parameters of one P. sinerae strain infecting Alexandrium minutum, A. catenella, Scrippsiella trochoidea, Protoceratium reticulatum, Heterocapsa niei and Gymnodinium catenatum, we examined (i) the influence of inoculum size on parasite prevalence,(ii) parasite generation time and (iii) parasite host preference in a mixed culture containing the above-mentioned species. In the artificial community, P. sinerae showed a clear preference to infect A. minutum and S. trochoidea, which is supported by the high prevalence of P. sinerae in these species, in comparison to those showed in G. catenatum and H. niei. Thus, although P. sinerae is considered to be a generalist parasite, our results are the first to show its preferential infection of certain dinoflagellate host species
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- 2015
49. Similarities between summer nearshore and inner-shelf plankton communities in the Mediterranean Sea
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Garcés, Esther, Jordi, Antoni, Alacid, Elisabet, Reñé, Albert, Sampedro, Nagore, Flo Arcas, Eva, Ferrera, Isabel, Camp, Jordi, Álvarez-Ellacuria, Itziar, Font, Jordi, and Basterretxea, Gotzon
- Subjects
Similarity analysis ,Nearshore ,Coastal gradients ,Plankton assemblages - Abstract
55 Conference Estuarine Coastal Sciences Association (ECSA 55), Unbounded boundaries and shifting baselines: Estuaries and coastal seas in a rapidly changing world, 6-9 September 2015, London, In what degree nearshore plankton communities constitute an independent and distinct assemblage from shelf assemblages is a challenging question. Obvious physical and chemical differences exist among both systems but, also, important exchange and interdependencies are depicted by physical forcing. Clues to answer this question can be inferred by analyzing the degree of similarity between both systems and their respective biological communities. We analyze similarities between samples collected in nearshore and shelf waters in Palma Bay during a sampling period extending from April to September 2014. Strong differences between plankton structure at both sites are interpreted on the basis of physical and chemical variations at each site and on the degree of exchange induced by coastal currents and thermocline erosion
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- 2015
50. The parasitoid Parvilucifera sinerae that kills toxic marine dinoflagellates: An overview from cell to field population
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Alacid, Elisabet, Reñé, Albert, and Garcés, Esther
- Subjects
fungi - Abstract
The 16th International Conference on Harmful Algae (ICHA 2014 New Zealand), Advancement Through Shared Science, 27-31 October 2014, Wellington, New Zealand.-- 1 page, Parvilucifera sinerae is a parasitoid that infects dinoflagellates, including harmful algal bloom (HAB) species. Here we describe the P. sinerae life cycle, in which a free-living zoospore penetrates a host cell and then develops a trophocyte while destroying the host cytoplasm. The trophocyte undergoes schizogony to form hundreds of new zoospores inside a sporangium. This sporangium remains dormant until, in response to an activation signal, the zoospores are released into the marine environment, where they are able to infect a new host. We identified dimethylsulfide (DMS) as the chemical signal involved in zoospore activation. Since many marine microalgal species are DMS producers, P. sinerae may be activated by many species. This fact is consistent with the results obtained in a previous study, where we found that P. sinerae is a generalist parasitoid, based on its broad host range among dinoflagellate species. Laboratory experiments demonstrated a prevalence of P. sinerae over 80% of the dinoflagellate population, causing the complete extermination of the host population after two parasitoid generations. The exploitation of dinoflagellate parasites in HAB mitigation has been proposed by several authors. However, as in many parasitic systems, the dynamics of P. sinerae infection are host-density-dependent, such that laboratory experiments poorly reproduce host-parasite interactions in nature, and field studies are lacking. In this work, we also present preliminary results of the prevalence of P. sinerae during a winter bloom of A. minutum in Arenys de Mar harbor (NW Mediterranean Sea) and discuss the parasite's potential contribution to bloom termination
- Published
- 2014
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