426 results on '"Al-Jardani A."'
Search Results
2. Evaluation of four rapid antigen tests for detection of SARS-CoV-2 virus
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Al-Alawi, Sulaiman, Al-Hinai, Hala, Al-Kindi, Nawal, Al-Rashidi, Mohammed, Al-Kindi, Hanan, Al-Shukri, Intisar, Al-Rashdi, Azza, Jose, Sachin, and Al-Jardani, Amina
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- 2021
3. The Rising Threat of Mucormycosis: Oman’s Experience Before and During the COVID-19 Pandemic
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Amina Al-Jardani, Adil Al-Wahaibi, Azza Al Rashdi, Bram Spruijtenburg, Noora AlBulushi, R. Sandhya Rani, Hanan AlKindi, Fatma Al-Yaquobi, Bader Al-Rawahi, Asma AlBalushi, Saleh Al Azri, Jacques F. Meis, Iman AlBuloshi, Seif Al-Abri, Ahmed Al-Harrasi, Abdullah M. S. Al-Hatmi, and Amal Al Maani
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mucormycosis ,epidemiology ,COVID-19 ,Oman ,Biology (General) ,QH301-705.5 - Abstract
Mucormycosis is a rare, severe fungal infection mainly affecting immunocompromised individuals. Because of limited data on its epidemiology in Oman, we present this national, multicentric, retrospective review that includes all cases of proven mucormycosis between 2006 and 2022 in Oman. There were 51 cases of mucormycosis reported in Oman. The annual incidence of mucormycosis was 0.38–0.69 cases per million population before COVID-19. During the pandemic, the incidence rose significantly to 1.76 in 2020, 5.31 in 2021, then decreased to 0.87 per million population in 2022. Diabetes was observed in 82.4% (n = 42) of the cases, COVID-19 in 47.1% (n = 24), and other chronic diseases in 72.6%. The use of steroids was reported in 33.3% (n = 17) and many patients (64.7%, n = 33) had multiple risk factors. The overall mortality rate was 41.2% (n = 21) and most deaths occurred within a month of diagnosis. Mortality rate among patients diagnosed with COVID-19 was 58.3% (14/24). Survival analysis showed a statistically significant association between COVID-19 status and patient survival (p = 0.024). Annual incidence of mucormycosis in Oman rose during the pandemic. This study highlights the epidemiological features of mucormycosis and emphasizes the importance of its inclusion in the national notifiable communicable diseases priority list as well as the importance of enhancing diagnostic capacities to detect and improve patient outcomes.
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- 2024
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4. Recurrent infective endocarditis in an adolescent due to 'Streptococcus agalactiae'
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Al Busaidi, Noora, Al-Maani, Amal, Al-Farqani, Abdullah, Altahir, Nuha, and Al Jardani, Amina
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- 2023
5. Childhood Hypertension: A Retrospective Analysis of Causes, Treatments, and Complications
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Mohamed S. Al Riyami, Aisha Al Shuaibi, Suad Al Jardani, Asma Elfar, Anisa Al Maskari, Badria Al Gaithi, Sulaiman Al Saidi, and Naifain Al Kalbani
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childhood hypertension ,Omani children ,primary hypertension ,secondary hypertension ,Pediatrics ,RJ1-570 - Abstract
Background: Hypertension is prevalent in the pediatric population, with estimated rates between 2% and 5%, and its incidence is rising globally. This study offers a single-center analysis of hypertension in children. Methods: a retrospective chart review was conducted involving children aged 1 month to 13 years diagnosed with hypertension. Results: The study included a total of 129 children. Secondary hypertension was identified in 103 patients (79.8%), while primary hypertension was noted in 26 patients (20.2%). Primary hypertension was more common among pre-teen children (50.0%), whereas secondary hypertension predominantly affected those aged 1 to 5 years. Renal parenchymal disease emerged as the most frequent etiology of secondary hypertension, followed by endocrine disorders and vascular issues. No significant correlation was found between hypertension and obesity. The primary complications associated with hypertension in these children were cardiovascular, followed by neurological issues. A small proportion (14.7%) managed their hypertension solely through lifestyle modifications, while the majority required additional antihypertensive medications. At the final follow-up, 50% of the children demonstrated improved blood pressure readings. Conclusion: The findings indicate a higher prevalence of secondary hypertension compared to primary hypertension among the studied population. This study underscores the necessity for heightened awareness among pediatricians regarding the early identification and management of hypertension. Larger population-based studies are warranted to further investigate the prevalence, causes, and outcomes of hypertension in this region.
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- 2024
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6. Screening for latent tuberculosis in migrants—status quo and future challenges
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Petersen, Eskild, Al-Abri, Seif, Al-Jardani, Amina, Memish, Ziad A., Aklillu, Eleni, Ntoumi, Francine, Mwaba, Peter, Wejse, Christian, Zumla, Alimuddin, and Al-Yaquobi, Fatma
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- 2024
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7. The Seroprevalence of Hepatitis C Virus (HCV) in Hemodialysis Patients in Oman: A National Cross-Sectional Study
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Intisar Al Shukri, Adil Al Wahaibi, Hanan Al kindi, Yaqoub Al-Maimani, Amal Al Maani, Abdullah Alqayoudhi, Mersum C. Methew, Jini Pradeesh, Raiya Al Abrawi, Abdo Debs, Nabila Mansoor, Ahmed AlRahbi, Wadha Al Balushi, Mahmood Alharrasi, Badriya Al Mamari, Magda Fakhry Soliman, Afraa Alsenaidi, Mohammed Al Alawi, Omaima Al Ismaili, Seif Al-Abri, and Amina Al-Jardani
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Hepatitis C virus ,Seroprevalence ,Dialysis unit ,Oman ,Cross-sectional ,Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background HCV infection in hemodialysis units is a significant cause of morbidity and mortality. The risk of HCV infection among dialysis patients is higher compared to the general population due to high potential blood exposures in hemodialysis settings. This study aims to assess the national HCV seroprevalence in selected dialysis units and to determine the risk factors for acquiring HCV infection. Methods This cross-sectional study was conducted from 1 January to 31 March 2021. A total of 734 patients from 11 hemodialysis centers in Oman were included. Samples were tested simultaneously for HCV antibodies and HCV RNA. HCV genotyping was determined in all viremic patients. Demographic and hemodialysis center related data were gathered and their association with the positive HCV serology were explored using univariate and multivariate logistic regression analysis. Results Out of 800 patients selected from 11 dialysis units for the study, 734 patients (91.8%) were included. The overall seroprevalence of HCV infection among hemodialysis patients was 5.6%. (41/734). HCV RNA was detected in 31.7% (13/41) of seropositive hemodialysis patients. The most common genotype was subtype 1a, followed by subtype 3. Variables associated with high HCV prevalence were family history of HCV and duration of dialysis. Conclusion The prevalence of infection within hemodialysis patients in Oman has significantly decreased but remained higher than the general population. Continuous monitoring and follow-up, including periodic serosurvey and linkage to care and treatment are recommended. Additionally, practice audits are recommended for identifying gaps and ensuring sustainability of best practices and further improvement.
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- 2023
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8. Screening for latent tuberculosis in migrants—status quo and future challenges
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Eskild Petersen, Seif Al-Abri, Amina Al-Jardani, Ziad A. Memish, Eleni Aklillu, Francine Ntoumi, Peter Mwaba, Christian Wejse, Alimuddin Zumla, and Fatma Al-Yaquobi
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Tuberculosis ,Latent TB ,Migrants ,Prevention ,Screening ,Treatment ,Infectious and parasitic diseases ,RC109-216 - Abstract
Objectives: To review the evidence that migrants from tuberculosis (TB) high-incidence countries migrating to TB low-incidence countries significantly contribute to active TB cases in the counties of destination, primarily through reactivation of latent TB. Methods: This is a narrative review. The different screening programs in the countries of destination are reviewed either based on screening and preventive treatment of latent TB pre or more commonly – post arrival. Results: Screening can be performed using interferon-gamma release assays (IGRA) or tuberculin skin tests (TST). Preventive treatment of latent TB is using either monotherapy with isoniazid, or in combination with rifampicin or rifapentine. We discuss the ethical issues of preventive treatment in asymptomatic individuals and how these are addressed in different screening programs. Conclusion: Screening migrants from TB high endemic countries to TB low endemic countries is beneficial. There is a lack of standardization and agreement on screening protocols, follow up and treatment.
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- 2024
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9. Genomic and geospatial epidemiology of Mycobacterium tuberculosis in Oman: first national insight using whole genome sequencing
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Al-Jardani, Amina, Al Yaquobi, Fatma, Adikaram, Chamila, Al Wahaibi, Adil, Al-Balushi, Laila, Al-Zadjali, Samiya, Al Abri, Bader, Al-Thuhli, Khalsa, and Al-Abri, Seif
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- 2023
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10. Mycobacterium tuberculosis epidemiology in Oman: whole-genome sequencing uncovers transmission pathways
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Hamza A Babiker, Amina Al-Jardani, Saleh Al-Azri, Robert A. Petit, Eltaib Saad, Sarah Al-Mahrouqi, Reham A.H. Mohamed, Salama Al-Hamidhi, Abdullah A. Balkhair, Najma Al Kharusi, Laila Al Balushi, Samiya Al Zadjali, Lucía Pérez-Pardal, Albano Beja-Pereira, and Ahmed Babiker
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Mycobacterium tuberculosis ,molecular phylogeography ,phylogeny ,Oman ,Microbiology ,QR1-502 - Abstract
ABSTRACT Tuberculosis (TB) originating from expatriates that hail from high TB-burden countries is hypothesized to play a role in continued TB transmission in Oman. Here, we used whole-genome sequencing (WGS) to assess national TB transmission dynamics. The annual incidence per 100,000 population per year was calculated for nationals and expatriates. A convenience sample of Mycobacterium tuberculosis (MTB) isolates from 2018 to 2019 was sequenced and analyzed with publicly available TB sequences from Bangladesh, Tanzania, the Philippines, India, and Pakistan. Relatedness was assessed by generating core-genome single nucleotide polymorphism (SNP) distances. The incidence of TB was five cases per 100,000 persons in 2018 and seven cases per 100,000 persons in 2020 (R2 = 0.34, P = 0.60). Incidence among nationals was 3.9 per 100,000 persons in 2018 and 3.5 per 100,000 persons in 2020 (R2 = 0.20, P = 0.70), and incidence among expatriates was 7.2 per 100,000 persons in 2018 and 12.7 per 100,000 persons in 2020 (R2 = 0.74, P = 0.34). Sixty-eight local MTB isolates were sequenced and analyzed with 393 global isolates. Isolates belonged to nine distinct spoligotypes. Two isolates, originating from an expatriate and an Omani national, were grouped into a WGS-based cluster (SNP distance < 12), which was corroborated by an epidemiological investigation. Relatedness of local and global isolates (SNP distance < 100) was also seen. The relatedness between MTB strains in Oman and those in expatriate countries of origin can aid inform TB control policy. Our results provide evidence that WGS can complement epidemiological analysis to achieve the End TB strategy goal in Oman. IMPORTANCE Tuberculosis (TB) incidence in Oman remains above national program control targets. TB transmission originating from expatriates from high TB-burden countries has been hypothesized to play a role. We used whole-genome sequencing (WGS) to assess TB transmission dynamics between expatriates and Omani nationals to inform TB control efforts. Available Mycobacterium tuberculosis isolates from 2018 to 2019 underwent WGS and analysis with publicly available TB sequences from Bangladesh, the Philippines, India, and Pakistan to assess for genetic relatedness. Our analysis revealed evidence of previously unrecognized transmission between an expatriate and an Omani national, which was corroborated by epidemiological investigation. Analysis of local and global isolates revealed evidence of distant relatedness between local and global isolates. Our results provide evidence that WGS can complement classic public health surveillance to inform targeted interventions to achieve the End TB strategy goal in Oman.
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- 2023
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11. Recurrent Infective Endocarditis in an Adolescent due to Streptococcus agalactiae: A Rare Presentation of a Common Pathogen
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Noora Al Busaidi, Amal Al-Maani, Abdullah Al Farqani, Nuha Altahir, and Amina Al Jardani
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endocarditis ,streptococcus agalactiae ,child ,oman ,heart failure ,blood culture ,Medicine - Abstract
Streptococcus agalactiae is known to cause invasive infections in risk groups such as pregnant women, newborns, and immunosuppressed patients but it is uncommon in older children. We describe a case of recurrent infective endocarditis due to S. agalactiae in an 11-year-old boy with Loeys-Dietz syndrome who was successfully treated with long-term antimicrobial therapy for one year.
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- 2023
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12. Prevalence of Hepatitis B Infection Among Pregnant Women in Oman
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Al-Ismaili, Omaima Mohamed, Al-Jardani, Amina, Al-Hinai, Fatma, Al-Shukri, Intisar, Mathew, Mersum, Al-Abri, Seif, and Al-Kindi, Hanan
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- 2022
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13. Genomic analysis of the emerging carbapenem-resistant Klebsiella pneumoniae sequence type 11 harbouring Klebsiella pneumoniae carbapenemase (KPC) in Oman
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Mohammed Al Balushi, Rajesh Kumar, Azza Al-Rashdi, Amin Ratna, Ahood Al-Jabri, Neima Al-shekaili, Ramasandhya Rani, Sara Al Sumri, Laila Al-Ghabshi, Seif Al-Abri, and Amina Al-Jardani
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Enterobacterales ,Klebsiella pneumoniae ,Whole genome sequencing ,Antimicrobial resistance ,Oman ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background and objective: The presence of carbapenemase enzymes among Enterobacterales is the main mechanism to reduce susceptibility to a wide range of antibiotics. Carbapenemase enzymes such as the Klebsiella pneumoniae carbapenemase (KPC) hydrolyse beta-lactam antibiotics group, which includes carbapenem, leads to fewer treatment options. We aim to describe the first report of carbapenem-resistant K. pneumoniae (CRKP) sequence type (ST) 11 harbouring KPC in Oman. Material and methods: Five confirmed CRKP isolates were isolated from clinical samples during the period of January 2019 till December 2019. Strains were genotyped by pulse field gel electrophoresis (PFGE) for genetic relatedness. Whole genome sequencing (WGS) was performed to observe relationships with global strains using multilocus sequence typing (MLST). Antimicrobial genes, capsular loci-K-types, plasmids types and virulence genes were also identified using whole genome sequence data. Results: All five CRKP were determined to have blaKPC-2 with or without blaOX-A48 and blaNDM-2. The molecular genotyping by PFGE showed 100% similarity among the five isolates. The MLST allelic profile analysis clonally clustered our strains with SL-258, CG-11 and ST11 mainly reported from South Asia. Further molecular characterization of the capsular K-locus and O-locus genes, revealed the strains to belong to KL-47 type and OL101 type respectively. The core genome typing suggests that our strains were clonally related to Chinese strains with less than five chromosomal nucleotides differences. Conclusion: Epidemiological and molecular analyses confirmed that these KPC-producing K. pneumoniae strains are from a single clone that caused multiple nosocomial infections in one health institution. This finding highlights the importance to sustain the surveillance and infection prevention efforts and to step up active screening to prevent the spread of nosocomial infection.
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- 2022
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14. COVID-19-Associated Mucormycosis: An Opportunistic Fungal Infection. A Case Series and Review
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Asma Al Balushi, Ahmed Al Ajmi, Qais Al Sinani, Varna Menon, Zainab Al Berieki, Asma Al Shezawi, Saleh Al Azri, Azza Al Rashdi, Amina Al Jardani, Thuwaiba Al Baluki, Salem Al Ghaithi, Ali Al Reesi, Ahmed Talib Al-Za'abi, Mohammed Abdullah Al’ Balushi, and Talib Al Maqbali
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Mucorales ,Rhizopus oryzae ,COVID-19 associated mucormycosis ,Rhino-orbital-cerebral mucormycosis ,Invasive mold infections ,COVID-19 variants ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background: A surge in COVID-19-associated mucormycosis cases has been observed during the second wave of COVID-19 in summer of 2021. Most cases were reported from India. The Delta variant (B.1.617.2) was the most common variant circulating at that time. Mucormycosis is an opportunistic angioinvasive fungal infection with high morbidity and mortality. Methods: We present 10 cases of COVID-19-associated rhino-orbital and rhino-orbital-cerebral mucormycosis managed in a secondary hospital in Oman. Results: The median time for developing mucormycosis was two weeks after COVID-19 diagnosis. All patients were newly diagnosed or already known to have poorly controlled diabetes mellitus. Five patients received corticosteroid therapy for COVID-19. Three patients had severe COVID-19 and died of severe acute respiratory distress syndrome and septic shock. Another three patients died of advanced mucormycosis and cerebral involvement. Despite aggressive medical and surgical intervention, the mortality rate was 60% (6/10). Conclusion: Mucormycosis is an aggressive opportunistic infection with high morbidity and mortality that requires prompt recognition and urgent intervention.Uncontrolled blood sugar, the use of corticosteroids, and immune dysfunction due to COVID-19 are all important risk factors for development of mucormycosis. Worse outcomes are associated with poor glycemic control despite aggressive medical and surgical interventions.
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- 2022
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15. Factors influencing the electronic government adoption among PSM in Oman: A structural equation modeling approach
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Musab A. Ali, Saud Ali Habib Al Jardani, Mohammed Najah Mahdi, and Ali Abd Almisreb
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Architecture ,NA1-9428 ,Structural engineering (General) ,TA630-695 - Abstract
The dynamic movement of electronic government (e-government) needs a clear pathway on the adoption level of stakeholders within the public sector organization. This research has identified gaps in the movement of the adoption. The respondents comprised 237 public sector managers at the ministry level who conduct e-government services in the Sultanate of Oman. A questionnaire was designed to tap into the manager's perception of the Internet's Perceived Usefulness, Perceived Credibility of technology, Intention to use the technology, and adoption of the Internet itself. Seven hypothesized relationships were tested in the structural model. An advanced quantitative data analysis using multivariate data analysis was employed. The data were analyzed using structural equation modeling (SEM) to test the causal and mediating effects of latent variables. Based on the research, the hypothesized model fit fails to be supported (p
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- 2023
16. Genomic and geospatial epidemiology of Mycobacterium tuberculosis in Oman: first national insight using whole genome sequencing
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Amina Al-Jardani, Fatma Al Yaquobi, Chamila Adikaram, Adil Al Wahaibi, Laila Al-Balushi, Samiya Al-Zadjali, Bader Al Abri, Khalsa Al-Thuhli, and Seif Al-Abri
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Tuberculosis ,Mycobacterium tuberculosis ,Whole genome sequencing ,Molecular epidemiology ,Oman ,Infectious and parasitic diseases ,RC109-216 - Abstract
ABSTRACT: Objectives: Mycobacterium tuberculosis (MTB) is a global public health issue. Although Oman reduced the burden of tuberculosis (TB) by 85% in under 25 years, the annual incidence rate remains stagnant. Whole genome sequencing (WGS) is used to investigate the transmission dynamics of MTB complex. This study aimed to resolve traditional genotype clusters and exploring the geospatial distribution to understand the epidemiology of TB in Oman. Methods: Confirmed cases with spoligotyping clusters were randomly selected. WGS of 70 isolates were selected for final analysis. Correlation of epidemiological and geospatial data was conducted. Results: A total of 233 cases were registered in 2021; 169 had confirmed growth, with an incidence rate of 5.2/100,000 population for 2021. A total of 70 genomes were analyzed, and five large clusters and three medium clusters were identified. The lineages L1, L2, L3, and L4 and several sublineages belonging to the Indo-Oceanic family and East African Indian family were identified as predominant in Oman. There were no multidrug-resistant cases identified. Conclusion: There is a considerable genetic variation among the strains in Oman. This predominance could be linked with the high percentage of non-national population, which represents different countries and frequent traveling to high TB burden countries. WGS combined with geospatial investigations of MTB are required to better understand the disease transmission in Oman, which will support TB elimination efforts.
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- 2023
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17. Genomic analysis of the emerging carbapenem-resistant Klebsiella pneumoniae sequence type 11 harbouring Klebsiella pneumoniae carbapenemase (KPC) in Oman
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Balushi, Mohammed Al, Kumar, Rajesh, Al-Rashdi, Azza, Ratna, Amin, Al-Jabri, Ahood, Al-shekaili, Neima, Rani, Ramasandhya, Sumri, Sara Al, Al-Ghabshi, Laila, Al-Abri, Seif, and Al-Jardani, Amina
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- 2022
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18. The Rising Threat of Mucormycosis: Oman's Experience Before and During the COVID-19 Pandemic.
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Al-Jardani, Amina, Al-Wahaibi, Adil, Al Rashdi, Azza, Spruijtenburg, Bram, AlBulushi, Noora, Rani, R. Sandhya, AlKindi, Hanan, Al-Yaquobi, Fatma, Al-Rawahi, Bader, AlBalushi, Asma, Al Azri, Saleh, Meis, Jacques F., AlBuloshi, Iman, Al-Abri, Seif, Al-Harrasi, Ahmed, Al-Hatmi, Abdullah M. S., and Al Maani, Amal
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COVID-19 pandemic , *COVID-19 , *COMMUNICABLE diseases , *MYCOSES , *OVERALL survival , *MUCORMYCOSIS - Abstract
Mucormycosis is a rare, severe fungal infection mainly affecting immunocompromised individuals. Because of limited data on its epidemiology in Oman, we present this national, multicentric, retrospective review that includes all cases of proven mucormycosis between 2006 and 2022 in Oman. There were 51 cases of mucormycosis reported in Oman. The annual incidence of mucormycosis was 0.38–0.69 cases per million population before COVID-19. During the pandemic, the incidence rose significantly to 1.76 in 2020, 5.31 in 2021, then decreased to 0.87 per million population in 2022. Diabetes was observed in 82.4% (n = 42) of the cases, COVID-19 in 47.1% (n = 24), and other chronic diseases in 72.6%. The use of steroids was reported in 33.3% (n = 17) and many patients (64.7%, n = 33) had multiple risk factors. The overall mortality rate was 41.2% (n = 21) and most deaths occurred within a month of diagnosis. Mortality rate among patients diagnosed with COVID-19 was 58.3% (14/24). Survival analysis showed a statistically significant association between COVID-19 status and patient survival (p = 0.024). Annual incidence of mucormycosis in Oman rose during the pandemic. This study highlights the epidemiological features of mucormycosis and emphasizes the importance of its inclusion in the national notifiable communicable diseases priority list as well as the importance of enhancing diagnostic capacities to detect and improve patient outcomes. [ABSTRACT FROM AUTHOR]
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- 2024
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19. First clinical case of VIM-1-producing Leclercia adecarboxylata: A case report and literature review
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Mohammed Abdullah Al Shuhoumi, Abdulrahman Al Mhrooqi, Azza Al Rashdi, Rajesh Kumar, Ahood Al Jabri, Amal Al Kalbani, and Amina Al Jardani
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Leclercia adecarboxylata ,VIM-1 and OXA-48 ,Acute intracerebral haemorrhage ,Misidentification ,Diseases of the digestive system. Gastroenterology ,RC799-869 ,Microbiology ,QR1-502 - Abstract
Leclercia adecarboxylata is a recently acknowledged emerging pathogen. It is a member of the Enterobacterals family, formerly thought to be a member of the genus Escherichia. Isolation was reported from various animal and environmental specimens. However, it rarely causes infection in humans, and the true frequency is unknown or underestimated. Leclercia adecarboxylata showed an ascending resistance grade from pan-sensitive to Carbapenem-resistant due to its ability to produce and harbour hydrolysing enzymes that challenge daily clinical practices. In our report, the isolate was misidentified as Citrobacter koseri by Analytical Profile Index for Enterobacterals (API E), and as Pantoea species by Vitek 2 but confirmed by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry (MALDI-TOF MS) and 16S ribosomal RNA analysis as Leclercia adecarboxylata. Conventional PCR revealed the presence of two populations of resistance genes, VIM-1 and OXA-48. Herein, a report of the first clinical emergence of Leclercia adecarboxylata producing VIM-1 in a rectal swab of a 63-year-old non-immunocompromised female with acute intracerebral haemorrhage.
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- 2023
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20. The role of children and adolescents in the transmission of SARS-CoV-2 virus within family clusters: A large population study from Oman
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Abdullah Alqayoudhi, Abdullah Al Manji, Sulien Al khalili, Amal Al Maani, Hanan Alkindi, Fatma Alyaquobi, Bader Al Rawahi, Amina Al-Jardani, Adil Al Wahaibi, and Seif Al-Abri
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COVID-19 ,Infection ,Children ,National study clinical features ,Outcome ,Outbreaks ,Infectious and parasitic diseases ,RC109-216 ,Public aspects of medicine ,RA1-1270 - Abstract
Background: In Oman, many extended families tend to live in one household. Some families can include 20–30 individuals with the majority of them being children. This study investigates the role of children in spreading SARS-CoV-2 causing COVID-19 within family clusters in Oman. Methods: This retrospective study includes data of 1026 SARS-CoV-2 positive children (≤18 years) collected from the national surveillance database for COVID-19 between 1 February 2020 and 30 May 2020. Results: We included 1026 patients. Most, 842 were Omani (82%), 52% male, and 28.5% asymptomatic. Close to the half of symptomatic 419 (40%), patients presented with fever associated with other respiratory symptoms. Fifty pediatric patients were index cases who transmitted the virus to 107 patients in total (86 adults and 21 children) with a mode of 1. There is no statistical significance of all studied risk factors in the transmission of the SARS-CoV-2 virus including age, gender, and cycle threshold (CT) value. Conclusions: According to this study, children are not to be considered a significant driver of transmission of SARS-CoV-2 in Oman.
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- 2021
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21. Seroprevalence of SARS-CoV-2 antibodies in the general population of Oman: results from four successive nationwide sero-epidemiological surveys
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Seif Salem Al-Abri, Adil Al-Wahaibi, Hanan Al-Kindi, Padmamohan J Kurup, Ali Al-Maqbali, Zayid Al-Mayahi, Mohammed Hamed Al-Tobi, Salim Habbash Al-Katheri, Sultan Albusaidi, Mahmood Humaid Al-Sukaiti, Ahmed Yar Mohammed Al Balushi, Iyad Omer Abdelgadir, Nawal Al-Shehi, Essam Morkos, Amal Al-Maani, Bader Al-Rawahi, Fatma Alyaquobi, Abdullah Alqayoudhi, Khalid Al-Harthy, Sulien Al-Khalili, Azza Al-Rashdi, Intisar Al-Shukri, Thamra S. Al Ghafri, Fatma Al-Hashmi, Saeed Mussalam Al Jassasi, Nasser Alshaqsi, Nilanjan Mitra, Humaid Suhail Al Aamry, Parag Shah, Hanan Hassan Al Marbouai, Amany Hamed Al Araimi, Ismail Mohammed Kair, Asim Mohammed Al Manji, Ahmed Said Almallak, Fatma Khamis Al Alawi, Vidyanand Vaidya, Muhammad Muqeetullah, Hanan Alrashdi, Saud Said Nassir Al Jamoudi, Asila Alshaqsi, Abdullah Al Sharji, Hamida Al Shukeiri, Badr Al-Abri, Sulaiman Al-Rawahi, Said H. Al-Lamki, Abdulla Al-Manji, and Amina Al-Jardani
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Oman ,SARS-CoV-2 ,COVID-19 ,Antibody seroprevalence ,Herd immunity ,Prevalence ,Infectious and parasitic diseases ,RC109-216 - Abstract
ABSTRACT: Objective: To assess the seroprevalence of severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) in Oman and longitudinal changes in antibody levels over time within the first 11 months of the coronavirus disease 2019 (COVID-19) pandemic. Methods: This nationwide cross-sectional study was conducted as a four-cycle serosurvey using a multi-stage stratified sampling method from July to November 2020. A questionnaire was used and included demographics, history of acute respiratory infection and list of symptoms, COVID-19 contact, previous diagnosis or admission, travel history and risk factors. Results: In total, 17,457 participants were surveyed. Thirty percent were female and 66.3% were Omani. There was a significant increase in seroprevalence throughout the study cycles, from 5.5% (4.8–6.2%) in Cycle 1 to 22% (19.6–24.6%) in Cycle 4. There was no difference in seroprevalence between genders, but significant differences were found between age groups. There was a transition of seroprevalence from being higher in non-Omanis than Omanis in Cycle 1 [9.1% (7.6–10.9%) vs 3.2% (2.6–3.9%)] to being higher in Omanis than non-Omanis in Cycle 4 [24.3% (21.0–27.9%) vs 16.8% (14.9–18.9%)]. There was remarkable variation in the seroprevalence of SARS-CoV-2 according to governorate. Close contacts of people with COVID-19 had a 96% higher risk of having the disease [adjusted odds ratio (AOR) 1.96, 95% confidence intervals (CI) 1.64–2.34]. Labourers had 58% higher risk of infection compared with office workers (AOR 1.58, 95% CI 1.04–2.35). Conclusion: This study showed a wide variation in the spread of SARS-CoV-2 across governorates in Oman, with higher estimated seroprevalence in migrants in the first two cycles. Prevalence estimates remain low and are insufficient to provide herd immunity.
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- 2021
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22. Genomic analysis of the first cases of extensively drug-resistant, travel-related Salmonella enterica serovar Typhi in Oman
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Al-Rashdi, Azza, Kumar, Rajesh, Al-Bulushi, Mohamed, Abri, Seif Al, and Al-Jardani, Amina
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- 2021
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23. The role of children and adolescents in the transmission of SARS-CoV-2 virus within family clusters: A large population study from Oman
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Alqayoudhi, Abdullah, Al Manji, Abdullah, Al khalili, Sulien, Al Maani, Amal, Alkindi, Hanan, Alyaquobi, Fatma, Al Rawahi, Bader, Al-Jardani, Amina, Al Wahaibi, Adil, and Al-Abri, Seif
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- 2021
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24. Seroprevalence of SARS-CoV-2 antibodies in the general population of Oman: results from four successive nationwide sero-epidemiological surveys
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Al-Abri, Seif Salem, Al-Wahaibi, Adil, Al-Kindi, Hanan, Kurup, Padmamohan J, Al-Maqbali, Ali, Al-Mayahi, Zayid, Al-Tobi, Mohammed Hamed, Al-Katheri, Salim Habbash, Albusaidi, Sultan, Al-Sukaiti, Mahmood Humaid, Al Balushi, Ahmed Yar Mohammed, Abdelgadir, Iyad Omer, Al-Shehi, Nawal, Morkos, Essam, Al-Maani, Amal, Al-Rawahi, Bader, Alyaquobi, Fatma, Alqayoudhi, Abdullah, Al-Harthy, Khalid, Al-Khalili, Sulien, Al-Rashdi, Azza, Al-Shukri, Intisar, Al Ghafri, Thamra S., Al-Hashmi, Fatma, Al Jassasi, Saeed Mussalam, Alshaqsi, Nasser, Mitra, Nilanjan, Al Aamry, Humaid Suhail, Shah, Parag, Al Marbouai, Hanan Hassan, Al Araimi, Amany Hamed, Kair, Ismail Mohammed, Al Manji, Asim Mohammed, Almallak, Ahmed Said, Al Alawi, Fatma Khamis, Vaidya, Vidyanand, Muqeetullah, Muhammad, Alrashdi, Hanan, Al Jamoudi, Saud Said Nassir, Alshaqsi, Asila, Al Sharji, Abdullah, Al Shukeiri, Hamida, Al-Abri, Badr, Al-Rawahi, Sulaiman, Al-Lamki, Said H., Al-Manji, Abdulla, and Al-Jardani, Amina
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- 2021
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25. The role of supporting services in driving SARS-CoV-2 transmission within healthcare settings: A multicenter seroprevalence study
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Al-Maani, Amal, Al Wahaibi, Adil, Al-Sooti, Jabir, Al Abri, Bader, Al Shukri, Intisar, AlRisi, Elham, Al Abri, Laila, AlDaghari, Khalid, Al Subhi, Mahmood, AlMaqbali, Salima, AlBurtamani, Salim, AlAbri, Asma, Al Salami, Ahmed, Al-Beloushi, Iman, Al-Zadjali, Najla, Alqayoudhi, Abdullah, Al-Kindi, Hanan, Al Shaqsi, Khalifa, Al-Jardani, Amina, and Al-Abri, Seif
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- 2021
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26. Effects of COVID-19 on mortality: A 5-year population-based study in Oman
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Al Wahaibi, Adil, Al-Maani, Amal, Alyaquobi, Fatma, Al Harthy, Khalid, Al-Jardani, Amina, Al Rawahi, Bader, and Al-Abri, Seif
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- 2021
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27. Molecular epidemiology of COVID-19 in Oman: A molecular and surveillance study for the early transmission of COVID-19 in the country
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Al-Mahruqi, Samira, Al-Wahaibi, Adil, Khan, Abdul Latif, Al-Jardani, Amina, Asaf, Sajjad, Alkindi, Hanan, Al-Kharusi, Samiha, Al-Rawahi, Ahmed N., Al-Rawahi, Ahmed, Al-Salmani, Majid, Al-Shukri, Intisar, Al-Busaidi, Aisha, Al-Abri, Seif Salem, and Al-Harrasi, Ahmed
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- 2021
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28. The role of supporting services in driving SARS-CoV-2 transmission within healthcare settings: A multicenter seroprevalence study
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Amal Al-Maani, Adil Al Wahaibi, Jabir Al-Sooti, Bader Al Abri, Intisar Al Shukri, Elham AlRisi, Laila Al Abri, Khalid AlDaghari, Mahmood Al Subhi, Salima AlMaqbali, Salim AlBurtamani, Asma AlAbri, Ahmed Al Salami, Iman Al-Beloushi, Najla Al-Zadjali, Abdullah Alqayoudhi, Hanan Al-Kindi, Khalifa Al Shaqsi, Amina Al-Jardani, and Seif Al-Abri
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SARS-CoV-2 ,COVID-19 ,Healthcare workers ,Community ,Serosurvey ,Infection ,Infectious and parasitic diseases ,RC109-216 - Abstract
Objective: To determine the seroprevalence of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) in healthcare workers (HCWs) based on risk of exposure to COVID-19 patients. Method: This was a SARS-CoV-2 seroprevalence cross-sectional study in risk-stratified HCWs randomly selected from three main district hospitals in Oman. Results: 1078 HCWs were included, with an overall SARS-CoV-2 seroprevalence of 21%. The seropositivity rates in low-, variable-, and high-risk groups were 29%, 18%, and 17%, respectively (p-value < 0.001). The study found higher positivity in males (crude odds ratio [COR] 1.71, 95% confidence interval [CI] 1.28–2.3), and workers residing in high-prevalence areas (COR 2.09, 95% CI 1.42–3.07). Compared with doctors, workers from supporting services, administration staff, and nurses were more likely to test positive for SARS-CoV-2 antibodies (COR 9.81, 95% CI 5.26–18.27; 2.37, 95% CI 1.23–4.58; 2.08 95% CI 1.14–3.81). The overall rate of previously undetected infection was 12%, with higher values in low-risk HCWs. High district prevalence was a driving factor for seropositivity in the low-risk group (adjusted odds ratio [AOR] 2.36, 95% CI 1.0–5.59). Conclusion: Low-risk supporting services workers can drive SARS-CoV-2 transmission in hospitals. More attention and innovation within this area will enhance the safety of health care during epidemics/pandemics.
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- 2021
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29. Community Foodborne of Salmonella Weltevreden Outbreak at Northern Governorate, Sultanate of Oman
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Al-Maqbali, Ali A., Al-Abri, Seif S., Vidyanand, V., Al-Abaidani, Idris, Al-Balushi, Amal S., Bawikar, Shyam, El Amir, Emadeldin, Al-Azri, Saleh, Kumar, Rajesh, Al-Rashdi, Azza, and Al-Jardani, Amina K.
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- 2021
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30. Childhood Hypertension: A Retrospective Analysis of Causes, Treatments, and Complications.
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Al Riyami, Mohamed S., Al Shuaibi, Aisha, Al Jardani, Suad, Elfar, Asma, Al Maskari, Anisa, Al Gaithi, Badria, Al Saidi, Sulaiman, and Al Kalbani, Naifain
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HYPERTENSION epidemiology ,CARDIOVASCULAR diseases ,BEHAVIOR modification ,T-test (Statistics) ,HYPERTENSION ,CONSANGUINITY ,HYPERTENSION in children ,RETROSPECTIVE studies ,ANTIHYPERTENSIVE agents ,CHILDREN'S hospitals ,DESCRIPTIVE statistics ,CHI-squared test ,ESSENTIAL hypertension ,AGE distribution ,NEUROLOGICAL disorders ,MEDICAL records ,ACQUISITION of data ,HEALTH behavior ,ENDOCRINE diseases ,BLOOD pressure ,DATA analysis software ,VASCULAR diseases ,DISEASE complications ,CHILDREN - Abstract
Background: Hypertension is prevalent in the pediatric population, with estimated rates between 2% and 5%, and its incidence is rising globally. This study offers a single-center analysis of hypertension in children. Methods: a retrospective chart review was conducted involving children aged 1 month to 13 years diagnosed with hypertension. Results: The study included a total of 129 children. Secondary hypertension was identified in 103 patients (79.8%), while primary hypertension was noted in 26 patients (20.2%). Primary hypertension was more common among pre-teen children (50.0%), whereas secondary hypertension predominantly affected those aged 1 to 5 years. Renal parenchymal disease emerged as the most frequent etiology of secondary hypertension, followed by endocrine disorders and vascular issues. No significant correlation was found between hypertension and obesity. The primary complications associated with hypertension in these children were cardiovascular, followed by neurological issues. A small proportion (14.7%) managed their hypertension solely through lifestyle modifications, while the majority required additional antihypertensive medications. At the final follow-up, 50% of the children demonstrated improved blood pressure readings. Conclusion: The findings indicate a higher prevalence of secondary hypertension compared to primary hypertension among the studied population. This study underscores the necessity for heightened awareness among pediatricians regarding the early identification and management of hypertension. Larger population-based studies are warranted to further investigate the prevalence, causes, and outcomes of hypertension in this region. [ABSTRACT FROM AUTHOR]
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- 2024
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31. Effects of COVID-19 on mortality: A 5-year population-based study in Oman
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Adil Al Wahaibi, Amal Al-Maani, Fatma Alyaquobi, Khalid Al Harthy, Amina Al-Jardani, Bader Al Rawahi, and Seif Al-Abri
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COVID-19 ,Pandemic ,Retrospective studies ,Non-communicable diseases ,Communicable diseases ,Oman ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background: Mortality surveillance provides a crucial method for monitoring disease activity. Coronavirus disease 2019 (COVID-19) can cause excess mortality both directly and indirectly by increasing deaths from other diseases. The aim of this study was to investigate the effects of COVID-19 on mortality in Oman. Methods: A cross-sectional retrospective analysis of mortality data from 1 January 2015 to 16 August 2020 was undertaken. Baseline mortality estimated using the Farrington flexible model and excess mortality were calculated for the pandemic period (16 March–16 August 2020) according to cause of death, place of death and age group. Results: During the pandemic period, there was a 15% [95% confidence interval (CI) 14–17] increase in all-cause mortality from baseline. When classifying by cause, there was a 9% (95% CI 5–12) increase in deaths due to respiratory diseases, a 2% (95% CI 1–4) increase in deaths due to infectious diseases and a 9% (95% CI 8–11) increase in unclassified deaths. In terms of place of death, 12% (95% CI 11–14) of excess mortality occurred in hospitals and 7% (95% CI 5–8) occurred in homes during the pandemic period. Patients aged >60 years recorded a 15% (95% CI 13–16) increase in all-cause mortality during this period. Conclusion: The COVID-19 pandemic has resulted in a 15% increase in all-cause mortality in Oman, mainly as a result of deaths from COVID-19. However, unclassified deaths, deaths due to respiratory diseases and deaths due to infectious diseases have also increased, enforcing the need for a holistic approach and appropriate coordination of health services during such health crises.
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- 2021
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32. Molecular epidemiology of COVID-19 in Oman: A molecular and surveillance study for the early transmission of COVID-19 in the country
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Samira Al-Mahruqi, Adil Al-Wahaibi, Abdul Latif Khan, Amina Al-Jardani, Sajjad Asaf, Hanan Alkindi, Samiha Al-Kharusi, Ahmed N. Al-Rawahi, Ahmed Al-Rawahi, Majid Al-Salmani, Intisar Al-Shukri, Aisha Al-Busaidi, Seif Salem Al-Abri, and Ahmed Al-Harrasi
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SARS-CoV-2 ,COVID-19 epidemiology ,Phylogenomic analysis ,Clade ,Mutation ,Oman ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background: Severe acute respiratory syndrome coronavirus-2 (SARS-CoV-2) has been proven to be lethal to human health, which affects almost every corner of the world. The objectives of this study were to add context to the global data and international genomic consortiums, and to give insight into the efficiency of the contact tracing system in Oman. Methods: We combined epidemiological data and whole-genome sequence data from 94 samples of SARS-CoV-2 in Oman to understand the origins, genetic variation, and transmissibility. The whole-genome size of sequence data was obtained through a customized SARS-COV-2 research panel. Amplifier methods ranged from 26 Kbp to 30 Kbp and were submitted to GISAID. Findings: The study found that P323L (94.7%) is the most common mutation, followed by D614G (92.6%) Spike protein mutation. A unique mutation, I280V, was first reported in Oman and was associated with a rare lineage, B.1.113 (10.6%). In addition, the study revealed a good agreement between genetic and epidemiological data. Interpretation: Oman’s robust surveillance system was very efficient in guiding the outbreak investigation processes in the country, the study illustrates the future importance of molecular epidemiology in leading the national response to outbreaks and pandemics.
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- 2021
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33. Chronic Q fever endocarditis in an Omani child: The first pediatric case report from Oman
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AlAraimi, Hanaa A, Al-Alawi, Khalid, Al-Jardani, Amina K, Paul, George, Al-Sukaiti, Nashat, Al-Farqani, Abdullah, and Al-Maani, Amal S
- Published
- 2020
34. Drug resistant Mycobacterium tuberculosis in Oman: resistance-conferring mutations and lineage diversity
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Sara Al Mahrouqi, Amal Gadalla, Saleh Al Azri, Salama Al-Hamidhi, Amina Al-Jardani, Abdullah Balkhair, Amira Al-fahdi, Laila Al Balushi, Samiya Al Zadjali, Asmahan Mohammed Nasser Al Marhoubi, and Hamza A. Babiker
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Mycobacterium tuberculosis ,Drug resistance genes ,Spoligotypes ,Oman ,Medicine ,Biology (General) ,QH301-705.5 - Abstract
Background The Sultanate of Oman is country a low TB-incidence, with less than seven cases per 105 population detected in 2020. Recent years have witnessed a persistence in TB cases, with sustained incidence rate among expatriates and limited reduction among Omanis. This pattern suggests transmission from the migrant population. The present study examined the genetic profile and drug resistance-conferring mutations in Mycobacterium tuberculosis collected from Omanis and expatriates to recognise possible causes of disease transmission. Methods We examined M. tuberculosis cultured positive samples, collected from Omanis (n = 1,344) and expatriates (n = 1,203) between 2009 and 2018. These isolates had a known in vitro susceptibility profile to first line anti-TB, Streptomycin (SM), Isoniazid (INH), Rifampicin (RIF), Ethambutol (EMB) and Pyrazinamide (PZA). The diversity of the isolates was assessed by spacer oligo-typing (spoligotyping). Drug resistance-conferring mutations resulted from full-length sequence of nine genes (katG, inhA, ahpc, rpoB, rpsL, rrs, embB, embC, pncA) and their phenotypic relationship were analysed. Results In total, 341/2192 (13.4%), M. tuberculosis strains showed resistance to any drug, comprising mono-resistance (MR) (242, 71%), poly-resistance (PR) (40, 11.7%) and multi-drug resistance (MDR) (59, 17.3%). The overall rate of resistance among Omanis and expatriates was similar; however, MDR and PZAR were significantly higher among Omanis, while INHR was greater among expatriates. Mutations rpsL K43R and rpoB S450L were linked to Streptomycin (SMR) and Rifampicin resistance (RIFR) respectively. Whereas, katG S315T and inhA –C15T/G–17T were associated with Isoniazid resistance (INHR). The resistance patterns (mono-resistant, poly-resistant and MDR) and drug resistance-conferring mutations were found in different spoligo-lineages. rpsL K43R, katG S315T and rpoB S450L mutations were significantly higher in Beijing strains. Conclusions Diverse drug resistant M. tuberculosis strains exist in Oman, with drug resistance-conferring mutations widespread in multiple spoligo-lineages, indicative of a large resistance reservoir. Beijing’s M. tuberculosis lineage was associated with MDR, and multiple drug resistance-conferring mutations, favouring the hypothesis of migration as a possible source of resistant lineages in Oman.
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- 2022
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35. COVID-19 epidemic monitoring after non-pharmaceutical interventions: The use of time-varying reproduction number in a country with a large migrant population
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Al Wahaibi, Adil, Al Manji, Abdullah, Al Maani, Amal, Al Rawahi, Bader, Al Harthy, Khalid, Alyaquobi, Fatma, Al-Jardani, Amina, Petersen, Eskild, and Al Abri, Seif
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- 2020
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36. Screening migrants from tuberculosis high-endemic countries for latent tuberculosis in Oman: A cross sectional cohort analysis
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Alyaquobi, Fatma, AlMaqbali, Ali A., Al-Jardani, Amina, Ndunda, Nduku, Al Rawahi, Bader, Alabri, Badr, AlSadi, Ahmed Mohammed, AlBaloshi, Jamal A., Al-Baloshi, Fatma S., Al-Essai, Naima A., Al-Azri, Saleh A., Al-Zadjali, Samiya M., Al-Balushi, Laila M., Petersen, Eskild, and Al-Abri, Seif
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- 2020
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37. Tools to implement the World Health Organization End TB Strategy: Addressing common challenges in high and low endemic countries
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Al Abri, Seif, Kasaeva, Thereza, Migliori, Giovanni Battista, Goletti, Delia, Zenner, Dominik, Denholm, Justin, Al Maani, Amal, Cirillo, Daniela Maria, Schön, Thomas, Lillebæk, Troels, Al-Jardani, Amina, Go, Un-Yeong, Dias, Hannah Monica, Tiberi, Simon, Al Yaquobi, Fatma, Khamis, Faryal Ali, Kurup, Padmamohan, Wilson, Michael, Memish, Ziad, Al Maqbali, Ali, Akhtar, Muhammad, Wejse, Christian, and Petersen, Eskild
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- 2020
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38. Eikenella Corrodens, Fusobacterium Nucleatum and Parvimonas Micra: A Case of Polymicrobial Brain Abscess
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Al Saleemi, Waad, primary, Al Balushi, Amal, additional, AlAzri, Ahmed, additional, Al Shaaibi, Mustafa, additional, Al-Jardani, Amina, additional, Al Rashdi, Azza, additional, Al Ramadhani, Khalsa, additional, Al Hinai, Hala, additional, and Al Kindi, Nawal, additional
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- 2024
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39. Hypervirulent Capsular Serotypes K1 and K2 Klebsiella pneumoniae Strains Demonstrate Resistance to Serum Bactericidal Activity and Galleria mellonella Lethality
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AL-Busaidi, Basaier, primary, AL-Muzahmi, Muna, additional, AL-Shabibi, Zahra, additional, Rizvi, Meher, additional, AL-Rashdi, Azza, additional, AL-Jardani, Amina, additional, Farzand, Robeena, additional, and AL-Jabri, Zaaima, additional
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- 2024
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40. West nile virus infection: One-Year postkidney transplant
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Ali Almajrafi, Issa Al Salmi, Faryal Khamis, Nenad Pandak, Amina Al-Jardani, and Eskild Petersen
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Medicine - Abstract
West Nile virus (WNV) infections are a mosquito-borne virus of the Flaviviridae family. The clinical feature of the virus varies between individuals from being asymptomatic in most of the cases to severe central nervous system disease manifested as meningitis, encephalitis, and paralysis. Diabetic nephropathy patient with microvascular and macrovascular complications, who received a kidney transplant a year ago on immunosuppressive therapy, presented with a three-day history of upper respiratory tract infection and fever. He lived in an endemic area of brucella infection. He underwent a thorough and full evaluation with various laboratory and radiological evaluations. The patient was started empirically on ceftriaxone and acyclovir for a presumptive diagnosis of herpes encephalitis and covering also Listeria with ampicillin. The patient did not improve with the initial management, so a T2-weighted magnetic resonance imaging of the brain executed that showed nonspecific hyper-intensity in the left frontal area suggestive of microangiopathic changes. WNV-neutralizing antibodies were positive with a high titer >1:640, whereas WNV RNA was not detected in the plasma sample. In the serum sample, WNV IgM and IgG were both positive. WNV IgM antibodies were detected with 6.55 and 5.97 antibody index and were done by a semiquantitative ELISA. Furthermore, WNV-neutralizing antibodies were positive as well as with a titer of 1:80. As there is no specific antiviral treatment available, the patient management was supportive; reduction in immunosuppressive agents and the use of IV IgG. This is the first reported case of one-year post renal transplant who developed WNV encephalitis and neuropathy with significant response to immunoglobulin after 18 days of infections.
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- 2021
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41. COVID-19 epidemic monitoring after non-pharmaceutical interventions: The use of time-varying reproduction number in a country with a large migrant population
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Adil Al Wahaibi, Abdullah Al Manji, Amal Al Maani, Bader Al Rawahi, Khalid Al Harthy, Fatma Alyaquobi, Amina Al-Jardani, Eskild Petersen, and Seif Al Abri
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COVID-19 epidemiology ,Reproductive number ,Public health intervention ,Infectious and parasitic diseases ,RC109-216 - Abstract
Background: COVID-19’s emergence carries with it many uncertainties and challenges, including strategies to manage the epidemic. Oman has implemented non-pharmaceutical interventions (NPIs) to mitigate the impact of COVID-19. However, responses to NPIs may be different across different populations within a country with a large number of migrants, such as Oman. This study investigated the different responses to NPIs, and assessed the use of the time-varying reproduction number (Rt) to monitor them. Methods: Polymerase chain reaction (PCR) laboratory-confirmed COVID-19 data for Oman, from February 24 to June 3, 2020, were used alongside demographic and epidemiological information. Data were arranged into pairs of infector–infectee, and two main libraries of R software were used to estimate reproductive number (Rt). Rt was calculated for both Omanis and non-Omanis. Findings: A total of 13,538 cases were included, 44.9% of which were Omanis. Among all these cases we identified 2769 infector–infectee pairs for calculating Rt. There was a sharp drop in Rt from 3.7 (95% confidence interval [CI] 2.8–4.6) in mid-March to 1.4 (95% CI 1.2–1.7) in late March in response to NPIs. Rt then decreased further to 1.2 (95% CI 1.1–1.3) in late April after which it rose, corresponding to the easing of NPIs. Comparing the two groups, the response to major public health controls was more evident in Omanis in reducing Rt to 1.09 (95% CI 0.84–1.3) by the end of March. Interpretation: Use of real-time estimation of Rt allowed us to follow the effects of NPIs. The migrant population responded differently than the Omani population.
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- 2020
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42. First report of human infection with avian influenza A(H9N2) virus in Oman: The need for a One Health approach
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Zayid K. Almayahi, Hanan Al Kindi, C. Todd Davies, Bader Al-Rawahi, Amina Al-Jardani, Fatma Al-Yaqoubi, Yunho Jang, Joyce Jones, John R. Barnes, William Davis, Shu Bo, Brian Lynch, David E. Wentworth, Zaina Al-Maskari, Amal Al Maani, and Seif Al-Abri
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Infectious and parasitic diseases ,RC109-216 - Abstract
Following the detection of the first human case of avian influenza A subtype H9N2 in 1998, more than 40 cases were diagnosed worldwide. However, the spread of the virus has been more remarkable and significant in global poultry populations, causing notable economic losses despite its low pathogenicity. Many surveillance studies and activities conducted in several countries have shown the predominance of this virus subtype. We present the case of a 14-month-old female in Oman with an A(H9N2) virus infection. This is the first human case of A(H9N2) reported from Oman and the Gulf Cooperation Countries, and Oman is the second country outside of southern and eastern Asia to report a case (cases have also been detected in Egypt). The patient had bronchial asthma and presented with a high-grade temperature and symptoms of lower respiratory tract infection that necessitated admission to a high dependency unit in a tertiary care hospital. It is of urgency that a multisector One Health approach be established to combat the threat of avian influenza at the animal–human interface. In addition to enhancements of surveillance and control in poultry, there is a need to develop screening and preventive programs for high-risk occupations. Keywords: Avian influenza A, One Health, A(H9N2), Virus infection, Oman
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- 2020
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43. A Need for a Framework for Curriculum Evaluation in Oman
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Al-Jardani, Khalid Salim, Siraj, Saedah, and Abedalaziz, Nabeel
- Abstract
The field of curriculum evaluation is a key part of the educational process. This means that this area needs to be developed continuously and requires ongoing research. This paper highlights curriculum evaluation in Oman, different evaluation procedures and methods and instruments used. The need for a framework for curriculum evaluation is a vital part of this research. This research ensures the need for developing the framework for curriculum evaluation by involving 7 curriculum officers. They stress the need for it in the Omani context.
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- 2012
44. ELT and Consciousness-Raising
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Al-Jardani, Khalid Salim Saif
- Abstract
The paper highlights the concept of consciousness-raising. It relates it to different aspects of ELT such as explicit teaching, language awareness, language acquisition and practice. How these terms are related to the concept of consciousness-raising within the English Language teaching. Its main aim is to help learners to notice for themselves how the language is used naturally is highlighted as well as that C-R is mainly seen as getting learners to notice the grammar features, by applying them in tasks. C-R can be considered as different degrees of explicit teaching of grammar, the first step of the language acquisition process and language awareness. The paper also shows two examples of using this and their implications into the classroom. These were conducted in a class of grade 7 aged between 12-13 years old, in an Omani school. The paper highlights how pupils feet about doing the activities which allow them to practice the language more. This stresses that pupils can work on more than one structure at a time. Therefore, it helps to save time and effort instead of presenting each item in a lesson. On other hand, it also attempts to raise the pupils' awareness of the target grammar which may lead to independent learning later on.
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- 2012
45. Control of the 2018–2019 dengue fever outbreak in Oman: A country previously without local transmission
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Al-Abri, Seif S., Kurup, Padmamohan J., Al Manji, Abdulla, Al Kindi, Hanan, Al Wahaibi, Adel, Al Jardani, Amina, Mahmoud, Osama Ahmed, Al Balushi, Lamia, Al Rawahi, Bader, Al Fahdi, Fatma, Al Siyabi, Huda, Al Balushi, Zainab, Al Mahrooqi, Samira, Al Manji, Asim, Al Sharji, Abdulla, Al Harthi, Khalid, Al Abri, Bader, Al-Raidan, Amira, Al Bahri, Zakiya, Al-Mukhaini, Said, Amin, Mohammed, Prasanna, A.R., Petersen, Eskild, and Al Ajmi, Fatma
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- 2020
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46. Plugging the Gap: Supporting Primary School Teachers to Create Culturally Appropriate English Language Teaching (ELT) English language teaching (ELT) Materials
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Rich, Sarah, Weekes, Samantha, al Jardani, Maryam, al Sinani, Salima, Reinders, Hayo, Series Editor, Coombe, Christine, editor, Littlejohn, Andrew, editor, and Tafazoli, Dara, editor
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- 2019
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47. Challenges and Opportunities for Public Health Service in Oman From the COVID-19 Pandemic: Learning Lessons for a Better Future
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Sulien Al Khalili, Amal Al Maani, Adil Al Wahaibi, Fatma Al Yaquobi, Amina Al-Jardani, Khalid Al Harthi, Abdullah Alqayoudhi, Abdullah Al Manji, Bader Al Rawahi, and Seif Al-Abri
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COVID-19 ,Oman ,public health ,disease surveillance ,One Health ,health care system ,Public aspects of medicine ,RA1-1270 - Abstract
Despite the apparent challenges inflicted by COVID-19 globally, the pandemic provided an opportunity to utilize and expand existing public health capacities for a more adaptive and resilient system during and after each wave of the disease. This paper provides a narrative review of Oman's public health response to the COVID-19 pandemic from January 2020 to July 2021, and the challenges it faced for a more rapid and efficient response. The review demonstrates that the three main pillars influencing the direction of the pandemic and aiding the control are Oman's unified governmental leadership, the move to expand the capacity of the health care system at all levels, and community partnership in all stages of the response including the COVID-19 vaccination campaign. The opportunities identified during response stages in the harmonization of the multisectoral response, streamlining communication channels, addressing vulnerable communities (dormitories, residences at border regions), and providing professional technical leadership provide an excellent precursor for expediting the transformation of Oman's health care system to one with a multisectoral holistic approach. Some of the major challenges faced are the shortage of the public health cadre, lack of a fully integrated digital platform for surveillance, and the scarcity of experts in risk communication and community engagement. A future health system where the center for diseases surveillance and control acts as a nucleus for multisectoral expertise and leadership, which includes community representatives, is crucial to attain optimum health. The destruction inflicted by this prolong COVID-19 pandemic at all levels of human life had valued the importance of investing on preventive and preparedness strategies.
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- 2021
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48. Serotype distribution and antibiotic resistance among invasive Streptococcus pneumoniae from Oman post 13-valent vaccine introduction
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Al-Jardani, Amina, Al Rashdi, Azza, Al Jaaidi, Aisha, Al Bulushi, Mohamed, Al Mahrouqi, Sara, Al-Abri, Seif, Al-Maani, Amal, and Kumar, Rajesh
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- 2019
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49. Evaluation of Four Rapid Antigen Tests for Detection of SARS-CoV-2 virus
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Sulaiman Al-Alawi, Hala Al-Hinai, Nawal Al-Kindi, Mohammed Al-Rashidi, Hanan Al-Kindi, Intisar Al-Shukri, Azza Al-Rashdi, Sachin Jose, and Amina Al-Jardani
- Subjects
diagnostic tests ,routine ,covid-19 ,reverse transcriptase polymerase chain reaction ,Medicine - Abstract
Objectives: Considering the increasing, significant burden that coronavirus disease 2019 (COVID-19) imposes on the healthcare system, the need for simple, rapid, and affordable diagnostic tests to support the existing costly and demanding polymerase chain reaction (PCR) assay becomes required. This prospective diagnostic test accuracy study aims to evaluate the performance of four different COVID-19 rapid antigen tests compared to real-time reverse transcription PCR (rRT-PCR) between June and July 2020 to determine the feasibility of integrating these tests into the diagnostic algorithm in clinical settings. Methods: Swabs were collected from 306 patients and analyzed using rRT-PCR and antigen tests from four different providers. Results: The antigen tests’ sensitivities were 65.8%, 69.8%, 64.0%, and 64.3% for the STANDARD™ Q COVID-19 Ag test, PCL COVID-19 Ag Rapid fluorescent immunoassay (FIA) test, BIOCREDIT COVID-19 Ag test, and Sofia SARS-CoV-2 antigen FIA test, respectively. Specificity was 94.1% for PCL COVID-19 Ag Rapid test and 100% for the other three assays. All assays showed a significant negative correlation between the reference rRT-PCR Ct values and Ag test results. Besides, sensitivities of the STANDARD™ Q COVID-19 Ag test, PCL COVID-19 Ag Rapid FIA test, and BIOCREDIT COVID-19 Ag test improved to ≥ 85% after exclusion of samples with PCR Ct values > 30. Conclusions: The high specificity of the rapid antigen tests and other parameters like simplicity, rapidity, and affordability suggest that antigen tests are likely to be helpful if integrated and interpreted appropriately in stepwise diagnostic algorithms. Given the low sensitivity of 64.0–69.8% of the antigen tests, we recommend that clinically relevant negative results undergo further testing Ag to confirm or exclude a COVID-19 diagnosis.
- Published
- 2021
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50. Control of the 2018–2019 dengue fever outbreak in Oman: A country previously without local transmission
- Author
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Seif S. Al-Abri, Padmamohan J. Kurup, Abdulla Al Manji, Hanan Al Kindi, Adel Al Wahaibi, Amina Al Jardani, Osama Ahmed Mahmoud, Lamia Al Balushi, Bader Al Rawahi, Fatma Al Fahdi, Huda Al Siyabi, Zainab Al Balushi, Samira Al Mahrooqi, Asim Al Manji, Abdulla Al Sharji, Khalid Al Harthi, Bader Al Abri, Amira Al-Raidan, Zakiya Al Bahri, Said Al-Mukhaini, Mohammed Amin, A.R. Prasanna, Eskild Petersen, and Fatma Al Ajmi
- Subjects
Infectious and parasitic diseases ,RC109-216 - Abstract
Background: In December 2018, routine surveillance identified an autochthonous outbreak of dengue fever in Muscat Governorate, Oman, a region previously free of dengue fever. Methods: Routine surveillance confirmed locally acquired cases in the second week of December, leading to a rapid public health response including case management guidance and epidemiological investigations. The main activity was the vector survey using systematic sampling to assess extent of previously unreported Aedes aegypti presence followed by a campaign aimed to eliminate breeding sites of A. aegypti”. Results: During a 5-month period, 343 suspected cases were reported from Muscat Governorate with 122 from the outbreak affected area. Out of 207 probable cases eligible for laboratory testing as per guidelines issued, 59 cases were confirmed. The vector elimination campaign started on January 8, 2019 after a media advocacy using television and social media and concluded on January 23. By the end of campaign, the case load had decreased significantly in the affected area with no reports of locally acquired cases from adjoining areas of Muscat Governorate, indicating no further spread. Conclusions: Rapid notification and early community-wide, extensive vector control activities effectively contained the autochthonous dengue fever virus outbreak. Keywords: Dengue fever, Autochthonous outbreak, Oman, Aedes aegypti, Vector-borne illness, Disease surveillance
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- 2020
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