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Krzem (Si) jest pierwiastkiem występującym w dużych ilościach w skorupie ziemskiej. Niektóre rośliny, takie jak pszenica pobierają Si z gleby i akumulują go w swoich tkankach w większych ilościach niż np. groch czy lucerna. Co ciekawe, suplementacja krzemem wpływa na zwiększenie plonu tych roślin. Ponadto, w wielu przypadkach Si niweluje negatywne skutki działania stresów biotycznych i abiotycznych, co wskazuje na uruchomienie w roślinach procesów, być może poprzez produkcję związków o charakterze regeneracyjnym lub obronnym. Z drugiej strony pszenica, groch i lucerna są roślinami o znanych właściwościach cytotoksycznych. Poszukiwanie związków bioaktywnych pochodzenia roślinnego o potencjalnie pozytywnym wpływie, jest zagadnieniem o dużym znaczeniu zarówno poznawczym jak i praktycznym, ze względu na możliwość wykorzystania takich związków w leczeniu wielu chorób człowieka. Prezentowana praca przedstawia aktualny stan wiedzy na temat pobierania, transportu oraz efektów suplementacji krzemem roślin poddawanych stresom biotycznym i abiotycznym oraz właściwości cytotoksycznych pszenicy, grochu i lucerny. Słowa kluczowe: krzem, pszenica, groch, lucerna, stresy biotyczne i abiotyczne, cytotoksyczność

The study investigated the zearalenone (ZEA) neutralization process as a consequence of metabolization and binding process by the probiotic bacterial strain Lactobacillus paracasei using high performance liquid chromatography (HPLC). In order to determine the nature of the binding process the kinetic and spectroscopic approach were used. Moreover, the influence of ZEA on L. paracasei metabolism was examined by the determination of the proteome profile of cells and the profile of volatile compounds (VOCs) produced by bacteria cells. For this purpose the Matrix-Assisted Laser Desorption/Ionization-Time of Flight mass spectrometry (MALDI-TOF MS) and headspace solid-phase microextraction coupled to gas chromatography/mass spectrometry (HS-SPME/GC-MS) techniques were used. The obtained results indicate that in the mechanism of ZEA neutralization both - metabolization/biotransformation and binding/biosorption processes are involved. Furthermore, the biotransformation of ZEA to both α- and β-ZOL with a predominance of β-ZOL by lactic acid bacteria strain was recorded. The results suggest that the tested microorganism can be used as a potential detoxification agent for grain and feed.

Mycotoxins are toxic metabolites produced by mold fungi, which commonly contaminate cereal crops. These compounds include zearalenone (ZEA), which may disturb the proper functioning of the endocrine system in mammals. The metabolism of ZEA plays a key role in its toxic properties. The type and amount of produced metabolites may contribute to both the reduction and increase in its pathogenic effect. Therefore, it is extremely important to investigate the possible pathways of zearalenone metabolism. The electrochemical approach may prove alternatives for the in vitro and in vivo methods. For this reason, in this study the electrochemical, theoretical and in vitro assays were applied to determine the possible ZEA metabolism mechanism. Electrochemical processes were conducted in the EC/ESI-MS system. The application of HPLC-MS/MS allowed to characterize the obtained electrochemical products specific for phase I and II. Appropriate conditions for redox identification processes were optimized with regard to such parameters as the potential value, mobile phase and working electrode. In addition, the data obtained by instrumental techniques for ZEA metabolism were compared with those obtained by in vitro methods for HepG2 cell lines. Furthermore, results from quantum mechanical calculations allowed to explain the mechanism and the conformational stability of the reduction products.

A study of the mechanism responsible for the zearalenone (ZEA) neutralization by lactic acid bacteria Lactococcus lactis 56 and L929 cell line was carried out by determination of the kinetics of the binding process. In the case of prokaryotic cells the biosorption process was non-linear and three steps were identified. The maximum efficiency of zearalenone binding to L. lactis was almost 30% and no metabolites were observed. In turn, for eukaryotic cells only two steps of the binding process were differentiated, and the efficiency of zearalenone binding was 53.99%. Furthermore, L929 cell line metabolizes zearalenone to α-ZOL and β-ZOL. Additionally, Fourier transform infrared spectroscopy (FTIR) was used for description of the structural changes at the protein and lipid level, while Matrix Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry (MALDI-TOF-MS) was applied to detect changes at the molecular level.

The most critical group of all includes multidrug resistant bacteria that pose a particular threat in hospitals, as they can cause severe and often deadly infections. Modern medicine still faces the difficult task of developing new agents for the effective control of bacterial-based diseases. The targeted administration of nanoparticles can enhance the efficiency of conventional pharmaceutical agents. However, the interpretation of interfaces’ interactions between nanoparticles and biological systems still remains a challenge for researchers. In fact, the current research presents a strategy for using ZnO NPs immobilization with ampicillin and tetracycline. Firstly, the study provides the mechanism of the ampicillin and tetracycline binding on the surface of ZnO NPs. Secondly, it examines the effect of non-immobilized ZnO NPs, immobilized with ampicillin (ZnONPs/AMP) and tetracycline (ZnONPs/TET), on the cells’ metabolism and morphology, based on the protein and lipid profiles. A sorption kinetics study showed that the antibiotics binding on the surface of ZnONPs depend on their structure. The efficiency of the process was definitely higher in the case of ampicillin. In addition, flow cytometry results showed that immobilized nanoparticles present a different mechanism of action. Moreover, according to the MALDI approach, the antibacterial activity mechanism of the investigated ZnO complexes is mainly based on the destruction of cell membrane integrity by lipids and proteins, which is necessary for proper cell function. Additionally, it was noticed that some of the identified changes indicate the activation of defense mechanisms by cells, leading to a decrease in the permeability of a cell’s external barriers or the synthesis of repair proteins.

Patients with type 1 diabetes (T1D) are at increased risk for developing celiac disease (CD). The aim of the study was to assess the usefulness of celiac-specific human leukocyte antigen (HLA) haplotype and the rs3130484 variant of MSH5 gene, a previously described non-HLA variant associated with CD in the Polish population as a first-line screening for CD in T1D pediatric patients. Serological CD screening performed in the T1D group (n = 248) and healthy controls (n = 551) allowed for CD recognition in 20 patients (8.1%) with T1D (T1D + CD group). HLA-DQ2, HLA-DQ8 and the rs3130484 variant were genotyped with TaqMan SNP Genotyping Assays. The T1D + CD group presented a higher, but not statistically significant, frequency of HLA-DQ2 in comparison with T1D subjects. Combining the rs3130484 with HLA-DQ2/HLA-DQ8 typing significantly increased the sensitivity of HLA testing from 32.7% to 68.7%, and the accuracy of estimating CD prediction from 51.7% to 86.4% but decreased the specificity from 100% to 78.2%. The receiver operating characteristic curve analysis confirmed the best discrimination for the combination of both genetic tests with an area under curve reaching 0.735 (95% CI: 0.700–0.7690) in comparison with 0.664 (95% CI: 0.632–0.696) for HLA typing alone. Results show the low utility of HLA-DQ2/HLA-DQ8 typing for CD screening in T1D pediatric patients. Combination of the rs3130484 variant of the MSH5 gene and HLA testing increases both the sensitivity and the predictive value of the test accuracy, but still, the obtained values are not satisfactory for recommending such testing as the first-line screening for CD in T1D patients.

Aim: The purpose of this study was to create an alternative protocol for the DNA-based identification of salivary microbiota focused on the distinguishing of Streptococcus species. Materials & methods: Salivary bacteria were identified using 16S rDNA sequencing and proteins and lipids profiling using MALDI-TOF/MS as well as FTIR analysis. Results: Most of the isolates belonged to streptococci - mostly the salivarious group indistinguishable by the molecular technique. In turn, MALDI analysis allowed for their fast and reliable classification. Although FTIR spectroscopy demonstrated the correct species classification, the spectra interpretation was time consuming and complicated. Conclusion: MALDI-TOF/MS demonstrated the biggest effectiveness in the identification and discrimination between the salivary streptococci, which could be easily incorporated in the workflow of routine microbiological laboratories.

Rapid detection and identification of microorganisms is a challenging and important aspect in a wide range of fields, from medical to industrial, affecting human lives. Unfortunately, classical methods of microorganism identification are based on time-consuming and labor-intensive approaches. Screening techniques require the rapid and cheap grouping of bacterial isolates; however, modern bioanalytics demand comprehensive bacterial studies at a molecular level. Modern approaches for the rapid identification of bacteria use molecular techniques, such as 16S ribosomal RNA gene sequencing based on polymerase chain reaction or electromigration, especially capillary zone electrophoresis and capillary isoelectric focusing. However, there are still several challenges with the analysis of microbial complexes using electromigration technology, such as uncontrolled aggregation and/or adhesion to the capillary surface. Thus, an approach using capillary electrophoresis of microbial aggregates with UV and matrix-assisted laser desorption ionization time-of-flight MS detection is presented.

The resistance of pathogenic bacteria to antibiotics has become a serious problem. The emphasis is placed on the development of new, effective antimicrobial strategies. One of them is the use of AgNPs in association with antibiotic drugs. The aim of this study was to obtain silver nanoparticles functionalized with ampicillin and to investigate the mechanism of binding antibiotics to nanoparticle using high-performance liquid chromatography approach. To confirm the occurrence of silver nanoparticles functionalization, FTIR, MALDI-TOF MS, and DLS analysis and zeta potential measurements were performed. Moreover we assessed the antibacterial activity of biologically synthesized nanoparticles functionalized with ampicillin against a range of gram (+) and gram (-) bacteria strains such as Staphylococcus aureus, Pseudomonas aeruginosa, Klebsiella pneumoniae, Staphylococcus epidermidis, and Escherichia coli.

The zearalenone binding and metabolization ability of probiotic microorganisms, such as lactic acid bacteria, Lactobacillus paracasei, Lactococcus lactis, and yeast Saccharomyces cerevisiae, isolated from food products, were examined. Moreover, the influence of cellular stress (induced by silver nanoparticles) and lyophilization on the effectiveness of tested microorganisms was also investigated. The concentration of zearalenone after a certain time of incubation with microorganisms was determined using high-performance liquid chromatography. The maximum sorption effectiveness for L. paracasei, L. lactis, and S. cerevisiae cultured in non-stress conditions was 53.3, 41.0, and 36.5%, respectively. At the same time for the same microorganisms cultured at cellular stress conditions, the maximum sorption effectiveness was improved to 55.3, 47.4, and 57.0%, respectively. Also, the effect of culture conditions on the morphology of the cells and its metabolism was examined using microscopic technique and matrix-assisted laser desorption ionization-time of flight mass spectrometry, respectively.

The present research is focused on experimental and computational mechanistic study of the nanocomplexes formation through Zn2+(aq)-ovalbumin (OVA) binding. The determination of processes occurring at Zn2+(aq)-OVA interfaces and mechanism of hybrid complexes formation involved the modeling of kinetics and isotherm of Zn2+(aq) binding. Scanning electron microscopy, energy-dispersive X-ray analysis and X-ray diffraction were employed to characterize the nano-crystalline structure and morphology of the Zn2+/ZnO-OVO hybrid complex. Formation of hybrid complex was monitored using Fourier transform infrared spectroscopy. Specific Zn2+(aq) binding sites were pointed using MD simulations. Large-scale MD analysis was carried out to sample conformational space of the formed Zn2+(aq)-OVA complexes. Density functional theory (DFT) calculations were used to investigate the structures of the interaction complexes between zinc(II) and Asp−/Glu− and predict their respective IR spectra, and for mechanistic modeling of oxidation processes involved in the formation and stabilization Zn2+/ZnO-OVO hybrid complex. Negatively charged ovalbumin surface was locally neutralized through rapid Zn2+(aq) adsorption and formation of monolayers via 1:1 Asp−/Glu−/-Zn2+(aq) complexes. The ovalbumin monomer species began to agglomerate, stabilized with Asp−/Glu−-Zn2+(aq)-Glu−/Asp− interface complexes that promoted the formation of nanocomplexes. Finally, antimicrobial assays have shown that Zn2+/ZnO-OVO hybrid complex exhibit an inhibition effect against bacteria (A. baumanii, K. pneumonia) and yeast (C. albicans) strains.

In our study we obtained chemically and biologically synthesized silver nanoparticles functionalized with tetracycline. First time, the kinetics of the antibiotic binding process was investigated in batch adsorption experiments. Functionalization of silver nanoparticles was further confirmed by Fourier transform infrared spectroscopy (FTIR), total organic carbon (TOC), dynamic light scattering (DLS) and zeta potential measurements. We also evaluated the antimicrobial activity of biologically synthesized nanoparticles functionalized with tetracycline against range of gram (⿿) strains such as Escherichia coli, Pseudomonas aeruginosa and Klebsiella pneumoniae as well as gram (+) Staphylococcus aureus , and Staphylococcus epidermidis. Studies showed that biologically synthesized silver nanoparticles are better material for functionalization with tetracycline than chemically obtained nanoparticles stabilized with PVP because they sorbed more tetracycline. Microbiological tests confirmed that functionalized silver nanoparticles exhibit higher antimicrobial activity than unmodified ones and are potentially good antibacterial agents with unique properties.

Mycotoxins are natural compounds produced as secondary metabolites by mold fungi belonging mainly to the Fusarium family, commonly found on plants such as corn or small grains in the temperate climate zone. One of these mycotoxins is zearalenone, which is classified as a xenoestrogen, an exogenous compound which resembles the structure of naturally occurring estrogens with its chemical structure. This property of zearalenone determines its ability to bind to estrogen receptors of cell and its bioaccumulation. This leads to disorders of the hormonal balance of the body, which in consequence may lead to numerous diseases of reproductive system such as prostate, ovarian, cervical or breast cancers. High risk posed by long-term exposure to contaminated food forces the modern science to develop and implement effective methods of zearalenone neutralisation. This work is a review of current state of knowledge on toxic effects of zearalenone, its metabolism in biological systems and proposed methods of its neutralisation.

Primary biliary cholangitis (PBC), primary sclerosing cholangitis (PSC), and inflammatory bowel diseases (IBDs), including Crohn’s disease (CD) and ulcerative colitis (UC), are heterogeneous chronic autoimmune diseases that may share underlying pathogenic mechanisms. Herein, we compared simultaneously analyzed blood transcriptomes from patients with PBC, PSC, and IBD. Microarray-based measurements were conducted using RNA isolated from whole blood samples from 90, 45, 95 and 93 patients with PBC, PSC, CD, and UC, respectively, and 47 healthy controls. Expression levels of selected transcripts were analyzed by quantitative reverse-transcribed PCR using an independent cohort of 292, 71 and 727 patients with PBC, PSC, and IBD, respectively. Of 4026, 2650 and 4967 probe sets differentially expressed (adjusted p-value

The effect of a different pH on Saccharomyces cerevisiae cells modified with calcium ions was investigated by the capillary zone electrophoresis technique. For the identification of the wild strain of S. cerevisiae, the ribosomal nucleic acid sequencing and internal transcribed spacer sequencing as well as spectrometric approach were applied. The potentiometric titration and Fourier transform infrared spectroscopy have shown the occurrence of active functional groups such as carboxyl, amine/hydroxyl, phosphate/hydrogen phosphate groups on the surface of native yeast cells. Moreover, the spectroscopy study in a medium infrared range was carried out to identify the functional groups of yeast cells that participate in calcium ions binding interaction. Furthermore, the microscopic and spectrometric analysis shows that the pH value of the calcium ions solution has a significant effect on the intensity yeast cells clumping. Additionally, the impact of yeast cell clumping on the electrophoretic behaviours was examined. The modification of surface functional groups by calcium ions significantly affected the efficiency of electrophoretic separation. However, these changes did not affect the accuracy of S. cerevisiae identification by MALDI equipment with BioTyper platform. These results form the analytical solution for coupling of electrophoresis and MALDI-TOF MS technique.

Background Primary biliary cholangitis (PBC) and primary sclerosing cholangitis (PSC) are forms of hepatic autoimmunity, and risk for both diseases has a strong genetic component. This study aimed to define the genetic architecture of PBC and PSC within the Polish population. Methods Subjects were 443 women with PBC, 120 patients with PSC, and 934 healthy controls recruited from Gastroenterology Departments in various Polish hospitals. Allelotyping employed a pooled-DNA sample-based genome-wide association study (GWAS) approach, using Illumina Human Omni2.5-Exome BeadChips and the following novel selection criteria for risk loci: blocks of at least 10 single nucleotide polymorphisms (SNPs) in strong linkage disequilibrium, where the distance between each adjacent SNP pair in the block was less than 30 kb, and each SNP was associated with disease at a significance level of P < 0.005. A selected index SNP from each block was validated using TaqMan SNP genotyping assays. Results Nineteen and twenty-one SNPs were verified as associated with PBC and PSC, respectively, by individual genotyping; 19 (10/9, PBC/PSC) SNPs reached a stringent (corrected) significance threshold and a further 21 (9/12, PBC/PSC) reached a nominal level of significance (P < 0.05 with odds ratio (OR) > 1.2 or < 0.83), providing suggestive evidence of association. The SNPs mapped to seven (1p31.3, 3q13, 6p21, 7q32.1, 11q23.3, 17q12, 19q13.33) and one (6p21) chromosome region previously associated with PBC and PSC, respectively. The SNP, rs35730843, mapping to the POLR2G gene promoter (P = 1.2 × 10-5, OR = 0.39) demonstrated the highest effect size, and was protective for PBC, whereas for PSC respective SNPs were: rs13191240 in the intron of ADGRB3 gene (P = 0.0095, OR = 0.2) and rs3822659 (P = 0.0051, OR = 0.236) along with rs9686714 (P = 0.00077, OR = 0.2), both located in the WWC1 gene. Conclusions Our cost-effective GWAS approach followed by individual genotyping confirmed several previously identified associations and discovered new susceptibility loci associated with PBC and/or PSC in Polish patients. However, further functional studies are warranted to understand the roles of these newly identified variants in the development of the two disorders. Electronic supplementary material The online version of this article (doi:10.1186/s12920-016-0239-9) contains supplementary material, which is available to authorized users.

The work presents the kinetic and isotherm studies of silver binding on casein, which was carried out using batch sorption technique. Moreover, the influence of light irradiation on the process was shown. In order to investigate the mechanism of metal ions sorption by casein the zero, pseudo-first order kinetics and Weber-Morris intra-particle diffusion as well as Langmuir and Freundlich isotherm models were used. Furthermore, to specify more precisely, the possible binding mechanism, the spectroscopic (FT-IR&mdash, Fourier Transform Infrared Spectroscopy, Raman), spectrometric (MALDI-TOF MS&mdash, Matrix-Assisted Laser Desorption/Ionization Time Of Flight Mass Spectrometry), microscopic (SEM&mdash, Scanning Electron Microscope, TEM/EDX&mdash, Transmission Electron Microscopy/Energy Dispersive X-ray detector) and thermal (TGA&mdash, Thermogravimetric Analysis, DTG&mdash, Derivative Thermogravimetry) analysis were performed. Kinetic study indicates that silver binding onto casein is a heterogeneous process with two main stages: initial rapid stage related to surface adsorption onto casein with immediate creation of silver nanoparticles and slower second stage of intraglobular diffusion with silver binding in chelated form (metalloproteins) or ion-exchange form. Spectroscopic techniques confirmed the binding process and MALDI-TOF MS analysis show the dominant contribution of the &alpha, casein in the process. Moreover, the treatment of silver-casein complex by artificial physiological fluids was performed.

N-Methylated bismacrocyclic Cu and Ni complexes were synthesised and structurally characterised in the solid state. Their properties in solution were analysed by using NMR and ESR spectroscopies and electrochemical methods. Face-to-face biscyclidenes linked through polymethylene chains form rectangular boxlike cations. These moieties can host some small guest molecules (water, pi-electron donating compounds) and are stabilised by a shell of neighbouring counterions. For the bismacrocyclic dinuclear complexes containing two nickel or two copper ions, the intramolecular interactions between the metallic centres are strengthened through methylation of the macrocyclic components, as compared with the nonmethylated species. We report the electron coupling created by two unpaired electrons coming from two copper centres observed by ESR spectroscopy. Methylation weakens the electron-acceptor properties of the complexes, which leads to less effective binding of the pi-electron-donating guests. It also increases the stability of the lower oxidation states. In the case of the copper complexes, both Cu(II)/Cu(I) and Cu(II)/Cu(III) reversible one-electron transfers are seen in the voltammograms. These changes in properties are interpreted as the consequences of steric repulsion between the methyl substituents and the macrocyclic ring.

Pulse voltammetries allowed to demonstrate that interlocking of a dibenzocrown ether with the homo- or heterodinuclear bismacrocyclic transition metal complexes leads to increased stability of the mixed-valence state. Based on the shape of differential pulse curves, the value of comproportionation constants were obtained, showing that the observed effect was larger for the dinickel (d8d8) than for the dicopper (d9d9) catenane. Nonequivalent copper environments in copper catenane were detected by ESR technique. If both of the coordinated ions were identical, the translocation of the crown ether moiety from one site to the other produced the same catenane arrangement. However, intertwining of the dibenzo-24-crown-8 with a heterodinuclear bismacrocyclic complex lead to two possible arrangements, where the π-electron-rich benzene rings were located in the vicinity of either the copper or nickel-complexing macrocycle, depending on the oxidation state of the coordinated ions. Reverse pulse voltammetry with varying initial potentials, Ei, was found to be a convenient tool to follow these subtle changes of electrochemical behavior of redox centers caused by changed interactions inside the molecule.

Mesogenic tetradentate cis‐enaminoketone Ni(II), Cu(II) and VO(II) complexes with rod‐like and disc‐like molecular shapes were synthesized. In these compounds some of the alkyl chains were perfluorinated. Replacing the alkyl chains by fluorinated chains stabilizes the columnar hexagonal Colh phase whereas lamellar phases are destroyed.

International audience; The HFCCs of the radical cations of a series of amines have been determined at different levels of approximation including the CISD, QCISD, and CCSD ab initio correlated methods and density functional theory approaches employing the B3LYP, PBE0, BHandHLYP, TPSS, and BLYP exchange–correlation functionals. Although quantitative differences with respect to experimental data have been noticed, these are mostly systematic within a given class of N and H atoms. As a consequence, these different levels of theory are reliable in most cases to account for the substituent and structure effects on the HFCCs of amines. Linear regression fits have then been performed to reach quantitative agreement between the theoretical and experimental values. This has finally been substantiated by considering the EPR signal of the recently synthesized radical cations of two derivatives of [10-(4-aminophenyl)-9-anthryl]aniline as well as in confirming a recent assignment of the EPR signal of n-propylamine

We report a theoretical study of ring systems that delocalize electrons in a cyclic array of p orbitals arranged tangentially in sigma-bonding fashion. Sigma-bonded arrays are compared to conventional pi-bonded analogues with respect to orbital symmetry and aromatic/antiaromatic behavior. In a one-to-one correspondence between pi and tangential molecular orbitals of a cycle, local rotation turns each pi to a tangential basis function, changing bonding interactions to antibonding and inverting the order of filling of molecular orbitals. The ipsocentric ring-current mapping approach is used to evaluate aromaticity on the magnetic criterion. As for conventional pi-ring currents, the sigma-ring current in tangential p-p bonded systems is dominated by the HOMO-LUMO transition, corresponding to circulation of four electrons in diatropic (4n + 2)-electron cycles but two in paratropic (4n)-electron cycles. The systems examined here utilize either C 2p or Si 3p orbitals for delocalization. Although interchangeable with C with respect to the fundamental orbital symmetry and ring-current rules, Si bonds at greater internuclear distances, a feature that allows easier design of potentially stable sigma-aromatic structures. Calculations show the wheel-like Si10C50H70 structure 6 as a stable, neutral aromatic molecule with a diatropic ring current following the sigma-bond path formed by Si 3p orbitals.