103 results on '"Abeer M Mahmoud"'
Search Results
2. Zinc Intake and Risk of Prostate Cancer: Case-Control Study and Meta-Analysis.
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Abeer M Mahmoud, Umaima Al-Alem, Firas Dabbous, Mohamed M Ali, Ken Batai, Ebony Shah, and Rick A Kittles
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Medicine ,Science - Abstract
Zinc is an essential dietary element that has been implicated in the pathogenesis of prostate cancer, a cancer that disproportionately affects men of African descent. Studies assessing the association of zinc intake and prostate cancer have yielded inconsistent results. Furthermore, very little is known about the relationship between zinc intake and prostate cancer among African Americans. We examined the association between self-reported zinc intake and prostate cancer in a hospital-based case-control study of African Americans. We then compared our results with previous studies by performing a meta-analysis to summarize the evidence regarding the association between zinc and prostate cancer. Newly diagnosed African American men with histologically confirmed prostate cancer (n = 127) and controls (n = 81) were recruited from an urban academic urology clinic in Washington, DC. Controls had higher zinc intake, with a mean of 14 mg/day versus 11 mg/day for cases. We observed a non-significant, non-linear increase in prostate cancer when comparing tertiles of zinc intake (OR 12.5mg/day 1.3, 95% CI: 0.2,6.5). The pooled estimate from 17 studies (including 3 cohorts, 2 nested case-control, 11 case-control studies, and 1 randomized clinical trial, with a total of 111,199 participants and 11,689 cases of prostate cancer) was 1.07hi vs lo 95% CI: 0.98-1.16. Using a dose-response meta-analysis, we observed a non-linear trend in the relationship between zinc intake and prostate cancer (p for nonlinearity = 0.0022). This is the first study to examine the relationship between zinc intake in black men and risk of prostate cancer and systematically evaluate available epidemiologic evidence about the magnitude of the relationship between zinc intake and prostate cancer. Despite of the lower intake of zinc by prostate cancer patients, our meta-analysis indicated that there is no evidence for an association between zinc intake and prostate cancer.
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- 2016
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3. Differential effects of genistein on prostate cancer cells depend on mutational status of the androgen receptor.
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Abeer M Mahmoud, Tian Zhu, Aijaz Parray, Hifzur R Siddique, Wancai Yang, Mohammad Saleem, and Maarten C Bosland
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Medicine ,Science - Abstract
Blocking the androgen receptor (AR) activity is the main goal of therapies for advanced prostate cancer (PCa). However, relapse with a more aggressive, hormone refractory PCa arises, which harbors restored AR activity. One mechanism of such reactivation occurs through acquisition of AR mutations that enable its activation by various steroidal and non-steroidal structures. Thus, natural and chemical compounds that contribute to inappropriate (androgen-independent) activation of the AR become an area of intensive research. Here, we demonstrate that genistein, a soy phytoestrogen binds to both the wild and the Thr877Ala (T877A) mutant types of AR competitively with androgen, nevertheless, it exerts a pleiotropic effect on PCa cell proliferation and AR activity depending on the mutational status of the AR. Genistein inhibited, in a dose-dependent way, cell proliferation and AR nuclear localization and expression in LAPC-4 cells that have wild AR. However, in LNCaP cells that express the T877A mutant AR, genistein induced a biphasic effect where physiological doses (0.5-5 µmol/L) stimulated cell growth and increased AR expression and transcriptional activity, and higher doses induced inhibitory effects. Similar biphasic results were achieved in PC-3 cells transfected with AR mutants; T877A, W741C and H874Y. These findings suggest that genistein, at physiological concentrations, potentially act as an agonist and activate the mutant AR that can be present in advanced PCa after androgen ablation therapy.
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- 2013
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4. Adipokines in the Crosstalk between Adipose Tissues and Other Organs: Implications in Cardiometabolic Diseases
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Shaghayegh Hemat Jouy, Sukrutha Mohan, Giorgia Scichilone, Amro Mostafa, and Abeer M. Mahmoud
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adipose tissue ,adipokines ,crosstalk ,obesity ,diabetes ,cardiovascular ,Biology (General) ,QH301-705.5 - Abstract
Adipose tissue was previously regarded as a dormant organ for lipid storage until the identification of adiponectin and leptin in the early 1990s. This revelation unveiled the dynamic endocrine function of adipose tissue, which has expanded further. Adipose tissue has emerged in recent decades as a multifunctional organ that plays a significant role in energy metabolism and homeostasis. Currently, it is evident that adipose tissue primarily performs its function by secreting a diverse array of signaling molecules known as adipokines. Apart from their pivotal function in energy expenditure and metabolism regulation, these adipokines exert significant influence over a multitude of biological processes, including but not limited to inflammation, thermoregulation, immune response, vascular function, and insulin sensitivity. Adipokines are pivotal in regulating numerous biological processes within adipose tissue and facilitating communication between adipose tissue and various organs, including the brain, gut, pancreas, endothelial cells, liver, muscle, and more. Dysregulated adipokines have been implicated in several metabolic diseases, like obesity and diabetes, as well as cardiovascular diseases. In this article, we attempted to describe the significance of adipokines in developing metabolic and cardiovascular diseases and highlight their role in the crosstalk between adipose tissues and other tissues and organs.
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- 2024
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5. A pre-protective objective in mining females social contents for identification of early signs of depression using soft computing deep framework
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Hanen Karamti and Abeer M. Mahmoud
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Medicine ,Science - Abstract
Abstract Currently, a noteworthy volume of information is available and shared every day through participation and communication of individuals on social media. These enormous contents with the right exploit and research leads to valuable discoveries. In this study, a deep framework of learning accurate detection of women’s depression is proposed. It is beneficially guided by social media content of individual posts and tweets and an essential support from psycho-linguistic for providing the indicator depression signs vocabulary that creates the embedding words necessary for building the applied approach. The presented model is validated using dual datasets extracted from Twitter: the first dataset is general data formed by 700 women from different countries; the second contains only 80 women from KSA. A third benchmark dataset CLPsych 2015 is used for comparative analysis purposes. The model proved its performance on the three datasets and the obtained and reported in this paper results shows its effectiveness.
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- 2023
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6. Comparison of Adiposomal Lipids between Obese and Non-Obese Individuals
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Mohamed Hussein, Imaduddin Mirza, Mohammed Morsy, Amro Mostafa, Chandra Hassan, Mario Masrur, Francesco M. Bianco, Subbaiah Papasani, Irena Levitan, and Abeer M. Mahmoud
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adipose tissues ,extracellular vesicles ,adiposomes ,obesity ,lipidomics ,phosphatidylcholine ,Microbiology ,QR1-502 - Abstract
Our recent findings revealed that human adipose tissues (AT)-derived extracellular vesicles (adiposomes) vary in cargo among obese and lean individuals. The main objective of this study was to investigate the adiposomal lipid profiles and their correlation with cardiometabolic risk factors. AT samples were collected from obese subjects and lean controls and analyzed for their characteristics and lipid content. In addition, we measured the correlation between adiposomal lipid profiles and body composition, glucose and lipid metabolic profiles, brachial artery vasoreactivity, AT arteriolar flow-induced dilation, and circulating markers such as IL-6, C-reactive protein, and nitric oxide (NO). Compared to lean controls, adiposomes isolated from obese subjects were higher in number after normalization to AT volume. The two major lipid classes differentially expressed were lysophosphatidylcholine/phosphatidylcholine (LPC/PC) and ceramides (Cer). All lipids in the LPC/PC class were several-fold lower in adiposomes from obese subjects compared to lean controls, on top of which were PC 18:2, PC 18:1, and PC 36:3. Most ceramides were markedly upregulated in the obese group, especially Cer d37:0, Cer d18:0, and Cer d39:0. Regression analyses revealed associations between adiposomal lipid profiles and several cardiometabolic risk factors such as body mass index (BMI), fat percentage, insulin resistance, arteriolar and brachial artery vasoreactivity, NO bioavailability, and high-density lipoproteins (HDL-C). We conclude that the ability of adiposomes from obese subjects to disrupt cardiometabolic function could be partly attributed to the dysregulated lipid cargo.
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- 2024
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7. Towards Developing a Metaverse Authentication Model for Mobile Features.
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Ibrahim F. Ibrahim, Mohammed M. Morsey, Abeer M. Mahmoud, and El-Sayed M. El-Horbaty
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- 2023
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8. Genetically prolonged beige fat in male mice confers long-lasting metabolic health
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Ruifan Wu, Jooman Park, Yanyu Qian, Zuoxiao Shi, Ruoci Hu, Yexian Yuan, Shaolei Xiong, Zilai Wang, Gege Yan, Sang-Ging Ong, Qing Song, Zhenyuan Song, Abeer M. Mahmoud, Pingwen Xu, Congcong He, Robert W. Arpke, Michael Kyba, Gang Shu, Qingyan Jiang, and Yuwei Jiang
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Science - Abstract
Abstract A potential therapeutic target to curb obesity and diabetes is thermogenic beige adipocytes. However, beige adipocytes quickly transition into white adipocytes upon removing stimuli. Here, we define the critical role of cyclin dependent kinase inhibitor 2A (Cdkn2a) as a molecular pedal for the beige-to-white transition. Beige adipocytes lacking Cdkn2a exhibit prolonged lifespan, and male mice confer long-term metabolic protection from diet-induced obesity, along with enhanced energy expenditure and improved glucose tolerance. Mechanistically, Cdkn2a promotes the expression and activity of beclin 1 (BECN1) by directly binding to its mRNA and its negative regulator BCL2 like 1 (BCL2L1), activating autophagy and accelerating the beige-to-white transition. Reactivating autophagy by pharmacological or genetic methods abolishes beige adipocyte maintenance induced by Cdkn2a ablation. Furthermore, hyperactive BECN1 alone accelerates the beige-to-white transition in mice and human. Notably, both Cdkn2a and Becn1 exhibit striking positive correlations with adiposity. Hence, blocking Cdkn2a-mediated BECN1 activity holds therapeutic potential to sustain beige adipocytes in treating obesity and related metabolic diseases.
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- 2023
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9. Adiposomes from Obese-Diabetic Individuals Promote Endothelial Dysfunction and Loss of Surface Caveolae
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Imaduddin Mirza, Mohamed Haloul, Chandra Hassan, Mario Masrur, Amro Mostafa, Francesco M. Bianco, Mohamed M. Ali, Richard D. Minshall, and Abeer M. Mahmoud
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extracellular vesicles ,adiposomes ,glycosphingolipids (GSLs) ,endothelial dysfunction ,caveolae ,Src kinase ,Cytology ,QH573-671 - Abstract
Glycosphingolipids (GSLs) are products of lipid glycosylation that have been implicated in the development of cardiovascular diseases. In diabetes, the adipocyte microenvironment is characterized by hyperglycemia and inflammation, resulting in high levels of GSLs. Therefore, we sought to assess the GSL content in extracellular vesicles derived from the adipose tissues (adiposomes) of obese-diabetic (OB-T2D) subjects and their impact on endothelial cell function. To this end, endothelial cells were exposed to adiposomes isolated from OB-T2D versus healthy subjects. Cells were assessed for caveolar integrity and related signaling, such as Src-kinase and caveolin-1 (cav-1) phosphorylation, and functional pathways, such as endothelial nitric oxide synthase (eNOS) activity. Compared with adiposomes from healthy subjects, OB-T2D adiposomes had higher levels of GSLs, especially LacCer and GM3; they promoted cav-1 phosphorylation coupled to an obvious loss of endothelial surface caveolae and induced eNOS-uncoupling, peroxynitrite generation, and cav-1 nitrosylation. These effects were abolished by Src kinase inhibition and were not observed in GSL-depleted adiposomes. At the functional levels, OB-T2D adiposomes reduced nitric oxide production, shear response, and albumin intake in endothelial cells and impaired flow-induced dilation in healthy arterioles. In conclusion, OB-T2D adiposomes carried a detrimental GSL cargo that disturbed endothelial caveolae and the associated signaling.
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- 2023
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10. DNA methylation profile of genes involved in inflammation and autoimmunity correlates with vascular function in morbidly obese adults
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Mohamed M. Ali, Dina Naquiallah, Maryam Qureshi, Mohammed Imaduddin Mirza, Chandra Hassan, Mario Masrur, Francesco M. Bianco, Patrice Frederick, Giulianotti P. Cristoforo, Antonio Gangemi, Shane A. Phillips, and Abeer M. Mahmoud
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dna methylation ,obesity ,inflammation ,vascular function ,flow-induced dilation ,cardiometabolic risk ,Genetics ,QH426-470 - Abstract
Obesity is a major risk factor for cardiovascular disease. Blood-detected epigenetic profiles may serve as non-invasive clinically relevant biomarkers. Therefore, we investigated DNA methylation of genes involved in inflammation in peripheral blood of obese subjects and lean controls and their correlation with cardiometabolic measurements. We obtained blood and adipose tissue (AT) samples from bariatric patients (n = 24) and control adults (n = 24). AT-isolated arterioles were tested for flow-induced dilation (FID) and production of nitric oxide (NO) and reactive oxygen species (ROS). Brachial artery flow-mediated dilation (FMD) was measured via doppler ultrasound. Promoter methylation of 94 genes involved in inflammation and autoimmunity were analysed in whole-blood DNA in relation to vascular function and cardiometabolic risk factors. 77 genes had ahigher methylated fraction in the controls compare obese subjects and 28 proinflammatory genes were significantly hypomethylated in the obese individuals; on top of these genes are CXCL1, CXCL12, CXCL6, IGF2BP2, HDAC4, IL12A, and IL17RA. Fifteen of these genes had significantly higher mRNA in obese subjects compared to controls; on top of these genes are CXCL6, TLR5, IL6ST, EGR1, IL15RA, and HDAC4. Methylation % inversely correlated with BMI, total fat %, visceral fat%, blood pressure, fasting plasma insulin, serum IL6 and C-reactive protein, arteriolar ROS, and alcohol consumption and positive correlations with lean %, HDL, plasma folate and vitamin B12, arteriolar FID and NO production, and brachial FMD. Our results suggest that vascular dysfunction in obese adults may be attributed to asystemic hypomethylation and over expression of the immune-related genes.
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- 2022
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11. A Dual Soft-Computing Based on Genetic Algorithm and Fuzzy Logic Defect Recognition for Gearbox and Motors: Attempts Toward Optimal Performance
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Abeer M. Mahmoud, Maha M. A. Lashin, Fadwa Alrowais, and Hanen Karamti
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Genetic algorithm (GA) ,fuzzy logic (FL) ,gear box and motor ,fault identification ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Motor and gearbox are considered the main components in various machines related to its supplying power and transmitting motion role. Operating machines acquire vibration signal that are continuously monitoring by sensors placing close to vibration source. This for processing and identify the machine’ components status. Breakdown of the rotating machine causes significant losses and costs, so the analysis of its vibration signals proved literately avoiding these drawbacks with effective faults diagnosis. This paper proposing two models for gearbox and motor faults identification as an attempt towards finding the optimal performance: The first developed model is a fuzzy logic (FL) based model and the other is genetic algorithm (GA) based model. The intended output of both models reduce time and cost of maintenance. It also indirectly increases the machine component’s life. Additionally, the computational analysis proved that, concerning execution time and accuracy; and with the powerful straight forward representation for uncertainties offered by the Fuzzy Logic; it is indeed reliable, however it presented lower classification accuracy (96% for gear box faults and 93% for motor faults) and lower generalization schema. Yet, the proposed strategy which integrates GA and SVM recorded high performances in optimization and higher classification capabilities (97% for both gear box and motors faults). These factors illustrate the effectiveness and optimal performance of the genetic based model.
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- 2022
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12. Hybrid Shallow Learning and Deep Learning for Feature Extraction and Image Retrieval.
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Hanen Karamti, Hadil Shaiba, and Abeer M. Mahmoud
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- 2020
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13. An Effective Sparse Autoencoders based Deep Learning Framework for fMRI Scans Classification.
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Abeer M. Mahmoud, Hanen Karamti, and Fadwa M. Alrowais
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- 2020
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14. A Hybrid Deep Contractive Autoencoder and Restricted Boltzmann Machine Approach to Differentiate Representation of Female Brain Disorder.
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Abeer M. Mahmoud, Fadwa M. Alrowais, and Hanen Karamti
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- 2020
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15. Racial Disparity in Anthracycline-induced Cardiotoxicity in Breast Cancer Patients
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Swetha Balaji, Antu K. Antony, Harry Tonchev, Giorgia Scichilone, Mohammed Morsy, Hania Deen, Imaduddin Mirza, Mohamed M. Ali, and Abeer M. Mahmoud
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cardiotoxicity ,anthracyclines ,breast cancer ,genetic polymorphism ,racial disparity ,socioeconomic determinants ,Biology (General) ,QH301-705.5 - Abstract
Breast cancer has become the most common cancer in the US and worldwide. While advances in early detection and treatment have resulted in a 40% reduction in breast cancer mortality, this reduction has not been achieved uniformly among racial groups. A large percentage of non-metastatic breast cancer mortality is related to the cardiovascular effects of breast cancer therapies. These effects appear to be more prevalent among patients from historically marginalized racial/ethnic backgrounds, such as African American and Hispanic individuals. Anthracyclines, particularly doxorubicin and daunorubicin, are the first-line treatments for breast cancer patients. However, their use is limited by their dose-dependent and cumulative cardiotoxicity, manifested by cardiomyopathy, ischemic heart disease, arrhythmias, hypertension, thromboembolic disorders, and heart failure. Cardiotoxicity risk factors, such as genetic predisposition and preexisting obesity, diabetes, hypertension, and heart diseases, are more prevalent in racial/ethnic minorities and undoubtedly contribute to the risk. Yet, beyond these risk factors, racial/ethnic minorities also face unique challenges that contribute to disparities in the emerging field of cardio-oncology, including socioeconomic factors, food insecurity, and the inability to access healthcare providers, among others. The current review will address genetic, clinical, and social determinants that potentially contribute to this disparity.
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- 2023
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16. Editorial for the Special Issue 'Cardiometabolic Health in Relation to Diet and Physical Activity: Experimental and Clinical Evidence'
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Abeer M. Mahmoud
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n/a ,Nutrition. Foods and food supply ,TX341-641 - Abstract
This Special Issue seeks to compile a centered, influential, and well-referenced volume on the impact of diet and physical activity on various cardiometabolic risk factors [...]
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- 2023
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17. A New Deep Stacked Architecture for Multi-Fault Machinery Identification With Imbalanced Samples
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Hanen Karamti, Maha M. A. Lashin, Fadwa M. Alrowais, and Abeer M. Mahmoud
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Fault diagnosis ,imbalanced samples ,logistic regression ,rotating machinery ,sparse autoencoders ,variational autoencoder ,Electrical engineering. Electronics. Nuclear engineering ,TK1-9971 - Abstract
Effective intelligent fault diagnosis of rotating machinery using its vibrational signals has a considerable influence on certain analysis factors such as the reliability, performance, and productivity of a variety of modern manufacturing machines. Traditional intelligent approaches lack generalization schemes and add the burden of extracting features from data-driven cases. On the other hand, the Deep Learning (DL) studies have reported capabilities higher than the expectations of the researchers’ objectives. In this context, this paper proposes a new deep architecture based on Stacked Variant Autoencoders for multi-fault machinery identification with imbalanced samples. The proposed model starts with a Variational Autoencoder (VAE) for facilitating data augmentation of small and imbalanced data samples using Gaussian distribution. After the preparation of suitable samples based on quality and size, the preprocessed vibration signals obtained are injected into the deep framework. The proposed deep architecture contains two subsequent unsupervised Sparse Autoencoders (SAE) with a penalty term that helps in acquiring more abstract and essential features as well as avoiding redundancy. The output of the second SAE is integrated on a supervised Logistic Regression (LR) with 10 classes. This is utilized for the proposed classifier training to achieve accurate fault identification. Experimental results show the efficiency of the proposed model which achieved an accuracy of 93.2%. In addition, for extensive comparative analysis issue, the Generative Adversarial Network (GAN) and triNetwork Generative Adversarial Network (tnGAN) were both implemented on the vibrational signal data, where the proposed method reported better results in terms of training and testing time and overall accuracy.
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- 2021
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18. Obesity-Associated Vitamin D Deficiency Correlates with Adipose Tissue DNA Hypomethylation, Inflammation, and Vascular Dysfunction
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Imaduddin Mirza, Ariej Mohamed, Hania Deen, Swetha Balaji, Duaa Elsabbahi, Amier Munasser, Dina Naquiallah, Uzma Abdulbaseer, Chandra Hassan, Mario Masrur, Francesco M. Bianco, Mohamed M. Ali, and Abeer M. Mahmoud
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adipokines ,adipose tissues ,DNA methylation ,inflammation ,obesity ,vascular dysfunction ,Biology (General) ,QH301-705.5 ,Chemistry ,QD1-999 - Abstract
Vitamin D (VD) deficiency is a hallmark of obesity and vascular dysfunction. We sought to test the hypothesis that VD deficiency may contribute to obesity-related vascular dysfunction by inducing adipokine hypomethylation and augmented expression. To this end, we collected blood and adipose tissues (ATs) from a cohort of 77 obese participants who were classified as having mild, moderate, or severe VD deficiency. The body composition, vascular reactivity, cardiometabolic profiles, and DNA methylation of 94 inflammation-related adipokines were measured. Our results show that higher degrees of VD deficiency were associated with lower DNA methylation and induced the expression of inflammatory adipokines such as B-cell lymphoma 6 (BCL6), C-X-C Motif Chemokine Ligand 8 (CXCL8), histone deacetylase 5 (HDAC5), interleukin 12A (IL12A), and nuclear factor κB (NFκB) in the ATs. They were also associated with higher BMI and total and visceral fat mass, impaired insulin sensitivity and lipid profiles, AT hypoxia, and higher concentrations of circulating inflammatory markers. Moderate and severe VD deficiency correlated with impaired vasoreactivity of the brachial artery and AT-isolated arterioles, reduced nitric oxide generation, and increased arterial stiffness. In a multivariate regression analysis, the VD deficiency level strongly predicted the adipokine methylation score, systemic inflammation, and microvascular dysfunction. In conclusion, our findings suggest that VD deficiency is a possible contributor to obesity-related adipokine hypomethylation, inflammation, and vascular dysfunction.
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- 2022
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19. Effects of Exercise Mode on Improving Cardiovascular Function and Cardiorespiratory Fitness After Bariatric Surgery: A Narrative Review
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Abeer M. Mahmoud, Andréa Lúcia Gonçalves da Silva, Larissa Delgado André, Chueh-Lung Hwang, Richard Severin, Lisa Sanchez-Johnsen, Audrey Borghi-Silva, Ahmed Elokda, Ross Arena, and Shane A. Phillips
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Cardiorespiratory Fitness ,Physical Fitness ,Rehabilitation ,Humans ,Bariatric Surgery ,Physical Therapy, Sports Therapy and Rehabilitation ,Exercise ,Obesity, Morbid ,Exercise Therapy - Abstract
Obesity affects 600 million people globally and increases the risk of developing cardiovascular disease, stroke, diabetes, and cancer. Bariatric surgery is an increasingly popular therapeutic intervention for morbid obesity to induce rapid weight loss and reduce obesity-related comorbidities. However, some bariatric surgery patients, after what is considered a successful surgical procedure, continue to manifest obesity-related health issues, including weight gain, reduced physical function, persistent elevations in blood pressure, and reduced cardiorespiratory fitness. Cardiorespiratory fitness is a strong predictor of mortality and several health outcomes and could be improved by an appropriate exercise prescription after bariatric surgery. This review provides a broad overview of exercise training for patients after bariatric surgery and discusses cardiorespiratory fitness and other potential physiological adaptations in response to exercise training.
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- 2023
20. Accompanying deep framework for faults in motor and gearbox with disproportion vibrational samples
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Hanen Karamti, Maha M. A. Lashin, Fadwa Alrowais, and Abeer M. Mahmoud
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Artificial Intelligence ,Software - Published
- 2022
21. Adipose Tissue Hypoxia Correlates with Adipokine Hypomethylation and Vascular Dysfunction
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Mohamed M. Ali, Chandra Hassan, Mario Masrur, Francesco M. Bianco, Dina Naquiallah, Imaduddin Mirza, Patrice Frederick, Eduardo T. Fernandes, Cristoforo P. Giulianotti, Antonio Gangemi, Shane A. Phillips, and Abeer M. Mahmoud
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visceral adipose tissue ,obesity ,hypoxia ,DNA methylation ,TET1 ,inflammation ,Biology (General) ,QH301-705.5 - Abstract
Obesity is characterized by the accumulation of dysfunctional adipose tissues, which predisposes to cardiometabolic diseases. Our previous in vitro studies demonstrated a role of hypoxia in inducing adipokine hypomethylation in adipocytes. We sought to examine this mechanism in visceral adipose tissues (VATs) from obese individuals and its correlation with cardiometabolic risk factors. We propose an involvement of the hypoxia-inducible factor, HIF1α, and the DNA hydroxymethylase, TET1. Blood samples and VAT biopsies were obtained from obese and non-obese subjects (n = 60 each) having bariatric and elective surgeries, respectively. The analyses of VAT showed lower vascularity, and higher levels of HIF1α and TET1 proteins in the obese subjects than controls. Global hypomethylation and hydroxymethylation were observed in VAT from obese subjects along with promoter hypomethylation of several pro-inflammatory adipokines. TET1 protein was enriched near the promotor of the hypomethylated adipokines. The average levels of adipokine methylation correlated positively with vascularity and arteriolar vasoreactivity and negatively with protein levels of HIF1α and TET1 in corresponding VAT samples, serum and tissue inflammatory markers, and other cardiometabolic risk factors. These findings suggest a role for adipose tissue hypoxia in causing epigenetic alterations, which could explain the increased production of adipocytokines and ultimately, vascular dysfunction in obesity.
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- 2021
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22. High Glucose and Advanced Glycation End Products Induce CD147-Mediated MMP Activity in Human Adipocytes
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Abeer M. Mahmoud and Mohamed M. Ali
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CD147 ,matrix metalloproteinases ,adipocytes ,diabetes ,glycosylation ,advanced glycation end-products ,Cytology ,QH573-671 - Abstract
Basigin (CD147) is a transmembrane glycoprotein that regulates several physiological processes, including the production and activity of matrix metalloproteinases (MMPs). The activity of CD147 depends mainly on its glycosylation, which varies among pathophysiological conditions. However, it is unknown whether CD147 activity or its function in MMP regulation are affected by the diabetic environment, which is characterized by high glucose (HG) levels and an excess of glycation end products (AGEs). In this study, we investigated the effect of HG and AGEs on CD147 expression in human adipocytes. We also examined the mediating role of nuclear factor kappa B (NFκB) and receptor of AGE (RAGE) to this effect. Our findings show that carboxymethyl lysine and HG increased CD147 expression and glycosylation, which was accompanied by increases in MMP2 and MMP9 expression and activity, as well as upregulations of the N-acetylglucosaminyltransferase, MGAT5. These effects were abolished by NFκB and RAGE inhibition, CD147 gene silencing, and by the glycosylation inhibitor, tunicamycin. In conclusion, the current findings indicate that AGEs and HG induce CD147 expression and glycosylation in adipocytes, with possible mediation by NFκB and RAGE. One of the critical outcomes of this pathway is augmented MMP activity known to contribute to cardiovascular complications in diabetes.
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- 2021
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23. Gaussian Mixture with Max Expectation Guide for Stacked Architecture of Denoising Autoencoder and DRBM for Medical Chest Scans and Disease Identification
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Mona Jamjoom, Abeer M. Mahmoud, Safia Abbas, and Rania Hodhod
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Computer Networks and Communications ,Hardware and Architecture ,Control and Systems Engineering ,deep learning ,pneumonia prediction ,Gaussian mixture ,convolution autoencoder ,Boltzmann machine ,Signal Processing ,Electrical and Electronic Engineering - Abstract
Artificial intelligence (AI), in particular deep learning, has proven to be efficient in medical diagnosis. This paper introduces a new hybrid deep learning model for pneumonia diagnosis based on chest CT scans. At the core of the model, a Gaussian mixture is combined with the expectation-maximization algorithm (EMGMM) to extract the regions of interest (ROI), while a convolutional denoising autoencoder (DAE) and deep restricted Boltzmann machine (DRBM) are combined for the classification. In order to prevent the model from learning trivial solutions, stochastic noises were added as an input to the unsupervised learning phase. The dataset used in this work is a publicly available dataset of chest X-rays for pneumonia on the Kaggle website; it contains 5856 images with 1583 normal cases and 4273 pneumonia cases, with an imbalance ratio (IR) of 0.46. Several operations including zooming, flipping, shifting and rotation were used in the augmentation phase to balance the data distribution across the different classes, which led to enhancing the IR value to 0.028. The computational analysis of the results show that the proposed model is promising as it provides an average accuracy value of 98.63%, sensitivity value of 96.5%, and specificity value of 94.8%.
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- 2022
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24. CD147 Levels in Blood and Adipose Tissues Correlate with Vascular Dysfunction in Obese Diabetic Adults
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Mohamed M. Ali, Imaduddin Mirza, Dina Naquiallah, Chandra Hassan, Mario Masrur, Francesco M. Bianco, and Abeer M. Mahmoud
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obesity ,diabetes ,glycosylation ,matrix metalloproteinases ,vascular dysfunction ,Article ,advanced glycation end-products ,CD147 ,visceral adipose tissue ,cardiometabolic risk ,RC666-701 ,Diseases of the circulatory (Cardiovascular) system ,Pharmacology (medical) ,General Pharmacology, Toxicology and Pharmaceutics - Abstract
CD147 is a glycoprotein that stimulates the production of matrix metalloproteinases (MMPs), known contributors to cardiovascular risk. The activity of CD147 protein depends on its glycosylation. However, it is unclear whether CD147 protein expression or glycosylation are influenced by the diabetic milieu characterized by hyperglycemia and abundant glycation-end-products (AGEs). We examined the circulating and visceral adipose tissue (VAT) levels of CD147 and their correlation with vascular function in obese, obese diabetic, and non-obese controls (n = 40, each). The circulating levels of CD147 and the glycosylated CD147 protein in VAT were considerably higher in obese, particularly obese diabetic subjects compared to controls. Obese diabetics had the lowest brachial and arteriolar vasoreactivity and the highest carotid pulse-wave velocity (PWV, a measure of arterial stiffness) among the three groups. CD147 correlated positively with body mass index (BMI), total and visceral fat mass, PWV, and plasma levels of glucose, insulin, MMPs, and AGEs and negatively with brachial artery and VAT-arteriolar vasoreactivity and nitric oxide production. Multivariate regression revealed that BMI, body fat mass, insulin, and glucose levels significantly predicted CD147. Our data suggest that higher levels of CD147 in obese subjects, particularly those with diabetes, are linked to vascular dysfunction and several cardiometabolic risk factors.
- Published
- 2022
25. A Multimodal Deep Learning Approach for Identification of Severity of Reflective Depression
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Hanen Karamti, Eatedal Alabdulkreem, Hedia Zardi, and Abeer M Mahmoud
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Control and Optimization ,Artificial Intelligence ,Computer Networks and Communications ,Hardware and Architecture ,Control and Systems Engineering ,Computer Science (miscellaneous) ,Electrical and Electronic Engineering ,Information Systems - Published
- 2022
26. A Hybrid Genetic Algorithm - Decision Tree Classifier.
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Abdel-Badeeh M. Salem and Abeer M. Mahmoud
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- 2003
27. The Role of Adipocyte‐derived Extracellular Vesicles in Diabetes‐associated Endothelial Dysfunction
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Imaduddin Mirza, Chandra Hassan, Mario Masrur, Francesco M. Bianco, Mohamed M. Ali, and Abeer M. Mahmoud
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Genetics ,Molecular Biology ,Biochemistry ,Biotechnology - Published
- 2022
28. A hybrid late fusion-genetic algorithm approach for enhancing CBIR performance
- Author
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Hanen Karamti, Myriam Hadjouni, and Abeer M. Mahmoud
- Subjects
Fusion ,Fitness function ,Computer Networks and Communications ,Computer science ,Heuristic ,business.industry ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,020207 software engineering ,Pattern recognition ,Computational intelligence ,02 engineering and technology ,Image (mathematics) ,Hardware and Architecture ,Genetic algorithm ,0202 electrical engineering, electronic engineering, information engineering ,Media Technology ,Benchmark (computing) ,Artificial intelligence ,business ,Image retrieval ,Software - Abstract
Accurate discrimination of images features is a main success factor towards efficient content-based image retrieval systems. These features can be extracted using local and/or global descriptors. Researchers efforts showed that, hybrid descriptors reported superior results compared to methods that use single descriptor, where hybridization certainly complements benefits from different perspectives. Genetic Algorithm (GA) is a heuristic computational intelligence approach that can be used to achieve the optimal satisfactory user image retrieval requests. In this paper, a new hybrid efficient and effective evolutionary retrieval approach (CBIR-GAF) based on late fusion of four global descriptors is proposed. Each descriptor produces a list of retrieved similar images to user query image and if these lists are merged correctly by late fusion, the results are improved. Thus, GA occurs to assign different weights to each retrieved image while merging, and then it optimizes these weights with a suitable fitness function to select optimum heterogeneous retrieved images. The proposed approach is evaluated on two benchmark datasets (Inria Holidays and Oxford5k), and reported a promising results where it enhanced the average accuracy in comparison of literature techniques.
- Published
- 2020
29. A Hybrid Deep Contractive Autoencoder and Restricted Boltzmann Machine Approach to Differentiate Representation of Female Brain Disorder
- Author
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Fadwa Alrowais, Hanen Karamti, and Abeer M. Mahmoud
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Restricted Boltzmann machine ,business.industry ,Computer science ,Deep learning ,Boltzmann machine ,020206 networking & telecommunications ,02 engineering and technology ,Machine learning ,computer.software_genre ,Autoencoder ,Discriminative model ,Robustness (computer science) ,0202 electrical engineering, electronic engineering, information engineering ,General Earth and Planetary Sciences ,020201 artificial intelligence & image processing ,Artificial intelligence ,Representation (mathematics) ,business ,Transfer of learning ,computer ,General Environmental Science - Abstract
Deep Learning approach dragged the full attention of researcher in medical images due to their superior literature reported success and promising directions. Concluding the most discriminative set of features greatly represents a valuable guide for achieving the satisfaction performance of a medical diagnosing system. Despite, many methods proposed for such objective, the restricted Boltzmann machines outperform as they learn features directly from data, however they lack the optimal classification performance due to data complexity. Additionally, the contractive au-toencoder offers regularized term that explicitly increases the robustness of features representation and enhancement in overall performance. This paper proposes a novel deep learning framework for diagnosing female brain disorder from fMRI scans. The configuration combines the contractive autoencoder and the discriminative restricted Boltz-mann machine (DRBM) as we seek an improvement for the classification of fMRI. The demonstrated effectiveness of the contractive autoencoder supports fitting the probability distribution model of the DRBM and transfer learning to a deeper level. Our experimental indicates that the proposed model is able to detect female brain disorder with an accuracy of 88.17% and improved literature reported results on common issues.
- Published
- 2020
30. Abstract 10777: Circulating and Adipose Tissue Levels of CD147 Are Linked to Vascular Dysfunction in Obese Diabetic Adults
- Author
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Mohamed M Ali, Chandra Hassan, MArio MAsrur, Francesco M Bianco, and Abeer M Mahmoud
- Subjects
Physiology (medical) ,Cardiology and Cardiovascular Medicine - Abstract
Background: Extracellular matrix metalloproteinase inducer (EMMPRIN; CD147) is a transmembrane glycoprotein that stimulates the production of matrix metalloproteinases (MMPs). These MMPs mediate vascular remodeling and are considered biomarkers for cardiovascular risk. The activity of CD147 depends mainly on its glycosylation, which varies significantly among different conditions. However, it is unclear if CD147 glycosylation or its role in MMP upregulation is influenced by the diabetic milieu characterized by high glucose levels and abundant glycation end products (AGEs). In this study, we sought to investigate the differential expression and glycosylation levels of CD147 in obese, diabetic (OB-T2D) individuals compared to non-OB controls. Methods: Blood and adipose tissue (AT) samples were obtained from OB-T2D individuals and controls (n=40, each). DEXA scanning was used for body composition analyses. Flow-induced dilation (FID) was assessed in vivo in the brachial artery and ex vivo in AT-isolated arterioles. Other cardiometabolic risk factors related to glucose and lipid metabolism and systemic inflammation were measured. Results: Circulating CD147 was considerably greater in OB individuals, mirroring the glycosylated CD147 and the N-acetylglucosaminyltransferase, MGAT5 protein levels in the AT. Within the OB-T2D group, AT and circulating CD147 correlated with higher body mass index, total and visceral fat percentage, fasting plasma glucose and insulin, insulin resistance measurement (HOMA-IR), glycosylated hemoglobin, systolic BP, and plasma levels of MMP2/9, AGEs (Carboxymethyl lysine and methyl-glyoxal-lysine dimer), C-reactive protein, interleukin 6, and tumor necrosis factor-alpha. AT-arteriolar FID was significantly lower in the OB-T2D individuals across all pressure gradients, while carotid pulse wave velocity (PWV) was higher, indicating arterial stiffness. CD147 correlated negatively with brachial artery and AT-arteriolar FID and flow-induced nitric oxide production and positively with PWV. Conclusion: Our findings imply that vascular dysfunction in OB-T2D patients is linked to higher levels of CD147 and its glycosylated fraction, which in turn is associated with other cardiometabolic risk factors.
- Published
- 2021
31. DNA Hypomethylation as a Potential Link between Excessive Alcohol Intake and Cardiometabolic Dysfunction in Morbidly Obese Adults
- Author
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Imaduddin Mirza, Dina Naquiallah, Ariej Mohamed, Uzma Abdulbaseer, Chandra Hassan, Mario Masrur, Mohamed M. Ali, Shane A. Phillips, and Abeer M. Mahmoud
- Subjects
alcohol ,DNA methylation ,obesity ,cardiovascular ,adipose tissues ,inflammation ,vasodilation ,folate ,B vitamins ,Medicine (miscellaneous) ,General Biochemistry, Genetics and Molecular Biology - Abstract
A large percentage of obese patients in the United States suffer a comorbid substance use disorder, mainly alcohol use. Alcohol consumption interferes with the absorption of dietary methyl donors such as folate required for the one-carbon metabolism pathway and subsequently for DNA methylation. In this study, we assessed the association between alcohol consumption and DNA methylation in obese subjects. We obtained visceral adipose tissue (VAT) biopsies from bariatric patients. DNA methylation of 94 genes implicated in inflammation and immunity were analyzed in VAT in relation to alcohol consumption data obtained via questionnaires. Vasoreactivity was measured in the brachial artery and the VAT-isolated arterioles. Pro-inflammatory genes were significantly hypomethylated in the heavy drinking category correlating with higher levels of circulating inflammatory cytokines. Alcohol consumption correlated positively with body mass index (BMI), fat percentage, insulin resistance, impaired lipid profile, and systemic inflammation and negatively with plasma folate and vitamin B12, inflammatory gene DNA methylation, and vasoreactivity. In conclusion, these data suggest that alcohol intake is associated with lower DNA methylation and higher inflammation and cardiometabolic risk in obese individuals.
- Published
- 2022
32. A deep locality-sensitive hashing approach for achieving optimal image retrieval satisfaction
- Author
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Hanen Karamti, Hadil Shaiba, and Abeer M. Mahmoud
- Subjects
Locality-sensitive hashing ,General Computer Science ,Feature extraction ,Convolutional neural network ,Deep learning ,Electrical and Electronic Engineering ,Image retrieval - Abstract
Efficient methods that enable high and rapid image retrieval are continuously needed, especially with the large mass of images that are generated from different sectors and domains like business, communication media, and entertainment. Recently, deep neural networks are extensively proved higher-performing models compared to other traditional models. Besides, combining hashing methods with a deep learning architecture improves the image retrieval time and accuracy. In this paper, we propose a novel image retrieval method that employs locality-sensitive hashing with convolutional neural networks (CNN) to extract different types of features from different model layers. The aim of this hybrid framework is focusing on both the high-level information that provides semantic content and the low-level information that provides visual content of the images. Hash tables are constructed from the extracted features and trained to achieve fast image retrieval. To verify the effectiveness of the proposed framework, a variety of experiments and computational performance analysis are carried out on the CIFRA-10 and NUS-WIDE datasets. The experimental results show that the proposed method surpasses most existing hash-based image retrieval methods.
- Published
- 2022
33. DNA methylation profile of genes involved in inflammation and autoimmunity correlates with vascular function in morbidly obese adults
- Author
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Francesco Bianco, Mohamed M. Ali, Maryam Qureshi, Chandra Hassan, Antonio Gangemi, Giulianotti P Cristoforo, Patrice Frederick, Dina Naquiallah, Mario Masrur, Mohammed Imaduddin Mirza, Shane A. Phillips, and Abeer M. Mahmoud
- Subjects
0301 basic medicine ,Adult ,Cancer Research ,Brachial Artery ,Inflammation ,Autoimmunity ,Disease ,Biology ,medicine.disease_cause ,Bioinformatics ,03 medical and health sciences ,0302 clinical medicine ,medicine ,Humans ,Epigenetics ,Risk factor ,Molecular Biology ,Gene ,RNA-Binding Proteins ,DNA Methylation ,medicine.disease ,Obesity ,Obesity, Morbid ,030104 developmental biology ,030220 oncology & carcinogenesis ,DNA methylation ,medicine.symptom ,Research Paper - Abstract
Obesity is a major risk factor for cardiovascular disease. Blood-detected epigenetic profiles may serve as non-invasive clinically relevant biomarkers. Therefore, we investigated DNA methylation of genes involved in inflammation in peripheral blood of obese subjects and lean controls and their correlation with cardiometabolic measurements. We obtained blood and adipose tissue (AT) samples from bariatric patients (n = 24) and control adults (n = 24). AT-isolated arterioles were tested for flow-induced dilation (FID) and production of nitric oxide (NO) and reactive oxygen species (ROS). Brachial artery flow-mediated dilation (FMD) was measured via doppler ultrasound. Promoter methylation of 94 genes involved in inflammation and autoimmunity were analysed in whole-blood DNA in relation to vascular function and cardiometabolic risk factors. 77 genes had ahigher methylated fraction in the controls compare obese subjects and 28 proinflammatory genes were significantly hypomethylated in the obese individuals; on top of these genes are CXCL1, CXCL12, CXCL6, IGF2BP2, HDAC4, IL12A, and IL17RA. Fifteen of these genes had significantly higher mRNA in obese subjects compared to controls; on top of these genes are CXCL6, TLR5, IL6ST, EGR1, IL15RA, and HDAC4. Methylation % inversely correlated with BMI, total fat %, visceral fat%, blood pressure, fasting plasma insulin, serum IL6 and C-reactive protein, arteriolar ROS, and alcohol consumption and positive correlations with lean %, HDL, plasma folate and vitamin B12, arteriolar FID and NO production, and brachial FMD. Our results suggest that vascular dysfunction in obese adults may be attributed to asystemic hypomethylation and over expression of the immune-related genes.
- Published
- 2021
34. Abstract 15715: Dna Methylation of Genes Involved in Inflammation Correlates With Cardiometabolic Function in Morbidly Obese Adults
- Author
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Giulianotti P Cristoforo, Mohamed M. Ali, Chandra Hassan, Mario Masrur, Shane A. Phillips, Antonio Gangemi, Abeer M. Mahmoud, Francesco Bianco, and Patrice Frederick
- Subjects
medicine.medical_specialty ,business.industry ,Adipose tissue ,Inflammation ,Disease ,Endocrinology ,Physiology (medical) ,Internal medicine ,DNA methylation ,medicine ,Epigenetics ,medicine.symptom ,Risk factor ,Cardiology and Cardiovascular Medicine ,business ,Gene ,DNA hypomethylation - Abstract
Obesity is a major risk factor for cardiovascular disease. We previously demonstrated impaired vascular function that correlated with global DNA hypomethylation in adipose tissue (AT) isolated from obese adults (OB). Blood-detected epigenetic profiles may serve as non-invasive clinically relevant biomarkers and stand as an unexploited precision medicine reserve. Hypothesis: We hypothesized a contributing role of DNA methylation to systemic inflammation in OB subjects compared to lean controls (CON). We also explored the correlation between these methylation profiles and cardiometabolic measurements. Methods: We obtained blood and AT samples from bariatric patients (n=24; age: 36±7 yrs; BMI: 50.7±8.7 kg/m2) and CON adults (n=24; age: 36±2 yrs; BMI: 25.8±1 kg/m2). AT-isolated arterioles were tested for flow-induced dilation (FID), nitric oxide (NO) and reactive oxygen species (ROS) production. Brachial artery flow-mediated dilation (FMD) was measured via Doppler ultrasound. Promoter methylation of 94 genes involved in inflammation and autoimmunity (EpiTect Methyl II PCR Arrays) were analyzed in whole-blood DNA in relation to vascular function and cardiometabolic risk factors. Results: 70% of genes had a higher methylated fraction in CON compare to only 28% in OB subjects. After correction for multiple testing, 28 genes were significantly hypermethylated in CON compared to OB; on top of these genes are CXCL1, CXCL12, CXCL6, EGR1, HDAC4, IGF2BP2, IL12A, IL12B, and IL17RA. Ten of these genes had significantly higher mRNA in OB compared to CON indicating the functional impact of such signals on gene transcription; on top of these genes are CXCL6, TLR5, IL6ST, IL15RA, and HDAC4. Methylation % of differentially methylated genes inversely correlated with BMI, total fat %, visceral fat%, blood pressure, fasting plasma insulin, serum IL6 and CRP (C-reactive protein), arteriolar ROS, and alcohol consumption and positive correlations with lean %, HDL, plasma folate and vitamin B12, arteriolar FID and NO production, and brachial FMD. Conclusions: Our results suggest that vascular dysfunction in OB adults may be attributed to aberrant DNA methylation. A downstream target for this pathway could reside in endothelial cells resulting in vascular dysfunction
- Published
- 2020
35. 245-LB: Aberrant DNA Methylation as a Contributor to Obesity-Associated Vascular Dysfunction
- Author
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Mario Masrur, Abeer M. Mahmoud, Francesco Bianco, Shane A. Phillips, Mohamed M. Ali, and Chandra Hassan
- Subjects
medicine.medical_specialty ,medicine.diagnostic_test ,business.industry ,Endocrinology, Diabetes and Metabolism ,Leptin ,Adipokine ,Adipose tissue ,Inflammation ,Hypoxia (medical) ,Endocrinology ,medicine.artery ,Internal medicine ,Biopsy ,Internal Medicine ,Medicine ,Interleukin 8 ,medicine.symptom ,Brachial artery ,business - Abstract
Obesity is a major risk factor for cardiovascular disease. We previously demonstrated an impaired vascular function in obese adults (OB). We now hypothesize a role of obesity-associated hypoxia in disturbing the methylation of genes involved in inflammation and vascular dysfunction and propose a mediating role of the hypoxia-inducible factor, HIF1α and the DNA hydroxymethylase, TET1. Methods: We obtained subcutaneous and visceral adipose tissue (AT) biopsies from bariatric patients (n=60; age: 36±7 yrs; BMI: 50.7±8.7 kg/m2) and non-obese (NOB) adults having elective surgeries (n=36; age: 36±2 yrs; BMI: 25.8±1 kg/m2). AT-isolated arterioles were tested for vasoreactivity in response to increasing pressure gradients. Arteriolar nitric oxide (NO) and reactive oxygen species (ROS) were measured. Protein expression of HIF1α and TET1 and promoter methylation/gene expression of leptin, IL1β, IL6, IL8, IL17, CXCL5, TNF-α, and IFNɣ were measured in the AT biopsy. Brachial artery flow-mediated dilation (FMD) was measured via doppler ultrasound. Results: Flow-induced dilation (FID) was 40-50% higher in NOB than OB adults across all pressure gradients (p Conclusion: Our results suggest that vascular dysfunction in OB adults may be attributed to aberrant DNA methylation and increased expression of adipocytokines in the hypoxic AT. A downstream target for this pathway could reside in endothelial cells of nearby arterioles and remote arteries resulting in vascular dysfunction. Disclosure M.M. Ali: None. C. Hassan: None. M. Masrur: None. F. Bianco: Consultant; Self; Intuitive, Medtronic. S.A. Phillips: None. A.M. Mahmoud: None. Funding National Institutes of Health (4R00HL140049, 031K99, HL14004901)
- Published
- 2020
36. The Effect of Low-Carbohydrate Diet on Macrovascular and Microvascular Endothelial Function Is Not Affected by the Provision of Caloric Restriction in Women with Obesity: A Randomized Study
- Author
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Christine Ranieri, Ahmed Elokda, Mary Szczurek, Assem M Ellythy, Abeer M. Mahmoud, Shane A. Phillips, and Chueh-Lung Hwang
- Subjects
obesity ,Calorie ,Brachial Artery ,primary prevention ,030204 cardiovascular system & hematology ,law.invention ,hypocaloric ,chemistry.chemical_compound ,low-carbohydrate diet ,Diet, Carbohydrate-Restricted ,0302 clinical medicine ,conduit artery ,Randomized controlled trial ,law ,women health ,Medicine ,Nutritional Physiological Phenomena ,030212 general & internal medicine ,Brachial artery ,Nutrition and Dietetics ,Blood Circulation ,Female ,lcsh:Nutrition. Foods and food supply ,microvasculature ,Adult ,medicine.medical_specialty ,Biological Availability ,lcsh:TX341-641 ,Nitric Oxide ,Article ,Nitric oxide ,03 medical and health sciences ,medicine.artery ,Internal medicine ,Humans ,isocaloric ,Caloric Restriction ,business.industry ,cardiovascular risks ,Carbohydrate ,medicine.disease ,Obesity ,Dilatation ,Bioavailability ,Endocrinology ,chemistry ,Endothelium, Vascular ,business ,Body mass index ,Food Science - Abstract
Obesity impairs both macro- and microvascular endothelial function due to decreased bioavailability of nitric oxide. Current evidence on the effect of low-carbohydrate (LC) diet on endothelial function is conflicting and confounded by the provision of caloric restriction (CR). We tested the hypothesis that LC without CR diet, but not LC with CR diet, would improve macro- and microvascular endothelial function in women with obesity. Twenty-one healthy women with obesity (age: 33 ±, 2 years, body mass index: 33.0 ±, 0.6 kg/m2, mean ±, SEM) were randomly assigned to receive either a LC diet (~10% carbohydrate calories) with CR (n = 12, 500 calorie/day deficit) or a LC diet without CR (n = 9) and completed the 6-week diet intervention. After the intervention, macrovascular endothelial function, measured as brachial artery flow-mediated dilation did not change (7.3 ±, 0.9% to 8.0 ±, 1.1%, p = 0.7). On the other hand, following the LC diet intervention, regardless of CR, blocking nitric oxide production decreased microvascular endothelial function, measured by arteriolar flow-induced dilation (p &le, 0.02 for both diets) and the magnitude was more than baseline (p &le, 0.04). These data suggest improved NO contributions following the intervention. In conclusion, a 6-week LC diet, regardless of CR, may improve microvascular, but not macrovascular endothelial function, via increasing bioavailability of nitric oxide in women with obesity.
- Published
- 2020
37. Hyperhomocysteinemia and Low Folate and Vitamin B12 Are Associated with Vascular Dysfunction and Impaired Nitric Oxide Sensitivity in Morbidly Obese Patients
- Author
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Mario Masrur, Dina Naquiallah, Patrice Frederick, Francesco Bianco, Antonio Gangemi, Shane A. Phillips, Giulianotti P Cristoforo, Abeer M. Mahmoud, Mohammed Imaduddin Mirza, Smita Jagdish Vinjamuri, Mohamed M. Ali, Mohamed Haloul, Maryam Qureshi, Chandra Hassan, Haloul M, Vinjamuri SJ, Naquiallah D, Mirza MI, Qureshi M, Hassan C, Masrur M, Bianco FM, Frederick P, Cristoforo GP, Gangemi A, Ali MM, Phillips SA, and Mahmoud AM.
- Subjects
Adult ,Male ,Hyperhomocysteinemia ,medicine.medical_specialty ,obesity ,Homocysteine ,Alcohol Drinking ,Brachial Artery ,medicine.medical_treatment ,bariatric surgery ,Adipose tissue ,Nutritional Status ,lcsh:TX341-641 ,Folic Acid Deficiency ,Nitric Oxide ,folate ,Article ,Nitric oxide ,chemistry.chemical_compound ,Folic Acid ,Internal medicine ,medicine.artery ,medicine ,Humans ,Vitamin B12 ,Vascular Diseases ,Brachial artery ,Arteriolar vasodilator ,Nutrition and Dietetics ,business.industry ,Insulin ,Vitamin B 12 Deficiency ,vitamin B12 ,vascular dysfunction ,medicine.disease ,Obesity, Morbid ,Arterioles ,Vitamin B 12 ,Endocrinology ,chemistry ,Female ,business ,lcsh:Nutrition. Foods and food supply ,Food Science ,medicine.drug - Abstract
There is a high prevalence of hyperhomocysteinemia that has been linked to high cardiovascular risk in obese individuals and could be attributed to poor nutritional status of folate and vitamin B12. We sought to examine the association between blood homocysteine (Hcy) folate, and vitamin B12 levels and vascular dysfunction in morbidly obese adults using novel ex vivo flow-induced dilation (FID) measurements of isolated adipose tissue arterioles. Brachial artery flow-mediated dilation (FMD) was also measured. Subcutaneous and visceral adipose tissue biopsies were obtained from morbidly obese individuals and non-obese controls. Resistance arterioles were isolated in which FID, acetylcholine-induced dilation (AChID), and nitric oxide (NO) production were measured in the absence or presence of the NO synthase inhibitor, L-NAME, Hcy, or the superoxide dismutase mimetic, TEMPOL. Our results demonstrated that plasma Hcy concentrations were significantly higher, while folate, vitamin B12, and NO were significantly lower in obese subjects compared to controls. Hcy concentrations correlated positively with BMI, fat %, and insulin levels but not with folate or vitamin B12. Brachial and arteriolar vasodilation were lower in obese subjects, positively correlated with folate and vitamin B12, and inversely correlated with Hcy. Arteriolar NO measurements and sensitivity to L-NAME were lower in obese subjects compared to controls. Finally, Hcy incubation reduced arteriolar FID and NO sensitivity, an effect that was abolished by TEMPOL. In conclusion, these data suggest that high concentrations of plasma Hcy and low concentrations of folate and vitamin B12 could be independent predictors of vascular dysfunction in morbidly obese individuals.
- Published
- 2020
38. Development of an Expert System for Diabetic Type-2 Diet
- Author
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Abeer M. Mahmoud and Ibrahim M. Ahmed
- Subjects
FOS: Computer and information sciences ,Service (systems architecture) ,Computer science ,Computer Science - Artificial Intelligence ,Workload ,medicine.disease ,computer.software_genre ,Knowledge acquisition ,Expert system ,Identification (information) ,Artificial Intelligence (cs.AI) ,Diabetes mellitus ,medicine ,Medical emergency ,Intelligent control ,Visual Prolog ,computer ,Requirements analysis ,computer.programming_language - Abstract
A successful intelligent control of patient food for treatment purpose must combines patient interesting food list and doctors efficient treatment food list. Actually, many rural communities in Sudan have extremely limited access to diabetic diet centers. People travel long distances to clinics or medical facilities, and there is a shortage of medical experts in most of these facilities. This results in slow service, and patients end up waiting long hours without receiving any attention. Hence diabetic diet expert systems can play a significant role in such cases where medical experts are not readily available. This paper presents the design and implementation of an intelligent medical expert system for diabetes diet that intended to be used in Sudan. The development of the proposed expert system went through a number of stages such problem and need identification, requirements analysis, knowledge acquisition, formalization, design and implementation. Visual prolog was used for designing the graphical user interface and the implementation of the system. The proposed expert system is a promising helpful tool that reduces the workload for physicians and provides diabetics with simple and valuable assistance.
- Published
- 2020
39. HIF1α/TET1 Pathway Mediates Hypoxia-Induced Adipocytokine Promoter Hypomethylation in Human Adipocytes
- Author
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Mohamed M. Ali, Abeer M. Mahmoud, and Shane A. Phillips
- Subjects
adipocytes ,Adipose tissue ,Adipokine ,Models, Biological ,Article ,Mixed Function Oxygenases ,03 medical and health sciences ,0302 clinical medicine ,Adipokines ,Downregulation and upregulation ,Proto-Oncogene Proteins ,medicine ,Humans ,DNA (Cytosine-5-)-Methyltransferases ,Epigenetics ,HIF1α ,Promoter Regions, Genetic ,lcsh:QH301-705.5 ,Cells, Cultured ,030304 developmental biology ,0303 health sciences ,DNA methylation ,biology ,epigenetics ,Chemistry ,hypoxia ,Cell Differentiation ,General Medicine ,Hypoxia (medical) ,Hypoxia-Inducible Factor 1, alpha Subunit ,Cell Hypoxia ,TET1 ,3. Good health ,Cell biology ,Gene Expression Regulation ,lcsh:Biology (General) ,Hypoxia-inducible factors ,inflammation ,030220 oncology & carcinogenesis ,adipocytokines ,biology.protein ,Demethylase ,medicine.symptom ,Signal Transduction - Abstract
Obesity is associated with the accumulation of dysfunctional adipose tissue that secretes several pro-inflammatory cytokines (adipocytokines). Recent studies have presented evidence that adipose tissues in obese individuals and animal models are hypoxic, which may result in upregulation and stabilization of the hypoxia inducible factor HIF1&alpha, Epigenetic mechanisms such as DNA methylation enable the body to respond to microenvironmental changes such as hypoxia and may represent a mechanistic link between obesity-associated hypoxia and upregulated inflammatory adipocytokines. The purpose of this study was to investigate the role of hypoxia in modifying adipocytokine DNA methylation and subsequently adipocytokine expression. We suggested that this mechanism is mediated via the DNA demethylase, ten-eleven translocation-1 (TET1), transcription of which has been shown to be induced by HIF1&alpha, To this end, we studied the effect of hypoxia (2% O2) in differentiated subcutaneous human adipocytes in the presence or absence of HIF1&alpha, stabilizer (Dimethyloxalylglycine (DMOG), 500 &mu, M), HIF1&alpha, inhibitor (methyl 3-[[2-[4-(2-adamantyl) phenoxy] acetyl] amino]-4-hydroxybenzoate, 30 &mu, M), or TET1-specific siRNA. Subjecting the adipocytes to hypoxia significantly induced HIF1&alpha, and TET1 protein levels. Moreover, hypoxia induced global hydroxymethylation, reduced adipocytokine DNA promoter methylation, and induced adipocytokine expression. These effects were abolished by either HIF1&alpha, inhibitor or TET1 gene silencing. The major hypoxia-responsive adipocytokines were leptin, interleukin-1 (IL6), IL1&beta, tumor necrosis factor &alpha, (TNF&alpha, ), and interferon &gamma, (IFN&gamma, ). Overall, these data demonstrate an activation of the hydroxymethylation pathway mediated by TET1. This pathway contributes to promoter hypomethylation and gene upregulation of the inflammatory adipocytokines in adipocytes in response to hypoxia.
- Published
- 2020
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40. Cancer testis antigens as immunogenic and oncogenic targets in breast cancer
- Author
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Abeer M. Mahmoud
- Subjects
Male ,0301 basic medicine ,Carcinogenesis ,medicine.medical_treatment ,Immunology ,Breast Neoplasms ,03 medical and health sciences ,0302 clinical medicine ,Immune system ,Breast cancer ,Cancer immunotherapy ,Antigens, Neoplasm ,Testis ,Biomarkers, Tumor ,medicine ,Animals ,Humans ,Immunology and Allergy ,Special Report ,Cancer immunology ,business.industry ,Cancer ,Immunotherapy ,medicine.disease ,030104 developmental biology ,Oncology ,030220 oncology & carcinogenesis ,Cancer cell ,Cancer research ,Cancer/testis antigens ,Female ,business - Abstract
Breast cancer cells frequently express tumor-associated antigens that can elicit immune responses to eradicate cancer. Cancer-testis antigens (CTAs) are a group of tumor-associated antigens that might serve as ideal targets for cancer immunotherapy because of their cancer-restricted expression and robust immunogenicity. Previous clinical studies reported that CTAs are associated with negative hormonal status, aggressive tumor behavior and poor survival. Furthermore, experimental studies have shown the ability of CTAs to induce both cellular and humoral immune responses. They also demonstrated the implication of CTAs in promoting cancer cell growth, inhibiting apoptosis and inducing cancer cell invasion and migration. In the current review, we attempt to address the immunogenic and oncogenic potential of CTAs and their current utilization in therapeutic interventions for breast cancer.
- Published
- 2018
41. Microvascular Vasodilator Plasticity After Acute Exercise
- Author
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Ibra S. Fancher, Shane A. Phillips, Abeer M. Mahmoud, and Austin T. Robinson
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Endothelium ,Physical Therapy, Sports Therapy and Rehabilitation ,Vasodilation ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Nitric oxide ,Microcirculation ,03 medical and health sciences ,No bioavailability ,chemistry.chemical_compound ,0302 clinical medicine ,Internal medicine ,medicine ,Orthopedics and Sports Medicine ,Endothelial dysfunction ,Exercise physiology ,business.industry ,medicine.disease ,030104 developmental biology ,medicine.anatomical_structure ,chemistry ,Cardiology ,business ,Oxidative stress - Abstract
Endothelium-dependent vasodilation is reduced after acute exercise or after high intraluminal pressure in isolated arterioles from sedentary adults but not in arterioles from regular exercisers. The preserved vasodilation in arterioles from exercisers is hydrogen peroxide (H2O2) dependent, whereas resting dilation is nitric oxide (NO) dependent. We hypothesize chronic exercise elicits adaptations allowing for maintained vasodilation when NO bioavailability is reduced.
- Published
- 2018
42. DiaMe: IoMT deep predictive model based on threshold aware region growing technique
- Author
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Safia Abbas and Abeer M. Mahmoud
- Subjects
Contouring ,General Computer Science ,Computer science ,business.industry ,Deep learning ,Pattern recognition ,Convolutional neural network ,Edge detection ,Region growing segmentation ,Region of interest ,Region growing ,Brain tumor diagnose ,Segmentation ,Sensitivity (control systems) ,Artificial intelligence ,Electrical and Electronic Engineering ,business ,IoMT medical service ,CNN - Abstract
Medical images magnetic resonance imaging (MRI) analysis is a very challenging domain especially in the segmentation process for predicting tumefactions with high accuracy. Although deep learning techniques achieve remarkable success in classification and segmentation phases, it remains a rich area to investigate, due to the variance of tumefactions sizes, locations and shapes. Moreover, the high fusion between tumors and their anatomical appearance causes an imprecise detection for tumor boundaries. So, using hybrid segmentation technique will strengthen the reliability and generality of the diagnostic model. This paper presents an automated hybrid segmentation approach combined with convolution neural network (CNN) model for brain tumor detection and prediction, as one of many offered functions by the previously introduced IoMT medical service “DiaMe”. The developed model aims to improve extracting region of interest (ROI), especially with the variation sizes of tumor and its locations; and hence improve the overall performance of detecting the tumor. The MRI brain tumor dataset obtained from Kaggle, where all needed augmentation, edge detection, contouring and binarization are presented. The results showed 97.32% accuracy for detection, 96.5% Sensitivity, and 94.8% for specificity.
- Published
- 2021
43. Knowledge Acquisition for an Expert System for Diabetic Type-2 Diet
- Author
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Ibrahim M. Ahmed, Abdel-Badeeh M. Salem, and Abeer M. Mahmoud
- Subjects
Type (biology) ,Knowledge management ,Computer science ,business.industry ,computer.software_genre ,business ,Knowledge acquisition ,computer ,Expert system - Published
- 2017
44. Short-term regular aerobic exercise reduces oxidative stress produced by acute high intraluminal pressure in the adipose microvasculature
- Author
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Ibra S. Fancher, Austin T. Robinson, Michael D. Brown, Masuko Ushio-Fukai, Jing Tan Bian, Marc D. Cook, Shane A. Phillips, Abeer M. Mahmoud, Mohamed M. Ali, Tohru Fukai, and Varadarajan Sudhahar
- Subjects
0301 basic medicine ,medicine.medical_specialty ,Endothelium ,Physiology ,business.industry ,Adipose tissue ,030204 cardiovascular system & hematology ,medicine.disease_cause ,Surgery ,Microcirculation ,03 medical and health sciences ,030104 developmental biology ,0302 clinical medicine ,medicine.anatomical_structure ,Endocrinology ,Physiology (medical) ,Internal medicine ,medicine ,Aerobic exercise ,Cardiology and Cardiovascular Medicine ,business ,Oxidative stress - Abstract
High blood pressure has been shown to elicit impaired dilation in the vasculature. The purpose of this investigation was to elucidate the mechanisms through which high pressure may elicit vascular dysfunction and determine the mechanisms through which regular aerobic exercise protects arteries against high pressure. Male C57BL/6J mice were subjected to 2 wk of voluntary running (~6 km/day) for comparison with sedentary controls. Hindlimb adipose resistance arteries were dissected from mice for measurements of flow-induced dilation (FID; with or without high intraluminal pressure exposure) or protein expression of NADPH oxidase II (NOX II) and superoxide dismutase (SOD). Microvascular endothelial cells were subjected to high physiological laminar shear stress (20 dyn/cm2) or static condition and treated with ANG II + pharmacological inhibitors. Cells were analyzed for the detection of ROS or collected for Western blot determination of NOX II and SOD. Resistance arteries from exercised mice demonstrated preserved FID after high pressure exposure, whereas FID was impaired in control mouse arteries. Inhibition of ANG II or NOX II restored impaired FID in control mouse arteries. High pressure increased superoxide levels in control mouse arteries but not in exercise mouse arteries, which exhibited greater ability to convert superoxide to H2O2. Arteries from exercised mice exhibited less NOX II protein expression, more SOD isoform expression, and less sensitivity to ANG II. Endothelial cells subjected to laminar shear stress exhibited less NOX II subunit expression. In conclusion, aerobic exercise prevents high pressure-induced vascular dysfunction through an improved redox environment in the adipose microvasculature. NEW & NOTEWORTHY We describe potential mechanisms contributing to aerobic exercise-conferred protection against high intravascular pressure. Subcutaneous adipose microvessels from exercise mice express less NADPH oxidase (NOX) II and more superoxide dismutase (SOD) and demonstrate less sensitivity to ANG II. In microvascular endothelial cells, shear stress reduced NOX II but did not influence SOD expression. Listen to this article’s corresponding podcast at https://ajpheart.podbean.com/e/exercise-averts-high-pressure-induced-vascular-dysfunction/ .
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- 2017
45. Vitamin D Improves Nitric Oxide-Dependent Vasodilation in Adipose Tissue Arterioles from Bariatric Surgery Patients
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Chandra Hassan, Antonio Gangemi, Mario Masrur, Abeer M. Mahmoud, Shane A. Phillips, and Mary Szczurek
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Vitamin ,Adult ,Male ,medicine.medical_specialty ,obesity ,bariatric surgery ,Adipose tissue ,030209 endocrinology & metabolism ,Vasodilation ,lcsh:TX341-641 ,vitamin D ,030204 cardiovascular system & hematology ,Article ,Nitric oxide ,Tissue Culture Techniques ,03 medical and health sciences ,chemistry.chemical_compound ,Young Adult ,0302 clinical medicine ,Weight loss ,nitric oxide ,medicine ,Vitamin D and neurology ,Humans ,Arteriolar vasodilator ,Nutrition and Dietetics ,business.industry ,Hydrogen Peroxide ,Middle Aged ,Pathophysiology ,Acetylcholine ,3. Good health ,Surgery ,Arterioles ,chemistry ,Adipose Tissue ,Female ,medicine.symptom ,microvascular ,weight loss ,business ,lcsh:Nutrition. Foods and food supply ,Food Science ,medicine.drug - Abstract
There is a high prevalence of vitamin-D deficiency in obese individuals that could be attributed to vitamin-D sequestration in the adipose tissue. Associations between vitamin-D deficiency and unfavorable cardiometabolic outcomes were reported. However, the pathophysiological mechanisms behind these associations are yet to be established. In our previous studies, we demonstrated microvascular dysfunction in obese adults that was associated with reduced nitric oxide (NO) production. Herein, we examined the role of vitamin D in mitigating microvascular function in morbidly obese adults before and after weight loss surgery. We obtained subcutaneous (SAT) and visceral adipose tissue (VAT) biopsies from bariatric patients at the time of surgery (n = 15) and gluteal SAT samples three months post-surgery (n = 8). Flow-induced dilation (FID) and acetylcholine-induced dilation (AChID) and NO production were measured in the AT-isolated arterioles ±, NO synthase inhibitor N(&omega, )-nitro-L-arginine methyl ester (L-NAME), hydrogen peroxide (H2O2) inhibitor, polyethylene glycol-modified catalase (PEG-CAT), or 1,25-dihydroxyvitamin D. Vitamin D improved FID, AChID, and NO production in AT-isolated arterioles at time of surgery, these effects were abolished by L-NAME but not by PEG-CAT. Vitamin-D-mediated improvements were of a higher magnitude in VAT compared to SAT arterioles. After surgery, significant improvements in FID, AChID, NO production, and NO sensitivity were observed. Vitamin-D-induced changes were of a lower magnitude compared to those from the time of surgery. In conclusion, vitamin D improved NO-dependent arteriolar vasodilation in obese adults, this effect was more significant before surgery-induced weight loss.
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- 2019
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46. Low-Fat Diet Designed for Weight Loss But Not Weight Maintenance Improves Nitric Oxide-Dependent Arteriolar Vasodilation in Obese Adults
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Mary Szczurek, Abeer M. Mahmoud, Christine Ranieri, Jing-Tan Bian, Chueh-Lung Hwang, Shane A. Phillips, and David D. Gutterman
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Male ,obesity ,Vasodilation ,030204 cardiovascular system & hematology ,flow-induced dilation ,Body Weight Maintenance ,hypocaloric ,chemistry.chemical_compound ,0302 clinical medicine ,Weight loss ,Medicine ,Diet, Fat-Restricted ,Arteriolar vasodilator ,Nutrition and Dietetics ,cardiovascular ,Middle Aged ,Low fat diet ,3. Good health ,Female ,medicine.symptom ,lcsh:Nutrition. Foods and food supply ,Acetylcholine ,medicine.drug ,microvasculature ,Adult ,medicine.medical_specialty ,Adolescent ,Subcutaneous Fat ,030209 endocrinology & metabolism ,lcsh:TX341-641 ,Nitric Oxide ,low-fat diet ,Article ,Nitric oxide ,03 medical and health sciences ,Young Adult ,Internal medicine ,Weight maintenance ,Weight Loss ,Humans ,isocaloric ,business.industry ,medicine.disease ,Obesity ,acetylcholine ,Endocrinology ,chemistry ,Microvessels ,business ,Food Science - Abstract
Obesity is associated with microvascular dysfunction. While low-fat diet improves cardiovascular risk, its contributions on microvascular function, independent of weight loss, is unknown. We tested the hypothesis that nitric oxide (NO)-dependent vasodilation in microvessels is improved by low-fat diets designed for weight loss (LFWL) compared to low-fat weight maintenance (LFWM) diet. Obese adults were randomly assigned to either a LFWL diet (n = 11) or LFWM diet (n = 10) for six weeks. Microvessels were obtained from gluteal subcutaneous fat biopsies before and after the intervention for vascular reactivity measurements to acetylcholine (Ach) and flow, with and without L-NAME or indomethacin. Vascular and serum NO and C-reactive protein (CRP) were also measured. LFWL diet increased flow-induced (FID) and ACh-induced dilation (AChID), an effect that was inhibited by L-NAME. Conversely, LFWM diet did not affect FID or AChID. Indomethacin improved FID and AChID in the baseline and this effect was minimized in response to both diets. Serum NO or CRP did not change in response to either diet. In conclusion, LFWL diet improves microvascular reactivity compared to LFWM diet and increased vascular NO contribution to the improved microvascular dilation. These data suggest that weight reduction on low fat diet is critical for microvascular health.
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- 2019
47. Precision Medicine in Weight Loss and Healthy Living
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Abeer M. Mahmoud, Richard Severin, Ahmad Sabbahi, Ross Arena, and Shane A. Phillips
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Gerontology ,medicine.medical_specialty ,Health Knowledge, Attitudes, Practice ,Time Factors ,Health Status ,Health Behavior ,Bariatric Surgery ,Context (language use) ,Disease ,Health Promotion ,030204 cardiovascular system & hematology ,Article ,03 medical and health sciences ,Indirect costs ,0302 clinical medicine ,Patient Education as Topic ,Weight loss ,Risk Factors ,Diabetes mellitus ,Patient-Centered Care ,Weight Loss ,medicine ,Humans ,Genetic Predisposition to Disease ,030212 general & internal medicine ,Healthy Lifestyle ,Obesity ,Exercise ,business.industry ,Public health ,Protective Factors ,medicine.disease ,Precision medicine ,Phenotype ,Anti-Obesity Agents ,medicine.symptom ,Sedentary Behavior ,Cardiology and Cardiovascular Medicine ,business ,Risk Reduction Behavior - Abstract
Obesity affects 600 million people globally and over one third of the American population. Along with associated comorbidities, including cardiovascular disease, stroke, diabetes, and cancer; the direct and indirect costs of managing obesity are 21% of the total medical costs. These factors shed light on why developing effective and pragmatic strategies to reduce body weight in obese individuals is a major public health concern. An estimated 60–70% of obese Americans attempt to lose weight each year, with only a small minority able to achieve and maintain long term weight loss. To address this issue a precision medicine approach for weight loss has been considered, which places an emphasis on sustainability and real-world application to individualized therapy. In this article we review weight loss interventions in the context of precision medicine and discuss the role of genetic and epigenetic factors, pharmacological interventions, lifestyle interventions, and bariatric surgery on weight loss.
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- 2018
48. Genetic Variation and Immunohistochemical Localization of the Glucocorticoid Receptor in Breast Cancer Cases from the Breast Cancer Care in Chicago Cohort
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Rick A. Kittles, Abeer M. Mahmoud, Ken Batai, Garth H. Rauscher, Ebony Shah-Williams, Umaima Al-Alem, and Peter H. Gann
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0301 basic medicine ,Cancer Research ,Estrogen receptor ,Single-nucleotide polymorphism ,Article ,progesterone receptor ,cytokeratin 5/6 ,03 medical and health sciences ,Cytokeratin ,breast cancer ,0302 clinical medicine ,Glucocorticoid receptor ,Breast cancer ,single nucleotide polymorphism ,Progesterone receptor ,glucocorticoid receptor ,Medicine ,skin and connective tissue diseases ,psychological stress ,hormonal receptor ,RC254-282 ,molecular subtypes ,tissue microarrays ,Tissue microarray ,business.industry ,Myoepithelial cell ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,multispectral digital imaging ,medicine.disease ,genetic ancestry ,030104 developmental biology ,Oncology ,immunohistochemical localization ,030220 oncology & carcinogenesis ,Cancer research ,basal-like breast cancer ,business ,estrogen receptor - Abstract
Simple Summary Breast cancer, one of the leading causes of death among women, is a complex disease in which several factors, such as psychosocial stress, have been implicated in its initiation and progression. The glucocorticoid receptor (GCR) is one of the molecules that transfers the stress signal into the body. We measured the genetic variation and protein expression of GCR and the genes that regulate GCR function or response and examined whether these variations were associated with breast cancer. We found several genetic variants of functionally important SNPs associated with later disease stage, higher grade, and hormone receptor-negative status. The GCR protein expression was reduced in breast cancer tissue and correlated with the basal cell marker CK5/6. Abstract Background: Glucocorticoid, one of the primary mediators of stress, acts via its receptor, the glucocorticoid receptor (GCR/NR3C1), to regulate a myriad of physiological processes. We measured the genetic variation and protein expression of GCR, and the genes that regulate GCR function or response and examined whether these alterations were associated with breast cancer clinicopathological characteristics. Method: We used samples from a multiracial cohort of breast cancer patients to assess the association between breast cancer characteristics and the genetic variants of single nucleotide polymorphisms (SNPs) in GCR/NR3C1, FKBP5, Sgk1, IL-6, ADIPOQ, LEPR, SOD2, CAT, and BCL2. Results: Several SNPs were associated with breast cancer characteristics, but statistical significance was lost after adjustment for multiple comparisons. GCR was detected in all normal breast tissues and was predominantly located in the nuclei of the myoepithelial cell layer, whereas the luminal layer was negative for GCR. GCR expression was significantly decreased in all breast cancer tissue types, compared to nontumor tissue, but was not associated with breast cancer characteristics. We found that high nuclear GCR expression was associated with basal cell marker cytokeratin 5/6 positivity. Conclusion: GCR expression is reduced in breast cancer tissue and correlates with the basal cell marker CK5/6.
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- 2021
49. Classifying a type of brain disorder in children: an effective fMRI based deep attempt
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Hanen Karamti and Abeer M. Mahmoud
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0301 basic medicine ,Control and Optimization ,Computer Networks and Communications ,Computer science ,Boltzmann machine ,Machine learning ,computer.software_genre ,Regularization (mathematics) ,Restricted boltzmann machine ,03 medical and health sciences ,0302 clinical medicine ,Discriminative model ,Robustness (computer science) ,medicine ,Electrical and Electronic Engineering ,Set (psychology) ,Restricted Boltzmann machine ,Artificial neural network ,business.industry ,Deep learning ,Autoencoder ,medicine.disease ,030104 developmental biology ,Hardware and Architecture ,Signal Processing ,Autism ,Artificial intelligence ,business ,computer ,Deep framework ,030217 neurology & neurosurgery ,Information Systems - Abstract
Recent advanced intelligent learning approaches that are based on using neural networks in medical diagnosing increased researcher expectations. In fact, the literature proved a straight-line relation of the exact needs and the achieved results. Accordingly, it encouraged promising directions of applying these approaches toward saving time and efforts. This paper proposes a novel hybrid deep learning framework that is based on the restricted boltzmann machines (RBM) and the contractive autoencoder (CA) to classify the brain disorder and healthy control cases in children less than 12 years. The RBM focuses on obtaining the discriminative set of high guided features in the classification process, while the CA provides the regularization and the robustness of features for optimal objectives. The proposed framework diagnosed children with autism recording accuracy of 91, 14% and proved enhancement compared to literature.
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- 2021
50. Abstract C098: Racial disparity in the prevalence of BCL-2 expression and associations with breast cancer survival in the Breast Cancer Care in Chicago study
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Jibril M. Alim, Abeer M. Mahmoud, Virgilia Macias, Kent Hoskins, Andre Kadjascy-Balla, and Garth H. Rauscher
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Oncology ,medicine.medical_specialty ,Breast cancer ,Expression (architecture) ,Racial disparity ,Epidemiology ,business.industry ,Internal medicine ,medicine ,medicine.disease ,business - Abstract
Background: BCL-2 is an antiapoptotic protein that regulates apoptosis and has been associated with poor prognosis for many cancer sites. Despite a function that encourages tumorigenesis, increased BCL-2 expression has been associated with improved clinical outcomes in ER+ breast cancers, with mixed results observed for ER/PR- cancers. BCL-2 has been hypothesized to be an indicator of intact and fully functioning hormone receptor pathways and has also been hypothesized to facilitate cell death after treatment through mitochondrial priming. BCL-2 expression correlates strongly with hormone receptor expression; therefore, its association with better prognosis may be due to the strong effect ER/PR status has on survival, or due to its own biologic mechanism. To date, no studies have been conducted on racial differences in BCL-2 expression. We characterized racial/ethnic differences in BCL-2 expression and the association of BCL-2 expression with breast cancer specific survival among participants in the Breast Cancer Care in Chicago Study (BCCC). Methods: The BCCC was a cross-sectional study of 989 recently diagnosed non-Latina (nL) White, nL Black and Latina breast cancer patients diagnosed with a first primary breast cancer aged 30-79 in Chicago from 2005-2008. Tumor tissue was available for BCL-2 immunohistochemical staining for 264 patients. BCL-2 staining scores of 0 were classified as negative and all positive scores (1D, 1H, 2D, 2H, and 3) were classified as positive. Cox proportional hazards models were conducted to estimate the association of BCL-2 expression with breast cancer-specific death. Results: Roughly three-fourths of tumors (77%) stained positive for BCL. The prevalence of positive BCL staining varied by race/ethnicity (p=0.007), being highest for nL Whites (87%) and lowest for nL Blacks (68%); variability in BCL staining appeared to be limited to ER/PR-negative tumors (N=53), for which prevalence of positive BCL staining appeared to be much higher for nL whites than for minority patients (44% vs. 16%, p=0.054). BCL-2 expression was associated with a strong protective effect on BC survival in age and race-adjusted models (HR=0.40, 95% CI: 0.19, 0.84) and BCL-2 expression remained strongly positively associated with protection from breast cancer death with additional adjustment for ER/PR status (HR=0.33, 95% CI: 0.12, 0.89). Within subgroups defined by ER/PR status, BCL2 expression was qualitatively associated with better survival for both ER/PR positive and ER/PR negative subtypes, although sample size was insufficient to conduct a formal stratified analysis. Conclusions: BCL-2 appears to be an independent predictor of improved prognosis for breast cancer even after controlling for ER/PR status. The apparently higher prevalence of BCL2 expression for nL White vs. nL Black patients may provide etiologic clues regarding disparities in BC survival. Citation Format: Jibril M. Alim, Kent Hoskins, Abeer M. Mahmoud, Virgilia Macias, Andre Kadjascy-Balla, Garth H. Rauscher. Racial disparity in the prevalence of BCL-2 expression and associations with breast cancer survival in the Breast Cancer Care in Chicago study [abstract]. In: Proceedings of the Eleventh AACR Conference on the Science of Cancer Health Disparities in Racial/Ethnic Minorities and the Medically Underserved; 2018 Nov 2-5; New Orleans, LA. Philadelphia (PA): AACR; Cancer Epidemiol Biomarkers Prev 2020;29(6 Suppl):Abstract nr C098.
- Published
- 2020
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