128 results on '"AI, Artificial intelligence"'
Search Results
2. Ventricular Changes in Patients with Acute COVID-19 Infection: Follow-up of the World Alliance Societies of Echocardiography (WASE-COVID) Study
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Ilya Karagodin, Cristiane Carvalho Singulane, Tine Descamps, Gary M. Woodward, Mingxing Xie, Edwin S. Tucay, Rizwan Sarwar, Zuilma Y. Vasquez-Ortiz, Azin Alizadehasl, Mark J. Monaghan, Bayardo A. Ordonez Salazar, Laurie Soulat-Dufour, Atoosa Mostafavi, Antonella Moreo, Rodolfo Citro, Akhil Narang, Chun Wu, Karima Addetia, Ana C. Tude Rodrigues, Roberto M. Lang, Federico M. Asch, Vince Ryan V. Munoz, Rafael Porto De Marchi, Sergio M. Alday-Ramirez, Consuelo Orihuela, Anita Sadeghpour, Jonathan Breeze, Amy Hoare, Carlos Ixcanparij Rosales, Ariel Cohen, Martina Milani, Ilaria Trolese, Oriana Belli, Benedetta De Chiara, Michele Bellino, Giuseppe Iuliano, Yun Yang, and Investigators, WASE-COVID
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LDH, lactic dehydrogenase ,Longitudinal strain ,TTE, transthoracic echocardiogram ,WASE, World Alliance Societies of Echocardiography ,Right Ventricular Function ,Ventricular Function, Left ,Strain ,Free wall ,Basal (phylogenetics) ,ASE, American Society of Echocardiography ,PCR, polymerase chain reaction ,LVEF, left ventricular ejection fraction ,WASE ,BNP, brain natriuretic peptide ,COVID-19, Coronavirus disease 2019 ,Ejection fraction ,RVFWS, right ventricular free-wall strain ,ICU, intensive care unit ,Echocardiography ,Cohort ,CRP, C-reactive protein ,Cardiology ,AI, artificial intelligence ,RV, right ventricular ,Cardiology and Cardiovascular Medicine ,2CH, 2-chamber ,medicine.medical_specialty ,4CH, 4-chamber ,Coronavirus disease 2019 (COVID-19) ,LVEDV, left ventricular end-diastolic volume ,Heart Ventricles ,Clinical Investigations ,Left Ventricular Function ,Internal medicine ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,LV, left ventricular ,RVGLS, right ventricular global longitudinal strain ,RVBD, right ventricle basal diameter ,SARS-CoV-2 ,business.industry ,COVID-19 ,Stroke Volume ,MICE, Multiple Imputations by Chained Equations ,EACVI, European Association of Cardiovascular Imaging ,LVLS, left ventricular longitudinal strain ,Ventricular Function, Right ,LVESV, left ventricular end-systolic volume ,Transthoracic echocardiogram ,business ,SARS-CoV-2, severe acute respiratory syndrome coronavirus-2 ,Follow-Up Studies - Abstract
Background COVID-19 infection is known to cause a wide array of clinical chronic sequelae, but little is known regarding the long-term cardiac complications. We aim to report echocardiographic follow-up findings and describe the changes in left (LV) and right ventricular (RV) function that occur following acute infection. Methods Patients enrolled in the World Alliance Societies of Echocardiography-COVID study with acute COVID-19 infection were asked to return for a follow-up transthoracic echocardiogram. Overall, 198 returned at a mean of 129 days of follow-up, of which 153 had paired baseline and follow-up images that were analyzable, including LV volumes, ejection fraction (LVEF), and longitudinal strain (LVLS). Right-sided echocardiographic parameters included RV global longitudinal strain, RV free wall strain, and RV basal diameter. Paired echocardiographic parameters at baseline and follow-up were compared for the entire cohort and for subgroups based on the baseline LV and RV function. Results For the entire cohort, echocardiographic markers of LV and RV function at follow-up were not significantly different from baseline (all P > .05). Patients with hyperdynamic LVEF at baseline (>70%), had a significant reduction of LVEF at follow-up (74.3% ± 3.1% vs 64.4% ± 8.1%, P < .001), while patients with reduced LVEF at baseline (−20%) at baseline had significant improvement at follow-up (−15.2% ± 3.4% vs −17.4% ± 4.9%, P = .004). Patients with abnormal RV basal diameter (>4.5 cm) at baseline had significant improvement at follow-up (4.9 ± 0.7 cm vs 4.6 ± 0.6 cm, P = .019). Conclusions Overall, there were no significant changes over time in the LV and RV function of patients recovering from COVID-19 infection. However, differences were observed according to baseline LV and RV function, which may reflect recovery from the acute myocardial injury occurring in the acutely ill. Left ventricular and RV function tends to improve in those with impaired baseline function, while it tends to decrease in those with hyperdynamic LV or normal RV function.
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- 2022
3. Medications and Patient Factors Associated With Increased Readmission for Alcohol-Related Diagnoses
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Joseph C. Osborne, Susan E. Horsman, Kristin C. Mara, Thomas C. Kingsley, Robert W. Kirchoff, and Jonathan G. Leung
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Medicine (General) ,R5-920 ,AUD, alcohol use disorder ,AWS, alcohol withdrawal syndrome ,CCI, Charlson comorbidity index ,BMI, body mass index ,Original Article ,AI, artificial intelligence ,CIWA, clinical institute withdrawal assessment ,LOS, length of stay - Abstract
Objective: To investigate medication factors and patient characteristics associated with readmissions following alcohol-related hospitalizations. Patients and Methods: Adult patients admitted from September 1, 2016, through August 31, 2019, who had an alcohol-related hospitalization were identified through electronic health records. Patient characteristics and medications of interest administered during hospitalization or prescribed at discharge were identified. Medications of interest included US Food and Drug Administration–approved medications for alcohol use disorder, benzodiazepines, barbiturates, gabapentin, opioids, and muscle relaxants. The primary outcome was to identify medications and patient factors associated with 30-day alcohol-related readmission. Secondary outcomes included medications and patient characteristics associated with multiple alcohol-related readmissions within a year from the index admission (ie, two or more readmissions) and factors associated with 30-day all-cause readmission. Results: Characteristics of the 932 patients included in this study associated with a 30-day alcohol-related readmission included younger age, severity of alcohol withdrawal, history of psychiatric disorder, marital status, and the number of prior alcohol-related admission in the previous year. Benzodiazepine or barbiturate use during hospitalization or upon discharge was associated with 30-day alcohol-related readmission (P=.006). Gabapentin administration during hospitalization or upon discharge was not associated with 30-day alcohol-related readmission (P=.079). Conclusion: The findings reinforce current literature identifying patient-specific factors associated with 30-day readmissions. Gabapentin use was not associated with readmissions; however, there was an association with benzodiazepine/barbiturate use.
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- 2021
4. Applying artificial intelligence for cancer immunotherapy
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Xiang Wang, Zhicheng Gong, Yuanliang Yan, Xinxin Ren, Shuangshuang Zeng, and Zhijie Xu
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Risk analysis ,Artificial intelligence ,CTLA-4, cytotoxic T lymphocyte-associated antigen 4 ,Computer science ,medicine.medical_treatment ,Diagnostic accuracy ,Cancer immunotherapy ,Review ,MMR, mismatch repair ,RM1-950 ,MHC-I, major histocompatibility complex class I ,TNBC, triple-negative breast cancer ,PD-1, programmed cell death protein 1 ,03 medical and health sciences ,0302 clinical medicine ,Machine learning ,medicine ,ICB, immune checkpoint blockade ,ML, machine learning ,General Pharmacology, Toxicology and Pharmaceutics ,Diagnostics ,030304 developmental biology ,0303 health sciences ,DL, deep learning ,US, ultrasonography ,business.industry ,CT, computed tomography ,irAEs, immune-related adverse events ,ComputingMethodologies_PATTERNRECOGNITION ,Software deployment ,030220 oncology & carcinogenesis ,AI, artificial intelligence ,Health information ,Therapeutics. Pharmacology ,PD-L1, PD-1 ligand1 ,business ,MRI, magnetic resonance imaging - Abstract
Artificial intelligence (AI) is a general term that refers to the use of a machine to imitate intelligent behavior for performing complex tasks with minimal human intervention, such as machine learning; this technology is revolutionizing and reshaping medicine. AI has considerable potential to perfect health-care systems in areas such as diagnostics, risk analysis, health information administration, lifestyle supervision, and virtual health assistance. In terms of immunotherapy, AI has been applied to the prediction of immunotherapy responses based on immune signatures, medical imaging and histological analysis. These features could also be highly useful in the management of cancer immunotherapy given their ever-increasing performance in improving diagnostic accuracy, optimizing treatment planning, predicting outcomes of care and reducing human resource costs. In this review, we present the details of AI and the current progression and state of the art in employing AI for cancer immunotherapy. Furthermore, we discuss the challenges, opportunities and corresponding strategies in applying the technology for widespread clinical deployment. Finally, we summarize the impact of AI on cancer immunotherapy and provide our perspectives about underlying applications of AI in the future., Graphical abstract With the increasing of clinical data and advanced AI methodologies, AI-based technologies have the potential to increase the functional roles in cancer immunotherapy response.Image 1
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- 2021
5. Echocardiographic Correlates of In-Hospital Death in Patients with Acute COVID-19 Infection: The World Alliance Societies of Echocardiography (WASE-COVID) Study
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Ilya Karagodin, Cristiane Carvalho Singulane, Gary M. Woodward, Mingxing Xie, Edwin S. Tucay, Ana C. Tude Rodrigues, Zuilma Y. Vasquez-Ortiz, Azin Alizadehasl, Mark J. Monaghan, Bayardo A. Ordonez Salazar, Laurie Soulat-Dufour, Atoosa Mostafavi, Antonella Moreo, Rodolfo Citro, Akhil Narang, Chun Wu, Tine Descamps, Karima Addetia, Roberto M. Lang, Federico M. Asch, Vince Ryan V. Munoz, Rafael Porto De Marchi, Sergio M. Alday-Ramirez, Consuelo Orihuela, Anita Sadeghpour, Jonathan Breeze, Amy Hoare, Carlos Ixcanparij Rosales, Ariel Cohen, Martina Milani, Ilaria Trolese, Oriana Belli, Benedetta De Chiara, Michele Bellino, and Giuseppe Iuliano
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Multivariate analysis ,WASE, World Alliance Societies of Echocardiography ,Disease ,Q1, Quartile 1 ,030204 cardiovascular system & hematology ,RV, Right ventricular, ventricle ,Strain ,2CH, Two-chamber ,030218 nuclear medicine & medical imaging ,ULN, Upper limit of normal ,FWS, Free-wall strain ,Basal (phylogenetics) ,ASE, American Society of Echocardiography ,SARS-CoV-2, Severe acute respiratory syndrome coronavirus-2 ,0302 clinical medicine ,BNP, Brain natriuretic peptide ,LVEDV, Left ventricular end-diastolic volume ,WASE ,COVID-19, Coronavirus disease 2019 ,Ejection fraction ,LVLS, Left ventricular longitudinal strain ,ICU, Intensive care unit ,Echocardiography ,EF, Ejection fraction ,International ,Q3, Quartile 3 ,CRP, C-reactive protein ,Cardiology ,LV, Left ventricular ,Cardiology and Cardiovascular Medicine ,medicine.medical_specialty ,4CH, Four-chamber ,LVESV, Left ventricular end-systolic volume ,Coronavirus disease 2019 (COVID-19) ,LS, Longitudinal strain ,Clinical Investigations ,TTE, Transthoracic echocardiogram ,03 medical and health sciences ,MICE, Multiple imputations by chained equations ,Internal medicine ,Severity of illness ,medicine ,Radiology, Nuclear Medicine and imaging ,In patient ,Mortality ,business.industry ,AI, Artificial intelligence ,COVID-19 ,RVBD, Right ventricular basal diameter ,Odds ratio ,AUC, Area under the curve ,EACVI, European Association of Cardiovascular Imaging ,LVEF, Left ventricular ejection fraction ,ROC, Receiver-operating characteristic ,RVLS, Right ventricular longitudinal strain ,LDH, Lactic dehydrogenase ,ACC, American College of Cardiology ,business ,RVFWS, Right ventricular free-wall strain ,OR, Odds ratio - Abstract
Background The novel severe acute respiratory syndrome coronavirus-2 virus, which has led to the global coronavirus disease-2019 (COVID-19) pandemic is known to adversely affect the cardiovascular system through multiple mechanisms. In this international, multicenter study conducted by the World Alliance Societies of Echocardiography, we aim to determine the clinical and echocardiographic phenotype of acute cardiac disease in COVID-19 patients, to explore phenotypic differences in different geographic regions across the world, and to identify parameters associated with in-hospital mortality. Methods We studied 870 patients with acute COVID-19 infection from 13 medical centers in four world regions (Asia, Europe, United States, Latin America) who had undergone transthoracic echocardiograms. Clinical and laboratory data were collected, including patient outcomes. Anonymized echocardiograms were analyzed with automated, machine learning–derived algorithms to calculate left ventricular (LV) volumes, ejection fraction, and LV longitudinal strain (LS). Right-sided echocardiographic parameters that were measured included right ventricular (RV) LS, RV free-wall strain (FWS), and RV basal diameter. Multivariate regression analysis was performed to identify clinical and echocardiographic parameters associated with in-hospital mortality. Results Significant regional differences were noted in terms of patient comorbidities, severity of illness, clinical biomarkers, and LV and RV echocardiographic metrics. Overall in-hospital mortality was 21.6%. Parameters associated with mortality in a multivariate analysis were age (odds ratio [OR] = 1.12 [1.05, 1.22], P = .003), previous lung disease (OR = 7.32 [1.56, 42.2], P = .015), LVLS (OR = 1.18 [1.05, 1.36], P = .012), lactic dehydrogenase (OR = 6.17 [1.74, 28.7], P = .009), and RVFWS (OR = 1.14 [1.04, 1.26], P = .007). Conclusions Left ventricular dysfunction is noted in approximately 20% and RV dysfunction in approximately 30% of patients with acute COVID-19 illness and portend a poor prognosis. Age at presentation, previous lung disease, lactic dehydrogenase, LVLS, and RVFWS were independently associated with in-hospital mortality. Regional differences in cardiac phenotype highlight the significant differences in patient acuity as well as echocardiographic utilization in different parts of the world.
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- 2021
6. Quantitative Analysis of OCT for Neovascular Age-Related Macular Degeneration Using Deep Learning
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Siegfried K Wagner, Praveen J Patel, Dun Jack Fu, Gabriella Moraes, Terry Spitz, Christopher Kelly, Reena Chopra, Pearse A. Keane, Edward Korot, Livia Faes, Tiarnan D L Keenan, Hagar Khalid, Konstantinos Balaskas, Daniel Ferraz, and Marc Wilson
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Male ,Visual acuity ,genetic structures ,Visual Acuity ,SRF, subretinal fluid ,Retinal Pigment Epithelium ,0302 clinical medicine ,SHRM, subretinal hyperreflective material ,AMD, age-related macular degeneration ,NSR, neurosensory retina ,Aged, 80 and over ,0303 health sciences ,Subretinal Fluid ,IRF, intraretinal fluid ,Middle Aged ,fvPED, fibrovascular pigment epithelium detachment ,MNV, macular neovascularization ,VEGF, vascular endothelial growth factor ,Hyperreflective foci ,Serous fluid ,medicine.anatomical_structure ,Female ,Original Article ,AI, artificial intelligence ,medicine.symptom ,ELM, external limiting membrane ,Tomography, Optical Coherence ,medicine.medical_specialty ,RPE, retinal pigment epithelium ,PED, pigment epithelium detachment ,Drusen ,Retina ,03 medical and health sciences ,Deep Learning ,HRF, hyperreflective foci ,sPED, serous pigment epithelial detachment ,Age related ,Ophthalmology ,3D, 3-dimensional ,medicine ,Humans ,VA, visual acuity ,age-related macular degeneration ,Aged ,Retrospective Studies ,030304 developmental biology ,Retinal pigment epithelium ,business.industry ,Retinal Detachment ,Macular degeneration ,medicine.disease ,Choroidal Neovascularization ,eye diseases ,automated ,OCT ,Wet Macular Degeneration ,030221 ophthalmology & optometry ,CST, central subfield thickness ,sense organs ,SD, standard deviation ,business ,neovascular - Abstract
Purpose To apply a deep learning algorithm for automated, objective, and comprehensive quantification of OCT scans to a large real-world dataset of eyes with neovascular age-related macular degeneration (AMD) and make the raw segmentation output data openly available for further research. Design Retrospective analysis of OCT images from the Moorfields Eye Hospital AMD Database. Participants A total of 2473 first-treated eyes and 493 second-treated eyes that commenced therapy for neovascular AMD between June 2012 and June 2017. Methods A deep learning algorithm was used to segment all baseline OCT scans. Volumes were calculated for segmented features such as neurosensory retina (NSR), drusen, intraretinal fluid (IRF), subretinal fluid (SRF), subretinal hyperreflective material (SHRM), retinal pigment epithelium (RPE), hyperreflective foci (HRF), fibrovascular pigment epithelium detachment (fvPED), and serous PED (sPED). Analyses included comparisons between first- and second-treated eyes by visual acuity (VA) and race/ethnicity and correlations between volumes. Main Outcome Measures Volumes of segmented features (mm3) and central subfield thickness (CST) (μm). Results In first-treated eyes, the majority had both IRF and SRF (54.7%). First-treated eyes had greater volumes for all segmented tissues, with the exception of drusen, which was greater in second-treated eyes. In first-treated eyes, older age was associated with lower volumes for RPE, SRF, NSR, and sPED; in second-treated eyes, older age was associated with lower volumes of NSR, RPE, sPED, fvPED, and SRF. Eyes from Black individuals had higher SRF, RPE, and serous PED volumes compared with other ethnic groups. Greater volumes of the majority of features were associated with worse VA. Conclusions We report the results of large-scale automated quantification of a novel range of baseline features in neovascular AMD. Major differences between first- and second-treated eyes, with increasing age, and between ethnicities are highlighted. In the coming years, enhanced, automated OCT segmentation may assist personalization of real-world care and the detection of novel structure–function correlations. These data will be made publicly available for replication and future investigation by the AMD research community.
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- 2021
7. Artificial Intelligence–Enabled POCUS in the COVID-19 ICU
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Akhil Narang, Baljash Cheema, James M. Walter, and James D. Thomas
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0301 basic medicine ,2019-20 coronavirus outbreak ,medicine.medical_specialty ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,education ,030105 genetics & heredity ,POCUS, point-of-care ultrasound ,Cardiac Ultrasound ,Hand movements ,cardiac ultrasound ,03 medical and health sciences ,0302 clinical medicine ,IVC, inferior vena cava ,medicine ,EF, ejection fraction ,Diseases of the circulatory (Cardiovascular) system ,Mini-Focus Issue: Imaging ,Medical physics ,Case Report: Technical Corner ,COVID-19, coronavirus disease-2019 ,business.industry ,Point of care ultrasound ,SARS-CoV-2, severe acute respiratory syndrome-coronavirus-2 ,COVID-19 ,deep learning ,point of care ultrasound ,artificial intelligence ,ECMO - Extracorporeal membrane oxygenation ,ICU, intensive care unit ,RV, right ventricle ,LV, left ventricle ,RC666-701 ,AI, artificial intelligence ,Cardiology and Cardiovascular Medicine ,business ,ECMO, extracorporeal membrane oxygenation ,030217 neurology & neurosurgery - Abstract
We present the novel use of a deep learning–derived technology trained on the skilled hand movements of cardiac sonographers that guides novice users to acquire high-quality bedside cardiac ultrasound images. We illustrate its use at the point of care through a series of patient encounters in the COVID-19 intensive care unit. (Level of Difficulty: Beginner.), Graphical abstract
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- 2021
8. Artificial intelligence in clinical care amidst COVID-19 pandemic: A systematic review
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Konstantina S. Nikita, Eleni S. Adamidi, and Konstantinos Mitsis
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LR, Logistic Regression ,APTT, Activated Partial Thromboplastin Time ,DNN, Deep Neural Networks ,GNB, Gaussian Naïve Bayes ,RSV, Respiratory Syncytial Virus ,SVM, Support Vector Machine ,Review ,Disease ,Biochemistry ,WBC, White Blood Cell count ,0302 clinical medicine ,Multimodal data ,DLC, Density Lipoprotein Cholesterol ,Medicine ,CPP, COVID-19 Positive Patients ,Nadam optimizer, Nesterov Accelerated Adaptive Moment optimizer ,0303 health sciences ,CRT, Classification and Regression Decision Tree ,Prognosis ,LDLC, Low Density Lipoprotein Cholesterol ,CRP, C-Reactive Protein ,GFS, Gradient boosted feature selection ,LDA, Linear Discriminant Analysis ,Systematic review ,ADA, Adenosine Deaminase ,ML, Machine Learning ,CNN, Convolutional Neural Networks ,030220 oncology & carcinogenesis ,GGT, Glutamyl Transpeptidase ,RBP, Retinol Binding Protein ,RF, Random Forest ,NLP, Natural Language Processing ,INR, International Normalized Ratio ,LASSO, Least Absolute Shrinkage and Selection Operator ,FCV, Fold Cross Validation ,SEN, Sensitivity ,Biophysics ,ABG, Arterial Blood Gas ,SRLSR, Sparse Rescaled Linear Square Regression ,RBF, Radial Basis Function ,AI, Artificial Intelligence ,03 medical and health sciences ,PWD, Platelet Distribution Width ,RFE, Recursive Feature Elimination ,Genetics ,OB, Occult Blood test ,Paco2, Arterial Carbondioxide Tension ,MLP, MultiLayer Perceptron ,DL, Deep Learning ,ED, Emergency Department ,Guideline ,CI, Confidence Interval ,ANN, Artificial Neural Networks ,GFR, Glomerular Filtration Rate ,MPV, Mean Platelet Volume ,TBA, Total Bile Acid ,Adaboost, Adaptive Boosting ,TP248.13-248.65 ,MCV, Mean corpuscular volume ,ET, Extra Trees ,Artificial intelligence ,L1LR, L1 Regularized Logistic Regression ,MCHC, Mean Corpuscular Hemoglobin Concentration ,ARMED, Attribute Reduction with Multi-objective Decomposition Ensemble optimizer ,CK-MB, Creatine Kinase isoenzyme ,LSTM, Long-Short Term Memory ,FL, Federated Learning ,PCT, Thrombocytocrit ,Structural Biology ,Pandemic ,Diagnosis ,TTS, Training Test Split ,HDLC, High Density Lipoprotein Cholesterol ,PPV, Positive Predictive Values ,k-NN, K-Nearest Neighbor ,Computer Science Applications ,BUN, Blood Urea Nitrogen ,FiO2, Fraction of Inspiration O2 ,RBC, Red Blood Cell ,SG, Specific Gravity ,GDCNN, Genetic Deep Learning Convolutional Neural Network ,Screening ,XGB, eXtreme Gradient Boost ,Apol B, Apolipoprotein B ,GBDT, Gradient Boost Decision Tree ,PaO2, Arterial Oxygen Tension ,Biotechnology ,NB, Naïve Bayes ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,SMOTE, Synthetic Minority Oversampling Technique ,Apol AI, Apolipoprotein AI ,CoxPH, Cox Proportional Hazards ,Acc, Accuracy ,AUC, Area Under the Curve ,ComputingMethodologies_COMPUTERGRAPHICS ,030304 developmental biology ,ESR, Erythrocyte Sedimentation Rate ,LDH, Lactate Dehydrogenase ,BNB, Bernoulli Naïve Bayes ,business.industry ,RDW, Red blood cell Distribution Width ,NPV, Negative Predictive Values ,GBM light, Gradient Boosting Machine light ,DCNN, Deep Convolutional Neural Networks ,SPE, Specificity ,COVID-19 ,Inception Resnet, Inception Residual Neural Network ,DT, Decision Tree ,MRMR, Maximum Relevance Minimum Redundancy ,SaO2, Arterial Oxygen saturation ,business ,Predictive modelling - Abstract
Graphical abstract, The worldwide health crisis caused by the SARS-Cov-2 virus has resulted in>3 million deaths so far. Improving early screening, diagnosis and prognosis of the disease are critical steps in assisting healthcare professionals to save lives during this pandemic. Since WHO declared the COVID-19 outbreak as a pandemic, several studies have been conducted using Artificial Intelligence techniques to optimize these steps on clinical settings in terms of quality, accuracy and most importantly time. The objective of this study is to conduct a systematic literature review on published and preprint reports of Artificial Intelligence models developed and validated for screening, diagnosis and prognosis of the coronavirus disease 2019. We included 101 studies, published from January 1st, 2020 to December 30th, 2020, that developed AI prediction models which can be applied in the clinical setting. We identified in total 14 models for screening, 38 diagnostic models for detecting COVID-19 and 50 prognostic models for predicting ICU need, ventilator need, mortality risk, severity assessment or hospital length stay. Moreover, 43 studies were based on medical imaging and 58 studies on the use of clinical parameters, laboratory results or demographic features. Several heterogeneous predictors derived from multimodal data were identified. Analysis of these multimodal data, captured from various sources, in terms of prominence for each category of the included studies, was performed. Finally, Risk of Bias (RoB) analysis was also conducted to examine the applicability of the included studies in the clinical setting and assist healthcare providers, guideline developers, and policymakers.
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- 2021
9. A review on machine learning approaches and trends in drug discovery
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Victor Maojo, Nereida Rodriguez-Fernandez, Adrian Carballal, Carlos Fernandez-Lozano, Francisco J. Novoa, Alejandro Pazos, Paula Carracedo-Reboredo, Francisco Cedrón, and Jose Liñares-Blanco
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GNN, Graph Neural Networks ,Computer science ,CPI, Compound-protein interaction ,Review ,computer.software_genre ,NB, Naive Bayes ,FNN, Fully Connected Neural Networks ,Biochemistry ,Field (computer science) ,AUC, Area under the Curve ,PCA, Principal Component Analyisis ,Machine Learning ,DNA, Deoxyribonucleic acid ,ADMET, Absorption, distribution, metabolism, elimination and toxicity ,Structural Biology ,Drug Discovery ,MCC, Matthews correlation coefficient ,GEO, Gene Expression Omnibus ,t-SNE, t-Distributed Stochastic Neighbor Embedding ,Drug discovery ,QSAR ,Cheminformatics ,BBB, Blood–Brain barrier ,OOB, Out of Bag ,Molecular Descriptors ,Computer Science Applications ,CNS, Central Nervous System ,MKL, Multiple Kernel Learning ,ML, Machine Learning ,CNN, Convolutional Neural Networks ,RF, Random Forest ,Biotechnology ,CV, Cross Validation ,SVM, Support Vector Machines ,Quantitative structure–activity relationship ,GCN, Graph Convolutional Networks ,MACCS, Molecular ACCess System ,Biophysics ,QSAR, Quantitative structure–activity relationship ,FP, Fringerprints ,Machine learning ,SMILES, simplified molecular-input line-entry system ,ADR, Adverse Drug Reaction ,KEGG, Kyoto Encyclopedia of Genes and Genomes ,WHO, World Health Organization ,MD, Molecular Descriptors ,AI, Artificial Intelligence ,Deep Learning ,Component (UML) ,GO, Gene Ontology ,ECFP, Extended Connectivity Fingerprints ,Genetics ,Set (psychology) ,ComputingMethodologies_COMPUTERGRAPHICS ,APFP, Atom Pairs 2d FingerPrint ,business.industry ,DL, Deep Learning ,Deep learning ,CDK, Chemical Development Kit ,RNA, Ribonucleic Acid ,FDA, Food and Drug Administration ,ANN, Artificial Neural Networks ,FS, Feature Selection ,TCGA, The Cancer Genome Atlas ,State (computer science) ,Artificial intelligence ,business ,computer ,TP248.13-248.65 - Abstract
Graphical abstract, Highlights • Machine Learning in drug discovery has greatly benefited the pharmaceutical industry. • Application of machine algorithms must entail a robust design in real clinical tasks. • Trending machine learning algorithms in drug design: NB, SVM, RF and ANN., Drug discovery aims at finding new compounds with specific chemical properties for the treatment of diseases. In the last years, the approach used in this search presents an important component in computer science with the skyrocketing of machine learning techniques due to its democratization. With the objectives set by the Precision Medicine initiative and the new challenges generated, it is necessary to establish robust, standard and reproducible computational methodologies to achieve the objectives set. Currently, predictive models based on Machine Learning have gained great importance in the step prior to preclinical studies. This stage manages to drastically reduce costs and research times in the discovery of new drugs. This review article focuses on how these new methodologies are being used in recent years of research. Analyzing the state of the art in this field will give us an idea of where cheminformatics will be developed in the short term, the limitations it presents and the positive results it has achieved. This review will focus mainly on the methods used to model the molecular data, as well as the biological problems addressed and the Machine Learning algorithms used for drug discovery in recent years.
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- 2021
10. Artificial intelligence in gastrointestinal endoscopy
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Rabindra R. Watson, Mansour A. Parsi, Shelby Sullivan, Allison R. Schulman, Guru Trikudanathan, David R. Lichtenstein, Rahul Pannala, John T. Maple, Arvind J. Trindade, Joshua Melson, and Kumar Krishnan
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CNN, convolutional neural network ,ADR, adenoma detection rate ,AMR, adenoma miss rate ,Convolutional neural network ,law.invention ,03 medical and health sciences ,0302 clinical medicine ,Capsule endoscopy ,law ,CADx, CAD studies for colon polyp classification ,BE, Barrett’s esophagus ,VLE, volumetric laser endomicroscopy ,WCE, wireless capsule endoscopy ,Medicine ,Radiology, Nuclear Medicine and imaging ,ML, machine learning ,Gastrointestinal endoscopy ,SVM, support vector machine ,PIVI, preservation and Incorporation of Valuable Endoscopic Innovations ,DL, deep learning ,Contextual image classification ,Artificial neural network ,business.industry ,Deep learning ,Gastroenterology ,NBI, narrow-band imaging ,WL, white light ,CAD, computer-aided diagnosis ,ANN, artificial neural network ,HDWL, high-definition white light ,medicine.disease ,CI, confidence interval ,GI, gastroenterology ,ASGE society document ,NPV, negative predictive value ,Computer-aided diagnosis ,030220 oncology & carcinogenesis ,Barrett's esophagus ,CRC, colorectal cancer ,HD-WLE, high-definition white light endoscopy ,AI, artificial intelligence ,030211 gastroenterology & hepatology ,CADe, CAD studies for colon polyp detection ,Artificial intelligence ,business - Abstract
Background and Aims Artificial intelligence (AI)-based applications have transformed several industries and are widely used in various consumer products and services. In medicine, AI is primarily being used for image classification and natural language processing and has great potential to affect image-based specialties such as radiology, pathology, and gastroenterology (GE). This document reviews the reported applications of AI in GE, focusing on endoscopic image analysis. Methods The MEDLINE database was searched through May 2020 for relevant articles by using key words such as machine learning, deep learning, artificial intelligence, computer-aided diagnosis, convolutional neural networks, GI endoscopy, and endoscopic image analysis. References and citations of the retrieved articles were also evaluated to identify pertinent studies. The manuscript was drafted by 2 authors and reviewed in person by members of the American Society for Gastrointestinal Endoscopy Technology Committee and subsequently by the American Society for Gastrointestinal Endoscopy Governing Board. Results Deep learning techniques such as convolutional neural networks have been used in several areas of GI endoscopy, including colorectal polyp detection and classification, analysis of endoscopic images for diagnosis of Helicobacter pylori infection, detection and depth assessment of early gastric cancer, dysplasia in Barrett’s esophagus, and detection of various abnormalities in wireless capsule endoscopy images. Conclusions The implementation of AI technologies across multiple GI endoscopic applications has the potential to transform clinical practice favorably and improve the efficiency and accuracy of current diagnostic methods.
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- 2020
11. Global Public Health Database Support to Population-Based Management of Pandemics and Global Public Health Crises, Part II: The Database
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Burkle Jr., Frederick M., Bradt, David A., Green, Joseph, and Ryan, Benjamin J.
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Databases, Factual ,pandemics ,Emergency Nursing ,Global Health ,WHO, World Health Organization ,03 medical and health sciences ,0302 clinical medicine ,PBMT, population-based management team ,Humans ,030212 general & internal medicine ,Special Report ,COVID-19, coronavirus disease 2019 ,030304 developmental biology ,global public health ,0303 health sciences ,SARS-CoV-2 ,public health ,COVID-19 ,PBM, population-based management ,GPH, global public health ,PH, public health ,Communicable Disease Control ,Emergency ,Emergency Medicine ,AI, artificial intelligence ,population-based management ,triage - Abstract
This two-part article examines the global public health (GPH) information system deficits emerging in the coronavirus disease 2019 (COVID-19) pandemic. It surveys past, missed opportunities for public health (PH) information system and operational improvements, examines current megatrend changes to information management, and describes a new multi-disciplinary model for population-based management (PBM) supported by a GPH Database applicable to pandemics and GPH crises.
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- 2020
12. Artificial Intelligence and Echocardiography: A Primer for Cardiac Sonographers
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Madeline Jankowski, Peg Knoll, Ashlee Davis, Richie Palma, Kristen Billick, David B. Adams, Kenneth Horton, Alan Paloma, and Jane E. Marshall
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CNN, Convolutional neural network ,Artificial intelligence ,business.industry ,AI, Artificial intelligence ,Deep learning ,030204 cardiovascular system & hematology ,Article ,Patient care ,030218 nuclear medicine & medical imaging ,Machine Learning ,03 medical and health sciences ,0302 clinical medicine ,Echocardiography ,EF, Ejection fraction ,Sonographer ,Medical imaging ,Humans ,Medicine ,Radiology, Nuclear Medicine and imaging ,Cardiology and Cardiovascular Medicine ,business ,Neural networks ,Forecasting - Abstract
Artificial intelligence (AI) is emerging as a key component in diagnostic medical imaging, including echocardiography. AI with deep learning has already been used with automated view labeling, measurements, and interpretation. As the development and use of AI in echocardiography increase, potential concerns may be raised by cardiac sonographers and the profession. This report, from a sonographer's perspective, focuses on defining AI, the basics of the technology, identifying some current applications of AI, and how the use of AI may improve patient care in the future., Highlights • AI will have a strong role in echocardiography. • AI will guide image acquisition and optimization. • AI for image analysis may aid in interpretation. • AI is a tool that will not replace sonographers but will help them be more efficient.
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- 2020
13. Machine learning approach to predict medication overuse in migraine patients
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Fabio Massimo Zanzotto, Antonella Spila, Piero Barbanti, Gabriella Egeo, Patrizia Ferroni, Alessandro Rullo, Raffaele Palmirotta, Noemi Scarpato, Luisa Fofi, and Fiorella Guadagni
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Artificial intelligence ,Decision support system ,BMI, body mass index ,SVM, Support Vector Machine ,Decision support systems ,Logistic regression ,Biochemistry ,0302 clinical medicine ,KELP, Kernel-based Learning Platform ,Structural Biology ,Medicine ,0303 health sciences ,NSAID, nonsteroidal anti-inflammatory drugs ,RO, Random Optimization ,Computer Science Applications ,MKL, Multiple Kernel Learning ,DBH 19-bp I/D polymorphism, Dopamine-Beta-Hydroxylase 19 bp insertion/deletion polymorphism ,ML, Machine Learning ,030220 oncology & carcinogenesis ,Medication overuse ,Research Article ,Biotechnology ,medicine.medical_specialty ,lcsh:Biotechnology ,MO, Medication Overuse ,ROC, Receiver operating characteristic ,Biophysics ,DSS, Decision Support System ,Discriminatory power ,AI, Artificial Intelligence ,03 medical and health sciences ,lcsh:TP248.13-248.65 ,Internal medicine ,LRs, likelihood ratios ,Machine learning ,ICT, Information and Communications Technology ,Genetics ,AUC, Area Under the Curve ,Migraine ,ComputingMethodologies_COMPUTERGRAPHICS ,030304 developmental biology ,PVI, Predictive Value Imputation ,business.industry ,medicine.disease ,CI, Confidence Interval ,SE, Standard Error ,Risk evaluation ,Weighting ,Support vector machine ,business - Abstract
Graphical abstract, Highlights • Medication overuse is related to chronicization and medication-overuse headache. • Prediction of medication overuse (MO) is a challenge in the management of migraine. • Machine learning and random optimization could help to estimate MO risk in migraine. • A customized decision support system was devised for migraine clinical management. • This approach may exploit significant patterns in data connoting causality., Machine learning (ML) is largely used to develop automatic predictors in migraine classification but automatic predictors for medication overuse (MO) in migraine are still in their infancy. Thus, to understand the benefits of ML in MO prediction, we explored an automated predictor to estimate MO risk in migraine. To achieve this objective, a study was designed to analyze the performance of a customized ML-based decision support system that combines support vector machines and Random Optimization (RO-MO). We used RO-MO to extract prognostic information from demographic, clinical and biochemical data. Using a dataset of 777 consecutive migraine patients we derived a set of predictors with discriminatory power for MO higher than that observed for baseline SVM. The best four were incorporated into the final RO-MO decision support system and risk evaluation on a five-level stratification was performed. ROC analysis resulted in a c-statistic of 0.83 with a sensitivity and specificity of 0.69 and 0.87, respectively, and an accuracy of 0.87 when MO was predicted by at least three RO-MO models. Logistic regression analysis confirmed that the derived RO-MO system could effectively predict MO with ORs of 5.7 and 21.0 for patients classified as probably (3 predictors positive), or definitely at risk of MO (4 predictors positive), respectively. In conclusion, a combination of ML and RO – taking into consideration clinical/biochemical features, drug exposure and lifestyle – might represent a valuable approach to MO prediction in migraine and holds the potential for improving model precision through weighting the relative importance of attributes.
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- 2020
14. Artificial intelligence (AI) and big data in cancer and precision oncology
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Zodwa Dlamini, Rodney Hull, Flavia Zita Francies, and Rahaba Marima
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Biomarker identification ,Artificial intelligence ,Risk predictor ,WSI, Whole Slide Imaging ,Computer science ,lcsh:Biotechnology ,Big data ,Biophysics ,Early detection ,Review ,FFPE, Formalin-Fixed Paraffin-Embedded ,Biochemistry ,AI, Artificial Intelligence ,Prognosis and drug discovery ,03 medical and health sciences ,0302 clinical medicine ,Structural Biology ,lcsh:TP248.13-248.65 ,Diagnosis ,Machine learning ,Genetics ,medicine ,Digital pathology ,ComputingMethodologies_COMPUTERGRAPHICS ,030304 developmental biology ,0303 health sciences ,business.industry ,LYNA, LYmph Node Assistant ,Cancer ,Deep learning ,Precision oncology ,medicine.disease ,Computer Science Applications ,Treatment ,Identification (information) ,CNV, Copy Number Variations ,Big datasets ,ML, Machine Learning ,030220 oncology & carcinogenesis ,TCGA, The Cancer Genome Atlas ,Medical imaging ,business ,NGS, Next Generation Sequencing ,NGS and bioinformatics ,Biotechnology - Abstract
Graphical abstract, Artificial intelligence (AI) and machine learning have significantly influenced many facets of the healthcare sector. Advancement in technology has paved the way for analysis of big datasets in a cost- and time-effective manner. Clinical oncology and research are reaping the benefits of AI. The burden of cancer is a global phenomenon. Efforts to reduce mortality rates requires early diagnosis for effective therapeutic interventions. However, metastatic and recurrent cancers evolve and acquire drug resistance. It is imperative to detect novel biomarkers that induce drug resistance and identify therapeutic targets to enhance treatment regimes. The introduction of the next generation sequencing (NGS) platforms address these demands, has revolutionised the future of precision oncology. NGS offers several clinical applications that are important for risk predictor, early detection of disease, diagnosis by sequencing and medical imaging, accurate prognosis, biomarker identification and identification of therapeutic targets for novel drug discovery. NGS generates large datasets that demand specialised bioinformatics resources to analyse the data that is relevant and clinically significant. Through these applications of AI, cancer diagnostics and prognostic prediction are enhanced with NGS and medical imaging that delivers high resolution images. Regardless of the improvements in technology, AI has some challenges and limitations, and the clinical application of NGS remains to be validated. By continuing to enhance the progression of innovation and technology, the future of AI and precision oncology show great promise.
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- 2020
15. Learning 4.0 - Ambition Guide
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Nogueira, Marcos Ant��nio, Nunes, Elsa, Henriques, Rui Pedro, Vishniakova, Elena, and Peir��, Paula
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Digitalisation ,Skills ,AI, Artificial intelligence ,Communities ,Learning - Abstract
The goal is to build a human-centric, sustainable society of the prosperous future for all citizens, the European union has been adopting visions for digital transformation of Europe by 2030. This ambition guide’s section outlines the broader landscape of European initiatives that orient projectsat any level in planning and implementing a coherent roadmap for a successful smart transformation. Thus, projects implementing this ambition guide may also align with the following strategies, visions and platforms.
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- 2022
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16. Using AI chatbots to provide self-help depression interventions for university students: A randomized trial of effectiveness☆
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Hao Liu, Huaming Peng, Xingyu Song, Chenzi Xu, and Meng Zhang
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ANOVA, Analysis of Variance ,CSQ-8, the Client Satisfaction Questionnaires-8 ,Health Informatics ,Information technology ,CBT, Cognitive Behavioral Therapy ,SD, Standard Deviation ,DST, Dialogue Status Tracking ,T58.5-58.64 ,PANAS, the Positive and Negative Affect Schedule (PANAS) (Watson et al., 19s88) ,Full length Article ,BF1-990 ,AI, Artificial Intelligence ,GAD-7, the Generalized Anxiety Disorder Scale-7 (GAD-7) ,DPO, Dialogue Policy Optimization ,mHealth ,PHQ-9, the Patient Health Questionnaires-9 ,WAI-SR, the Working Alliance Inventory-Short Revised ,Psychology ,AI Artificial Intelligence ,IPI, Internet-based Psychological Interventions ,ANCONA, Analysis of Covariance ,ITT, Intent-to-Treat ,Public health informatics - Abstract
Background Depression impacts the lives of a large number of university students. Mobile-based therapy chatbots are increasingly being used to help young adults who suffer from depression. However, previous trials have short follow-up periods. Evidence of effectiveness in pragmatic conditions are still in lack. Objective This study aimed to compare chatbot therapy to bibliotherapy, which is a widely accepted and proven-useful self-help psychological intervention. The main objective of this study is to add to the evidence of effectiveness for chatbot therapy as a convenient, affordable, interactive self-help intervention for depression. Methods An unblinded randomized controlled trial with 83 university students was conducted. The participants were randomly assigned to either a chatbot test group (n = 41) to receive a newly developed chatbot-delivered intervention, or a bibliotherapy control group (n = 42) to receive a minimal level of bibliotherapy. A set of questionnaires was implemented as measurements of clinical variables at baseline and every 4 weeks for a period of 16 weeks, which included the Patient Health Questionnaire-9 (PHQ-9), the Generalized Anxiety Disorder scale (GAD-7), the Positive and Negative Affect Scale (PANAS). The Client Satisfaction Questionnaire-8 (CSQ-8) and the Working Alliance Inventory-Short Revised (WAI-SR) were used to measure satisfaction and therapeutic alliance after the intervention. Participants' self-reported adherence and feedback on the therapy chatbot were also collected. Results Participants were all university students (undergraduate students (n = 31), postgraduate students (n = 52)). They were between 19 and 28 years old (mean = 23.08, standard deviation (SD) = 1.76) and 55.42% (46/83) female. 24.07% (20/83) participants were lost to follow-up. No significant group difference was found at baseline. In the intention-to-treat analysis, individuals in the chatbot test group showed a significant reduction in the PHQ-9 scores (F = 22.89; P, Highlights • A chatbot-delivered depression therapy was compared to a minimal level of bibliotherapy in a 16-week follow-up period. • The therapy chatbot was able to provide depression intervention under cognitive behavioral therapy (CBT) principles. • The therapy chatbot reduced depression in the 16 weeks intervention period and reduced anxiety in the first 4 weeks. • A significantly better therapeutic alliance was achieved in the chatbot-delivered therapy compared to the bibliotherapy.
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- 2022
17. Personalized predictions of adverse side effects of the COVID-19 vaccines
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Elham Jamshidi, Amirhossein Asgary, Ali Yazdizadeh Kharrazi, Nader Tavakoli, Alireza Zali, Maryam Mehrazi, Masoud Jamshidi, Babak Farrokhi, Ali Maher, Christophe von Garnier, Sahand Jamal Rahi, and Nahal Mansouri
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machine learning ,Multidisciplinary ,covid-19 ,vaccine ,adverse side effects ,azd1222 ,AI, artificial intelligence ,AZD1222 ,Adverse side effects ,Artificial intelligence ,AstraZeneca ,COVID-19 ,COVID-19, coronavirus disease of 2019 ,Covaxin ,KNN, K Nearest Neighbors ,LR, logistic regression ,ML, machine learning ,MLP, Multi-Layer Perceptron ,Machine learning ,Moderna ,Pfizer ,RF, random forest ,ROC, receiver operating characteristic ,Sinopharm ,Sputnik V ,Symptom ,Vaccine ,astrazeneca ,sinopharm ,artificial intelligence ,symptom ,moderna ,sputnik v - Abstract
Background: Misconceptions about adverse side effects are thought to influence public acceptance of the Coronavirus disease 2019 (COVID-19) vaccines negatively. To address such perceived disadvantages of vaccines, a novel machine learning (ML) approach was designed to generate personalized predictions of the most common adverse side effects following injection of six different COVID-19 vaccines based on personal and health-related characteristics.Methods: Prospective data of adverse side effects following COVID-19 vaccination in 19943 participants from Iran and Switzerland was utilized. Six vaccines were studied: The AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2, and the mRNA-1273 vaccine. The eight side ef-fects were considered as the model output: fever, fatigue, headache, nausea, chills, joint pain, muscle pain, and injection site reactions. The total input parameters for the first and second dose predictions were 46 and 54 features, respectively, including age, gender, lifestyle variables, and medical history. The performances of multiple ML models were compared using Area Under the Receiver Operating Characteristic Curve (ROC-AUC).Results: The total number of people receiving the first dose of the AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2, and mRNA-1273 were 6022, 7290, 5279, 802, 277, and 273, respectively. For the second dose, the numbers were 2851, 5587, 3841, 599, 242 and 228. The Logistic Regression model for predicting different side effects of the first dose achieved ROC-AUCs of 0.620-0.686, 0.685-0.716, 0.632-0.727, 0.527-0.598, 0.548-0.655, 0.545-0.712 for the AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2 and mRNA-1273 vaccines, respectively. The second dose models yielded ROC-AUCs of 0.777-0.867, 0.795-0.848, 0.857-0.906, 0.788-0.875, 0.683-0.850, and 0.486-0.680, respectively.Conclusions: Using a large cohort of recipients vaccinated with COVID-19 vaccines, a novel and personalized strategy was established to predict the occurrence of the most common adverse side effects with high accuracy. This technique can serve as a tool to inform COVID-19 vaccine se-lection and generate personalized factsheets to curb concerns about adverse side effects.
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- 2023
18. Sex-Specific Molecular Signatures of Fibrocalcific Aortic Valve Disease
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Holger Thiele and Florian Schlotter
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Aortic valve ,Aortic valve disease ,sex differences ,medicine.medical_specialty ,AS, aortic stenosis ,calcification ,Clinical Research ,Internal medicine ,medicine ,Diseases of the circulatory (Cardiovascular) system ,ML, machine learning ,PCA, principal component analysis ,business.industry ,CABG, coronary artery bypass graft ,fibrosis ,stenosis ,aortic stenosis ,medicine.disease ,artificial intelligence ,Sex specific ,aortic valve ,Stenosis ,medicine.anatomical_structure ,RC666-701 ,Cardiology ,AI, artificial intelligence ,Cardiology and Cardiovascular Medicine ,business ,Editorial Comment ,sex-differences ,Calcification - Abstract
Visual Abstract, Highlights • Differences in the clinical presentation and physiology of aortic stenosis in men and women complicate the management of the condition. • By combining traditional inferential statistics, artificial intelligence predictive modeling, and genetic pathway analysis, one can gain further insight into sex-specific gene expression patterns, potentially driving the valvular phenotype differences between the sexes. • Results from this study, implementing a mixed and comprehensive methodological approach, offer a foundation for further exploration of potential drug targets., Summary Male and female aortic stenosis patients have distinct valvular phenotypes, increasing the complexities in the evaluation of valvular pathophysiology. In this study, we present cutting-edge artificial intelligence analyses of transcriptome-wide array data from stenotic aortic valves to highlight differences in gene expression patterns between the sexes, using both sex-differentiated transcripts and unbiased gene selections. This approach enabled the development of efficient models with high predictive ability and determining the most significant sex-dependent contributors to calcification. In addition, analyses of function-related gene groups revealed enriched fibrotic pathways among female patients. Ultimately, we demonstrate that artificial intelligence models can be used to accurately predict aortic valve calcification by carefully analyzing sex-specific gene transcripts.
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- 2021
19. HPV prevention and control - The way forward
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Vorsters, Alex, Bosch Jose, Francesc Xavier, Poljak, Mario, Waheed, Dur-e-Nayab, Stanley, Margaret, Garland, Suzanne M., HPV Prevention Control Board, International Papillomavirus Society IPVS, HPV Prevention and Control Board and the International Papillomavirus Society (IPVS), University of Antwerp, Institut Català d'Oncologia, University of Ljubljana, University of Cambridge, University of Melbourne, and Universitat Oberta de Catalunya
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Male ,cervical cancer ,Epidemiology ,COVID-19, COronaVirus DIsease of 2019 ,Uterine Cervical Neoplasms ,Alphapapillomavirus ,tratamiento ,HIC, High income countries ,GACVS, Global advisory committee on vaccine safety ,prevention and control ,eliminación de la pandemia de COVID-19 ,Papillomaviridae ,GAVI, GAVI, the Vaccine Alliance ,cribratge ,treatment ,Vaccination ,tractament ,eliminació de la pandèmia COVID-19 ,vacunació ,AIDs, Acquired immunodeficiency syndrome ,HPV, Human papillomavirus ,HIV, Human immunodeficiency virus ,prevenció i control ,Screening ,VIA, Visual inspection with acetic acid ,Female ,UNICEF, United Nations Children's fund ,papilomavirus ,prevención y control ,VPH ,HPV ,tamizaje ,Adolescent ,Elimination ,LMIC, Low- and middle-income countries ,COVID-19 pandemic ,Article ,WHO, World Health Organization ,cáncer de cuello uterino ,vacunación ,elimination ,SARS-CoV-2, Severe acute respiratory syndrome Coronavirus-2 ,Humans ,Papillomavirus Vaccines ,NAAT, Nucleic acid amplification test ,Pandemics ,SARS-CoV-2 ,screening ,AI, Artificial intelligence ,càncer de coll uterí ,Papillomavirus Infections ,Public Health, Environmental and Occupational Health ,COVID-19 ,WLWHIV, Women living with HIV ,papil·lomavirus ,papillomaviruses DEM ,vaccination ,Prevention and control ,Treatment ,Cervical cancer ,Human medicine ,PCR, Polymerase chain reaction - Abstract
The global confrontation with COVID-19 has not only diverted current healthcare resources to deal with the infection but has also resulted in increased resources in the areas of testing and screening, as well as educating most of the global public of the benefits of vaccination. When the COVID-19 pandemic eventually recedes, the opportunity must not be missed to ensure that these newly created resources are maintained and redeployed for use in testing and immunisation against other vaccine-preventable infectious diseases. A notable example is infection by human papillomavirus (HPV), the commonest sexually transmitted human virus and the leading cause of a variety of cancers in both men and women, such as cervical, head and neck, anal, vaginal, vulvar and penile cancers. The most important is cervical cancer, the objective of the global elimination goals targeting the vaccination of young female and male adolescents, screening all women and treatment of all infected women. As the campaigns to control SARS-CoV-2, the eradication of HPV-induced cancers also relies on effective prevention and control programs. The lessons learned and the technical, logistical and human resources which have been established to combat COVID-19 by vaccination and testing must be applied to the eradication of other infections which affect the global population. This commentary summarizes the opportunities that the COVID-19 pandemic has created for HPV prevention and control, lists the already available tools for HPV control, and emphasizes the potential public health threats amidst the ongoing COVID-19 pandemic.
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- 2021
20. Learning rate of students detecting and annotating pediatric wrist fractures in supervised artificial intelligence dataset preparations
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Eszter Nagy, Robert Marterer, Franko Hržić, Erich Sorantin, and Sebastian Tschauner
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Fractures, Bone ,AI, Artificial intelligence ,DL, Deep learning ,DR, Digital radiography ,HITL, “Human- in-the-loop” ,IoU, Intersection over Union ,PACS ,Multidisciplinary ,Artificial Intelligence ,Radiologists ,Humans ,Wrist ,Child ,Radiology ,Students - Abstract
The use of artificial intelligence (AI) in image analysis is an intensively debated topic in the radiology community these days. AI computer vision algorithms typically rely on large-scale image databases, annotated by specialists. Developing and maintaining them is time-consuming, thus, the involvement of non-experts into the workflow of annotation should be considered. We assessed the learning rate of inexperienced evaluators regarding correct labeling of pediatric wrist fractures on digital radiographs. Students with and without a medical background labeled wrist fractures with bounding boxes in 7,000 radiographs over ten days. Pediatric radiologists regularly discussed their mistakes. We found F1 scores—as a measure for detection rate—to increase substantially under specialist feedback (mean 0.61±0.19 at day 1 to 0.97±0.02 at day 10, p
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- 2022
21. Rapid Exclusion of COVID Infection With the Artificial Intelligence Electrocardiogram
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Zachi I. Attia, Naveen L. Pereira, Anneli Svensson, Francisco Fernández-Avilés, Thomas F Luescher, Raja Sekhar Madathala, Jozef Bartunek, John Halamka, Henrik Jensen, Francisco Lopez Jimenez, Paari Dominic, Pyotr G. Platonov, Domenico Zagari, Pahlajani Db, Nikhita R Chennaiah Gari, Marco Merlo, Darryl D Esakof, Vladan Vukomanovic, John Signorino, Daniel C. DeSimone, Gianfranco Sinagra, Stefan Janssens, Kevin P. Cohoon, Francis J. Alenghat, Jennifer L. Dugan, Karl Dujardin, Melody Hermel, Michael E. Farkouh, Goran Loncar, Sanjiv M. Narayan, Suraj Kapa, Deepak Padmanabhan, Karam Turk-Adawi, Rickey E. Carter, Paul A. Friedman, Carolyn Lam Su Ping, Fahad Gul, Amit Noheria, Nidal Asaad, Arun Sridhar, Gaetano Antonio Lanza, Peter A. Noseworthy, Nicholas S. Peters, Marc K. Lahiri, Jessica Cruz, Brenda D Rodriguez Escenaro, Gaurav A. Upadhyay, Jose Alberto Pardo Gutierrez, Attia, Z. I., Kapa, S., Dugan, J., Pereira, N., Noseworthy, P. A., Jimenez, F. L., Cruz, J., Carter, R. E., Desimone, D. C., Signorino, J., Halamka, J., Chennaiah Gari, N. R., Madathala, R. S., Platonov, P. G., Gul, F., Janssens, S. P., Narayan, S., Upadhyay, G. A., Alenghat, F. J., Lahiri, M. K., Dujardin, K., Hermel, M., Dominic, P., Turk-Adawi, K., Asaad, N., Svensson, A., Fernandez-Aviles, F., Esakof, D. D., Bartunek, J., Noheria, A., Sridhar, A. R., Lanza, G. A., Cohoon, K., Padmanabhan, D., Pardo Gutierrez, J. A., Sinagra, G., Merlo, M., Zagari, D., Rodriguez Escenaro, B. D., Pahlajani, D. B., Loncar, G., Vukomanovic, V., Jensen, H. K., Farkouh, M. E., Luescher, T. F., Su Ping, C. L., Peters, N. S., and Friedman, P. A.
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COVID-19, coronavirus infectious disease 19 ,COVID-19/diagnosis ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,Population ,Predictive Value of Test ,ACE2, angiotensin-converting enzyme 2 ,SARS-CoV-2, severe acute respiratory syndrome coronavirus 2 ,Sensitivity and Specificity ,WHO, World Health Organization ,AUC, area under the curve ,Electrocardiography ,COVID-19 ,Case-Control Studies ,Humans ,Predictive Value of Tests ,Artificial Intelligence ,PCR, polymerase chain reaction ,Medicine ,education ,Volunteer ,education.field_of_study ,medicine.diagnostic_test ,business.industry ,Area under the curve ,Case-control study ,AI-ECG, artificial intelligence–enhanced electrocardiogram ,REDCap, Research Electronic Data Capture ,General Medicine ,PPV, positive predictive value ,NPV, negative predictive value ,Predictive value of tests ,Screening ,Original Article ,AI, artificial intelligence ,Artificial intelligence ,business ,Case-Control Studie ,COVID 19 ,Human - Abstract
OBJECTIVE: To rapidly exclude severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infection using artificial intelligence applied to the electrocardiogram (ECG).METHODS: A global, volunteer consortium from 4 continents identified patients with ECGs obtained around the time of polymerase chain reaction-confirmed COVID-19 diagnosis and age- and sex-matched controls from the same sites. Clinical characteristics, polymerase chain reaction results, and raw electrocardiographic data were collected. A convolutional neural network was trained using 26,153 ECGs (33.2% COVID positive), validated with 3826 ECGs (33.3% positive), and tested on 7870 ECGs not included in other sets (32.7% positive). Performance under different prevalence values was tested by adding control ECGs from a single high-volume site.RESULTS: The area under the curve for detection of acute COVID-19 infection in the test group was 0.767 (95% CI, 0.756 to 0.778; sensitivity, 98%; specificity, 10%; positive predictive value, 37%; negative predictive value, 91%). To more accurately reflect a real-world population, 50,905 normal controls were added to adjust the COVID prevalence to approximately 5% (2657/58,555), resulting in an area under the curve of 0.780 (95% CI, 0.771 to 0.790) with a specificity of 12.1% and a negative predictive value of 99.2%.CONCLUSION: Infection with SARS-CoV-2 results in electrocardiographic changes that permit the artificial intelligence-enhanced ECG to be used as a rapid screening test with a high negative predictive value (99.2%). This may permit the development of electrocardiography-based tools to rapidly screen individuals for pandemic control.
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- 2021
22. SARS-CoV-2 diagnosis using medical imaging techniques and artificial intelligence: A review
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Mohamed Hedi Bedoui, Ramzi Mahmoudi, Younes Arous, Narjes Benameur, Badii Hmida, Soraya Zaid, Laboratoire d'Informatique Gaspard-Monge (LIGM), Université Paris-Est Marne-la-Vallée (UPEM)-École des Ponts ParisTech (ENPC)-ESIEE Paris-Fédération de Recherche Bézout-Centre National de la Recherche Scientifique (CNRS), and Centre National de la Recherche Scientifique (CNRS)-Fédération de Recherche Bézout-ESIEE Paris-École des Ponts ParisTech (ENPC)-Université Paris-Est Marne-la-Vallée (UPEM)
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CNN, Convolutional neural network ,Pleural effusion ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,viruses ,CXR, Chest X-ray ,Clinical Findings ,Article ,030218 nuclear medicine & medical imaging ,[INFO.INFO-AI]Computer Science [cs]/Artificial Intelligence [cs.AI] ,03 medical and health sciences ,0302 clinical medicine ,Chest CT ,DNN, Deep neural network ,GAN, Generative adversarial network ,Medical Imaging Techniques ,Artificial Intelligence ,Medical imaging ,medicine ,[INFO.INFO-IM]Computer Science [cs]/Medical Imaging ,Radiology, Nuclear Medicine and imaging ,[INFO]Computer Science [cs] ,skin and connective tissue diseases ,Modality (human–computer interaction) ,business.industry ,SARS-CoV-2 ,AI, Artificial intelligence ,fungi ,GGO, Ground-glass opacities ,medicine.disease ,3. Good health ,respiratory tract diseases ,body regions ,Workflow ,Pneumothorax ,Radiology Nuclear Medicine and imaging ,030220 oncology & carcinogenesis ,CT, Computed tomography ,Identification (biology) ,Artificial intelligence ,Reticular Pattern ,business - Abstract
International audience; Objective: SARS-CoV-2 is a worldwide health emergency with unrecognized clinical features. This paper aims to review the most recent medical Imaging techniques used for the diagnosis of SARS-CoV-2 and their potential contributions to attenuate the pandemic. Recent researches, including Artificial Intelligence tools, will be described. Methods We review the main clinical features of SARS-CoV-2 revealed by different medical imaging techniques. First, we present the clinical findings of each technique. Then, we describe several artificial intelligence approaches introduced for the SARS-CoV-2 diagnosis. Results CT is the most accurate diagnostic modality of SARS-CoV-2. Additionally, ground-glass opacities and consolidation are the most common signs of SARS-CoV-2 in CT images. However, other findings such as reticular pattern, and crazy paving could be observed. We also found that pleural effusion and pneumothorax features are less common in SARS-CoV-2. According to the literature, the B lines artifacts and pleural line irregularities are the common signs of SARS-CoV-2 in ultrasound images. We have also stated the different studies, focusing on artificial intelligence tools, to evaluate the SARS-CoV-2 severity. We found that most of the reported works based on deep learning focused on the detection of SARS-CoV-2 from medical images while the challenge for the radiologists is how to differentiate between SARS-CoV-2 and other viral infections with the same clinical features. Conclusion The identification of SARS-CoV-2 manifestations on medical images is a key step in radiological workflow for the diagnosis of the virus and could be useful for researchers working on computer-aided diagnosis of pulmonary infections.
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- 2021
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23. Pyloric adenomatous carcinoma of the gallbladder following laparoscopic cholecystectomy: A case report
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Nao Kitasaki, Tomoyuki Abe, Masahiro Nakahara, Toshio Noriyuki, Keiji Hanada, and Akihiko Oshita
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medicine.medical_specialty ,Adenoma ,medicine.medical_treatment ,Case Report ,HGM, human gastric mucin ,DL-DSS, deep learning-based decision support system ,CA19-9, carbohydrate antigen 19-9 ,medicine ,Gallbladder cancer ,Gallbladder Body ,MRCP, magnetic resonance cholangiopancreatography ,Magnetic resonance cholangiopancreatography ,medicine.diagnostic_test ,business.industry ,US, ultrasonography ,Gallbladder ,Incidental gallbladder cancer ,medicine.disease ,CT, computed tomography ,medicine.anatomical_structure ,GBC, gallbladder cancer ,Abdominal ultrasonography ,Cholecystectomy ,AI, artificial intelligence ,Laparoscopy ,Surgery ,Radiology ,CEA, carcinoembryonic antigen ,business ,EUS, endoscopic ultrasound ,Gallbladder Adenoma ,LC, laparoscopic cholecystectomy ,Gallbladder adenoma - Abstract
Introduction Adenoma and intra-adenoma carcinoma of the gallbladder are relatively rare diseases, and the World Health Organization classification reports a frequency of 0.3% for gallbladder adenomas. Precise preoperative diagnosis of gallbladder cancer, especially in the early stages, is challenging. Herein, we report a case of pyloric adenomatous carcinoma of the gallbladder, diagnosed by laparoscopic cholecystectomy and pathology, along with a literature review. This case was reported in accordance with the SCARE 2020 Guideline (Ref). Presentation of case A 62-year-old woman was diagnosed with a 4-mm polypoid lesion in the gallbladder during a medical examination. The patient was followed-up by ultrasonography (US) once a year and was referred to our department because of an increase in size. Carcinoembryonic antigen and carbohydrate antigen 19-9 levels were within normal limits. Abdominal ultrasonography revealed a pedunculated polypoid lesion in the body of the gallbladder measuring 8 mm. Computed tomography demonstrated that the whole tumor was enhanced in the early phase without significant lymph node enlargement. Magnetic resonance cholangiopancreatography demonstrated a type Ip polypoid lesion located in the body of the gallbladder without pancreaticobiliary junctional abnormalities. Endoscopic ultrasound detected a superficial nodular-type Ip polypoid lesion in the gallbladder body with a parenchyma-like internal echogenic pattern. Discussion Based on these findings, the patient was diagnosed with gallbladder adenoma, and laparoscopic cholecystectomy was performed. Histopathological examination revealed the tumor was a papillary growth of atypical high columnar epithelial cells. The final diagnosis was pyloric adenoma with high-grade dysplasia and intra-adenoma carcinoma. The patient is currently undergoing outpatient follow-up without recurrence for 1 year. Conclusion Early gallbladder carcinoma with adenoma should be considered in patients with small gallbladder polypoid lesions. Considering the surgical stress of cholecystectomy and the malignant potential of gallbladder cancer, preceding surgery would be acceptable., Highlights • Incidental gallbladder cancer is rare and preoperative assessment of GBPL is important. • Considering the malignant potential of GBC, preceding surgery would be acceptable.
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- 2021
24. HistoClean: Open-source software for histological image pre-processing and augmentation to improve development of robust convolutional neural networks
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Manuel Salto-Tellez, Matthew P. Humphries, Matthew Hagan, Richard Gault, Victoria Bingham, Stephanie G Craig, Jacqueline A James, Amélie Viratham Pulsawatdi, Simon Rajendran, Javier I Quezada-Marín, and Kris McCombe
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Artificial intelligence ,Computer science ,Biophysics ,Overfitting ,Machine learning ,computer.software_genre ,Image augmentation ,Biochemistry ,Convolutional neural network ,Image (mathematics) ,Digital image ,AI, Artificial Intelligence ,SDG 3 - Good Health and Well-being ,Structural Biology ,Region of interest ,Artificial Intelligence ,Genetics ,digital image analysis ,HistoClean ,AUC, Area Under Curve ,Graphical user interface ,ComputingMethodologies_COMPUTERGRAPHICS ,Digital image analysis ,GUI, Graphical User Interface ,business.industry ,Deep learning ,Digital pathology ,DIA, Digital Image Analysis ,Image Enhancement ,Open-source software ,Computer Science Applications ,ROC, Receiver-Operator Characteristic ,Image pre-processing ,Workflow ,business ,computer ,TP248.13-248.65 ,Biotechnology ,Coding (social sciences) ,Open-source tool ,Research Article - Abstract
Graphical abstract, The growth of digital pathology over the past decade has opened new research pathways and insights in cancer prediction and prognosis. In particular, there has been a surge in deep learning and computer vision techniques to analyse digital images. Common practice in this area is to use image pre-processing and augmentation to prevent bias and overfitting, creating a more robust deep learning model. This generally requires consultation of documentation for multiple coding libraries, as well as trial and error to ensure that the techniques used on the images are appropriate. Herein we introduce HistoClean; a user-friendly, graphical user interface that brings together multiple image processing modules into one easy to use toolkit. HistoClean is an application that aims to help bridge the knowledge gap between pathologists, biomedical scientists and computer scientists by providing transparent image augmentation and pre-processing techniques which can be applied without prior coding knowledge. In this study, we utilise HistoClean to pre-process images for a simple convolutional neural network used to detect stromal maturity, improving the accuracy of the model at a tile, region of interest, and patient level. This study demonstrates how HistoClean can be used to improve a standard deep learning workflow via classical image augmentation and pre-processing techniques, even with a relatively simple convolutional neural network architecture. HistoClean is free and open-source and can be downloaded from the Github repository here: https://github.com/HistoCleanQUB/HistoClean.
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- 2021
25. Virtual reality and artificial intelligence for 3-dimensional planning of lung segmentectomies
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Alexander P.W.M. Maat, Anne-Marie C. Dingemans, Amir H Sadeghi, Edris A F Mahtab, Yannick J.H.J. Taverne, Ad J.J.C. Bogers, Robin Cornelissen, Cardiothoracic Surgery, and Pulmonary Medicine
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Pulmonary and Respiratory Medicine ,medicine.medical_specialty ,medicine.medical_treatment ,Computed tomography ,Virtual reality ,Surgical planning ,S, segment ,Benign pathology ,SDG 3 - Good Health and Well-being ,NSCLC, non–small cell lung cancer ,Thoracic Oncology ,DICOM, digital imaging and communication in medicine ,medicine ,2D, 2 dimensional ,VR, virtual reality ,segmentectomy ,Preoperative planning ,medicine.diagnostic_test ,business.industry ,VATS, video assisted thoracoscopic surgery ,video-assisted thoracoscopic surgery ,3D, 3 dimensional ,CT, computed tomography ,lung cancer ,preoperative planning ,Thoracic: Lung Cancer: Evolving Technology ,Cardiothoracic surgery ,Video-assisted thoracoscopic surgery ,virtual reality ,Surgery ,AI, artificial intelligence ,Artificial intelligence ,business - Abstract
Background There has been an increasing trend toward pulmonary segmentectomies to treat early-stage lung cancer, small intrapulmonary metastases, and localized benign pathology. A complete preoperative understanding of pulmonary anatomy is essential for accurate surgical planning and case selection. Identifying intersegmental divisions is extremely difficult when performed on computed tomography. For the preoperative planning of segmentectomies, virtual reality (VR) and artificial intelligence could allow 3-dimensional visualization of the complex anatomy of pulmonary segmental divisions, vascular arborization, and bronchial anatomy. This technology can be applied by surgeons preoperatively to gain better insight into a patient's anatomy for planning segmentectomy. Methods In this prospective observational pilot study, we aim to assess and demonstrate the technical feasibility and clinical applicability of the first dedicated artificial intelligence-based and immersive 3-dimensional-VR platform (PulmoVR; jointly developed and manufactured by Department of Cardiothoracic Surgery [Erasmus Medical Center, Rotterdam, The Netherlands], MedicalVR [Amsterdam, The Netherlands], EVOCS Medical Image Communication [Fysicon BV, Oss, The Netherlands], and Thirona [Nijmegen, The Netherlands]) for preoperative planning of video-assisted thoracoscopic segmentectomies. Results A total of 10 eligible patients for segmentectomy were included in this study after referral through the institutional thoracic oncology multidisciplinary team. PulmoVR was successfully applied as a supplementary imaging tool to perform video-assisted thoracoscopic segmentectomies. In 40% of the cases, the surgical strategy was adjusted due to the 3-dimensional-VR–based evaluation of anatomy. This underlines the potential benefit of additional VR-guided planning of segmentectomy for both surgeon and patient. Conclusions Our study demonstrates the successful development and clinical application of the first dedicated artificial intelligence and VR platform for the planning of pulmonary segmentectomy. This is the first study that shows an immersive virtual reality-based application for preoperative planning of segmentectomy to the best of our knowledge., Graphical abstract The identification of segmental anatomy for surgical planning of lung segmentectomy is quite challenging with conventional imaging. In the current study, a novel method is presented to create artificial intelligence based virtual reality reconstructions to prepare for thoracoscopic segmentectomies in 10 consecutive patients. VR, Virtual reality; CT, computed tomography.
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- 2021
26. Introducing computer-aided detection to the endoscopy suite
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Pu Wang, Mohammad Bilal, Tyler M. Berzin, and Jeremy R. Glissen Brown
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Engineering drawing ,medicine.diagnostic_test ,business.industry ,Suite ,Gastroenterology ,MEDLINE ,CADe, computer-aided detection ,Computer aided detection ,Endoscopy ,Tools and Technique ,Computer-aided diagnosis ,CADx, computer-aided diagnosis ,medicine ,AI, artificial intelligence ,Radiology, Nuclear Medicine and imaging ,business - Published
- 2020
27. Simultaneous detection and characterization of diminutive polyps with the use of artificial intelligence during colonoscopy
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Shin-ei Kudo, Kensaku Mori, Yuichi Mori, and Masashi Misawa
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medicine.medical_specialty ,Narrow-band imaging ,medicine.diagnostic_test ,business.industry ,Gastroenterology ,NBI, narrow-band imaging ,Colonoscopy ,Diminutive ,Tools and Technique ,Medicine ,AI, artificial intelligence ,Radiology, Nuclear Medicine and imaging ,Radiology ,business - Published
- 2019
28. Quantification of COVID-19 Opacities on Chest CT – Evaluation of a Fully Automatic AI-approach to Noninvasively Differentiate Critical Versus Noncritical Patients
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Simon S. Martin, Simon Bernatz, Andreas M. Bucher, L Basten, Sabine Michalik, Thomas J. Vogl, Christian Booz, Christoph Mader, Moritz H. Albrecht, Vitali Koch, Leon D. Grünewald, and Scherwin Mahmoudi
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PHO, Percentage of high opacity ,GTP, Alanine aminotransferase ,HR-CT, High-resolution computer tomography ,HST, Urea ,030218 nuclear medicine & medical imaging ,law.invention ,0302 clinical medicine ,DDI, D-dimers ,law ,LEU, White blood cell count ,Viral ,DI2IN, Deep Image to Image Network ,Lung ,Original Investigation ,COVID-19, Coronavirus disease 2019 ,Predictive marker ,biology ,RT-PCR, Real-time reverse transcription polymerase-chain-reaction ,Middle Aged ,Intensive care unit ,PCT, Procalcitonin ,ICU, Intensive care unit ,medicine.anatomical_structure ,030220 oncology & carcinogenesis ,Cohort ,Absolute neutrophil count ,CRP, C-reactive protein ,CT, Computed tomography ,LAC, Lactate ,LYM, Lymphocyte count ,RIS, Radiology information system ,TNTHS, Troponin ,HU, Hounsfield units ,SARS-CoV-2, Severe acute respiratory syndrome coronavirus type ,WHO, World Health Organization ,03 medical and health sciences ,Artificial Intelligence ,PACS, Picture archiving and communication system ,ARDS, Acute respiratory distress syndrome ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,TPZ, Quick value ,DICOM, Digital Imaging and Communications in Medicine ,IL-6, Interleukin-6 ,THR, Thrombocyte count ,Retrospective Studies ,LDH, Lactate dehydrogenase ,business.industry ,VRT, Volume rendering technique ,SARS-CoV-2 infection ,AI, Artificial intelligence ,KREA, Creatinine ,GGO, Ground-glass opacities ,COVID-19 ,Retrospective cohort study ,Pneumonia ,medicine.disease ,Troponin ,Chest-CT ,BIL, Bilirubin ,biology.protein ,NEU, Neutrophil count ,Nuclear medicine ,business ,Tomography, X-Ray Computed - Abstract
OBJECTIVES: To evaluate the potential of a fully automatic artificial intelligence (AI)-driven computed tomography (CT) software prototype to quantify severity of COVID-19 infection on chest CT in relationship with clinical and laboratory data. METHODS: We retrospectively analyzed 50 patients with laboratory confirmed COVID-19 infection who had received chest CT between March and July 2020. Pulmonary opacifications were automatically evaluated by an AI-driven software and correlated with clinical and laboratory parameters using Spearman-Rho and linear regression analysis. We divided the patients into sub cohorts with or without necessity of intensive care unit (ICU) treatment. Sub cohort differences were evaluated employing Wilcoxon-Mann-Whitney-Test. RESULTS: We included 50 CT examinations (mean age, 57.24 years), of whom 24 (48%) had an ICU stay. Extent of COVID-19 like opacities on chest CT showed correlations (all p < 0.001 if not otherwise stated) with occurrence of ICU stay (Râ¯=â¯0.74), length of ICU stay (Râ¯=â¯0.81), lethal outcome (Râ¯=â¯0.56) and length of hospital stay (Râ¯=â¯0.33, p < 0.05). The opacities extent was correlated with laboratory parameters: neutrophil count (NEU) (Râ¯=â¯0.60), lactate dehydrogenase (LDH) (Râ¯=â¯0.60), troponin (TNTHS) (Râ¯=â¯0.55) and c-reactive protein (CRP) (Râ¯=â¯0.51). Differences (p < 0.001) between ICU group and non-ICU group concerned longer length of hospital stay (24.04 vs. 10.92 days), higher opacity score (12.50 vs. 4.96) and severity of laboratory data changes such as c-reactive protein (11.64 vs. 5.07 mg/dl, p < 0.01). CONCLUSIONS: Automatically AI-driven quantification of opacities on chest CT correlates with laboratory and clinical data in patients with confirmed COVID-19 infection and may serve as non-invasive predictive marker for clinical course of COVID-19.
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- 2021
29. Artificial intelligence-based computer-aided diagnosis system supports diagnosis of lymph node metastasis in esophageal squamous cell carcinoma: A multicenter study.
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Zhang ST, Wang SY, Zhang J, Dong D, Mu W, Xia XE, Fu FF, Lu YN, Wang S, Tang ZC, Li P, Qu JR, Wang MY, Tian J, and Liu JH
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Background: This study aimed to develop an artificial intelligence-based computer-aided diagnosis system (AI-CAD) emulating the diagnostic logic of radiologists for lymph node metastasis (LNM) in esophageal squamous cell carcinoma (ESCC) patients, which contributed to clinical treatment decision-making., Methods: A total of 689 ESCC patients with PET/CT images were enrolled from three hospitals and divided into a training cohort and two external validation cohorts. 452 CT images from three publicly available datasets were also included for pretraining the model. Anatomic information from CT images was first obtained automatically using a U-Net-based multi-organ segmentation model, and metabolic information from PET images was subsequently extracted using a gradient-based approach. AI-CAD was developed in the training cohort and externally validated in two validation cohorts., Results: The AI-CAD achieved an accuracy of 0.744 for predicting pathological LNM in the external cohort and a good agreement with a human expert in two external validation cohorts (kappa = 0.674 and 0.587, p < 0.001). With the aid of AI-CAD, the human expert's diagnostic performance for LNM was significantly improved (accuracy [95% confidence interval]: 0.712 [0.669-0.758] vs. 0.833 [0.797-0.865], specificity [95% confidence interval]: 0.697 [0.636-0.753] vs. 0.891 [0.851-0.928]; p < 0.001) among patients underwent lymphadenectomy in the external validation cohorts., Conclusions: The AI-CAD could aid in preoperative diagnosis of LNM in ESCC patients and thereby support clinical treatment decision-making., Competing Interests: The authors declare no competing interests., (© 2023 The Authors.)
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- 2023
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30. Automated pancreatic islet viability assessment for transplantation using bright-field deep morphological signature.
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Habibalahi A, Campbell JM, Walters SN, Mahbub SB, Anwer AG, Grey ST, and Goldys EM
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Islets transplanted for type-1 diabetes have their viability reduced by warm ischemia, dimethyloxalylglycine (DMOG; hypoxia model), oxidative stress and cytokine injury. This results in frequent transplant failures and the major burden of patients having to undergo multiple rounds of treatment for insulin independence. Presently there is no reliable measure to assess islet preparation viability prior to clinical transplantation. We investigated deep morphological signatures (DMS) for detecting the exposure of islets to viability compromising insults from brightfield images. Accuracies ranged from 98 % to 68 % for; ROS damage, pro-inflammatory cytokines, warm ischemia and DMOG. When islets were disaggregated to single cells to enable higher throughput data collection, good accuracy was still obtained (83-71 %). Encapsulation of islets reduced accuracy for cytokine exposure, but it was still high (78 %). Unsupervised modelling of the DMS for islet preparations transplanted into a syngeneic mouse model was able to predict whether or not they would restore glucose control with 100 % accuracy. Our strategy for constructing DMS' is effective for the assessment of islet pre-transplant viability. If translated into the clinic, standard equipment could be used to prospectively identify non-functional islet preparations unable to contribute to the restoration of glucose control and reduce the burden of unsuccessful treatments., Competing Interests: No conflict of interest., (© 2023 The Authors.)
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- 2023
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31. Algorithms for automated diagnosis of cardiovascular diseases based on ECG data: A comprehensive systematic review.
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Denysyuk HV, Pinto RJ, Silva PM, Duarte RP, Marinho FA, Pimenta L, Gouveia AJ, Gonçalves NJ, Coelho PJ, Zdravevski E, Lameski P, Leithardt V, Garcia NM, and Pires IM
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The prevalence of cardiovascular diseases is increasing around the world. However, the technology is evolving and can be monitored with low-cost sensors anywhere at any time. This subject is being researched, and different methods can automatically identify these diseases, helping patients and healthcare professionals with the treatments. This paper presents a systematic review of disease identification, classification, and recognition with ECG sensors. The review was focused on studies published between 2017 and 2022 in different scientific databases, including PubMed Central, Springer, Elsevier, Multidisciplinary Digital Publishing Institute (MDPI), IEEE Xplore, and Frontiers. It results in the quantitative and qualitative analysis of 103 scientific papers. The study demonstrated that different datasets are available online with data related to various diseases. Several ML/DP-based models were identified in the research, where Convolutional Neural Network and Support Vector Machine were the most applied algorithms. This review can allow us to identify the techniques that can be used in a system that promotes the patient's autonomy., Competing Interests: The authors declare no competing interests., (© 2023 The Authors.)
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- 2023
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32. Development of a tongue image-based machine learning tool for the diagnosis of gastric cancer: a prospective multicentre clinical cohort study.
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Yuan L, Yang L, Zhang S, Xu Z, Qin J, Shi Y, Yu P, Wang Y, Bao Z, Xia Y, Sun J, He W, Chen T, Chen X, Hu C, Zhang Y, Dong C, Zhao P, Wang Y, Jiang N, Lv B, Xue Y, Jiao B, Gao H, Chai K, Li J, Wang H, Wang X, Guan X, Liu X, Zhao G, Zheng Z, Yan J, Yu H, Chen L, Ye Z, You H, Bao Y, Cheng X, Zhao P, Wang L, Zeng W, Tian Y, Chen M, You Y, Yuan G, Ruan H, Gao X, Xu J, Xu H, Du L, Zhang S, Fu H, and Cheng X
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Background: Tongue images (the colour, size and shape of the tongue and the colour, thickness and moisture content of the tongue coating), reflecting the health state of the whole body according to the theory of traditional Chinese medicine (TCM), have been widely used in China for thousands of years. Herein, we investigated the value of tongue images and the tongue coating microbiome in the diagnosis of gastric cancer (GC)., Methods: From May 2020 to January 2021, we simultaneously collected tongue images and tongue coating samples from 328 patients with GC (all newly diagnosed with GC) and 304 non-gastric cancer (NGC) participants in China, and 16 S rDNA was used to characterize the microbiome of the tongue coating samples. Then, artificial intelligence (AI) deep learning models were established to evaluate the value of tongue images and the tongue coating microbiome in the diagnosis of GC. Considering that tongue imaging is more convenient and economical as a diagnostic tool, we further conducted a prospective multicentre clinical study from May 2020 to March 2022 in China and recruited 937 patients with GC and 1911 participants with NGC from 10 centres across China to further evaluate the role of tongue images in the diagnosis of GC. Moreover, we verified this approach in another independent external validation cohort that included 294 patients with GC and 521 participants with NGC from 7 centres. This study is registered at ClinicalTrials.gov, NCT01090362., Findings: For the first time, we found that both tongue images and the tongue coating microbiome can be used as tools for the diagnosis of GC, and the area under the curve (AUC) value of the tongue image-based diagnostic model was 0.89. The AUC values of the tongue coating microbiome-based model reached 0.94 using genus data and 0.95 using species data. The results of the prospective multicentre clinical study showed that the AUC values of the three tongue image-based models for GCs reached 0.88-0.92 in the internal verification and 0.83-0.88 in the independent external verification, which were significantly superior to the combination of eight blood biomarkers., Interpretation: Our results suggest that tongue images can be used as a stable method for GC diagnosis and are significantly superior to conventional blood biomarkers. The three kinds of tongue image-based AI deep learning diagnostic models that we developed can be used to adequately distinguish patients with GC from participants with NGC, even early GC and precancerous lesions, such as atrophic gastritis (AG)., Funding: The National Key R&D Program of China (2021YFA0910100), Program of Zhejiang Provincial TCM Sci-tech Plan (2018ZY006), Medical Science and Technology Project of Zhejiang Province (2022KY114, WKJ-ZJ-2104), Zhejiang Provincial Research Center for Upper Gastrointestinal Tract Cancer (JBZX-202006), Natural Science Foundation of Zhejiang Province (HDMY22H160008), Science and Technology Projects of Zhejiang Province (2019C03049), National Natural Science Foundation of China (82074245, 81973634, 82204828), and Chinese Postdoctoral Science Foundation (2022M713203)., Competing Interests: All authors declare no competing interests., (© 2023 The Author(s).)
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- 2023
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33. Artificial intelligence to predict outcomes of head and neck radiotherapy.
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Bang C, Bernard G, Le WT, Lalonde A, Kadoury S, and Bahig H
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Head and neck radiotherapy induces important toxicity, and its efficacy and tolerance vary widely across patients. Advancements in radiotherapy delivery techniques, along with the increased quality and frequency of image guidance, offer a unique opportunity to individualize radiotherapy based on imaging biomarkers, with the aim of improving radiation efficacy while reducing its toxicity. Various artificial intelligence models integrating clinical data and radiomics have shown encouraging results for toxicity and cancer control outcomes prediction in head and neck cancer radiotherapy. Clinical implementation of these models could lead to individualized risk-based therapeutic decision making, but the reliability of the current studies is limited. Understanding, validating and expanding these models to larger multi-institutional data sets and testing them in the context of clinical trials is needed to ensure safe clinical implementation. This review summarizes the current state of the art of machine learning models for prediction of head and neck cancer radiotherapy outcomes., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2023 The Authors.)
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- 2023
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34. The applications of machine learning to predict the forming of chemically stable amorphous solid dispersions prepared by hot-melt extrusion.
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Jiang J, Lu A, Ma X, Ouyang D, and Williams RO 3rd
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Amorphous solid dispersion (ASD) is one of the most important strategies to improve the solubility and dissolution rate of poorly water-soluble drugs. As a widely used technique to prepare ASDs, hot-melt extrusion (HME) provides various benefits, including a solvent-free process, continuous manufacturing, and efficient mixing compared to solvent-based methods, such as spray drying. Energy input, consisting of thermal and specific mechanical energy, should be carefully controlled during the HME process to prevent chemical degradation and residual crystallinity. However, a conventional ASD development process uses a trial-and-error approach, which is laborious and time-consuming. In this study, we have successfully built multiple machine learning (ML) models to predict the amorphization of crystalline drug formulations and the chemical stability of subsequent ASDs prepared by the HME process. We utilized 760 formulations containing 49 active pharmaceutical ingredients (APIs) and multiple types of excipients. By evaluating the built ML models, we found that ECFP-LightGBM was the best model to predict amorphization with an accuracy of 92.8%. Furthermore, ECFP-XGBoost was the best in estimating chemical stability with an accuracy of 96.0%. In addition, the feature importance analyses based on SHapley Additive exPlanations (SHAP) and information gain (IG) revealed that several processing parameters and material attributes (i.e., drug loading, polymer ratio, drug's Extended-connectivity fingerprints (ECFP) fingerprints, and polymer's properties) are critical for achieving accurate predictions for the selected models. Moreover, important API's substructures related to amorphization and chemical stability were determined, and the results are largely consistent with the literature. In conclusion, we established the ML models to predict formation of chemically stable ASDs and identify the critical attributes during HME processing. Importantly, the developed ML methodology has the potential to facilitate the product development of ASDs manufactured by HME with a much reduced human workload., Competing Interests: The authors declare no financial interests/personal relationships that may be considered as potential competing interests., (© 2023 The Authors.)
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- 2023
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35. Deep learning-based automatic left atrial appendage filling defects assessment on cardiac computed tomography for clinical and subclinical atrial fibrillation patients.
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Chen L, Huang SH, Wang TH, Lan TY, Tseng VS, Tsao HM, Wang HH, and Tang GJ
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Rationale and Objectives: Selecting region of interest (ROI) for left atrial appendage (LAA) filling defects assessment can be time consuming and prone to subjectivity. This study aimed to develop and validate a novel artificial intelligence (AI), deep learning (DL) based framework for automatic filling defects assessment on CT images for clinical and subclinical atrial fibrillation (AF) patients., Materials and Methods: A total of 443,053 CT images were used for DL model development and testing. Images were analyzed by the AI framework and expert cardiologists/radiologists. The LAA segmentation performance was evaluated using Dice coefficient. The agreement between manual and automatic LAA ROI selections was evaluated using intraclass correlation coefficient (ICC) analysis. Receiver operating characteristic (ROC) curve analysis was used to assess filling defects based on the computed LAA to ascending aorta Hounsfield unit (HU) ratios., Results: A total of 210 patients (Group 1: subclinical AF, n = 105; Group 2: clinical AF with stroke, n = 35; Group 3: AF for catheter ablation, n = 70) were enrolled. The LAA volume segmentation achieved 0.931-0.945 Dice scores. The LAA ROI selection demonstrated excellent agreement (ICC ≥0.895, p < 0.001) with manual selection on the test sets. The automatic framework achieved an excellent AUC score of 0.979 in filling defects assessment. The ROC-derived optimal HU ratio threshold for filling defects detection was 0.561., Conclusion: The novel AI-based framework could accurately segment the LAA region and select ROIs while effectively avoiding trabeculae for filling defects assessment, achieving close-to-expert performance. This technique may help preemptively detect the potential thromboembolic risk for AF patients., Competing Interests: The authors declare no competing interests., (© 2023 The Authors.)
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- 2023
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36. Personalized predictions of adverse side effects of the COVID-19 vaccines.
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Jamshidi E, Asgary A, Kharrazi AY, Tavakoli N, Zali A, Mehrazi M, Jamshidi M, Farrokhi B, Maher A, von Garnier C, Rahi SJ, and Mansouri N
- Abstract
Background: Misconceptions about adverse side effects are thought to influence public acceptance of the Coronavirus disease 2019 (COVID-19) vaccines negatively. To address such perceived disadvantages of vaccines, a novel machine learning (ML) approach was designed to generate personalized predictions of the most common adverse side effects following injection of six different COVID-19 vaccines based on personal and health-related characteristics., Methods: Prospective data of adverse side effects following COVID-19 vaccination in 19943 participants from Iran and Switzerland was utilized. Six vaccines were studied: The AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2, and the mRNA-1273 vaccine. The eight side effects were considered as the model output: fever, fatigue, headache, nausea, chills, joint pain, muscle pain, and injection site reactions. The total input parameters for the first and second dose predictions were 46 and 54 features, respectively, including age, gender, lifestyle variables, and medical history. The performances of multiple ML models were compared using Area Under the Receiver Operating Characteristic Curve (ROC-AUC)., Results: The total number of people receiving the first dose of the AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2, and mRNA-1273 were 6022, 7290, 5279, 802, 277, and 273, respectively. For the second dose, the numbers were 2851, 5587, 3841, 599, 242 and 228. The Logistic Regression model for predicting different side effects of the first dose achieved ROC-AUCs of 0.620-0.686, 0.685-0.716, 0.632-0.727, 0.527-0.598, 0.548-0.655, 0.545-0.712 for the AZD1222, Sputnik V, BBIBP-CorV, COVAXIN, BNT162b2 and mRNA-1273 vaccines, respectively. The second dose models yielded ROC-AUCs of 0.777-0.867, 0.795-0.848, 0.857-0.906, 0.788-0.875, 0.683-0.850, and 0.486-0.680, respectively., Conclusions: Using a large cohort of recipients vaccinated with COVID-19 vaccines, a novel and personalized strategy was established to predict the occurrence of the most common adverse side effects with high accuracy. This technique can serve as a tool to inform COVID-19 vaccine selection and generate personalized factsheets to curb concerns about adverse side effects., (© 2022 The Authors.)
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- 2023
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37. Artificial Intelligence in Hepatology- Ready for the Primetime.
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Kalapala R, Rughwani H, and Reddy DN
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Artificial Intelligence (AI) is a mathematical process of computer mediating designing of algorithms to support human intelligence. AI in hepatology has shown tremendous promise to plan appropriate management and hence improve treatment outcomes. The field of AI is in a very early phase with limited clinical use. AI tools such as machine learning, deep learning, and 'big data ' are in a continuous phase of evolution, presently being applied for clinical and basic research. In this review, we have summarized various AI applications in hepatology, the pitfalls and AI's future implications. Different AI models and algorithms are under study using clinical, laboratory, endoscopic and imaging parameters to diagnose and manage liver diseases and mass lesions. AI has helped to reduce human errors and improve treatment protocols. Further research and validation are required for future use of AI in hepatology., (© 2022 Indian National Association for Study of the Liver. Published by Elsevier B.V. All rights reserved.)
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- 2023
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38. How to avoid future "Covid-19 origins" questions?
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Su Z, McDonnell D, Cheshmehzangi A, Ahmad J, Šegalo S, da Veiga CP, and Xiang YT
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Origins debates regarding Covid-19 are gaining momentum again. In light of the continued infections and deaths of Covid-19 seen in countries rich and poor, rather than focusing the approach with "whodunit", developing solutions that can help societies become better prepared for future pandemics might be a more meaningful way to move forward. In this paper, we propose a solution that could help society better predict and prevent future pandemics. A system could allow humans to anonymously report potential infectious disease outbreaks without fearing backlash or prejudice and could automatically surveil for potential disease transfers or virus leaks. The proposed autonomous and anonymous pandemic reporting and surveillance system has the potential to help health officials locate infectious disease outbreaks before they form into pandemics. And in turn, it better prevents future pandemics and avoids Covid-19 origins debates., (© 2022 Elsevier Masson SAS. All rights reserved.)
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- 2022
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39. Quantitative approaches in clinical reproductive endocrinology.
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Voliotis M, Hanassab S, Abbara A, Heinis T, Dhillo WS, and Tsaneva-Atanasova K
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Understanding the human hypothalamic-pituitary-gonadal (HPG) axis presents a major challenge for medical science. Dysregulation of the HPG axis is linked to infertility and a thorough understanding of its dynamic behaviour is necessary to both aid diagnosis and to identify the most appropriate hormonal interventions. Here, we review how quantitative models are being used in the context of clinical reproductive endocrinology to: 1. analyse the secretory patterns of reproductive hormones; 2. evaluate the effect of drugs in fertility treatment; 3. aid in the personalization of assisted reproductive technology (ART). In this review, we demonstrate that quantitative models are indispensable tools enabling us to describe the complex dynamic behaviour of the reproductive axis, refine the treatment of fertility disorders, and predict clinical intervention outcomes., Competing Interests: Nothing declared., (© 2022 The Author(s).)
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- 2022
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40. Radiology indispensable for tracking COVID-19
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Jingwen Li, Xi Long, Xuefei Lv, Shaoping Hu, Xinyi Wang, Zhicheng Lin, Fang Fang, Nian Xiong, Yu Sun, and Dandan Zhang
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Male ,Artificial intelligence ,SARS, Severe acute respiratory syndrome ,MRI, Magnetic resonance imaging ,Review ,030218 nuclear medicine & medical imaging ,HRCT, High-resolution CT ,0302 clinical medicine ,Pregnancy ,Risk Factors ,Mass Screening ,PET/CT, Positron emission computed tomography ,Stage (cooking) ,Child ,Tomography ,medicine.diagnostic_test ,Radiological and Ultrasound Technology ,General Medicine ,Positron emission tomography computed tomography ,Radiology Nuclear Medicine and imaging ,030220 oncology & carcinogenesis ,Radiological weapon ,CT, Computed tomography ,Female ,Radiology ,medicine.medical_specialty ,Patient Identification Systems ,Isolation (health care) ,Coronavirus disease 2019 (COVID-19) ,Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) ,X-ray computed ,Thoracic Imaging ,03 medical and health sciences ,Magnetic resonance imaging ,UTE, Ultrashort echo-time ,GGO, Ground-glass opacity ,medicine ,COVID-19, Novel coronavirus disease 2019 ,Humans ,Radiology, Nuclear Medicine and imaging ,RT-PCR, Reverse transcription-polymerase chain reaction ,business.industry ,AI, Artificial intelligence ,COVID-19 ,Gold standard (test) ,medicine.disease ,Pneumonia ,Early Diagnosis ,Positron-Emission Tomography ,business ,Tomography, X-Ray Computed ,18F-FDG, β-2-[18 F]-Fluoro-2-deoxy-D-glucose - Abstract
Highlights • Currently, chest computed tomography is recommended as the first-line imaging test for detecting COVID-19 pneumonia. • The most typical CT imaging finding of COVID-19 patients is ground-glass opacity, combined with reticular and/or interlobular septal thickening and consolidation. • CT is useful for monitoring patients with COVID-19, identifying associated vascular abnormalities and making differential diagnosis., With the rapid spread of COVID-19 worldwide, early detection and efficient isolation of suspected patients are especially important to prevent the transmission. Although nucleic acid testing of SARS-CoV-2 is still the gold standard for diagnosis, there are well-recognized early-detection problems including time-consuming in the diagnosis process, noticeable false-negative rate in the early stage and lacking nucleic acid testing kits in some areas. Therefore, effective and rational applications of imaging technologies are critical in aiding the screen and helping the diagnosis of suspected patients. Currently, chest computed tomography is recommended as the first-line imaging test for detecting COVID-19 pneumonia, which could allow not only early detection of the typical chest manifestations, but also timely estimation of the disease severity and therapeutic effects. In addition, other radiological methods including chest X-ray, magnetic resonance imaging, and positron emission computed tomography also show significant advantages in the detection of COVID-19 pneumonia. This review summarizes the applications of radiology and nuclear medicine in detecting and diagnosing COVID-19. It highlights the importance for these technologies to curb the rapid transmission during the pandemic, considering findings from special groups such as children and pregnant women.
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- 2021
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41. Using artificial intelligence to risk stratify COVID-19 patients based on chest X-ray findings
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Diego A. Hipolito Canario, Eric Fromke, Matthew A. Patetta, Mohamed T. Eltilib, Juan P. Reyes-Gonzalez, Georgina Cornelio Rodriguez, Valeria A. Fusco Cornejo, Seymour Duncker, and Jessica K. Stewart
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Artificial intelligence ,CXR, chest x-rays ,COVID-19, coronavirus disease of 2019 ,Chest X-ray ,Medicine (miscellaneous) ,COVID-19 ,Patient risk stratification ,Health Informatics ,AI, artificial intelligence ,Deep learning algorithm ,M-qXR, modified qXR deep learning algorithm ,Article ,Computer Science Applications - Abstract
Background Deep learning-based radiological image analysis could facilitate use of chest x-rays as a triaging tool for COVID-19 diagnosis in resource-limited settings. This study sought to determine whether a modified commercially available deep learning algorithm (M-qXR) could risk stratify patients with suspected COVID-19 infections. Methods A dual track clinical validation study was designed to assess the clinical accuracy of M-qXR. The algorithm evaluated all Chest-X-rays (CXRs) performed during the study period for abnormal findings and assigned a COVID-19 risk score. Four independent radiologists served as radiological ground truth. The M-qXR algorithm output was compared against radiological ground truth and summary statistics for prediction accuracy were calculated. In addition, patients who underwent both PCR testing and CXR for suspected COVID-19 infection were included in a co-occurrence matrix to assess the sensitivity and specificity of the M-qXR algorithm. Results 625 CXRs were included in the clinical validation study. 98% of total interpretations made by M-qXR agreed with ground truth (p = 0.25). M-qXR correctly identified the presence or absence of pulmonary opacities in 94% of CXR interpretations. M-qXR's sensitivity, specificity, PPV, and NPV for detecting pulmonary opacities were 94%, 95%, 99%, and 88% respectively. M-qXR correctly identified the presence or absence of pulmonary consolidation in 88% of CXR interpretations (p = 0.48). M-qXR's sensitivity, specificity, PPV, and NPV for detecting pulmonary consolidation were 91%, 84%, 89%, and 86% respectively. Furthermore, 113 PCR-confirmed COVID-19 cases were used to create a co-occurrence matrix between M-qXR's COVID-19 risk score and COVID-19 PCR test results. The PPV and NPV of a medium to high COVID-19 risk score assigned by M-qXR yielding a positive COVID-19 PCR test result was estimated to be 89.7% and 80.4% respectively. Conclusion M-qXR was found to have comparable accuracy to radiological ground truth in detecting radiographic abnormalities on CXR suggestive of COVID-19.
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- 2021
42. Multi-Radiologist User Study for Artificial Intelligence-Guided Grading of COVID-19 Lung Disease Severity on Chest Radiographs
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Jo-Anne O. Shepard, Michael H. Lev, Marc D. Succi, Brent P. Little, Tarik K. Alkasab, Jayashree Kalpathy-Cramer, Matthew D. Li, and Dexter P. Mendoza
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medicine.medical_specialty ,Artificial intelligence ,Computer-assisted diagnosis ,medicine.medical_treatment ,Radiography ,education ,Fleiss' kappa ,Severity of Illness Index ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Radiologists ,Severity of illness ,medicine ,Humans ,Intubation ,Radiology, Nuclear Medicine and imaging ,Lung ,PXS, Pulmonary x-ray severity ,Retrospective Studies ,COVID-19, Coronavirus disease 2019 ,medicine.diagnostic_test ,SARS-CoV-2 ,business.industry ,CXR, Chest x-ray ,AI, Artificial intelligence ,COVID-19 ,Retrospective cohort study ,Exact test ,Inter-rater reliability ,Chest radiograph ,Radiology Nuclear Medicine and imaging ,030220 oncology & carcinogenesis ,Preliminary Investigation ,Radiography, Thoracic ,Radiology ,business - Abstract
Rationale and Objectives Radiographic findings of COVID-19 pneumonia can be used for patient risk stratification; however, radiologist reporting of disease severity is inconsistent on chest radiographs (CXRs). We aimed to see if an artificial intelligence (AI) system could help improve radiologist interrater agreement. Materials and Methods We performed a retrospective multi-radiologist user study to evaluate the impact of an AI system, the PXS score model, on the grading of categorical COVID-19 lung disease severity on 154 chest radiographs into four ordinal grades (normal/minimal, mild, moderate, and severe). Four radiologists (two thoracic and two emergency radiologists) independently interpreted 154 CXRs from 154 unique patients with COVID-19 hospitalized at a large academic center, before and after using the AI system (median washout time interval was 16 days). Three different thoracic radiologists assessed the same 154 CXRs using an updated version of the AI system trained on more imaging data. Radiologist interrater agreement was evaluated using Cohen and Fleiss kappa where appropriate. The lung disease severity categories were associated with clinical outcomes using a previously published outcomes dataset using Fisher's exact test and Chi-square test for trend. Results Use of the AI system improved radiologist interrater agreement (Fleiss κ = 0.40 to 0.66, before and after use of the system). The Fleiss κ for three radiologists using the updated AI system was 0.74. Severity categories were significantly associated with subsequent intubation or death within 3 days. Conclusion An AI system used at the time of CXR study interpretation can improve the interrater agreement of radiologists.
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- 2021
43. Role of deep learning in early detection of COVID-19: Scoping review
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Haider Dhia Zubaydi, Mahmood Saleh Alzubaidi, Alaa Abd-Alrazaq, Ali Abdulqader Bin-Salem, Mowafa Househ, and Arfan Ahmed
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CNN, Convolutional neural network ,Coronavirus disease 2019 (COVID-19) ,Computer science ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Convolutional neural network ,Article ,WHO, World Health Organization ,Domain (software engineering) ,COVID-19, Corona Virus 2019 ,Health care ,Machine learning ,business.industry ,AI, Artificial intelligence ,DL, Deep Learning ,Deep learning ,ULS, Ultrasonography ,CXR, Chest X-Ray radiography ,COVID-19 ,CT, Computed Tomography ,Data science ,Coronavirus ,RNN, Recurrent Neural Network ,SARS-CoV-2, Severe Acute Respiratory Syndrome Coronavirus 2 ,Data extraction ,Scale (social sciences) ,Artificial intelligence ,business ,Transfer of learning ,General Economics, Econometrics and Finance - Abstract
Background Since the onset of the COVID-19 pandemic, the world witnessed disruption on an unprecedented scale affecting our daily lives including but not limited to healthcare, business, education, and transportation. Deep Learning (DL) is a branch of Artificial intelligence (AI) applications, the recent growth of DL includes features that could be helpful in fighting the COVID-19 pandemic. Utilizing such features could support public health efforts. Objective Investigate the literature available in the use of DL technology to support dealing with the COVID-19 crisis. We summarize the literature that uses DL features to analyze datasets for the purpose of a quick COVID-19 detection. Methods This review follows PRISMA Extension for Scoping Reviews (PRISMA-ScR). We have scanned the most two commonly used databases (IEEE, ACM). Search terms were identified based on the target intervention (DL) and the target population (COVID-19). Two authors independently handled study selection and one author assigned for data extraction. A narrative approach is used to synthesize the extracted data. Results We retrieved 53 studies and after passing through PRISMA excluding criteria, only 17 studies are considered in this review. All studies used deep learning for detection of COVID-19 cases in early stage based on different diagnostic modalities. Convolutional Neural Network (CNN) and Transfer Learning (TL) were the most commonly used techniques. Conclusion The included studies showed that DL techniques has significant impact on early detection of COVID-19 with high accuracy rate. However, most of the proposed methods are still in development and not tested in a clinical setting. Further investigation and collaboration are required from the research community and healthcare professionals in order to develop and standardize guidelines for use of DL in the healthcare domain.
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- 2021
44. Dual energy imaging in cardiothoracic pathologies: A primer for radiologists and clinicians
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Robert C. Gilkeson, Kaustav Bera, Elias Kikano, Simon Lennartz, Sachin S Saboo, Dhiraj Baruah, Amit Gupta, Ali Gholamrezanezhad, Nils Große Hokamp, and Kai Roman Laukamp
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medicine.medical_specialty ,PCD, photon-counting detector ,Radiography ,R895-920 ,VMI, virtual mono-energetic images ,Single-photon emission computed tomography ,Article ,PET, positron emission tomography ,SVC, superior vena cava ,030218 nuclear medicine & medical imaging ,DECT, dual-energy computed tomography ,03 medical and health sciences ,Medical physics. Medical radiology. Nuclear medicine ,0302 clinical medicine ,Picture archiving and communication system ,VNC, virtual non-contrast images ,BT, blalock-taussig ,Dual energy CT ,medicine ,Dual energy radiography ,Radiology, Nuclear Medicine and imaging ,Computed radiography ,PACS, picture archiving and communication system ,medicine.diagnostic_test ,business.industry ,Photoelectric effect ,SNR, signal to noise ratio ,DESR, dual-energy subtraction radiography ,eGFR, estimated glomerular filtration rate ,Subtraction ,Digital Enhanced Cordless Telecommunications ,Dual-Energy Computed Tomography ,CR, computed radiography ,TNC, true non contrast ,NIH, national institute of health ,CAD, computer-aided detection ,PPV, positive predictive value ,NPV, negative predictive value ,Positron emission tomography ,030220 oncology & carcinogenesis ,SPECT, single photon emission computed tomography ,TAVI, transcatheter aortic valve implantation ,AI, artificial intelligence ,Radiology ,keV, kilo electron volt ,business ,kV, kilo volt - Abstract
Recent advances in dual-energy imaging techniques, dual-energy subtraction radiography (DESR) and dual-energy CT (DECT), offer new and useful additional information to conventional imaging, thus improving assessment of cardiothoracic abnormalities. DESR facilitates detection and characterization of pulmonary nodules. Other advantages of DESR include better depiction of pleural, lung parenchymal, airway and chest wall abnormalities, detection of foreign bodies and indwelling devices, improved visualization of cardiac and coronary artery calcifications helping in risk stratification of coronary artery disease, and diagnosing conditions like constrictive pericarditis and valvular stenosis. Commercially available DECT approaches are classified into emission based (dual rotation/spin, dual source, rapid kilovoltage switching and split beam) and detector-based (dual layer) systems. DECT provide several specialized image reconstructions. Virtual non-contrast images (VNC) allow for radiation dose reduction by obviating need for true non contrast images, low energy virtual mono-energetic images (VMI) boost contrast enhancement and help in salvaging otherwise non-diagnostic vascular studies, high energy VMI reduce beam hardening artifacts from metallic hardware or dense contrast material, and iodine density images allow quantitative and qualitative assessment of enhancement/iodine distribution. The large amount of data generated by DECT can affect interpreting physician efficiency but also limit clinical adoption of the technology. Optimization of the existing workflow and streamlining the integration between post-processing software and picture archiving and communication system (PACS) is therefore warranted.
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- 2021
45. Lockdown impacts on residential electricity demand in India: A data-driven and non-intrusive load monitoring study using Gaussian mixture models
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Ramit Debnath, Ronita Bardhan, Ashwin Misra, Tianzhen Hong, Vida Rozite, Michael H. Ramage, Debnath, Ramit [0000-0003-0727-5683], Bardhan, Ronita [0000-0001-5336-4084], Ramage, Michael [0000-0003-2967-7683], and Apollo - University of Cambridge Repository
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Gaussian Mixture Models ,More than 3-bedroom unit ,Multidimensional Scaling ,India ,RM1 ,CDD, Cooling Degree Day ,Management, Monitoring, Policy and Law ,Expectation–Maximisation algorithm ,2-bedroom unit ,NEEM, National Energy End-use Monitoring ,MDS, Multidimensional Scaling ,National Energy End-use Monitoring ,AI, Artificial Intelligence ,1-bedroomunit ,BR2, 2-bedroom unit ,Artificial Intelligence ,WFH ,GMM, Gaussian Mixture Models ,Machine learning ,MDS ,EM, Expectation–Maximisation algorithm ,RM1, 1-room unit ,Non-intrusive Load Monitoring ,GMM ,BR1 ,BR2 ,BR3 ,NEEM ,Energy ,COVID-19 ,M3BR ,1-room unit ,Work-from-home ,HDD, Heating Degree Day ,General Energy ,NILM ,AI ,EM ,3-bedroom unit ,Cooling Degree Day ,Heating Degree Day ,HDD ,BR3, 3-bedroom unit ,M3BR, More than 3-bedroom unit ,Mixture models ,WFH, Work-from-Home ,BR1, 1-bedroomunit ,NILM, Non-intrusive Load Monitoring ,CDD - Abstract
This study evaluates the effect of complete nationwide lockdown in 2020 on residential electricity demand across 13 Indian cities and the role of digitalisation using a public smart meter dataset. We undertake a data-driven approach to explore the energy impacts of work-from-home norms across five dwelling typologies. Our methodology includes climate correction, dimensionality reduction and machine learning-based clustering using Gaussian Mixture Models of daily load curves. Results show that during the lockdown, maximum daily peak demand increased by 150-200% as compared to 2018 and 2019 levels for one room-units (RM1), one bedroom-units (BR1) and two bedroom-units (BR2) which are typical for low- and middle-income families. While the upper-middle- and higher-income dwelling units (i.e., three (3BR) and more-than-three bedroom-units (M3BR)) saw night-time demand rise by almost 44% in 2020, as compared to 2018 and 2019 levels. Our results also showed that new peak demand emerged for the lockdown period for RM1, BR1 and BR2 dwelling typologies. We found that the lack of supporting socioeconomic and climatic data can restrict a comprehensive analysis of demand shocks using similar public datasets, which informed policy implications for India's digitalisation. We further emphasised improving the data quality and reliability for effective data-centric policymaking.
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- 2022
46. Long-COVID diagnosis: From diagnostic to advanced AI-driven models
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Riccardo Cau, Gavino Faa, Valentina Nardi, Antonella Balestrieri, Josep Puig, Jasjit S Suri, Roberto SanFilippo, and Luca Saba
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SARS-CoV-2 ,AI, Artificial intelligence ,DL, Deep Learning ,MERS, Middle East respiratory syndrome ,“AI ,COVID-19 ,“Long-COVID ,General Medicine ,“COVID-19 ,“SARS-COV2 ,Article ,CT, computed tomography ,ICU, Intensive care unit ,Post-Acute COVID-19 Syndrome ,Artificial Intelligence ,CMR, cardiac magnetic resonance ,ML, Machine Learning ,DM, diabetes mellitus ,Humans ,RNA, Viral ,Radiology, Nuclear Medicine and imaging ,CTA, computed tomography angiography ,COVID-19, coronavirus disease 2019 - Abstract
SARS-COV 2 is recognized to be responsible for a multi-organ syndrome. In most patients, symptoms are mild. However, in certain subjects, COVID-19 tends to progress more severely. Most of the patients infected with SARS-COV2 fully recovered within some weeks. In a considerable number of patients, like many other viral infections, various long-lasting symptoms have been described, now defined as “long COVID-19 syndrome”. Given the high number of contagious over the world, it is necessary to understand and comprehend this emerging pathology to enable early diagnosis and improve patents outcomes. In this scenario, AI-based models can be applied in long-COVID-19 patients to assist clinicians and at the same time, to reduce the considerable impact on the care and rehabilitation unit. The purpose of this manuscript is to review different aspects of long-COVID-19 syndrome from clinical presentation to diagnosis, highlighting the considerable impact that AI can have.
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- 2022
47. Coronavirus Disease 2019 (COVID-19) diagnostic technologies: A country-based retrospective analysis of screening and containment procedures during the first wave of the pandemic
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Brandon K.K. Fields, Ali Gholamrezanezhad, and Natalie L. Demirjian
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Disease ,medicine.disease_cause ,Global Health ,Polymerase Chain Reaction ,US, United States ,030218 nuclear medicine & medical imaging ,0302 clinical medicine ,COVID-19 Testing ,Pandemic ,Global health ,Mass Screening ,Cardiothoracic Imaging ,Coronavirus ,CT, computed tomography ,Europe ,Radiology Nuclear Medicine and imaging ,030220 oncology & carcinogenesis ,COVID-19, Coronavirus Disease 2019 ,Workforce ,AI, artificial intelligence ,Coronavirus Infections ,Radiology ,medicine.medical_specialty ,Asia ,Middle East respiratory syndrome coronavirus ,Pneumonia, Viral ,RT-PCR ,WHO, World Health Organization ,03 medical and health sciences ,Betacoronavirus ,RT-PCR, reverse transcription polymerase chain reaction ,Chest CT ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Intensive care medicine ,Pandemics ,Machine-learning ,Retrospective Studies ,business.industry ,Clinical Laboratory Techniques ,SARS-CoV-2 ,COVID-19 ,Retrospective cohort study ,Pneumonia ,medicine.disease ,SARS-CoV-2, Severe Acute Respiratory Syndrome Coronavirus 2 ,Communicable Disease Control ,North America ,business ,Tomography, X-Ray Computed - Abstract
Since first report of a novel coronavirus in December of 2019, the Coronavirus Disease 2019 (COVID-19) pandemic has crippled healthcare systems around the world. While many initial screening protocols centered around laboratory detection of the virus, early testing assays were thought to be poorly sensitive in comparison to chest computed tomography, especially in asymptomatic disease. Coupled with shortages of reverse transcription polymerase chain reaction (RT-PCR) testing kits in many parts of the world, these regions instead turned to the use of advanced imaging as a first-line screening modality. However, in contrast to previous Severe Acute Respiratory Syndrome and Middle East Respiratory Syndrome coronavirus epidemics, chest X-ray has not demonstrated optimal sensitivity to be of much utility in first-line screening protocols. Though current national and international guidelines recommend for the use of RT-PCR as the primary screening tool for suspected cases of COVID-19, institutional and regional protocols must consider local availability of resources when issuing universal recommendations. Successful containment and social mitigation strategies worldwide have been thus far predicated on unified governmental responses, though the underlying ideologies of these practices may not be widely applicable in many Western nations. As the strain on the radiology workforce continues to mount, early results indicate a promising role for the use of machine-learning algorithms as risk stratification schema in the months to come., Highlights • Screening protocols must consider subspecialist expertise and time to diagnosis, in addition to diagnostic accuracy. • National and institutional protocols must further consider local availability of resources. • Machine-learning and artificial intelligence algorithms may come to play invaluable roles as risk stratification schema.
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- 2020
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48. New technologies and Amyotrophic Lateral Sclerosis – Which step forward rushed by the COVID-19 pandemic?
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Susana Pinto, Vincenzo Silani, and Stefano Quintarelli
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Artificial intelligence ,MIE, Mechanical insufflator-exsuflattor ,EQoL-5D, European quality of life questionnaire ,LL, Lower limb ,Disease ,AR, Augmented Reality ,Virtual reality ,Health Services Accessibility ,0302 clinical medicine ,BCI, Brain-computer interfaces ,Multidisciplinary approach ,ALS, Amyotrophic Lateral Sclerosis ,Respiratory function ,030212 general & internal medicine ,Amyotrophic lateral sclerosis ,UL, Upper limb ,GDPR, General Data Privacy Regulation ,NEALS, Northeast ALS Consortium ,VR, Virtual Reality ,Cognition ,Robotics ,Telemedicine ,Augmentative and alternative communication ,Neurology ,FVC, Forced vital capacity ,ML, Machine Learning ,Brain-computer interfaces ,Psychology ,AAC, Augmentative and alternative communication ,Emerging technologies ,ECAS, Edinburgh Cognitive and Behavioural ALS Screen ,NIV, Non-invasive ventilation ,Clinical Neurology ,MIP, Maximal inspiratory pressure ,Article ,PLS, Primary lateral sclerosis ,WHO, World Health Organization ,03 medical and health sciences ,QoL, Quality of life ,Inventions ,EU, European Union ,medicine ,Humans ,Pandemics ,Medical education ,AI, Artificial intelligence ,Amyotrophic Lateral Sclerosis ,COVID-19 ,ALSFRS-R, Revised ALS functional rating scale ,ADL, Activities of daily life ,HAD scale, Hospital Anxiety and Depression scale ,pt, patient ,medicine.disease ,ENCALS, European Network for the Cure of ALS ,ET, Eye tracking ,Neurology (clinical) ,Eye-tracking ,030217 neurology & neurosurgery - Abstract
Amyotrophic Lateral Sclerosis (ALS) is a fast-progressive neurodegenerative disease leading to progressive physical immobility with usually normal or mild cognitive and/or behavioural involvement. Many patients are relatively young, instructed, sensitive to new technologies, and professionally active when developing the first symptoms. Older patients usually require more time, encouragement, reinforcement and a closer support but, nevertheless, selecting user-friendly devices, provided earlier in the course of the disease, and engaging motivated carers may overcome many technological barriers. ALS may be considered a model for neurodegenerative diseases to further develop and test new technologies. From multidisciplinary teleconsults to telemonitoring of the respiratory function, telemedicine has the potentiality to embrace other fields, including nutrition, physical mobility, and the interaction with the environment. Brain-computer interfaces and eye tracking expanded the field of augmentative and alternative communication in ALS but their potentialities go beyond communication, to cognition and robotics. Virtual reality and different forms of artificial intelligence present further interesting possibilities that deserve to be investigated. COVID-19 pandemic is an unprecedented opportunity to speed up the development and implementation of new technologies in clinical practice, improving the daily living of both ALS patients and carers. The present work reviews the current technologies for ALS patients already in place or being under evaluation with published publications, prompted by the COVID-19 pandemic., Highlights • ALS is a model to further develop telemedicine and new technologies, being the COVID-19 pandemic an unexpected opportunity to speed up the process. • Telemedicine has already been successfully implemented in some ALS centres, being feasible, safe, with positive cost-benefit aspects. • New technologies especially projected to facilitate ALS patients and carers in communication, mobility, interaction and control of the environment, as well as cognitive assessment are ongoing and many already available • The control of the new technologies by telemedicine will further promote the care to ALS patients. • Legal issues deserve more attention in the near future.
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- 2020
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49. Reliability of multi-purpose offshore-facilities: Present status and future direction in Australia
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Nagi Abdussamie, Al Amin Baksh, Allan Ross Magee, Roquzbeh Abbassi, Jonathan Abrahams, Mark Underwood, Mohsen Asadnia, Chien Ming Wang, Ang Kok Keng, Hassan Karampour, Fatemeh Salehi, Denham G. Cook, Chris Shearer, Scott Draper, Lim Kian Yew, Vikram Garaniya, Irene Penesis, Andrew Martini, Vahid Aryai, Kevin Heasman, and Suba Sivandran
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EMA, Experimental Modal Analysis ,NOAA, USA National Oceanic and Atmospheric Administration ,PE, Polyethylene ,Computer science ,FOWT, Floating offshore wind turbine ,Blue economy ,General Chemical Engineering ,AUV, Autonomous underwater vehicles ,0211 other engineering and technologies ,02 engineering and technology ,HDPE, High-Density Polyethylene ,010501 environmental sciences ,FORM, First Order Reliability Method ,MPOP, Multi-Purpose Offshore-Platforms ,SHM, Structural health monitoring ,01 natural sciences ,Vertical integration ,CSRV, Common source random variables ,GIS, Geographic information system ,LS, Line Sampling ,MEMS, Microelectromechanical systems ,OREDA, Offshore and Onshore Reliability Data database ,WEC, Wave energy converter ,PVC, Polyvinyl Chloride ,QRS, Quantum Resistive Sensors ,Ocean multi-use ,SAFER ,EGRA, Efficient Global Reliability Analysis ,Safety, Risk, Reliability and Quality ,Reliability (statistics) ,NARMAX, Non-linear Auto-Regressive Moving Average with exogenous inputs model ,RSM, Response Surface Method ,MOB, Mobile offshore base ,ROV, Remotely operated vehicles ,PET, Polyethylene terephthalate ,FDD, Frequency Domain Decomposition ,SCADA, Supervisory Control and Data Acquisition ,Renewable energy ,WSE, Wave Swell Energy ,VLFS, Very large floating structure ,OWT, Offshore wind turbine ,Risk analysis (engineering) ,PES, Polyurethane polyester ,CBM, Condition-based monitoring ,MCS, Monte Carlo Simulation ,SS, Subset Simulation ,FMEA, Failure Mode and Effects Analysis ,GI, Galvanised iron ,IS, Importance Sampling ,MFS, Modular floating structures ,Environmental Engineering ,SES, Dragon and Seaweed Energy Solutions ,O&M, Operations and management ,SWAN, Simulating Waves Nearshore ,Article ,FBG, Fibre Bragg Grating ,FLNG, Floating Liquefied Natural Gas ,FPSO, Floating structures for production, storage and offloading ,LH, Latin Hypercube ,OMA, Operational Modal Analysis ,SORM, Second-Order Reliability Method ,Environmental Chemistry ,FE, Finite element ,0105 earth and related environmental sciences ,021110 strategic, defence & security studies ,Government ,Data collection ,AK-, Active Learning ,business.industry ,AI, Artificial intelligence ,PP, Polypropylene ,PSP, Pneumatically Stabilized Platform ,MCS, Reliability Method with integrated Kriging and MCS ,RAMS, Reliability, Availability, Maintainability, and Safety ,ARENA, Australian Renewable Energy Agency ,NWW3, NOAA Wave Watch III ,Structural integrity ,Offshore geotechnical engineering ,Sustainability ,CSIRO, Commonwealth Scientific and Industrial Research Organisation ,business ,Reliability analysis ,Offshore platforms - Abstract
Sustainable use of the ocean for food and energy production is an emerging area of research in different countries around the world. This goal is pursued by the Australian aquaculture, offshore engineering and renewable energy industries, research organisations and the government through the “Blue Economy Cooperative Research Centre”. To address the challenges of offshore food and energy production, leveraging the benefits of co-location, vertical integration, infrastructure and shared services, will be enabled through the development of novel Multi-Purpose Offshore-Platforms (MPOP). The structural integrity of the designed systems when being deployed in the harsh offshore environment is one of the main challenges in developing the MPOPs. Employing structural reliability analysis methods for assessing the structural safety of the novel aquaculture-MPOPs comes with different limitations. This review aims at shedding light on these limitations and discusses the current status and future directions for structural reliability analysis of a novel aquaculture-MPOP considering Australia’s unique environment. To achieve this aim, challenges which exist at different stages of reliability assessment, from data collection and uncertainty quantification to load and structural modelling and reliability analysis implementation, are discussed. Furthermore, several solutions to these challenges are proposed based on the existing knowledge in other sectors, and particularly from the offshore oil and gas industry. Based on the identified gaps in the review process, potential areas for future research are introduced to enable a safer and more reliable operation of the MPOPs.
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- 2020
50. Multi-classifier-based identification of COVID-19 from chest computed tomography using generalizable and interpretable radiomics features
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Jiangdian Song, Lu Wang, Chuanbin Huang, Yulong Tian, Jimmy Zheng, Baoqin Han, Kexue Deng, Safwan Halabi, Wei Zhang, Brendan D. Kelly, Kristen W. Yeom, Hongmei Wang, Edward H. Lee, and Jining Liu
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Adult ,Male ,RMS, original_firstorder_RootMeanSquared ,medicine.medical_specialty ,ROI, region of interest ,Feature extraction ,Linear classifier ,Coronavirus infections ,SARS-CoV-2, severe acute respiratory syndrome coronavirus 2 ,Article ,030218 nuclear medicine & medical imaging ,03 medical and health sciences ,0302 clinical medicine ,Radiomics ,Lasso (statistics) ,Machine learning ,Classifier (linguistics) ,Radiologists ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,COVID-19, coronavirus disease ,Retrospective Studies ,Aged, 80 and over ,LASSO, least absolute shrinkage and selection operator ,business.industry ,SARS-CoV-2 ,KNN, k-nearest neighbour ,COVID-19 ,Pneumonia ,General Medicine ,RT-PCR, Reverse transcriptase polymerase chain reaction ,Middle Aged ,medicine.disease ,Random forest ,RF, random forest ,ROC Curve ,Radiology Nuclear Medicine and imaging ,030220 oncology & carcinogenesis ,Viral pneumonia ,CT, Computed tomography ,AI, artificial intelligence ,Female ,Radiology ,business ,Tomography, X-Ray Computed - Abstract
Highlights • Radiomics-based classifier agreed with radiologists for the classification of COVID-19. • Radiomics enables to quantify the CT variation with SARS-CoV-2 positivity & SARS-CoV-2 negativity. • The features identified by multi-classifier can interpret and generalise the CT signs of COVID-19., Purpose To investigate the efficacy of radiomics in diagnosing patients with coronavirus disease (COVID-19) and other types of viral pneumonia with clinical symptoms and CT signs similar to those of COVID-19. Methods Between 18 January 2020 and 20 May 2020, 110 SARS-CoV-2 positive and 108 SARS-CoV-2 negative patients were retrospectively recruited from three hospitals based on the inclusion criteria. Manual segmentation of pneumonia lesions on CT scans was performed by four radiologists. The latest version of Pyradiomics was used for feature extraction. Four classifiers (linear classifier, k-nearest neighbour, least absolute shrinkage and selection operator [LASSO], and random forest) were used to differentiate SARS-CoV-2 positive and SARS-CoV-2 negative patients. Comparison of the performance of the classifiers and radiologists was evaluated by ROC curve and Kappa score. Results We manually segmented 16,053 CT slices, comprising 32,625 pneumonia lesions, from the CT scans of all patients. Using Pyradiomics, 120 radiomic features were extracted from each image. The key radiomic features screened by different classifiers varied and lead to significant differences in classification accuracy. The LASSO achieved the best performance (sensitivity: 72.2%, specificity: 75.1%, and AUC: 0.81) on the external validation dataset and attained excellent agreement (Kappa score: 0.89) with radiologists (average sensitivity: 75.6%, specificity: 78.2%, and AUC: 0.81). All classifiers indicated that "Original_Firstorder_RootMeanSquared" and "Original_Firstorder_Uniformity" were significant features for this task. Conclusions We identified radiomic features that were significantly associated with the classification of COVID-19 pneumonia using multiple classifiers. The quantifiable interpretation of the differences in features between the two groups extends our understanding of CT imaging characteristics of COVID-19 pneumonia.
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- 2020
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