1,145 results on '"A. Sacchet"'
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2. Principal component analysis as an efficient method for capturing multivariate brain signatures of complex disorders-ENIGMA study in people with bipolar disorders and obesity.
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McWhinney, Sean, Hlinka, Jaroslav, Bakstein, Eduard, Dietze, Lorielle, Corkum, Emily, Abé, Christoph, Alda, Martin, Alexander, Nina, Benedetti, Francesco, Berk, Michael, Bøen, Erlend, Bonnekoh, Linda, Boye, Birgitte, Brosch, Katharina, Canales-Rodríguez, Erick, Cannon, Dara, Dannlowski, Udo, Demro, Caroline, Diaz-Zuluaga, Ana, Elvsåshagen, Torbjørn, Eyler, Lisa, Fortea, Lydia, Fullerton, Janice, Goltermann, Janik, Gotlib, Ian, Grotegerd, Dominik, Haarman, Bartholomeus, Hahn, Tim, Howells, Fleur, Jamalabadi, Hamidreza, Jansen, Andreas, Kircher, Tilo, Klahn, Anna, Kuplicki, Rayus, Lahud, Elijah, Landén, Mikael, Leehr, Elisabeth, Lopez-Jaramillo, Carlos, Mackey, Scott, Malt, Ulrik, Martyn, Fiona, Mazza, Elena, McDonald, Colm, McPhilemy, Genevieve, Meier, Sandra, Meinert, Susanne, Melloni, Elisa, Mitchell, Philip, Nabulsi, Leila, Nenadić, Igor, Nitsch, Robert, Opel, Nils, Ophoff, Roel, Ortuño, Maria, Overs, Bronwyn, Pineda-Zapata, Julian, Pomarol-Clotet, Edith, Radua, Joaquim, Repple, Jonathan, Roberts, Gloria, Rodriguez-Cano, Elena, Sacchet, Matthew, Salvador, Raymond, Savitz, Jonathan, Scheffler, Freda, Schofield, Peter, Schürmeyer, Navid, Shen, Chen, Sim, Kang, Sponheim, Scott, Stein, Dan, Stein, Frederike, Straube, Benjamin, Suo, Chao, Temmingh, Henk, Teutenberg, Lea, Thomas-Odenthal, Florian, Thomopoulos, Sophia, Urosevic, Snezana, Usemann, Paula, van Haren, Neeltje, Vargas, Cristian, Vieta, Eduard, Vilajosana, Enric, Vreeker, Annabel, Winter, Nils, Yatham, Lakshmi, Thompson, Paul, Andreassen, Ole, Ching, Christopher, and Hajek, Tomas
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MRI ,bipolar disorder ,body mass index ,obesity ,principal component analysis ,psychiatry ,Humans ,Bipolar Disorder ,Principal Component Analysis ,Adult ,Female ,Male ,Magnetic Resonance Imaging ,Middle Aged ,Obesity ,Schizophrenia ,Cerebral Cortex ,Cluster Analysis ,Young Adult ,Brain - Abstract
Multivariate techniques better fit the anatomy of complex neuropsychiatric disorders which are characterized not by alterations in a single region, but rather by variations across distributed brain networks. Here, we used principal component analysis (PCA) to identify patterns of covariance across brain regions and relate them to clinical and demographic variables in a large generalizable dataset of individuals with bipolar disorders and controls. We then compared performance of PCA and clustering on identical sample to identify which methodology was better in capturing links between brain and clinical measures. Using data from the ENIGMA-BD working group, we investigated T1-weighted structural MRI data from 2436 participants with BD and healthy controls, and applied PCA to cortical thickness and surface area measures. We then studied the association of principal components with clinical and demographic variables using mixed regression models. We compared the PCA model with our prior clustering analyses of the same data and also tested it in a replication sample of 327 participants with BD or schizophrenia and healthy controls. The first principal component, which indexed a greater cortical thickness across all 68 cortical regions, was negatively associated with BD, BMI, antipsychotic medications, and age and was positively associated with Li treatment. PCA demonstrated superior goodness of fit to clustering when predicting diagnosis and BMI. Moreover, applying the PCA model to the replication sample yielded significant differences in cortical thickness between healthy controls and individuals with BD or schizophrenia. Cortical thickness in the same widespread regional network as determined by PCA was negatively associated with different clinical and demographic variables, including diagnosis, age, BMI, and treatment with antipsychotic medications or lithium. PCA outperformed clustering and provided an easy-to-use and interpret method to study multivariate associations between brain structure and system-level variables. PRACTITIONER POINTS: In this study of 2770 Individuals, we confirmed that cortical thickness in widespread regional networks as determined by principal component analysis (PCA) was negatively associated with relevant clinical and demographic variables, including diagnosis, age, BMI, and treatment with antipsychotic medications or lithium. Significant associations of many different system-level variables with the same brain network suggest a lack of one-to-one mapping of individual clinical and demographic factors to specific patterns of brain changes. PCA outperformed clustering analysis in the same data set when predicting group or BMI, providing a superior method for studying multivariate associations between brain structure and system-level variables.
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- 2024
3. Involving Teachers in Gamified Learning Activities Using Generative Artificial Intelligence Tools
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Fissore, Cecilia, Floris, Francesco, Fradiante, Valeria, Marchisio Conte, Marina, Sacchet, Matteo, Goos, Gerhard, Series Editor, Hartmanis, Juris, Founding Editor, Bertino, Elisa, Editorial Board Member, Gao, Wen, Editorial Board Member, Steffen, Bernhard, Editorial Board Member, Yung, Moti, Editorial Board Member, Schönbohm, Avo, editor, Bellotti, Francesco, editor, Bucchiarone, Antonio, editor, de Rosa, Francesca, editor, Ninaus, Manuel, editor, Wang, Alf, editor, Wanick, Vanissa, editor, and Dondio, Pierpaolo, editor
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- 2025
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4. Example-Generation Tasks for Computer-Aided Assessment in University Mathematics Education: Insights From A Study Conducted in Two Educational Contexts
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Fahlgren, Maria, Barana, Alice, Brunström, Mats, Conte, Marina Marchisio, Roman, Fabio, Sacchet, Matteo, Vinerean, Mirela, and Wondmagegne, Yosief
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- 2024
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5. DenseNet and Support Vector Machine classifications of major depressive disorder using vertex-wise cortical features
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Belov, Vladimir, Erwin-Grabner, Tracy, Zeng, Ling-Li, Ching, Christopher R. K., Aleman, Andre, Amod, Alyssa R., Basgoze, Zeynep, Benedetti, Francesco, Besteher, Bianca, Brosch, Katharina, Bülow, Robin, Colle, Romain, Connolly, Colm G., Corruble, Emmanuelle, Couvy-Duchesne, Baptiste, Cullen, Kathryn, Dannlowski, Udo, Davey, Christopher G., Dols, Annemiek, Ernsting, Jan, Evans, Jennifer W., Fisch, Lukas, Fuentes-Claramonte, Paola, Gonul, Ali Saffet, Gotlib, Ian H., Grabe, Hans J., Groenewold, Nynke A., Grotegerd, Dominik, Hahn, Tim, Hamilton, J. Paul, Han, Laura K. M., Harrison, Ben J, Ho, Tiffany C., Jahanshad, Neda, Jamieson, Alec J., Karuk, Andriana, Kircher, Tilo, Klimes-Dougan, Bonnie, Koopowitz, Sheri-Michelle, Lancaster, Thomas, Leenings, Ramona, Li, Meng, Linden, David E. J., MacMaster, Frank P., Mehler, David M. A., Meinert, Susanne, Melloni, Elisa, Mueller, Bryon A., Mwangi, Benson, Nenadić, Igor, Ojha, Amar, Okamoto, Yasumasa, Oudega, Mardien L., Penninx, Brenda W. J. H., Poletti, Sara, Pomarol-Clotet, Edith, Portella, Maria J., Pozzi, Elena, Radua, Joaquim, Rodríguez-Cano, Elena, Sacchet, Matthew D., Salvador, Raymond, Schrantee, Anouk, Sim, Kang, Soares, Jair C., Solanes, Aleix, Stein, Dan J., Stein, Frederike, Stolicyn, Aleks, Thomopoulos, Sophia I., Toenders, Yara J., Uyar-Demir, Aslihan, Vieta, Eduard, Vives-Gilabert, Yolanda, Völzke, Henry, Walter, Martin, Whalley, Heather C., Whittle, Sarah, Winter, Nils, Wittfeld, Katharina, Wright, Margaret J., Wu, Mon-Ju, Yang, Tony T., Zarate, Carlos, Veltman, Dick J., Schmaal, Lianne, Thompson, Paul M., and Goya-Maldonado, Roberto
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Quantitative Biology - Quantitative Methods ,Computer Science - Machine Learning ,Quantitative Biology - Neurons and Cognition - Abstract
Major depressive disorder (MDD) is a complex psychiatric disorder that affects the lives of hundreds of millions of individuals around the globe. Even today, researchers debate if morphological alterations in the brain are linked to MDD, likely due to the heterogeneity of this disorder. The application of deep learning tools to neuroimaging data, capable of capturing complex non-linear patterns, has the potential to provide diagnostic and predictive biomarkers for MDD. However, previous attempts to demarcate MDD patients and healthy controls (HC) based on segmented cortical features via linear machine learning approaches have reported low accuracies. In this study, we used globally representative data from the ENIGMA-MDD working group containing an extensive sample of people with MDD (N=2,772) and HC (N=4,240), which allows a comprehensive analysis with generalizable results. Based on the hypothesis that integration of vertex-wise cortical features can improve classification performance, we evaluated the classification of a DenseNet and a Support Vector Machine (SVM), with the expectation that the former would outperform the latter. As we analyzed a multi-site sample, we additionally applied the ComBat harmonization tool to remove potential nuisance effects of site. We found that both classifiers exhibited close to chance performance (balanced accuracy DenseNet: 51%; SVM: 53%), when estimated on unseen sites. Slightly higher classification performance (balanced accuracy DenseNet: 58%; SVM: 55%) was found when the cross-validation folds contained subjects from all sites, indicating site effect. In conclusion, the integration of vertex-wise morphometric features and the use of the non-linear classifier did not lead to the differentiability between MDD and HC. Our results support the notion that MDD classification on this combination of features and classifiers is unfeasible.
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- 2023
6. Development of a digital intervention for psychedelic preparation (DIPP)
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McAlpine, Rosalind G., Sacchet, Matthew D., Simonsson, Otto, Khan, Maisha, Krajnovic, Katarina, Morometescu, Larisa, and Kamboj, Sunjeev K.
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- 2024
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7. Multi-site benchmark classification of major depressive disorder using machine learning on cortical and subcortical measures
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Belov, Vladimir, Erwin-Grabner, Tracy, Aghajani, Moji, Aleman, Andre, Amod, Alyssa R., Basgoze, Zeynep, Benedetti, Francesco, Besteher, Bianca, Bülow, Robin, Ching, Christopher R. K., Connolly, Colm G., Cullen, Kathryn, Davey, Christopher G., Dima, Danai, Dols, Annemiek, Evans, Jennifer W., Fu, Cynthia H. Y., Gonul, Ali Saffet, Gotlib, Ian H., Grabe, Hans J., Groenewold, Nynke, Hamilton, J Paul, Harrison, Ben J., Ho, Tiffany C., Mwangi, Benson, Jaworska, Natalia, Jahanshad, Neda, Klimes-Dougan, Bonnie, Koopowitz, Sheri-Michelle, Lancaster, Thomas, Li, Meng, Linden, David E. J., MacMaster, Frank P., Mehler, David M. A., Melloni, Elisa, Mueller, Bryon A., Ojha, Amar, Oudega, Mardien L., Penninx, Brenda W. J. H., Poletti, Sara, Pomarol-Clotet, Edith, Portella, Maria J., Pozzi, Elena, Reneman, Liesbeth, Sacchet, Matthew D., Sämann, Philipp G., Schrantee, Anouk, Sim, Kang, Soares, Jair C., Stein, Dan J., Thomopoulos, Sophia I., Uyar-Demir, Aslihan, van der Wee, Nic J. A., van der Werff, Steven J. A., Völzke, Henry, Whittle, Sarah, Wittfeld, Katharina, Wright, Margaret J., Wu, Mon-Ju, Yang, Tony T., Zarate, Carlos, Veltman, Dick J., Schmaal, Lianne, Thompson, Paul M., and Goya-Maldonado, Roberto
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- 2024
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8. Response to Letter to the Editors “Neurophenomenological Investigation of Mindfulness Meditation “Cessation” Experiences Using EEG Network Analysis in an Intensively Sampled Adept Meditator”
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van Lutterveld, Remko, Chowdhury, Avijit, Ingram, Daniel M., and Sacchet, Matthew D.
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- 2025
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9. Toward a Unified Account of Advanced Concentrative Absorption Meditation: A Systematic Definition and Classification of Jhāna
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Sparby, Terje and Sacchet, Matthew D.
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- 2024
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10. Neurophenomenological Investigation of Mindfulness Meditation “Cessation” Experiences Using EEG Network Analysis in an Intensively Sampled Adept Meditator
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van Lutterveld, Remko, Chowdhury, Avijit, Ingram, Daniel M., and Sacchet, Matthew D.
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- 2024
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11. Altered States of Consciousness are Prevalent and Insufficiently Supported Clinically: A Population Survey
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Wright, Malcolm J., Galante, Julieta, Corneille, Jessica S., Grabovac, Andrea, Ingram, Daniel M., and Sacchet, Matthew D.
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- 2024
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12. Clustering Techniques to Investigate Engagement and Performance in Online Mathematics Courses
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International Association for Development of the Information Society (IADIS), Floris, Francesco, Marchisio, Marina, Roman, Fabio, Sacchet, Matteo, and Rabellino, Sergio
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Among the various kinds of learning analytics emerging especially in the latest decade, clicking patterns cover a prominent role, fostered by their success in analyzing several types of data concerning activity on the web. They can be defined as sets of clicks performed by users, in which every set is treated as the basic unit. Few research has been performed on clicking patterns in educational contexts. In this paper, we perform analysis regarding clicks to an online course in Mathematics, aimed at allowing students to follow courses at a distance, both before and after enrolling at University. We used clustering techniques on students learning behavior, which have been defined for this research as visualizations of activities and resources of the course, to detect differences on students' grade according to their online learning behavior. Our results show that students tend to proceed on the course in both activities and resources. There is no correlation between participation and course grades, even if the most active students show higher scores. Moreover, patterns differ significantly according to the degree program of each student, showing the importance of tailored path.
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- 2022
13. Didactic Activities on Artificial Intelligence: The Perspective of STEM Teachers
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International Association for Development of the Information Society (IADIS), Fissore, Cecilia, Floris, Francesco, Marchisio, Marina, and Sacchet, Matteo
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The concept of Artificial Intelligence (AI) might seem something very distant from the world of schools: a theme that is far from today's reality, especially when the education and training system is committed to tackling the problems associated with the pandemic situation. However, the impact that AI is producing in various areas of our life also requires reflection on the world of education and training. Research and education policies are therefore required to direct education to prepare students for technological challenges, enabling schools and teachers to guide innovation. It is necessary to train teachers not only on the theoretical contents inherent to these themes, but also and above all on the planning of didactic activities to adopt innovative educational approaches. The context of this research is the immersive 3-hour workshop on the theme "Mathematics and AI" which involved 52 teachers from all over Italy from primary to secondary school. The research questions are: What is the current teaching practice in schools in Italy in terms of AI? Which characteristics should be emphasized, and which aspects should be favored in the planning of didactic activities by school teachers? To answer the research questions, we analyzed teachers' responses to the initial questionnaire before the workshop and to the final questionnaire at the end of the workshop. Key findings show that teachers do not treat AI-related topics too much with their classes while being aware of the importance of recognizing and understanding AI.
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- 2022
14. Teaching Mathematics to Non-Mathematics Majors through Problem Solving and New Technologies
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Marchisio, Marina, Remogna, Sara, Roman, Fabio, and Sacchet, Matteo
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The role of mathematics in several scientific disciplines is undisputed; work and everyday life take great advantage of its application. Nevertheless, students often tend to not particularly like it and to consider it of little interest. It is also believed that only people with a certain attitude are capable of mastering the subject. In consideration of this, we aimed to help science students develop mathematical competences by designing a course specifically oriented to applications and problem solving. We administered our course to students attending the first year of a program in biotechnology, asking them to work with technologies instilling curiosity and interest, thus achieving a better proficiency as a consequence. Two questionnaires, along with access and proficiency data, allowed us to collect information about students' attitudes, beliefs, and activity, which we analyzed by means of descriptive statistics. The promotion of the interaction among learners made them active users of the contents, thus allowing for the adaptation of their learning paths according to their personal necessities, as well as the development of teamwork skills and flexibility. Finally, students recognized the usefulness of the problem-solving approach and the role played by software.
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- 2022
15. Teachers' Digital Competences before and during the COVID-19 Pandemic for the Improvement of Security and Defence Higher Education
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Marina Marchisio, Fabio Roman, Matteo Sacchet, Enrico Spinello, Linko Nikolov, Malgorzata Grzelak, Magdalena Rykala, and Cristian-Emil Moldoveanu
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COVID-19 hastened a trend that was already ongoing before the pandemic outbreak: the progressively increasing use of distance and online teaching and learning, alongside with lectures and classes. The potentialities of online teaching allowed a didactic continuity that would have been impossible otherwise, and this approach is likely to be maintained even after COVID-19 related restrictions end. From these remarks, it immediately follows that it is of great importance that teachers, students and other personnel, such as technicians and program managers, possess digital skills devoted to education. In the context of security and defence, areas with a strong international vocation, these skills are even more valuable. This research investigates the impact of COVID-19 on education in these contexts: the changes caused by the pandemic, the teachers' perception about some aspects of their job, such as the way they relate with students, and their ability to perform the same commitments in a different scenario. The research has been conducted based on the analysis of an online anonymous questionnaire with more than 500 responses. Results suggested the importance of the development of a training devoted to improving teachers' digital skills, since they live frontline in education, and they have been directly impacted by disruptive changes. This study is part of the European project Digital Competences for Improving Security and Defence Education - DIGICODE. Pursuing to the Digital Education Action Plan, the project aims at improving education quality in security and defence, by means of digital tools in didactics, and the development of teachers' professional competences. [For the full proceedings, see ED639633.]
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- 2022
16. Development of Digital Competencies in Education Through Staff Training Events and International Schools.
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Marina Marchisio Conte, Fabio Roman, Matteo Sacchet, Enrico Spinello, Daniela Voicu, Magdalena Rykala, and Linko Nikolov
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- 2024
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17. Byron: A Fuzzer for Turing-complete Test Programs.
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Giovanni Squillero, Alberto Tonda, Dimitri Masetta, and Marco Sacchet
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- 2024
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18. From Theory to Training: Exploring Teachers' Attitudes Towards Artificial Intelligence in Education.
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Cecilia Fissore, Francesco Floris, Valeria Fradiante, Marina Marchisio, and Matteo Sacchet
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- 2024
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19. Teacher Training on Artificial Intelligence in Education
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Fissore, Cecilia, Floris, Francesco, Conte, Marina Marchisio, Sacchet, Matteo, Ifenthaler, Dirk, Series Editor, Sampson, Demetrios G., Series Editor, Isaías, Pedro, Series Editor, Gibson, David C., Editorial Board Member, Huang, Ronghuai, Editorial Board Member, Kinshuk, Editorial Board Member, and Spector, J. Michael, Editorial Board Member
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- 2024
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20. Investigating Engagement and Performance in Online Mathematics Courses Using Clustering Techniques
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Floris, Francesco, Conte, Marina Marchisio, Rabellino, Sergio, Roman, Fabio, Sacchet, Matteo, Ifenthaler, Dirk, Series Editor, Sampson, Demetrios G., Series Editor, Isaías, Pedro, Series Editor, Gibson, David C., Editorial Board Member, Huang, Ronghuai, Editorial Board Member, Kinshuk, Editorial Board Member, and Spector, J. Michael, Editorial Board Member
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- 2024
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21. Neuroanatomical dimensions in medication-free individuals with major depressive disorder and treatment response to SSRI antidepressant medications or placebo
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Fu, Cynthia H. Y., Antoniades, Mathilde, Erus, Guray, Garcia, Jose A., Fan, Yong, Arnone, Danilo, Arnott, Stephen R., Chen, Taolin, Choi, Ki Sueng, Fatt, Cherise Chin, Frey, Benicio N., Frokjaer, Vibe G., Ganz, Melanie, Godlewska, Beata R., Hassel, Stefanie, Ho, Keith, McIntosh, Andrew M., Qin, Kun, Rotzinger, Susan, Sacchet, Matthew D., Savitz, Jonathan, Shou, Haochang, Singh, Ashish, Stolicyn, Aleks, Strigo, Irina, Strother, Stephen C., Tosun, Duygu, Victor, Teresa A., Wei, Dongtao, Wise, Toby, Zahn, Roland, Anderson, Ian M., Craighead, W. Edward, Deakin, J. F. William, Dunlop, Boadie W., Elliott, Rebecca, Gong, Qiyong, Gotlib, Ian H., Harmer, Catherine J., Kennedy, Sidney H., Knudsen, Gitte M., Mayberg, Helen S., Paulus, Martin P., Qiu, Jiang, Trivedi, Madhukar H., Whalley, Heather C., Yan, Chao-Gan, Young, Allan H., and Davatzikos, Christos
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- 2024
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22. AI-based dimensional neuroimaging system for characterizing heterogeneity in brain structure and function in major depressive disorder: COORDINATE-MDD consortium design and rationale
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Fu, Cynthia HY, Erus, Guray, Fan, Yong, Antoniades, Mathilde, Arnone, Danilo, Arnott, Stephen R, Chen, Taolin, Choi, Ki Sueng, Fatt, Cherise Chin, Frey, Benicio N, Frokjaer, Vibe G, Ganz, Melanie, Garcia, Jose, Godlewska, Beata R, Hassel, Stefanie, Ho, Keith, McIntosh, Andrew M, Qin, Kun, Rotzinger, Susan, Sacchet, Matthew D, Savitz, Jonathan, Shou, Haochang, Singh, Ashish, Stolicyn, Aleks, Strigo, Irina, Strother, Stephen C, Tosun, Duygu, Victor, Teresa A, Wei, Dongtao, Wise, Toby, Woodham, Rachel D, Zahn, Roland, Anderson, Ian M, Deakin, JF William, Dunlop, Boadie W, Elliott, Rebecca, Gong, Qiyong, Gotlib, Ian H, Harmer, Catherine J, Kennedy, Sidney H, Knudsen, Gitte M, Mayberg, Helen S, Paulus, Martin P, Qiu, Jiang, Trivedi, Madhukar H, Whalley, Heather C, Yan, Chao-Gan, Young, Allan H, and Davatzikos, Christos
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Biological Psychology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Psychology ,Biomedical Imaging ,Neurosciences ,Brain Disorders ,Clinical Research ,Depression ,Bioengineering ,Serious Mental Illness ,Major Depressive Disorder ,Mental Health ,4.1 Discovery and preclinical testing of markers and technologies ,4.2 Evaluation of markers and technologies ,Detection ,screening and diagnosis ,Neurological ,Mental health ,Humans ,Depressive Disorder ,Major ,Prospective Studies ,Reproducibility of Results ,Brain ,Neuroimaging ,Magnetic Resonance Imaging ,Artificial Intelligence ,Classification ,Biomarkers ,Deep learning ,Harmonization ,Predictors ,MRI ,Public Health and Health Services ,Psychiatry ,Clinical sciences ,Epidemiology ,Clinical and health psychology - Abstract
BackgroundEfforts to develop neuroimaging-based biomarkers in major depressive disorder (MDD), at the individual level, have been limited to date. As diagnostic criteria are currently symptom-based, MDD is conceptualized as a disorder rather than a disease with a known etiology; further, neural measures are often confounded by medication status and heterogeneous symptom states.MethodsWe describe a consortium to quantify neuroanatomical and neurofunctional heterogeneity via the dimensions of novel multivariate coordinate system (COORDINATE-MDD). Utilizing imaging harmonization and machine learning methods in a large cohort of medication-free, deeply phenotyped MDD participants, patterns of brain alteration are defined in replicable and neurobiologically-based dimensions and offer the potential to predict treatment response at the individual level. International datasets are being shared from multi-ethnic community populations, first episode and recurrent MDD, which are medication-free, in a current depressive episode with prospective longitudinal treatment outcomes and in remission. Neuroimaging data consist of de-identified, individual, structural MRI and resting-state functional MRI with additional positron emission tomography (PET) data at specific sites. State-of-the-art analytic methods include automated image processing for extraction of anatomical and functional imaging variables, statistical harmonization of imaging variables to account for site and scanner variations, and semi-supervised machine learning methods that identify dominant patterns associated with MDD from neural structure and function in healthy participants.ResultsWe are applying an iterative process by defining the neural dimensions that characterise deeply phenotyped samples and then testing the dimensions in novel samples to assess specificity and reliability. Crucially, we aim to use machine learning methods to identify novel predictors of treatment response based on prospective longitudinal treatment outcome data, and we can externally validate the dimensions in fully independent sites.ConclusionWe describe the consortium, imaging protocols and analytics using preliminary results. Our findings thus far demonstrate how datasets across many sites can be harmonized and constructively pooled to enable execution of this large-scale project.
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- 2023
23. Multi-site benchmark classification of major depressive disorder using machine learning on cortical and subcortical measures
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Belov, Vladimir, Erwin-Grabner, Tracy, Gonul, Ali Saffet, Amod, Alyssa R., Ojha, Amar, Aleman, Andre, Dols, Annemiek, Scharntee, Anouk, Uyar-Demir, Aslihan, Harrison, Ben J, Irungu, Benson M., Besteher, Bianca, Klimes-Dougan, Bonnie, Penninx, Brenda W. J. H., Mueller, Bryon A., Zarate, Carlos, Davey, Christopher G., Ching, Christopher R. K., Connolly, Colm G., Fu, Cynthia H. Y., Stein, Dan J., Dima, Danai, Linden, David E. J., Mehler, David M. A., Pomarol-Clotet, Edith, Pozzi, Elena, Melloni, Elisa, Benedetti, Francesco, MacMaster, Frank P., Grabe, Hans J., Völzke, Henry, Gotlib, Ian H., Soares, Jair C., Evans, Jennifer W., Sim, Kang, Wittfeld, Katharina, Cullen, Kathryn, Reneman, Liesbeth, Oudega, Mardien L., Wright, Margaret J., Portella, Maria J., Sacchet, Matthew D., Li, Meng, Aghajani, Moji, Wu, Mon-Ju, Jaworska, Natalia, Jahanshad, Neda, van der Wee, Nic J. A., Groenewold, Nynke, Hamilton, Paul J., Saemann, Philipp, Bülow, Robin, Poletti, Sara, Whittle, Sarah, Thomopoulos, Sophia I., van, Steven J. A., Werff, der, Koopowitz, Sheri-Michelle, Lancaster, Thomas, Ho, Tiffany C., Yang, Tony T., Basgoze, Zeynep, Veltman, Dick J., Schmaal, Lianne, Thompson, Paul M., and Goya-Maldonado, Roberto
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Quantitative Biology - Quantitative Methods - Abstract
Machine learning (ML) techniques have gained popularity in the neuroimaging field due to their potential for classifying neuropsychiatric disorders. However, the diagnostic predictive power of the existing algorithms has been limited by small sample sizes, lack of representativeness, data leakage, and/or overfitting. Here, we overcome these limitations with the largest multi-site sample size to date (n=5,356) to provide a generalizable ML classification benchmark of major depressive disorder (MDD). Using brain measures from standardized ENIGMA analysis pipelines in FreeSurfer, we were able to classify MDD vs healthy controls (HC) with around 62% balanced accuracy, but when harmonizing the data using ComBat balanced accuracy dropped to approximately 52%. Similar results were observed in stratified groups according to age of onset, antidepressant use, number of episodes and sex. Future studies incorporating higher dimensional brain imaging/phenotype features, and/or using more advanced machine and deep learning methods may achieve more encouraging prospects., Comment: main document 37 pages; supplementary material 24 pages
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- 2022
24. Publisher Correction: Neuroanatomical dimensions in medication-free individuals with major depressive disorder and treatment response to SSRI antidepressant medications or placebo
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Fu, Cynthia H. Y., Antoniades, Mathilde, Erus, Guray, Garcia, Jose A., Fan, Yong, Arnone, Danilo, Arnott, Stephen R., Chen, Taolin, Choi, Ki Sueng, Fatt, Cherise Chin, Frey, Benicio N., Frokjaer, Vibe G., Ganz, Melanie, Godlewska, Beata R., Hassel, Stefanie, Ho, Keith, McIntosh, Andrew M., Qin, Kun, Rotzinger, Susan, Sacchet, Matthew D., Savitz, Jonathan, Shou, Haochang, Singh, Ashish, Stolicyn, Aleks, Strigo, Irina, Strother, Stephen C., Tosun, Duygu, Victor, Teresa A., Wei, Dongtao, Wise, Toby, Zahn, Roland, Anderson, Ian M., Craighead, W. Edward, Deakin, J. F. William, Dunlop, Boadie W., Elliott, Rebecca, Gong, Qiyong, Gotlib, Ian H., Harmer, Catherine J., Kennedy, Sidney H., Knudsen, Gitte M., Mayberg, Helen S., Paulus, Martin P., Qiu, Jiang, Trivedi, Madhukar H., Whalley, Heather C., Yan, Chao-Gan, Young, Allan H., and Davatzikos, Christos
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- 2024
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25. Interactive Feedback for Learning Mathematics in a Digital Learning Environment
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Barana, Alice, Marchisio, Marina, and Sacchet, Matteo
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The COVID-19 pandemic has evidenced a need for tools and methodologies to support students' autonomous learning and the formative assessment practices in distance education contexts, especially for students from challenging backgrounds. This paper proposes a conceptualization of Interactive Feedback (IF) for Mathematics, which is a step-by-step interactive process that guides the learner in the resolution of a task after one or more autonomous tentative. This conceptualization is grounded on theories and models of automatic assessment, formative assessment, and feedback. We discuss the effectiveness of the IF for engaging students from low socio-economic contexts in closing the gap between current and reference performance through a didactic experimentation involving 299 Italian students in grade 8. Using quantitative analyses on data from the automatic assessment, we compared the results of the first and last attempts in activities with and without IF, based on algorithmic parameters so that the task changes at every attempt. We found that IF was more effective than other kinds of activities to engage learners in actions aimed at improving their results, and the effects are stronger in low socio-economic contexts.
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- 2021
26. Basic Mathematical Modelling Competencies for Non-STEM Higher Education
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Marchisio, Marina, Roman, Fabio, and Sacchet, Matteo
- Abstract
The role of mathematical modelling pertains several disciplines, both STEM and non-STEM, and various fields: education, academy, work, everyday and social life. Despite its importance, it is not uncommon to see university students facing difficulties with the use of Mathematics to create models, even when mathematical entities that play a role in facing a problem belong to the study programs of secondary schools, and should thus be familiar also to students without a specific background in Mathematics. Difficulties can arise in various phases of modelling: in the comprehension of the problem, in the translation into mathematical formulas, in the resolution process or even in the interpretation of the results. In this paper, we give an analysis of an online test taken by 75 non-STEM students. The 10 questions of the test focused on specific items in mathematical modelling. During the test, students had to write down the reason why they chose a specific answer. The test allowed us to find and categorize the common errors students make and the phase in which it happens, suggesting actions in order to prevent them. Results show percentages of errors and discuss students' arguments. [For the full proceedings, see ED621892.]
- Published
- 2021
27. Lesson Learned from an Experience of Teaching Support in Higher Education for a Digital Transition in the New Scenario Created by COVID-19
- Author
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Bruschi, Barbara, Floris, Francesco, Marchisio, Marina, and Sacchet, Matteo
- Abstract
Teaching skills are fundamental for academic positions, which combine research and teaching activities. Thus, universities should look for candidates with excellent research records and teaching experience or skills; another strategy is the training of teaching staff. On the other hand, when dealing with already in-service teachers, the challenges for universities are completely different and it is often difficult to cope with digital technologies for education. Moreover, roles in the education process assume different perspectives. This is the background of this research, which investigates the measures adopted at the University of Turin to deal with the scenario of the COVID-19 pandemic and subsequent periods. 30 young graduates halfway between students and teachers, one per university department, support teachers and the digital transition. Their role ranges from the didactical support (online teaching methodologies and the use of the Learning Management System) to the preparation, delivery, and monitoring of online assessment and exams. These young assistants received a grant for their role and proper training over all these topics and other themes related to online education, such as accessibility, copyright, video editing. At the start of the second semester, a questionnaire was delivered to these grant holders to receive feedback on their activity during the first semester and exam period. We collected 26 answers from the questionnaire. Results show that, among the different roles, they were more involved with online examinations and students' support, while collaborating more with professors and with their peers. Most of these grant holders would like to participate again in such an experience, it being useful for their future career, the teachers of the future. [For the full proceedings, see ED621108.]
- Published
- 2021
28. Online University Orientation Models for Student Transition between Secondary and Tertiary Education
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Floris, Francesco, Marchisio, Marina, Sacchet, Matteo, Margaria, Tiziana, and Rabellino, Sergio
- Abstract
The transformation of higher education practices needs to be accompanied by the deployment of university guidance. This is especially important when activities have to be carried online and remotely. Online students expect to receive precise information to be successful learners, just as they would if they were in a face-to-face setting, but even more, due to the large capabilities of digital services. Worldwide universities provide free and open access to educational content online, but this is effective for guidance only if it is the main objective of courses and resources. One way to address student transition has been experimented by the University of Turin with the action Orient@mente that helps students in their transition from secondary school to university. In Orient@mente, students can find useful information, guidance activities, automatically graded tests to prepare for university admittance, online courses for revising basic knowledge, resources for foreign students, and information about the Erasmus program. This action has already proven its usefulness and it is expanding as a transversal and international model. Soon a new action will be fully developed, Eirenteering, a name mixing Eire (the Irish name for Ireland) and Orienteering. This paper discusses the methodologies adopted in Orient@mente and the forthcoming Eirenteering, together with results obtained with Orient@mente concerning the usage and the usefulness of the service. [For the full proceedings, see ED621108.]
- Published
- 2021
29. Fire Kasina advanced meditation produces experiences comparable to psychedelic and near-death experiences: A pilot study
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Woollacott, Marjorie, Riddle, Justin, Hermansson, Niffe, Sacchet, Matthew D., and Ingram, Daniel M.
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- 2024
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30. Neuromodulation and meditation: A review and synthesis toward promoting well-being and understanding consciousness and brain
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Abellaneda-Pérez, Kilian, Potash, Ruby M., Pascual-Leone, Alvaro, and Sacchet, Matthew D.
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- 2024
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31. Multimodal neurophenomenology of advanced concentration absorption meditation: An intensively sampled case study of Jhana
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Chowdhury, Avijit, Bianciardi, Marta, Chapdelaine, Eric, Riaz, Omar S., Timmermann, Christopher, van Lutterveld, Remko, Sparby, Terje, and Sacchet, Matthew D.
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- 2025
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32. Deconstructing the self and reshaping perceptions: An intensive whole-brain 7T MRI case study of the stages of insight during advanced investigative insight meditation
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Yang, Winson F.Z., Chowdhury, Avijit, Sparby, Terje, and Sacchet, Matthew D.
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- 2025
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33. Development of a digital intervention for psychedelic preparation (DIPP)
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Rosalind G. McAlpine, Matthew D. Sacchet, Otto Simonsson, Maisha Khan, Katarina Krajnovic, Larisa Morometescu, and Sunjeev K. Kamboj
- Subjects
Psychedelics ,Psychedelic preparedness ,Psychedelic therapy ,Psilocybin ,Meditation ,Digital intervention ,Medicine ,Science - Abstract
Abstract Psychedelic substances induce profound alterations in consciousness. Careful preparation is therefore essential to limit adverse reactions, enhance therapeutic benefits, and maintain user safety. This paper describes the development of a self-directed, digital intervention for psychedelic preparation. Drawing on elements from the UK Medical Research Council (MRC) framework for developing complex interventions, the design was informed by a four-factor model of psychedelic preparedness, using a person-centred approach. Our mixed-methods investigation consisted of two studies. The first involved interviews with 19 participants who had previously attended a ‘high-dose’ psilocybin retreat, systematically exploring their preparation behaviours and perspectives on the proposed intervention. The second study engaged 28 attendees of an ongoing psilocybin retreat in co-design workshops, refining the intervention protocol using insights from the initial interviews. The outcome is a co-produced 21-day digital course (Digital Intervention for Psychedelic Preparation (DIPP)), that is organised into four modules: Knowledge–Expectation, Psychophysical–Readiness, Safety–Planning, and Intention–Preparation. Fundamental components of the course include daily meditation practice, supplementary exercises tied to the weekly modules, and mood tracking. DIPP provides a comprehensive and scalable solution to enhance psychedelic preparedness, aligning with the broader shift towards digital mental health interventions.
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- 2024
- Full Text
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34. Multi-site benchmark classification of major depressive disorder using machine learning on cortical and subcortical measures
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Vladimir Belov, Tracy Erwin-Grabner, Moji Aghajani, Andre Aleman, Alyssa R. Amod, Zeynep Basgoze, Francesco Benedetti, Bianca Besteher, Robin Bülow, Christopher R. K. Ching, Colm G. Connolly, Kathryn Cullen, Christopher G. Davey, Danai Dima, Annemiek Dols, Jennifer W. Evans, Cynthia H. Y. Fu, Ali Saffet Gonul, Ian H. Gotlib, Hans J. Grabe, Nynke Groenewold, J Paul Hamilton, Ben J. Harrison, Tiffany C. Ho, Benson Mwangi, Natalia Jaworska, Neda Jahanshad, Bonnie Klimes-Dougan, Sheri-Michelle Koopowitz, Thomas Lancaster, Meng Li, David E. J. Linden, Frank P. MacMaster, David M. A. Mehler, Elisa Melloni, Bryon A. Mueller, Amar Ojha, Mardien L. Oudega, Brenda W. J. H. Penninx, Sara Poletti, Edith Pomarol-Clotet, Maria J. Portella, Elena Pozzi, Liesbeth Reneman, Matthew D. Sacchet, Philipp G. Sämann, Anouk Schrantee, Kang Sim, Jair C. Soares, Dan J. Stein, Sophia I. Thomopoulos, Aslihan Uyar-Demir, Nic J. A. van der Wee, Steven J. A. van der Werff, Henry Völzke, Sarah Whittle, Katharina Wittfeld, Margaret J. Wright, Mon-Ju Wu, Tony T. Yang, Carlos Zarate, Dick J. Veltman, Lianne Schmaal, Paul M. Thompson, Roberto Goya-Maldonado, and the ENIGMA Major Depressive Disorder working group
- Subjects
Medicine ,Science - Abstract
Abstract Machine learning (ML) techniques have gained popularity in the neuroimaging field due to their potential for classifying neuropsychiatric disorders. However, the diagnostic predictive power of the existing algorithms has been limited by small sample sizes, lack of representativeness, data leakage, and/or overfitting. Here, we overcome these limitations with the largest multi-site sample size to date (N = 5365) to provide a generalizable ML classification benchmark of major depressive disorder (MDD) using shallow linear and non-linear models. Leveraging brain measures from standardized ENIGMA analysis pipelines in FreeSurfer, we were able to classify MDD versus healthy controls (HC) with a balanced accuracy of around 62%. But after harmonizing the data, e.g., using ComBat, the balanced accuracy dropped to approximately 52%. Accuracy results close to random chance levels were also observed in stratified groups according to age of onset, antidepressant use, number of episodes and sex. Future studies incorporating higher dimensional brain imaging/phenotype features, and/or using more advanced machine and deep learning methods may yield more encouraging prospects.
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- 2024
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35. Learning Analytics to Evaluate the Effectiveness of Higher Education Student Failure Prevention
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International Association for Development of the Information Society (IADIS), Floris, Francesco, Marchisio, Marina, Sacchet, Matteo, and Rabellino, Sergio
- Abstract
Open Online Courses can serve different purposes: in the case of Orient@mente at the University of Torino, they aim at facilitating the transition from secondary to tertiary education with automatic evaluation tests that students can try in order to understand their capabilities in - and their attitude towards - certain disciplines, and with remedial courses to fill the gaps in their knowledge. The university strategy of Orient@mente first started in 2014 and, after six years of deployment of the online platform, it has collected many data from students that were interested in starting a university course. The natural comparison and correlation analysis juxtapose the academic results of students who practice self-assessment in Orient@mente with the other university students. The measurable that we considered in this comparison is the average number of ECTS acquired during the first year, since this is a number that is considered for the university evaluation system -- stakeholders in particular check the number of students who obtain more than 40 first-year ECTS. According to specific rules, we put together dataset from different origins, the platform logs, and users with the university record system. The results of this analysis, presented in this work, confirm the positive impact of Orient@mente on students, with statistical significance.
- Published
- 2020
36. Teacher Support in COVID-19 Pandemic to Develop Blended Learning Disruptive Models in Higher Education
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International Association for Development of the Information Society (IADIS), Floris, Francesco, Genovese, Alessio, Marchisio, Marina, Roman, Fabio, and Sacchet, Matteo
- Abstract
COVID-19 pandemic has created significant changes in higher education institutions. After university lockdown, a transition from face-to-face learning to distance learning was unavoidable and several teachers and students had to approach new technologies. The DELTA (Digital Education for Learning and Teaching Advances) Research Group provided support to six degree programs at the University of Turin: each professor received specific trainings and the group constantly helped and checked the implementation of the online courses. In this paper the support provided during the emergency period has been analysed in order to evaluate the improvements in teaching methodologies, and to assess professors' transition to future blended learning disruptive models. The results show an important change in methodology for some courses, aiming at improving the online learning processes. The research data analysis and qualitative study about the usage of the Digital Learning Environment describe the courses' disruptive models. They are useful to understand which elements of the emergency response turned out to be positive and which ones to be unfavourable, in order to be able to redesign post-COVID higher education.
- Published
- 2020
37. Digital Competences for Educators in the Italian Secondary School: A Comparison between DigCompEdu Reference Framework and the PP&S Project Experience
- Author
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Fissore, Cecilia, Floris, Francesco, Marchisio, Marina, Rabellino, Sergio, and Sacchet, Matteo
- Abstract
Schools are facing a new challenge in their approach to education, due to the spreading of digital technologies. New tools and new ideas take shape at an increasing rate. Educators and teachers at all levels need to be trained and keep up to date with technological opportunities. Some help comes from official EU documents providing directions, guidelines, and reference framework. This is the case of the DigCompEdu, a resource about digital competences for educators, which lists 22 digital competences divided into six main areas equally important for the development of good practices in digital education. In this paper, we want to observe the list of competences in the "Problem Posing and Solving" project, an Italian experience with teachers in STEM disciplines , supported by the Italian ministry of Education; this project makes use of digital technologies of different kinds and innovative methodologies that enhance teaching and learning in secondary schools. We will analyze the competency framework from the point of view of teachers and students participating to the project. [For the full proceedings, see ED621620.]
- Published
- 2020
38. Analysis Items to Assess the Quality of Open Online Courses for Higher Education
- Author
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Marchisio, Marina and Sacchet, Matteo
- Abstract
The quality of Massive Open Online Courses (MOOC) is an important topic to be addressed by different stakeholders: higher education institutions, MOOC providers, education companies, educational providers. National and international agencies are or will be deeply involved in preparing or attending common guidelines in order to fulfill quality of MOOCs. Some indicators that can help in analyzing quality are provided by the learner point of view, by pedagogy, by instructional design, by outcome measures. The latter has been the most widely adopted, since numerical data help in comparison between different platform or different educational experiences. But these data, such as completion and retention rates, were criticized when used to assess quality of MOOCs. In the literature, there are some checklists and framework that can help and guide the expert or novice designer in the process of MOOC developments. In the present work, we are going to address the experience of the start@unito project, an online platform developed at the University of Torino which offers 50 open online courses in order to facilitate the transition between secondary and tertiary education, making the students anticipate their career by attending a complete university module online prior to enrolment at the university. This could lead to an improvement in the number of ECTS credits acquired during the first year of university studies and to the drop-out rate. An analysis of the start@unito open online courses quality is provided according to the frameworks and checklists. [For the full proceedings, see ED621620.]
- Published
- 2020
39. Volitional mental absorption in meditation: Toward a scientific understanding of advanced concentrative absorption meditation and the case of jhana
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Winson F.Z. Yang, Terje Sparby, Malcolm Wright, Eunmi Kim, and Matthew D. Sacchet
- Subjects
Advanced meditation ,Advanced concentrative absorption meditation (ACAM) ,Jhana ,Neuroimaging ,MRI ,Consciousness ,Science (General) ,Q1-390 ,Social sciences (General) ,H1-99 - Abstract
Meditation has been integral to human culture for millennia, deeply rooted in various spiritual and contemplative traditions. While the field of contemplative science has made significant steps toward understanding the effects of meditation on health and well-being, there has been little study of advanced meditative states, including those achieved through intense concentration and absorption. We refer to these types of states as advanced concentrative absorption meditation (ACAM), characterized by absorption with the meditation object leading to states of heightened attention, clarity, energy, effortlessness, and bliss. This review focuses on a type of ACAM known as jhana (ACAM-J) due to its well-documented history, systematic practice approach, recurring phenomenological themes, and growing popularity among contemplative scientists and more generally in media and society. ACAM-J encompasses eight layers of deep concentration, awareness, and internal experiences. Here, we describe the phenomenology of ACAM-J and present evidence from phenomenological and neuroscientific studies that highlight their potential applications in contemplative practices, psychological sciences, and therapeutics. We additionally propose theoretical ACAM-J frameworks grounded in current cognitive neuroscientific understanding of meditation and ancient contemplative traditions. We aim to stimulate further research on ACAM more broadly, encompassing advanced meditation including meditative development and meditative endpoints. Studying advanced meditation including ACAM, and specific practices such as ACAM-J, can potentially revolutionize our understanding of consciousness and applications for mental health.
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- 2024
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40. Exploring the neural basis of non-invasive prehabilitation in brain tumour patients: An fMRI-based case report of language network plasticity
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Leonardo Boccuni, Alba Roca-Ventura, Edgar Buloz-Osorio, David Leno-Colorado, Jesús Martín-Fernández, María Cabello-Toscano, Ruben Perellón-Alfonso, Jose Carlos Pariente Zorrilla, Carlos Laredo, Cesar Garrido, Emma Muñoz-Moreno, Nuria Bargalló, Gloria Villalba, Francisco Martínez-Ricarte, Carlo Trompetto, Lucio Marinelli, Matthew D. Sacchet, David Bartrés-Faz, Kilian Abellaneda-Pérez, Alvaro Pascual-Leone, and Josep María Tormos Muñoz
- Subjects
brain tumour ,prehabilitation ,neurorehabilitation ,neuromodulation ,fMRI ,case report ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Primary brain neoplasms are associated with elevated mortality and morbidity rates. Brain tumour surgery aims to achieve maximal tumour resection while minimizing damage to healthy brain tissue. Research on Neuromodulation Induced Cortical Prehabilitation (NICP) has highlighted the potential, before neurosurgery, of establishing new brain connections and transfer functional activity from one area of the brain to another. Nonetheless, the neural mechanisms underlying these processes, particularly in the context of space-occupying lesions, remain unclear. A patient with a left frontotemporoinsular tumour underwent a prehabilitation protocol providing 20 sessions of inhibitory non-invasive neuromodulation (rTMS and multichannel tDCS) over a language network coupled with intensive task training. Prehabilitation resulted in an increment of the distance between the tumour and the language network. Furthermore, enhanced functional connectivity within the language circuit was observed. The present innovative case-study exposed that inhibition of the functional network area surrounding the space-occupying lesion promotes a plastic change in the network’s spatial organization, presumably through the establishment of novel functional pathways away from the lesion’s site. While these outcomes are promising, prudence dictates the need for larger studies to confirm and generalize these findings.
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- 2024
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41. Neural Abnormalities in Panic Disorder and Agoraphobia: A Meta-Analysis of Functional Activation Studies
- Author
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C. Baten, A. M. Klassen, G. Zamora, J. H. Shepherd, A. Badawia, A. Kailay, C. R. Leung, J. Sahota, S. Saravia, J. A. Miller, P. Hamilton, M. D. Sacchet, I. H. Gotlib, E. Woo, D. W. Hedges, and C. H. Miller
- Subjects
Psychiatry ,RC435-571 - Abstract
Introduction Panic disorder (PD) and agoraphobia (AG) are highly comorbid anxiety disorders with an increasing prevalence that have a significant clinical and public health impact but are not adequately recognized and treated. Although the current functional neuroimaging literature has documented a range of neural abnormalities in these disorders, primary studies are often not sufficiently powered and their findings have been inconsistent. Objectives This meta-analysis aims to advance our understanding of the neural underpinnings of PD and AG by identifying the most robust patterns of differential neural activation that differentiate individuals diagnosed with one of or both these disorders from age-matched healthy controls. Methods We conducted a comprehensive literature search in the PubMed database for all peer-reviewed, whole-brain, task-based functional magnetic resonance imaging (fMRI) activation studies that compared adults diagnosed with PD and/or AG with age-matched healthy controls. Each of these articles was screened by two independent coding teams using formal inclusion criteria and according to current PRISMA guidelines. We then performed a voxelwise, whole-brain, meta-analytic comparison of PD/AG participants with age-matched healthy controls using multilevel kernel density analysis (MKDA) with ensemble thresholding (p
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- 2024
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42. Abnormal Neural Activation in Attention-Deficit/Hyperactivity Disorder: A Meta-Analysis of Functional Magnetic Resonance Imaging Studies
- Author
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G. Zamora, C. Baten, A. M. Klassen, J. H. Shepherd, A. Catchpole, E. Davis, I. Dillsaver, C. E. Hunt, E. Johnson-Venegas, P. Hamilton, M. D. Sacchet, E. Woo, J. A. Miller, D. W. Hedges, and C. H. Miller
- Subjects
Psychiatry ,RC435-571 - Abstract
Introduction Attention-deficit/hyperactivity disorder (ADHD) is a highly prevalent psychiatric condition that frequently originates in early development and is associated with a variety of functional impairments. Despite a large functional neuroimaging literature on ADHD, our understanding of the neural basis of this disorder remains limited, and existing primary studies on the topic include somewhat divergent results. Objectives The present meta-analysis aims to advance our understanding of the neural basis of ADHD by identifying the most statistically robust patterns of abnormal neural activation throughout the whole-brain in individuals diagnosed with ADHD compared to age-matched healthy controls. Methods We conducted a meta-analysis of task-based functional magnetic resonance imaging (fMRI) activation studies of ADHD. This included, according to PRISMA guidelines, a comprehensive PubMed search and predetermined inclusion criteria as well as two independent coding teams who evaluated studies and included all task-based, whole-brain, fMRI activation studies that compared participants diagnosed with ADHD to age-matched healthy controls. We then performed multilevel kernel density analysis (MKDA) a well-established, whole-brain, voxelwise approach that quantitatively combines existing primary fMRI studies, with ensemble thresholding (p
- Published
- 2024
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43. A Meta-Analysis of fMRI Activation Studies of Ketamine in Healthy Participants
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J. H. Shepherd, A. Hickman, C. Baten, A. M. Klassen, G. Zamora, E. Johnson-Venegas, S. S. Madugula, E. Woo, J. A. Miller, M. D. Sacchet, D. W. Hedges, and C. H. Miller
- Subjects
Psychiatry ,RC435-571 - Abstract
Introduction There has been rapidly growing interest in understanding the pharmaceutical and clinical properties of psychedelic and dissociative drugs, with a particular focus on ketamine. This compound, long known for its anesthetic and dissociative properties, has garnered attention due to its potential to rapidly alleviate symptoms of depression, especially in individuals with treatment-resistant depression (TRD) or acute suicidal ideation or behavior. However, while ketamine’s psychopharmacological effects are increasingly well-documented, the specific patterns of its neural impact remain a subject of exploration and basic questions remain about its effects on functional activation in both clinical and healthy populations. Objectives This meta-analysis seeks to contribute to the evolving landscape of neuroscience research on dissociative drugs such as ketamine by comprehensively examining the effects of acute ketamine administration on neural activation, as measured by functional magnetic resonance imaging (fMRI), in healthy participants. Methods We conducted a meta-analysis of existing fMRI activation studies of ketamine using multilevel kernel density analysis (MKDA). Following a comprehensive PubMed search, we quantitatively synthesized all published primary fMRI whole-brain activation studies of the effects of ketamine in healthy subjects with no overlapping samples (N=18). This approach also incorporated ensemble thresholding (α=0.05-0.0001) to minimize cluster-size detection bias and Monte Carlo simulations to correct for multiple comparisons. Results Our meta-analysis revealed statistically significant (p
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- 2024
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44. Neural Abnormalities in Bipolar Disorder: A Meta-Analysis of Functional Neuroimaging Studies
- Author
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S. J. Herrera, F. A. Reyes, G. Johnson-Venegas, C. Baten, G. Zamora, A. M. Klassen, J. A. Miller, E. Woo, D. W. Hedges, P. J. Hamilton, I. H. Gotlib, M. D. Sacchet, and C. H. Miller
- Subjects
Psychiatry ,RC435-571 - Abstract
Introduction Bipolar I disorder (BD-I) is a chronic and recurrent mood disorder characterized by alternating episodes of depression and mania; it is also associated with substantial morbidity and mortality and with clinically significant functional impairments. While previous studies have used functional magnetic resonance imaging (fMRI) to examine neural abnormalities associated with BD-I, they have yielded mixed findings, perhaps due to differences in sampling and experimental design, including highly variable mood states at the time of scan. Objectives The purpose of this study is to advance our understanding of the neural basis of BD-I and mania, as measured by fMRI activation studies, and to inform the development of more effective brain-based diagnostic systems and clinical treatments. Methods We conducted a large-scale meta-analysis of whole-brain fMRI activation studies that compared participants with BD-I, assessed during a manic episode, to age-matched healthy controls. Following PRISMA guidelines, we conducted a comprehensive PubMed literature search using two independent coding teams to evaluate primary studies according to pre-established inclusion criteria. We then used multilevel kernel density analysis (MKDA), a well-established, voxel-wise, whole-brain, meta-analytic approach, to quantitatively synthesize all qualifying primary fMRI activation studies of mania. We used ensemble thresholding (p
- Published
- 2024
- Full Text
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45. An Umbrella Review of Effectiveness of Intravenous Ketamine in Treatment-Resistant Depression
- Author
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A. M. Klassen, C. Baten, J. H. Shepherd, G. Zamora, E. Johnson-Venegas, S. S. Madugula, E. Woo, J. A. Miller, M. D. Sacchet, D. W. Hedges, and C. H. Miller
- Subjects
Psychiatry ,RC435-571 - Abstract
Introduction Major depressive disorder (MDD) is a tremendous global disease burden and the leading cause of disability worldwide. Unfortunately, individuals diagnosed with MDD typically experience a delayed response to traditional antidepressants and many do not adequately respond to pharmacotherapy, even after multiple trials. The critical need for novel antidepressant treatments has led to a recent resurgence in the clinical application of psychedelics, and intravenous ketamine, which has been investigated as a rapid-acting treatment for treatment resistant depression (TRD) as well acute suicidal ideation and behavior. However, variations in the type and quality of experimental design as well as a range of treatment outcomes in clinical trials of ketamine make interpretation of this large body of literature challenging. Objectives This umbrella review aims to advance our understanding of the effectiveness of intravenous ketamine as a pharmacotherapy for TRD by providing a systematic, quantitative, large-scale synthesis of the empirical literature. Methods We performed a comprehensive PubMed search for peer-reviewed meta-analyses of primary studies of intravenous ketamine used in the treatment of TRD. Meta-analysis and primary studies were then screened by two independent coding teams according to pre-established inclusion criteria as well as PRISMA and METRICS guidelines. We then employed metaumbrella, a statistical package developed in R, to perform effect size calculations and conversions as well as statistical tests. Results In a large-scale analysis of 1,182 participants across 51 primary studies, repeated-dose administration of intravenous ketamine demonstrated statistically significant effects (p
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- 2024
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46. Functional connectivity signatures of major depressive disorder: machine learning analysis of two multicenter neuroimaging studies
- Author
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Gallo, Selene, El-Gazzar, Ahmed, Zhutovsky, Paul, Thomas, Rajat M., Javaheripour, Nooshin, Li, Meng, Bartova, Lucie, Bathula, Deepti, Dannlowski, Udo, Davey, Christopher, Frodl, Thomas, Gotlib, Ian, Grimm, Simone, Grotegerd, Dominik, Hahn, Tim, Hamilton, Paul J., Harrison, Ben J., Jansen, Andreas, Kircher, Tilo, Meyer, Bernhard, Nenadić, Igor, Olbrich, Sebastian, Paul, Elisabeth, Pezawas, Lukas, Sacchet, Matthew D., Sämann, Philipp, Wagner, Gerd, Walter, Henrik, Walter, Martin, and van Wingen, Guido
- Published
- 2023
- Full Text
- View/download PDF
47. Individualized Functional Brain System Topologies and Major Depression: Relationships Among Patch Sizes and Clinical Profiles and Behavior
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Sacchet, Matthew D., Keshava, Poorvi, Walsh, Shane W., Potash, Ruby M., Li, Meiling, Liu, Hesheng, and Pizzagalli, Diego A.
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- 2024
- Full Text
- View/download PDF
48. Volitional mental absorption in meditation: Toward a scientific understanding of advanced concentrative absorption meditation and the case of jhana
- Author
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Yang, Winson F.Z., Sparby, Terje, Wright, Malcolm, Kim, Eunmi, and Sacchet, Matthew D.
- Published
- 2024
- Full Text
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49. Beyond Mindfulness.
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SACCHET, MATTHEW D. and BREWER, JUDSON A.
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MINDFULNESS , *DEEP brain stimulation , *BRAIN stimulation , *GENERALIZED anxiety disorder - Abstract
The article discusses the emerging field of advanced meditation and its potential to transform mental health and our understanding of consciousness. The first wave of research on meditation focused on its clinical and therapeutic potential, while the second wave explored the mechanisms underlying mindfulness's effectiveness. The current third wave is investigating advanced meditation, which involves deeper and more intense states of practice that require extended training. Advanced meditation has been shown to lead to deep psychological transformation and can inspire individuals to reassess their careers and life goals. The article highlights the importance of scientific research in understanding and harnessing the benefits of advanced meditation for mental health interventions. [Extracted from the article]
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- 2024
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50. Teaching the Specialized Language of Mathematics with a Data-Driven Approach: What Data Do We Use?
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Cecilia Fissore, Francesco Floris, Marina Marchisio Conte, and Matteo Sacchet
- Published
- 2023
- Full Text
- View/download PDF
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