512 results on '"A. Ensenyat"'
Search Results
2. Machine Learning-Based Epigenetic Classifiers for Axillary Staging of Patients with ER-Positive Early-Stage Breast Cancer
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Orozco, Javier IJ, Le, Julie, Ensenyat-Mendez, Miquel, Baker, Jennifer L, Weidhaas, Joanne, Klomhaus, Alexandra, Marzese, Diego M, and DiNome, Maggie L
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer Genomics ,Genetics ,Machine Learning and Artificial Intelligence ,Clinical Research ,Women's Health ,Cancer ,Human Genome ,Precision Medicine ,Breast Cancer ,4.2 Evaluation of markers and technologies ,Axilla ,Breast Neoplasms ,Epigenesis ,Genetic ,Female ,Humans ,Lymph Node Excision ,Lymph Nodes ,Lymphatic Metastasis ,Machine Learning ,Neoplasm Staging ,Nomograms ,ROC Curve ,Sentinel Lymph Node Biopsy ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundIn the era of molecular stratification and effective multimodality therapies, surgical staging of the axilla is becoming less relevant for patients with estrogen receptor (ER)-positive early-stage breast cancer (EBC). Therefore, a nonsurgical method for accurately predicting lymph node disease is the next step in the de-escalation of axillary surgery. This study sought to identify epigenetic signatures in the primary tumor that accurately predict lymph node status.Patients and methodsWe selected a cohort of patients in The Cancer Genome Atlas (TCGA) with ER-positive, HER2-negative invasive ductal carcinomas, and clinically-negative axillae (n = 127). Clinicopathological nomograms from the Memorial Sloan Kettering Cancer Center (MSKCC) and the MD Anderson Cancer Center (MDACC) were calculated. DNA methylation (DNAm) patterns from primary tumor specimens were compared between patients with pN0 and those with > pN0. The cohort was divided into training (n = 85) and validation (n = 42) sets. Random forest was employed to obtain the combinations of DNAm features with the highest accuracy for stratifying patients with > pN0. The most efficient combinations were selected according to the area under the curve (AUC).ResultsClinicopathological models displayed a modest predictive potential for identifying > pN0 disease (MSKCC AUC 0.76, MDACC AUC 0.69, p = 0.15). Differentially methylated sites (DMS) between patients with pN0 and those with > pN0 were identified (n = 1656). DMS showed a similar performance to the MSKCC model (AUC = 0.76, p = 0.83). Machine learning approaches generated five epigenetic classifiers, which showed higher discriminative potential than the clinicopathological variables tested (AUC > 0.88, p < 0.05).ConclusionsEpigenetic classifiers based on primary tumor characteristics can efficiently stratify patients with no lymph node involvement from those with axillary lymph node disease, thereby providing an accurate method of staging the axilla.
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- 2022
3. 3-D chromatin conformation, accessibility, and gene expression profiling of triple-negative breast cancer
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Pere Llinàs-Arias, Miquel Ensenyat-Méndez, Javier I. J. Orozco, Sandra Íñiguez-Muñoz, Betsy Valdez, Chuan Wang, Anja Mezger, Eunkyoung Choi, Yan Zhou Tran, Liqun Yao, Franziska Bonath, Remi-André Olsen, Mattias Ormestad, Manel Esteller, Mathieu Lupien, and Diego M. Marzese
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Epigenetic profiling ,Chromatin accessibility ,Long-range interactions ,RNA levels ,ATAC-seq ,Hi-C ,Genetics ,QH426-470 - Abstract
Abstract Objectives Triple-negative breast cancer (TNBC) is a highly aggressive breast cancer subtype with limited treatment options. Unlike other breast cancer subtypes, the scarcity of specific therapies and greater frequencies of distant metastases contribute to its aggressiveness. We aimed to find epigenetic changes that aid in the understanding of the dissemination process of these cancers. Data description Using CRISPR/Cas9, our experimental approach led us to identify and disrupt an insulator element, IE8, whose activity seemed relevant for cell invasion. The experiments were performed in two well-established TNBC cellular models, the MDA-MB-231 and the MDA-MB-436. To gain insights into the underlying molecular mechanisms of TNBC invasion ability, we generated and characterized high-resolution chromatin interaction (Hi-C) and chromatin accessibility (ATAC-seq) maps in both cell models and complemented these datasets with gene expression profiling (RNA-seq) in MDA-MB-231, the cell line that showed more significant changes in chromatin accessibility. Altogether, our data provide a comprehensive resource for understanding the spatial organization of the genome in TNBC cells, which may contribute to accelerating the discovery of TNBC-specific alterations triggering advances for this devastating disease.
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- 2023
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4. Chromatin insulation orchestrates matrix metalloproteinase gene cluster expression reprogramming in aggressive breast cancer tumors
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Pere Llinàs-Arias, Miquel Ensenyat-Mendez, Sandra Íñiguez-Muñoz, Javier I. J. Orozco, Betsy Valdez, Matthew P. Salomon, Chikako Matsuba, Maria Solivellas-Pieras, Andrés F. Bedoya-López, Borja Sesé, Anja Mezger, Mattias Ormestad, Fernando Unzueta, Siri H. Strand, Alexander D. Boiko, E Shelley Hwang, Javier Cortés, Maggie L. DiNome, Manel Esteller, Mathieu Lupien, and Diego M. Marzese
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MMP1 ,MMP8 ,CTCF ,Insulator ,Chromatin ,Gene regulatory element ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Abstract Background Triple-negative breast cancer (TNBC) is an aggressive subtype that exhibits a high incidence of distant metastases and lacks targeted therapeutic options. Here we explored how the epigenome contributes to matrix metalloprotease (MMP) dysregulation impacting tumor invasion, which is the first step of the metastatic process. Methods We combined RNA expression and chromatin interaction data to identify insulator elements potentially associated with MMP gene expression and invasion. We employed CRISPR/Cas9 to disrupt the CCCTC-Binding Factor (CTCF) binding site on an insulator element downstream of the MMP8 gene (IE8) in two TNBC cellular models. We characterized these models by combining Hi-C, ATAC-seq, and RNA-seq with functional experiments to determine invasive ability. The potential of our findings to predict the progression of ductal carcinoma in situ (DCIS), was tested in data from clinical specimens. Results We explored the clinical relevance of an insulator element located within the Chr11q22.2 locus, downstream of the MMP8 gene (IE8). This regulatory element resulted in a topologically associating domain (TAD) boundary that isolated nine MMP genes into two anti-correlated expression clusters. This expression pattern was associated with worse relapse-free (HR = 1.57 [1.06 − 2.33]; p = 0.023) and overall (HR = 2.65 [1.31 − 5.37], p = 0.005) survival of TNBC patients. After CRISPR/Cas9-mediated disruption of IE8, cancer cells showed a switch in the MMP expression signature, specifically downregulating the pro-invasive MMP1 gene and upregulating the antitumorigenic MMP8 gene, resulting in reduced invasive ability and collagen degradation. We observed that the MMP expression pattern predicts DCIS that eventually progresses into invasive ductal carcinomas (AUC = 0.77, p
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- 2023
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5. El entrenamiento interválico aeróbico semisupervisado mejora la capacidad cardiorrespiratoria en adultos sedentarios con factores de riesgo cardiometabólico
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Assumpta Ensenyat, Leonardo Machado, Sergi Matas, and Alfonso Blanco
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consumo de oxígeno ,índice de eficiencia ventilatoria ,pendiente de la eficiencia del consumo de oxígeno ,prueba de ejercicio cardiopulmonar ,prueba de ejercicio graduado ,síndrome metabólico ,Special aspects of education ,LC8-6691 ,Sports ,GV557-1198.995 - Abstract
El objetivo de este estudio fue evaluar los efectos de un programa de ejercicio de alta intensidad semisupervisado junto con asesoramiento sobre hábitos adecuados para la adaptación cardiorrespiratoria al esfuerzo en adultos sedentarios con factores de riesgo cardiometabólico. Ensayo clínico controlado aleatorizado de tres grupos de cuarenta semanas de duración (intervención de 16 semanas y seguimiento a las 24 semanas). Se asignó a adultos sedentarios (23 hombres, 38 mujeres) con edades comprendidas entre los 34 y los 52 años (M = 44.6, DT = 4.6), y al menos un factor de riesgo cardiometabólico, a uno de los siguientes grupos: (1) entrenamiento interválico aeróbico (EIA) más asesoramiento sobre hábitos adecuados; (2) entrenamiento continuo de intensidad entre baja y moderada más asesoramiento sobre hábitos adecuados (ECT, de “entrenamiento continuo tradicional”); o (3) solo asesoramiento sobre hábitos adecuados (AHA). La capacidad cardiorrespiratoria, en cuanto a consumo de oxígeno pico (VO2pico) y consumo de oxígeno en el punto de compensación respiratoria (VO2PCR), el índice de eficiencia ventilatoria (pendiente de VE-VCO2) y la pendiente de eficiencia del consumo de oxígeno (PECO) se evaluaron al inicio, después de la intervención y en el seguimiento. Todos los programas de intervención generaron cambios significativos comparables en la capacidad cardiorrespiratoria, pero los cambios en VO2pico difirieron en función de si los participantes alcanzaron o no los criterios máximos al inicio del estudio. La intervención fue más eficaz para los participantes que no alcanzaron los criterios máximos al inicio del estudio que para los que sí los alcanzaron. En los participantes que no alcanzaron los criterios máximos al inicio del estudio, VO2pico aumentó significativamente. Todos los programas de intervención generaron aumentos comparables significativos pero no persistentes de VO2UV, ningún cambio en la pendiente de VE-VCO2 y mejorías persistentes de la PECO. La intervención semisupervisada de EIA tuvo efectos positivos sobre la adaptación fisiológica al esfuerzo y la capacidad cardiorrespiratoria, pero no difirió sustancialmente del ECT ni del AHA.
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- 2023
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6. Biological effects of intraoperative radiation therapy: histopathological changes and immunomodulation in breast cancer patients
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Javier I. J. Orozco, Betsy J. Valdez, Chikako Matsuba, Michael P. Simanonok, Miquel Ensenyat-Mendez, Judi Anne B. Ramiscal, Matthew P. Salomon, Yuki Takasumi, and Janie G. Grumley
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breast neoplasms ,intraoperative radiation therapy-IORT ,squamous metaplasia ,immune response ,tumor microenvironment ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionIntraoperative radiation therapy (IORT) delivers a single accelerated radiation dose to the breast tumor bed during breast-conserving surgery (BCS). The synergistic biologic effects of simultaneous surgery and radiation remain unclear. This study explores the cellular and molecular changes induced by IORT in the tumor microenvironment and its impact on the immune response modulation.MethodsPatients with hormone receptor (HR)-positive/HER2-negative, ductal carcinoma in situ (DCIS), or early-stage invasive breast carcinoma undergoing BCS with margin re-excision were included. Histopathological evaluation and RNA-sequencing in the re-excision tissue were compared between patients with IORT (n=11) vs. non-IORT (n=11).ResultsSquamous metaplasia with atypia was exclusively identified in IORT specimens (63.6%, p=0.004), mimicking DCIS. We then identified 1,662 differentially expressed genes (875 upregulated and 787 downregulated) between IORT and non-IORT samples. Gene ontology analyses showed that IORT was associated with the enrichment of several immune response pathways, such as inflammatory response, granulocyte activation, and T-cell activation (p
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- 2024
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7. Construction and validation of a gene expression classifier to predict immunotherapy response in primary triple-negative breast cancer
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Miquel Ensenyat-Mendez, Javier I. J. Orozco, Pere Llinàs-Arias, Sandra Íñiguez-Muñoz, Jennifer L. Baker, Matthew P. Salomon, Mercè Martí, Maggie L. DiNome, Javier Cortés, and Diego M. Marzese
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Medicine - Abstract
Abstract Background Immune checkpoint inhibitors (ICI) improve clinical outcomes in triple-negative breast cancer (TNBC) patients. However, a subset of patients does not respond to treatment. Biomarkers that show ICI predictive potential in other solid tumors, such as levels of PD-L1 and the tumor mutational burden, among others, show a modest predictive performance in patients with TNBC. Methods We built machine learning models based on pre-ICI treatment gene expression profiles to construct gene expression classifiers to identify primary TNBC ICI-responder patients. This study involved 188 ICI-naïve and 721 specimens treated with ICI plus chemotherapy, including TNBC tumors, HR+/HER2− breast tumors, and other solid non-breast tumors. Results The 37-gene TNBC ICI predictive (TNBC-ICI) classifier performs well in predicting pathological complete response (pCR) to ICI plus chemotherapy on an independent TNBC validation cohort (AUC = 0.86). The TNBC-ICI classifier shows better performance than other molecular signatures, including PD-1 (PDCD1) and PD-L1 (CD274) gene expression (AUC = 0.67). Integrating TNBC-ICI with molecular signatures does not improve the efficiency of the classifier (AUC = 0.75). TNBC-ICI displays a modest accuracy in predicting ICI response in two different cohorts of patients with HR + /HER2- breast cancer (AUC = 0.72 to pembrolizumab and AUC = 0.75 to durvalumab). Evaluation of six cohorts of patients with non-breast solid tumors treated with ICI plus chemotherapy shows overall poor performance (median AUC = 0.67). Conclusion TNBC-ICI predicts pCR to ICI plus chemotherapy in patients with primary TNBC. The study provides a guide to implementing the TNBC-ICI classifier in clinical studies. Further validations will consolidate a novel predictive panel to improve the treatment decision-making for patients with TNBC.
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- 2023
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8. Fuster, Joan: Nosaltres, els valencians, Barcelona: Edicions 62, 2022.
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Gabriel Ensenyat Pujol
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Language and Literature ,Philology. Linguistics ,P1-1091 - Published
- 2024
9. Regional Practice Variation and Outcomes in the Standard Versus Accelerated Initiation of Renal Replacement Therapy in Acute Kidney Injury (STARRT-AKI) Trial: A Post Hoc Secondary Analysis
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Vaara, Suvi T., Serpa Neto, Ary, Bellomo, Rinaldo, Adhikari, Neill K. J., Dreyfuss, Didier, Gallagher, Martin, Gaudry, Stephane, Hoste, Eric, Joannidis, Michael, Pettilä, Ville, Wang, Amanda Y., Kashani, Kianoush, Wald, Ron, Bagshaw, Sean M., Ostermann, Marlies, Bagshaw, Sean M, Wald, Ron, Adhikari, Neill K.J., Bellomo, Rinaldo, Dreyfuss, Didier, Du, Bin, Gallagher, Martin P., Gaudry, Stéphane, Hoste, Eric A., Lamontagne, François, Joannidis, Michael, Liu, Kathleen D., McAuley, Daniel F., McGuinness, Shay P., Nichol, Alistair D., Ostermann, Marlies, Palevsky, Paul M., Qiu, Haibo, Pettilä, Ville, Schneider, Antoine G., Smith, Orla M., Vaara, Suvi T., Weir, Matthew, Bellomo, Rinaldo, Eastwood, Glenn M., Peck, Leah, Young, Helen, Kruger, Peter, Laurie, Gordon, Saylor, Emma, Meyer, Jason, Venz, Ellen, Wetzig, Krista, French, Craig, McGain, Forbes, Mulder, John, Fennessy, Gerard, Koottayi, Sathyajith, Bates, Samantha, Towns, Miriam, Morgan, Rebecca, Tippett, Anna, Udy, Andrew, Mason, Chris, Licari, Elisa, Gantner, Dashiell, McClure, Jason, Nichol, Alistair, McCracken, Phoebe, Board, Jasmin, Martin, Emma, Vallance, Shirley, Young, Meredith, Vladic, Chelsey, McGloughlin, Steve, Gattas, David, Buhr, Heidi, Coles, Jennifer, Hutch, Debra, Wun, James, Cole, Louise, Whitehead, Christina, Lowrey, Julie, Masters, Kristy, Gresham, Rebecca, Campbell, Victoria, Gutierrez, David, Brailsford, Jane, Forbes, Loretta, Murray, Lauren, Maguire, Teena, NiChonghaile, Martina, Orford, Neil, Bone, Allison, Elderkin, Tania, Salerno, Tania, Chimunda, Tim, Fletcher, Jason, Broadfield, Emma, Porwal, Sanjay, Knott, Cameron, Boschert, Catherine, Smith, Julie, Richardson, Angus, Hill, Dianne, Duke, Graeme, Oziemski, Peter, Cegarra, Santiago, Chan, Peter, Welsh, Deborah, Hunter, Stephanie, Roodenburg, Owen, Dyett, John, Kokotsis, Nicos, Moser, Max, Yang, Yang, Padayachee, Laven, Vetro, Joseph, Gangopadhyay, Himangsu, Kaufman, Melissa, Ghosh, Angaj, Said, Simone, Patel, Alpesh, Bihari, Shailesh, Matheson, Elisha, Jin, Xia, Shrestha, Tapaswi, Schwartz, Kate, Gallagher, Martin P., Cross, Rosalba, Cheung, Winston, Wong, Helen, Kol, Mark, Shah, Asim, Wang, Amanda Y., Endre, Zoltan, Bradford, Celia, Janin, Pierre, Finfer, Simon, Diel, Naomi, Gatward, Jonathan, Hammond, Naomi, Delaney, Anthony, Bass, Frances, Yarad, Elizabeth, Buscher, Hergen, Reynolds, Claire, Baker, Nerilee, Joannidis, Michael, Bellmann, Romuald, Peer, Andreas, Hasslacher, Julia, Koglberger, Paul, Klein, Sebastian, Zotter, Klemens, Brandtner, Anna, Finkenstedt, Armin, Ditlbacher, Adelheid, Hartig, Frank, Fries, Dietmar, Bachler, Mirjam, Schenk, Bettina, Wagner, Martin, Staudinger, Thomas, Tiller, Esther, Schellongowski, Peter, Bojic, Andja, Hoste, Eric A., Bracke, Stephanie, De Crop, Luc, Vermeiren, Daisy, Thome, Fernando, Chiella, Bianca, Fendt, Lucia, Antunes, Veronica, Maisonneuve-Rosemont, Lafrance, Jean-Philippe, Lamontagne, François, D’Aragon, Frédérick, St-Arnaud, Charles, Mayette, Michael, Carbonnaeu, Élaine, Marchand, Joannie, Masse, Marie-Hélène, Ladouceur, Marilène, Turgeon, Alexis F., Lauzier, François, Bellemare, David, Langis Francoeur, Charles, LeBlanc, Guillaume, Guilbault, Gabrielle, Grenier, Stéphanie, Cloutier, Eve, Boivin, Annick, Delisle-Thibault, Charles, Giannakouros, Panagiota, Costerousse, Olivier, Cailhier, Jean-François, Carrier, François-Martin, Ghamraoui, Ali, Lebrasseur, Martine, Benettaib, Fatna, Salamé, Maya, Boumahni, Dounia, Tung Sia, Ying, Naud, Jean-François, Roy, Isabelle, Stelfox, Henry T., Ruddell, Stacey, Manns, Braden J., Duggan, Shelley, Carney, Dominic, Barchard, Jennifer, Whitlock, Richard P., Belley-Cote, Emilie, Savija, Nevena, Sabev, Alexandra, Campbell, Troy, Creary, Thais, Devereaux, Kelson, Brodutch, Shira, Rigatto, Claudio, Paunovic, Bojan, Mooney, Owen, Glybina, Anna, Harasemiw, Oksana, Di Nella, Michelle, Harmon, John, Mehta, Navdeep, Lakatos, Louis, Haslam, Nicole, Lellouche, Francois, Simon, Mathieu, Tung, Ying, Lizotte, Patricia, Bourchard, Pierre-Alexandre, Rochwerg, Bram, Karachi, Tim, Millen, Tina, Muscedere, John, Maslove, David, Gordon Boyd, J., Sibley, Stephanie, Drover, John, Hunt, Miranda, Georgescu, Ilinca, Wax, Randy, Lenga, Ilan, Sridhar, Kavita, Steele, Andrew, Fusco, Kelly, Ghate, Taneera, Tolibas, Michael, Robinson, Holly, Weir, Matthew A., Taneja, Ravi, Ball, Ian M., Garg, Amit, Campbell, Eileen, Ovsenek, Athena, Bagshaw, Sean M., van Diepen, Sean, Baig, Nadia, Magder, Sheldon, Yao, Han, Alam, Ahsan, Campisi, Josie, MacIntyre, Erika, Rokosh, Ella, Scherr, Kimberly, Lapinsky, Stephen, Mehta, Sangeeta, Shah, Sumesh, Niven, Daniel J., Stelfox, Henry T., Ruddell, Stacey, Russell, Michael, Jim, Kym, Brown, Gillian, Oxtoby, Kerry, Hall, Adam, Benoit, Luc, Sokolowski, Colleen, Prasad, Bhanu, Rao, Jag, Giebel, Shelley, Kutsogiannis, Demetrios J., Thompson, Patricia, Thompson, Tayne, Cirone, Robert, Kavikondala, Kanthi, Soth, Mark, Clarke, France, Takaoka, Alyson, Wald, Ron, Mazer, David, Burns, Karen, Friedrich, Jan, Klein, David, Sandhu, Gyan, Santos, Marlene, Khalid, Imrana, Hodder, Jennifer, Dodek, Peter, Ayas, Najib, Alcuaz, Victoria, Suen, Gabriel, Rewa, Oleksa, Singh, Gurmeet, Norris, Sean, Gibson, Neil, Arias, Castro, Shami, Aysha, Pelletier, Celine, Adhikari, Neill K.J., Zahirieh, Alireza, Amaral, Andre, Marinoff, Nicole, Kaur, Navjot, Perez, Adic, Wang, Jane, Haljan, Gregory, Condin, Christopher, McIntyre, Lauralyn, Gomes, Brigette, Porteous, Rebecca, Watpool, Irene, Hiremath, Swapnil, Clark, Edward, Herridge, Margaret S., Backhouse, Felicity, Elizabeth Wilcox, M., Walczak, Karolina, Ki, Vincent, Sharman, Asheer, Romano, Martin, Bagshaw, Sean M., Noel Gibney, R.T., Romanovsky, Adam S., Rewa, Oleksa, McCoshen, Lorena, Baig, Nadia, Wood, Gordon, Ovakim, Daniel, Auld, Fiona, Carney, Gayle, Duan, Meili, Ji, Xiaojun, Guo, Dongchen, Qi, Zhili, Lin, Jin, Zhang, Meng, Dong, Lei, Liu, Jingfeng, Liu, Pei, Zhi, Deyuan, Bai, Guoqiang, Qiu, Yu, Yang, Ziqi, Bai, Jing, Liu, Zhuang, Zhuang, Haizhou, Wang, Haiman, Li, Jian, Zhao, Mengya, Zhou, Xiao, Shi, Xianqing, Ye, Baning, Liu, Manli, Wu, Jing, Fu, Yongjian, Long, Dali, Pan, Yu, Wang, Jinlong, Mei, Huaxian, Zhang, Songsong, Wen, Mingxiang, Yang, Enyu, Mu, Sijie, Li, Jianquan, Hu, Tingting, Qin, Bingyu, Li, Min, Wang, Cunzhen, Dong, Xin, Wang, Kaiwu, Wang, Haibo, Yang, Jianxu, Du, Bin, Wang, Chuanyao, Wang, Dongxin, Li, Nan, Yu, Zhui, Xu, Song, Yao, Lan, Hou, Guo, Liu, Zhou, Lu, Liping, Lian, Yingtao, Wang, Chunting, Zhang, Jichen, Ding, Ruiqi, Qi, Guoqing, Wang, Qizhi, Wang, Peng, Meng, Zhaoli, Chen, Man, Hu, Xiaobo, He, Xiandi, Zhao, Shibing, Hang, Lele, Li, Rui, Qin, Suhui, Lu, Kun, Dun, Shijuan, Liu, Cheng, Zhou, Qi, Chen, Zhenzhen, Mei, Jing, Zhang, Minwei, Xu, Hao, Lin, Jincan, Shi, Qindong, Fu, Lijuan, Zeng, Qinjing, Ma, Hongye, Yan, Jinqi, Gao, Lan, Liu, Hongjuan, Zhang, Lei, Li, Hao, He, Xiaona, Fan, Jingqun, Guo, Litao, Liu, Yu, Wang, Xue, Sun, Jingjing, Liu, Zhongmin, Yang, Juan, Ding, Lili, Sheng, Lulu, Liu, Xingang, Yan, Jie, Wang, Quihui, Wang, Yifeng, Zhao, Dan, Zhao, Shuangping, Hu, Chenghuan, Li, Jing, Deng, Fuxing, Qiu, Haibo, Yang, Yi, Mo, Min, Pan, Chun, Wu, Changde, Huang, Yingzi, Huang, Lili, Liu, Airan, Pettilä, Ville, Vaara, Suvi T., Korhonen, Anna-Maija, Törnblom, Sanna, Sutinen, Sari, Pettilä, Leena, Heinonen, Jonna, Lappi, Eliria, Suhonen, Taria, Karlsson, Sari, Hoppu, Sanna, Jalkanen, Ville, Kuitunen, Anne, Levoranta, Markus, Långsjö, Jaakko, Ristimäki, Sanna, Malila, Kaisa, Wootten, Anna, Varila, Simo, Järvisalo, Mikko J, Inkinen, Outi, Kentala, Satu, Leivo, Keijo, Haltia, Paivi, Dreyfuss, Didier, Ricard, Jean-Damien, Messika, Jonathan, Tiagarajah, Abirami, Emery, Malo, Dechanet, Aline, Gernez, Coralie, Roux, Damien, Martin-Lefevre, Laurent, Fiancette, Maud, Vinatier, Isabelle, Claude Lacherade, Jean, Colin, Gwenhaël, Lebert, Christine, Azais, Marie-Ange, Yehia, Aihem, Pouplet, Caroline, Henry- Lagarrigue, Matthieu, Seguin, Amélie, Crosby, Laura, Maizel, Julien, Titeca-Beauport, Dimitri, Combes, Alain, Nieszkowska, Ania, Masi, Paul, Demoule, Alexandre, Mayaux, Julien, Dres, Martin, Morawiec, Elise, Decalvele, Maxens, Demiri, Suela, Faure, Morgane, Marios, Clémence, Mallet, Maxime, Amélie Ordon, Marie, Morizot, Laura, Cantien, Marie, Pousset, François, Gaudry, Stéphane, Poirson, Florent, Cohen, Yves, Argaud, Laurent, Cour, Martin, Bitker, Laurent, Simon, Marie, Hernu, Romain, Baudry, Thomas, De La Salle, Sylvie, Robine, Adrien, Sedillot, Nicholas, Tchenio, Xavier, Bouisse, Camille, Roux, Sylvie, Barbar, Davide, Trusson, Rémi, Tamion, Fabienne, Grangé, Steven, Carpentier, Dorothée, Chevrel, Guillaume, Ensenyat-Martin, Luis, Marque, Sophie, Quenot, Jean-Pierre, Andreu, Pascal, Dargent, Auguste, Large, Audrey, Chudeau, Nicolas, Landais, Mickael, Derrien, Benoit, Christophe Callahan, Jean, Guitton, Christophe, Le Moal, Charlène, Robert, Alain, Asehnoune, Karim, Cinotti, Raphaël, Grillot, Nicolas, Demeure, Dominique, Vinsonneau, Christophe, Rahmani, Imen, Marzouk, Mehdi, Dekeyser, Thibault, Sejourne, Caroline, Verlay, Mélanie, Thevenin, Fabienne, Delecolle, Lucie, Didier Thevenin, Lens, Souweine, Bertrand, Coupez, Elisabeth, Adda, Mireille, Eraldi, Jean-Pierre, Marchalot, Antoine, De Prost, Nicolas, Mekontso Dessap, Armand, Razazi, Keyvan, Meziani, Ferhat, Boisrame-Helms, Julie, Clere-Jehl, Raphael, Delabranche, Xavier, Kummerlen, Christine, Merdji, Hamid, Monnier, Alexandra, Rabouel, Yannick, Rahmani, Hassene, Allam, Hayat, Chenaf, Samir, Franja, Vincenta, Pons, Bertrand, Carles, Michel, Martino, Frédéric, Richard, Régine, Zuber, Benjamin, Lacave, Guillaume, Lakhal, Karim, Rozec, Bertrand, Dang Van, Hoa, Boulet, Éric, Dubos, René, Fadel, Fouad, Cleophax, Cedric, Dufour, Nicolas, Grant, Caroline, Thuong, Marie, Reignier, Jean, Canet, Emmanuel, Nicolet, Laurent, Boulain, Thierry, Nay, Mai-Anh, Benzekri, Dalila, Barbier, François, Bretagnol, Anne, Kamel, Toufik, Mathonnet, Armelle, Muller, Grégoire, Skarzynski, Marie, Rossi, Julie, Pradet, Amandine, Dos Santos, Sandra, Guery, Aurore, Muller, Lucie, Felix, Luis, Bohé, Julien, Thiéry, Guillaume, Aissaoui, Nadia, Vimpere, Damien, Commeureuc, Morgane, Diehl, Jean-Luc, Guerot, Emmanuel, Liangos, Orfeas, Wittig, Monika, Zarbock, Alexander, Küllmar, Mira, van Waegeningh, Thomas, Rosenow, Nadine, Nichol, Alistair D., Brickell, Kathy, Doran, Peter, Murray, Patrick T., Landoni, Giovanni, Lembo, Rosalba, Zangrillo, Alberto, Monti, Giacomo, Tozzi, Margherita, Marzaroli, Matteo, Lombardi, Gaetano, Paternoster, Gianluca, Vitiello, Michelangelo, McGuinness, Shay, Parke, Rachael, Butler, Magdalena, Gilder, Eileen, Cowdrey, Keri-Anne, Wallace, Samantha, Hallion, Jane, Woolett, Melissa, Neal, Philippa, Duffy, Karina, Long, Stephanie, McArthur, Colin, Simmonds, Catherine, Chen, Yan, McConnochie, Rachael, Newby, Lynette, Knight, David, Henderson, Seton, Mehrtens, Jan, Morgan, Stacey, Morris, Anna, Vander Hayden, Kymbalee, Burke, Tara, Bailey, Matthew, Freebairn, Ross, Chadwick, Lesley, Park, Penelope, Rolls, Christine, Thomas, Liz, Buehner, Ulrike, Williams, Erin, Albrett, Jonathan, Kirkham, Simon, Jackson, Carolyn, Browne, Troy, Goodson, Jennifer, Jackson, David, Houghton, James, Callender, Owen, Higson, Vicki, Keet, Owen, Dominy, Clive, Young, Paul, Hunt, Anna, Judd, Harriet, Lawrence, Cassie, Olatunji, Shaanti, Robertson, Yvonne, Latimer-Bell, Charlotte, Hendry, Deborah, Mckay-Vucago, Agnes, Beehre, Nina, Lesona, Eden, Navarra, Leanlove, Robinson, Chelsea, Jang, Ryan, Junge, Andrea, Lambert, Bridget, Schneider, Antoine G., Thibault, Michel, Eckert, Philippe, Kissling, Sébastien, Polychronopoulos, Erietta, Poli, Elettra, Altarelli, Marco, Schnorf, Madeleine, Abed Mallaird, Samia, Heidegger, Claudia, Perret, Aurelie, Montillier, Philippe, Sangla, Frederic, Neils, Seigenthaller, De Watteville, Aude, Phull, Mandeep-Kaur, George, Aparna, Hussain, Nauman, Pogreban, Tatiana, Lobaz, Steve, Daniels, Alison, Cunningham, Mishell, Kerr, Deborah, Nicholson, Alice, Shanmugasundaram, Pradeep, Abrams, Judith, Manso, Katarina, Hambrook, Geraldine, McKerrow, Elizabeth, Salva, Juvy, Foulkes, Stephen, Wise, Matthew, Morgan, Matt, Brooks, Jenny, Cole, Jade, Michelle Davies, Tracy, Hill, Helen, Thomas, Emma, Vizcaychipi, Marcela, Baharlo, Behrad, Carungcong, Jaime, Costa, Patricia, Martins, Laura, Kapoor, Ritoo, Hazelton, Tracy, Moon, Angela, Musselwhite, Janine, Shelley, Ben, McCall, Philip, Ostermann, Marlies, Arbane, Gill, Bociek, Aneta, Marotti, Martina, Lim, Rosario, Campos, Sara, Grau Novellas, Neus, Cennamo, Armando, Slack, Andrew, Wyncoll, Duncan, Camporota, Luigi, Sparkes, Simon, Tilley, Rosalinde, Rattray, Austin, Moreland, Gayle, Duffy, Jane, McGonigal, Elizabeth, Hopkins, Philip, Finney, Clare, Smith, John, Noble, Harriet, Watson, Hayley, Harris, Claire-Louise, Clarey, Emma, Corcoran, Eleanor, Beck, James, Howcroft, Clare, Youngs, Nora, Wilby, Elizabeth, Ogg, Bethan, Wolverson, Adam, Lee, Sandra, Butler, Susie, Okubanjo, Maryanne, Hindle, Julia, Welters, Ingeborg, Williams, Karen, Johnson, Emily, Patrick-Heselton, Julie, Shaw, David, Waugh, Victoria, Stewart, Richard, Mwaura, Esther, Wren, Lynn, Mew, Louise, Sutherland, Sara-Beth, Adderley, Jane, Ruddy, Jim, Harkins, Margaret, Kaye, Callum, Scott, Teresa, Mitchell, Wendy, Anderson, Felicity, Willox, Fiona, Jagannathan, Vijay, Clark, Michele, Purv, Sarah, Sharman, Andrew, Meredith, Megan, Ryan, Lucy, Conner, Louise, Peters, Cecilia, Harvey, Dan, Roshdy, Ashraf, Collins, Amy, Sim, Malcolm, Henderson, Steven, Chee, Nigel, Pitts, Sally, Bowman, Katie, Dilawershah, Maria, Vamplew, Luke, Howe, Elizabeth, Rogers, Paula, Hernandez, Clara, Prendergast, Clara, Benton, Jane, Rosenberg, Alex, Forni, Lui G., Grant, Alice, Carvelli, Paula, Raithatha, Ajay, Bird, Sarah, Richardson, Max, Needham, Matthew, Hirst, Claire, Ball, Jonathan, Leaver, Susannah, Howlett, Luisa, Castro Delgado, Carlos, Farnell-Ward, Sarah, Farrah, Helen, Gray, Geraldine, Joseph, Gipsy, Robinson, Francesca, Tridente, Ascanio, Harrop, Clare, Shuker, Karen, McLaughlan, Derek, Ramsey, Judith, Meehan, Sharon, Oliver Rose, Bernd, Reece-Anthony, Rosie, Gurung, Babita, Whitehouse, Tony, Snelson, Catherine, Veenith, Tonny, Johnston, Andy, Cooper, Lauren, Carrera, Ron, Ellis, Karen, Fellows, Emma, Harkett, Samanth, Bergin, Colin, Spruce, Elaine, Despy, Liesl, Goundry, Stephanie, Dooley, Natalie, Mason, Tracy, Clark, Amy, Dignam, Gemma, Ward, Geraldine, Attwood, Ben, Parsons, Penny, Mason, Sophie, Margarson, Michael, Lord, Jenny, McGlone, Philip, Hodgson, Luke E., Chadbourn, Indra, Gomez, Raquel, Margalef, Jordi, Pretorius, Rinus, Hamshere, Alexandra, Carter, Joseph, Cahill, Hazel, Grainger, Lia, Howard, Kate, Forshaw, Greg, Guy, Zoe, Kashani, Kianoush B., Albright, Robert C., Amsbaugh, Amy, Stoltenberg, Anita, Niven, Alexander S., Lynch, Matthew, O’Mara, AnnMarie, Naeem, Syed, Sharif, Sairah, McKenney Goulart, Joyce, Lynch, Matthew, O’Mara, AnnMarie, Naeem, Syed, Sharif, Sairah, McKenney Goulart, Joyce, Tolwani, Ashita, Lyas, Claretha, Latta, Laura, Bihorac, Azra, Hashemighouchani, Haleh, Efron, Philip, Ruppert, Matthew, Cupka, Julie, Kiley, Sean, Carson, Joshua, White, Peggy, Omalay, George, Brown, Sherry, Velez, Laura, Marceron, Alina, Neyra, Javier A., Carlos Aycinena, Juan, Elias, Madona, Ortiz-Soriano, Victor M., Hauschild, Caroline, and Dorfman, Robert
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- 2024
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10. Short-Term Panax Ginseng Extract Supplementation Reduces Fasting Blood Triacylglycerides and Oxygen Consumption during Sub-Maximal Aerobic Exercise in Male Recreational Athletes
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Didier Hernández-García, Ana Belén Granado-Serrano, Meritxell Martín-Gari, Assumpta Ensenyat, Alba Naudí, and Jose C. E. Serrano
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sub-maximal aerobic capacity ,endurance ,blood lipids ,Panax ginseng ,recreational athletes ,Microbiology ,QR1-502 - Abstract
Ginseng, a popular herbal supplement among athletes, is believed to enhance exercise capacity and performance. This study investigated the short-term effects of Panax ginseng extract (PG) on aerobic capacity, lipid profile, and cytokines. In a 14-day randomized, double-blind trial, male participants took 500 mg of PG daily. Two experiments were conducted: one in 10 km races (n = 31) and another in a laboratory-controlled aerobic capacity test (n = 20). Blood lipid and cytokine profile, ventilation, oxygen consumption, hemodynamic and fatigue parameters, and race time were evaluated. PG supplementation led to reduced total blood lipid levels, particularly in triacylglycerides (10 km races −7.5 mg/dL (95% CI −42 to 28); sub-maximal aerobic test −14.2 mg/dL (95% CI −52 to 23)), while post-exercise blood IL-10 levels were increased (10 km 34.0 pg/mL (95% CI −2.1 to 70.1); sub-maximal aerobic test 4.1 pg/mL (95% CI −2.8 to 11.0)), and oxygen consumption decreased during the sub-maximal aerobic test (VO2: −1.4 mL/min/kg (95% CI −5.8 to −0.6)). No significant differences were noted in race time, hemodynamic, or fatigue parameters. Overall, PG supplementation for 2 weeks showed benefits in blood lipid profile and energy consumption during exercise among recreational athletes. This suggests a potential role for PG in enhancing exercise performance and metabolic health in this population.
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- 2024
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11. Epigenetic Signatures Predict Pathologic Nodal Stage in Breast Cancer Patients with Estrogen Receptor-Positive, Clinically Node-Positive Disease
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Ensenyat-Mendez, Miquel, Rünger, Dennis, Orozco, Javier I. J., Le, Julie, Baker, Jennifer L., Weidhaas, Joanne, Marzese, Diego M., and DiNome, Maggie L.
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- 2022
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12. Establishing Novel Molecular Subtypes of Appendiceal Cancer
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Garland-Kledzik, Mary, Scholer, Anthony, Ensenyat-Mendez, Miquel, Orozco, Javier I. J., Khader, Adam, Santamaria-Barria, Juan, Fischer, Trevan, Pigazzi, Alessio, and Marzese, Diego M.
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- 2022
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13. Epigenetically regulated PCDHB15 impairs aggressiveness of metastatic melanoma cells
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Carrier, Arnaud, Desjobert, Cécile, Lobjois, Valérie, Rigal, Lise, Busato, Florence, Tost, Jörg, Ensenyat-Mendez, Miquel, Marzese, Diego M., Pradines, Anne, Favre, Gilles, Lamant, Laurence, Lanfrancone, Luisa, Etievant, Chantal, Arimondo, Paola B., and Riond, Joëlle
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- 2022
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14. Extracorporeal membrane oxygenation network organisation and clinical outcomes during the COVID-19 pandemic in Greater Paris, France: a multicentre cohort study
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JUVIN, Charles, SCHOELL, Thibault, D'Alessandro, Cosimo, MARIN, Sofica, NARDONE, Nathalie, DEMONDION, Pierre, MEYER, Horacio, BOUNADER, Karl, MOIROUX, Alexander, AKAMKAM, Ali, FADEL, Guillaume, RANDRIANALISOA, Erwan, CUSQUEL, Sébastien, LE GLOAHEC, Patrice, HIRSCHAUER, Elisabeth, MUSQUET, Fabrice, Jego, Pierre-Marie, Guedes, Hélène, Roy, Théophile, Mercereau, Lina, Corvol, Emmanuel, Laboure, Anne, Vilanove, Flore, Peperoni, Marco, Machado, Dariène, Sely, Aly, Fortanier, Marion, Gantois, Séverine, Tran, Emilie, Bosq, Elisabeth, Fontanier, Aurélie, Morin, Alice, Cousin, Jocelyne, Bovagnet, Stéphanie, Luyt, Charles Edouard, Hekimian, Guillaume, Brechot, Nicolas, Pineton de Chambrun, Marc, Desnos, Cyrielle, Chomeloux, Juliette, Arzoine, Jeremy, Guerin, Emmanuelle, Monsel, Antoine, Voiriot, Guillaume, Levy, David, Baron, Elodie, Beurton, Alexandra, Chommeloux, Juliette, Paris, Meng, Nemlaghi, Safaa, Bay, Pierre, Demoule, Alexandre, Guidet, Bertrand, Constantin, Jean Michel, Fartoukh, Muriel, Dres, Martin, Nataf, Patrick, Franchineau, Guillaume, Le Fevre, Lucie, Raffoul, Richard, Alkhoder, Soleiman, Ghodbane, Walid, Pisani, Angelo, Braham, Wael, Bessem Gara, Ali, MORDANT, Pierre, CASTIER, Yves-Hervé, de MONTMOLLIN, Etienne, BOUADMA, Lila, TIMSIT, Jean-François, Langeron, Olivier, de Roux, Quentin, Alessandri, Claire, Arminot-Frémaux, Margot, Clariot, Simon, Dessalle, Thomas, Kudela, Agathe, Ly, André, Meffert, Arnaud, Skripkina, Elena, Fiore, Antonio, Radu, Costin, Dupuy-Montbrun, Eleonora, Latremouille, Christian, Mercier, Olaf, Deleuze, Philippe, STEPHAN, François, Duranteau, Jacques, Richard, Christian, Werner, Marie, Teboul, Jean-Louis, Monnet, Xavier, Debbagh, Hassan, Chapelier, Alain, De Wolf, Julien, Glorion, Matthieu, Pricopi, Ciprian, Cassiano, Francesco, Jacquemin, Sébastien, Tachon, Guillaume, Parquin, François, Zuber, Benjamin, Carriou, Alain, Mira, Jean-Paul, Charpentier, Julien, Pene, Frederic, Nguyen, Lee, Voicu, Sébastian, Deye, Nicolas, Malissin, Isabelle, Sutterlin, Laetitia, Naim, Giulia, Pépin-Lehalleur, Adrien, Mrad, Aymen, Ekhérian, Jean-Michel, Nguyen, Philippe, Sidéris, Georgios, Vodovar, Dominique, Grant, Caroline, Arcelli, Mattéo, Copie, Alban, Errabih, Zaccaria, Gonde, Antoine, Magalhaes, Adèle, Meurisse, Edouard, Nitenberg, Kiyoko, Perault, Arthur, Perrin, Lucile, Renaux, Maxime, Marqué, Sophie, Ensenyat-Martin, Luis, Delpierre, Eric, Duprey, Matthieu, da Silva, Daniel, Verdière, Bruno, Amour, Julien, Clément, Marina, Ollivier, Yves, Morichau-Beauchant, Tristan, Daviaud, Fabrice, Le Breton, Camille, Freita-Ramos, Santiago, Amouretti, Marc, Billiet, Pierre Antoine, Dao, Myriam, Dumont, Louis Marie, Federici, Laura, Gaborieau, Baptiste, Postel-Vinay, Pierre, Vuillard, Constance, Zucman, Noémie, Dreyfuss, Didier, Ricard, Jean Damien, Roux, Damien, Lebreton, Guillaume, Schmidt, Matthieu, Ponnaiah, Maharajah, Folliguet, Thierry, Para, Marylou, Guihaire, Julien, Lansac, Emmanuel, Sage, Edouard, Cholley, Bernard, Mégarbane, Bruno, Cronier, Pierrick, Zarka, Jonathan, Da Silva, Daniel, Besset, Sebastien, Lacombat, Igor, Mongardon, Nicolas, Cerf, Charles, Saiydoun, Gabriel, Sonneville, Romain, Chiche, Jean-Daniel, Longrois, Dan, Combes, Alain, and Leprince, Pascal
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- 2021
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15. Is the 21-Gene Recurrence Score on Core Needle Biopsy Equivalent to Surgical Specimen in Early-Stage Breast Cancer? A Comparison of Gene Expression Between Paired Core Needle Biopsy and Surgical Specimens
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Orozco, Javier I. J., Chang, Shu-Ching, Matsuba, Chikako, Ensenyat-Mendez, Miquel, Grunkemeier, Gary L., Marzese, Diego M., and Grumley, Janie G.
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- 2021
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16. Aln2tbl: building a mitochondrial features table from a assembly alignment in fasta format
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Joan Pons, Juan José Ensenyat, Pere Bover, Miquel Serra, and Francesco Nardi
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mitochondrial genome ,gene annotation ,feature table ,python ,genbank submission ,Genetics ,QH426-470 - Abstract
The sequencing, annotation and analysis of complete mitochondrial genomes is an important research tool in phylogeny and evolution. Starting with the primary sequence, genes/features are generally annotated automatically to obtain preliminary annotations in the form of a feature table. Further manual curation in a graphic alignment editor is nevertheless necessary to revise annotations. As such, the automatically generated feature table is invalidated and has to be modified manually before submission to data banks. We developed aln2tbl.py, a python script that recreates a feature table from a manually refined alignment of genes mapped on the mitochondrial genome in fasta format. The feature table is populated with notes and annotations specific to mitochondrial genomes. The table can be used to create a sqn file to be submitted directly to data banks. In summary, our scripts fills one gap in the available toolbox and, combined with other software, allows the automation of the entire process, from primary sequence to annotated genome submission, even if a manual curation step is conducted in a visual sequence editor.
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- 2021
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17. iGlioSub: an integrative transcriptomic and epigenomic classifier for glioblastoma molecular subtypes
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Miquel Ensenyat-Mendez, Sandra Íñiguez-Muñoz, Borja Sesé, and Diego M. Marzese
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Glioblastoma ,Machine learning ,Molecular subtypes ,Epigenetics ,iGlioSub ,Cancer ,Computer applications to medicine. Medical informatics ,R858-859.7 ,Analysis ,QA299.6-433 - Abstract
Abstract Background Glioblastoma (GBM) is the most aggressive and prevalent primary brain tumor, with a median survival of 15 months. Advancements in multi-omics profiling combined with computational algorithms have unraveled the existence of three GBM molecular subtypes (Classical, Mesenchymal, and Proneural) with clinical relevance. However, due to the costs of high-throughput profiling techniques, GBM molecular subtyping is not currently employed in clinical settings. Methods Using Random Forest and Nearest Shrunken Centroid algorithms, we constructed transcriptomic, epigenomic, and integrative GBM subtype-specific classifiers. We included gene expression and DNA methylation (DNAm) profiles from 304 GBM patients profiled in the Cancer Genome Atlas (TCGA), the Human Glioblastoma Cell Culture resource (HGCC), and other publicly available databases. Results The integrative Glioblastoma Subtype (iGlioSub) classifier shows better performance (mean AUC = 95.9%) stratifying patients than gene expression (mean AUC = 91.9%) and DNAm-based classifiers (AUC = 93.6%). Also, to expand the understanding of the molecular differences between the GBM subtypes, this study shows that each subtype presents unique DNAm patterns and gene pathway activation. Conclusions The iGlioSub classifier provides the basis to design cost-effective strategies to stratify GBM patients in routine pathology laboratories for clinical trials, which will significantly accelerate the discovery of more efficient GBM subtype-specific treatment approaches.
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- 2021
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18. Comparative cognition in three understudied ungulate species: European bison, forest buffalos and giraffes
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Alvaro Lopez Caicoya, Federica Amici, Conrad Ensenyat, and Montserrat Colell
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Ungulate ,Object permanence ,Acoustic cues ,Cognition ,Bovids ,Bison ,Zoology ,QL1-991 - Abstract
Abstract Background Comparative cognition has historically focused on a few taxa such as primates, birds or rodents. However, a broader perspective is essential to understand how different selective pressures affect cognition in different taxa, as more recently shown in several studies. Here we present the same battery of cognitive tasks to two understudied ungulate species with different socio-ecological characteristics, European bison (Bison bonasus) and forest buffalos (Syncerus caffer nanus), and we compare their performance to previous findings in giraffes (Giraffa camelopardalis). We presented subjects with an Object permanence task, Memory tasks with 30 and 60 s delays, two inference tasks based on acoustic cues (i.e. Acoustic inference tasks) and a control task to check for the use of olfactory cues (i.e. Olfactory task). Results Overall, giraffes outperformed bison and buffalos, and bison outperformed buffalos (that performed at chance level). All species performed better in the Object permanence task than in the Memory tasks and one of the Acoustic inference tasks (which they likely solved by relying on stimulus enhancement). Giraffes performed better than buffalos in the Shake full Acoustic inference task, but worse than bison and buffalos in the Shake empty Acoustic inference task. Conclusions In sum, our results are in line with the hypothesis that specific socio-ecological characteristics played a crucial role in the evolution of cognition, and that higher fission-fusion levels and larger dietary breadth are linked to higher cognitive skills. This study shows that ungulates may be an excellent model to test evolutionary hypotheses on the emergence of cognition.
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- 2021
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19. Short-Term Panax Ginseng Extract Supplementation Reduces Fasting Blood Triacylglycerides and Oxygen Consumption during Sub-Maximal Aerobic Exercise in Male Recreational Athletes
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Hernández-García, Didier, primary, Granado-Serrano, Ana Belén, additional, Martín-Gari, Meritxell, additional, Ensenyat, Assumpta, additional, Naudí, Alba, additional, and Serrano, Jose C. E., additional
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- 2024
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20. Giraffes go for more: a quantity discrimination study in giraffes (Giraffa camelopardalis)
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Caicoya, Alvaro L., Colell, Montserrat, Holland, Ruben, Ensenyat, Conrad, and Amici, Federica
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- 2021
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21. ASO Visual Abstract: Machine Learning-Based Epigenetic Classifiers for Axillary Staging of Patients with ER-Positive Early-Stage Breast Cancer
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Orozco, Javier I. J., Le, Julie, Ensenyat-Mendez, Miquel, Baker, Jennifer L., Weidhaas, Joanne, Klomhaus, Alexandra, Marzese, Diego M., and DiNome, Maggie L.
- Published
- 2022
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22. Fuster, Joan: Nosaltres, els valencians, Barcelona: Edicions 62, 2022.
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Ensenyat Pujol, Gabriel and Ensenyat Pujol, Gabriel
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- 2024
23. Molecular Characteristic of High Grade Glioma in Relation to 5-ala Fluorescence Intensity
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Arjona, Santiago Garfias, primary, Almunia, Mónica Lara, additional, Valentí, Ester Antón, additional, Lopetegui, Javier Pierola, additional, Escalas, Juan Bestard, additional, Barcelo, Albert Maimo, additional, Marzese-Parrilli, Diego Matías, additional, Íñiguez-Muñoz, Sandra, additional, Ensenyat-Mendez, Miquel, additional, and Doval, Marta Brell, additional
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- 2024
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24. Correction to: Chromatin insulation dynamics in glioblastoma: challenges and future perspectives of precision oncology
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Sesé, Borja, Ensenyat-Mendez, Miquel, Iñiguez, Sandra, Llinàs-Arias, Pere, and Marzese, Diego M.
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- 2021
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25. Chromatin insulation dynamics in glioblastoma: challenges and future perspectives of precision oncology
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Sesé, Borja, Ensenyat-Mendez, Miquel, Iñiguez, Sandra, Llinàs-Arias, Pere, and Marzese, Diego M.
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- 2021
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26. Correction to: iGlioSub: an integrative transcriptomic and epigenomic classifier for glioblastoma molecular subtypes
- Author
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Ensenyat-Mendez, Miquel, Íñiguez-Muñoz, Sandra, Sesé, Borja, and Marzese, Diego M.
- Published
- 2021
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27. The Meaning of Hispania in Mediaeval Majorca
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Pujol, Gabriel Ensenyat, primary
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- 2021
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28. Current Triple-Negative Breast Cancer Subtypes: Dissecting the Most Aggressive Form of Breast Cancer
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Miquel Ensenyat-Mendez, Pere Llinàs-Arias, Javier I. J. Orozco, Sandra Íñiguez-Muñoz, Matthew P. Salomon, Borja Sesé, Maggie L. DiNome, and Diego M. Marzese
- Subjects
triple-negative breast cancer ,TNBC ,molecular subtype of breast cancer ,epigenetics ,clustering ,artificial intelligence-AI ,Neoplasms. Tumors. Oncology. Including cancer and carcinogens ,RC254-282 - Abstract
Triple-negative breast cancer (TNBC) is a highly heterogeneous disease defined by the absence of estrogen receptor (ER) and progesterone receptor (PR) expression, and human epidermal growth factor receptor 2 (HER2) overexpression that lacks targeted treatments, leading to dismal clinical outcomes. Thus, better stratification systems that reflect intrinsic and clinically useful differences between TNBC tumors will sharpen the treatment approaches and improve clinical outcomes. The lack of a rational classification system for TNBC also impacts current and emerging therapeutic alternatives. In the past years, several new methodologies to stratify TNBC have arisen thanks to the implementation of microarray technology, high-throughput sequencing, and bioinformatic methods, exponentially increasing the amount of genomic, epigenomic, transcriptomic, and proteomic information available. Thus, new TNBC subtypes are being characterized with the promise to advance the treatment of this challenging disease. However, the diverse nature of the molecular data, the poor integration between the various methods, and the lack of cost-effective methods for systematic classification have hampered the widespread implementation of these promising developments. However, the advent of artificial intelligence applied to translational oncology promises to bring light into definitive TNBC subtypes. This review provides a comprehensive summary of the available classification strategies. It includes evaluating the overlap between the molecular, immunohistochemical, and clinical characteristics between these approaches and a perspective about the increasing applications of artificial intelligence to identify definitive and clinically relevant TNBC subtypes.
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- 2021
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29. Problem solving in European bison (Bison bonasus): two experimental approaches
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Alvaro L. Caicoya, Montserrat Colell, Conrad Ensenyat, and Federica Amici
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European bison ,insight ,Köhler ,problem solving ,ungulates ,Bison bonasus ,Science - Abstract
The ability to solve novel problems is crucial for individual fitness. However, studies on problem solving are usually done on few taxa, with species with low encephalization quotient being rarely tested. Here, we aimed to study problem solving in a non-domesticated ungulate species, European bison, with two experimental tasks. In the first task, five individuals were presented with a hanging barrel filled with food, which could either be directly accessed (control condition) or which could only be reached by pushing a tree stump in the enclosure below it and stepping on it (experimental condition). In the second task, five individuals were repeatedly fed by an experimenter using a novel bucket to retrieve food from a bag. Then, three identical buckets were placed in the enclosure, while the experimenter waited outside with the bag without feeding the bison, either with a bucket (control condition) or without it (experimental condition). In the first task, no bison moved the stump behind the barrel and/or stepped on it to reach the food. In the second task, two individuals solved the task by pushing the bucket within the experimenter's reach, twice in the experimental and twice in the control condition. We suggest that bison showed a limited ability to solve novel problems, and discuss the implications for their understanding of the functional aspects of the tasks.
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- 2021
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30. ASO Visual Abstract: Epigenetic Signatures Predict Pathologic Nodal Stage in Breast Cancer Patients with Estrogen-Receptor-Positive, Clinically Node-Positive Disease
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Ensenyat-Mendez, Miquel, Rünger, Dennis, Orozco, Javier I. J., Le, Julie, Baker, Jennifer L., Weidhaas, Joanne, Marzese, Diego M., and DiNome, Maggie L.
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- 2022
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31. Clinicopathological Features of Triple-Negative Breast Cancer Epigenetic Subtypes
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DiNome, Maggie L., Orozco, Javier I. J., Matsuba, Chikako, Manughian-Peter, Ayla O., Ensenyat-Mendez, Miquel, Chang, Shu-Ching, Jalas, John R., Salomon, Matthew P., and Marzese, Diego M.
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- 2019
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32. Gaze Following in Ungulates: Domesticated and Non-domesticated Species Follow the Gaze of Both Humans and Conspecifics in an Experimental Context
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Alina Schaffer, Alvaro L. Caicoya, Montserrat Colell, Ruben Holland, Conrad Ensenyat, and Federica Amici
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domestication ,gaze following ,social cognition ,ungulates ,human relation to animals ,Psychology ,BF1-990 - Abstract
Gaze following is the ability to use others’ gaze to obtain information about the environment (e.g., food location, predators, and social interactions). As such, it may be highly adaptive in a variety of socio-ecological contexts, and thus be widespread across animal taxa. To date, gaze following has been mostly studied in primates, and partially in birds, but little is known on the gaze following abilities of other taxa and, especially, on the evolutionary pressures that led to their emergence. In this study, we used an experimental approach to test gaze following skills in a still understudied taxon, ungulates. Across four species (i.e., domestic goats and lamas, and non-domestic guanacos and mouflons), we assessed the individual ability to spontaneously follow the gaze of both conspecifics and human experimenters in different conditions. In line with our predictions, species followed the model’s gaze both with human and conspecific models, but more likely with the latter. Except for guanacos, all species showed gaze following significantly more in the experimental conditions (than in the control ones). Despite the relative low number of study subjects, our study provides the first experimental evidence of gaze following skills in non-domesticated ungulates, and contributes to understanding how gaze following skills are distributed in another taxon—an essential endeavor to identify the evolutionary pressures leading to the emergence of gaze following skills across taxa.
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- 2020
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33. Enhancing Multimodal Learning Through Traditional Sporting Games: Marro360°
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Pere Lavega-Burgués, Rafael A. Luchoro-Parrilla, Jorge Serna, Cristòfol Salas-Santandreu, Pablo Aires-Araujo, Rosa Rodríguez-Arregi, Verónica Muñoz-Arroyave, Assumpta Ensenyat, Sabrine Damian-Silva, Leonardo Machado, Queralt Prat, Unai Sáez de Ocáriz, Aaron Rillo-Albert, David Martín-Martínez, and Miguel Pic
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observational methodology ,physical education ,T-pattern analysis ,motor conduct ,motor praxiology ,decision-making ,Psychology ,BF1-990 - Abstract
Different international organizations and initiatives highlight the contribution of the traditional sporting games (TSGs) to favor the diversity of knowledge, values, and attitudes necessary for today’s society. TSG such as Marro trigger multimodal learning contexts (driving conducts, interpersonal and organic relationships), with great interest in the educational and sports initiation field. The purpose of two studies presented in this manuscript was to examine the 360° multimodal strategic intervention (decisional, relational, and organic) of two teams faced in a Marro game. For this study, a quasi-experimental design was used composed by a single test applied to two non-equivalent teams. Mixed methods were used with an observational methodology in Quadrant III: nomothetic, punctual, and multidimensional. Fourteen university students participated [mean (M) = 20.49, standard deviation (SD) = 2.18]. Three internal logic variables were studied: outcome, role, and subrole; and three variables referred to the dimensions of motor conduct: relationship, risk in the decision, and physical effort. A mixed ad hoc registration system was designed with acceptable margins of data quality. For Study 1, cross-tabulations and classification trees were applied, while for Study 2 strategic T-patterns were identified. The relevance of the scoreboard (p < 0.001; Effect Size = 0.386) and the realization of the role (p < 0.001; ES = 0.091) for the study of multimodal strategic chains in the Marro game were confirmed. The detection of regularities in specific interaction (Hunters against Hares) by Theme (p < 0.005) allowed for interpretation of the process of strategic conducts of both teams during the game. Knowing the strategic chains of playful coexistence among equals through a multimodal range of variables and approaches has revealed an unusual dynamic picture. The study provides scientific evidence for the physical education teacher on the dynamics of the game of Marro. The pedagogical application of these contributions must be made according to curricular interests.
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- 2020
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34. ASO Visual Abstract: Is the 21-Gene Recurrence Score on Core Needle Biopsy Equivalent to Surgical Specimen in Early-Stage Breast Cancer?: A Comparison of Gene Expression Between Paired Core Needle Biopsy and Surgical Specimens
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Orozco, Javier I. J., Chang, Shu-Ching, Matsuba, Chikako, Ensenyat-Mendez, Miquel, L. Grunkemeier, Gary, Marzese, Diego M., and Grumley, Janie G.
- Published
- 2021
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35. Chromatin insulation orchestrates matrix metalloproteinase gene cluster expression reprogramming in aggressive breast cancer tumors
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Llinàs-Arias, Pere, primary, Ensenyat-Mendez, Miquel, additional, Íñiguez-Muñoz, Sandra, additional, Orozco, Javier I. J., additional, Valdez, Betsy, additional, Salomon, Matthew P., additional, Matsuba, Chikako, additional, Solivellas-Pieras, Maria, additional, Bedoya-López, Andrés F., additional, Sesé, Borja, additional, Mezger, Anja, additional, Ormestad, Mattias, additional, Unzueta, Fernando, additional, Strand, Siri H., additional, Boiko, Alexander D., additional, Hwang, E Shelley, additional, Cortés, Javier, additional, DiNome, Maggie L., additional, Esteller, Manel, additional, Lupien, Mathieu, additional, and Marzese, Diego M., additional
- Published
- 2023
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36. 3-D chromatin conformation, accessibility, and gene expression profiling of triple-negative breast cancer
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Llinàs-Arias, Pere, primary, Ensenyat-Méndez, Miquel, additional, Orozco, Javier I. J., additional, Íñiguez-Muñoz, Sandra, additional, Valdez, Betsy, additional, Wang, Chuan, additional, Mezger, Anja, additional, Choi, Eunkyoung, additional, Tran, Yan Zhou, additional, Yao, Liqun, additional, Bonath, Franziska, additional, Olsen, Remi-André, additional, Ormestad, Mattias, additional, Esteller, Manel, additional, Lupien, Mathieu, additional, and Marzese, Diego M., additional
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- 2023
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37. Epigenetic Profiles of Triple-Negative Breast Cancers of African American and White Females
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Ensenyat-Mendez, Miquel, primary, Solivellas-Pieras, Maria, additional, Llinàs-Arias, Pere, additional, Íñiguez-Muñoz, Sandra, additional, Baker, Jennifer L., additional, Marzese, Diego M., additional, and DiNome, Maggie L., additional
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- 2023
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38. ASO Visual Abstract: Establishing Novel Molecular Subtypes of Appendiceal Cancer
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Garland-Kledzik, Mary, Scholer, Anthony, Ensenyat-Mendez, Miquel, Orozco, Javier I. J., Khader, Adam, Santamaria-Barria, Juan, Fischer, Trevan, Pigazzi, Alessio, and Marzese, Diego M.
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- 2022
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39. Biological effects of intraoperative radiation therapy: histopathological changes and immunomodulation in breast cancer patients.
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Orozco, Javier I. J., Valdez, Betsy J., Matsuba, Chikako, Simanonok, Michael P., Ensenyat-Mendez, Miquel, Ramiscal, Judi Anne B., Salomon, Matthew P., Yuki Takasumi, and Grumley, Janie G.
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PHYSIOLOGICAL effects of radiation ,INTRAOPERATIVE radiotherapy ,HORMONE receptor positive breast cancer ,BREAST cancer ,CANCER patients ,APOPTOSIS ,IMMUNOREGULATION - Abstract
Introduction: Intraoperative radiation therapy (IORT) delivers a single accelerated radiation dose to the breast tumor bed during breast-conserving surgery (BCS). The synergistic biologic effects of simultaneous surgery and radiation remain unclear. This study explores the cellular and molecular changes induced by IORT in the tumor microenvironment and its impact on the immune response modulation. Methods: Patients with hormone receptor (HR)-positive/HER2-negative, ductal carcinoma in situ (DCIS), or early-stage invasive breast carcinoma undergoing BCS with margin re-excision were included. Histopathological evaluation and RNA-sequencing in the re-excision tissue were compared between patients with IORT (n=11) vs. non-IORT (n=11). Results: Squamous metaplasia with atypia was exclusively identified in IORT specimens (63.6%, p=0.004), mimicking DCIS. We then identified 1,662 differentially expressed genes (875 upregulated and 787 downregulated) between IORT and non-IORT samples. Gene ontology analyses showed that IORT was associated with the enrichment of several immune response pathways, such as inflammatory response, granulocyte activation, and T-cell activation (p<0.001). When only considering normal tissue from both cohorts, IORT was associated with intrinsic apoptotic signaling, response to gamma radiation, and positive regulation of programmed cell death (p<0.001). Using the xCell algorithm, we inferred a higher abundance of gd T-cells, dendritic cells, and monocytes in the IORT samples. Conclusion: IORT induces histological changes, including squamous metaplasia with atypia, and elicits molecular alterations associated with immune response Frontiers in Immunology frontiersin. and intrinsic apoptotic pathways. The increased abundance of immune-related components in breast tissue exposed to IORT suggests a potential shift towards active immunogenicity, particularly immune-desert tumors like HR-positive/ HER2-negative breast cancer. [ABSTRACT FROM AUTHOR]
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- 2024
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40. La colección de arqueología del Casal de Cultura de Sóller
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Jaume Deyà Miró and Josep F. Ensenyat Alcover
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bartomeu enseñat ,prehistoria. mallorca ,sala arqueología ,History of the arts ,NX440-632 ,Museums. Collectors and collecting ,AM1-501 - Abstract
El Museo de Sóller (Mallorca) conserva una importante colección de arqueología que permite tener una visión histórica desde la llegada de los primeros humanos a nuestro valle hasta la Edad Media. La gran parte de su fondo arqueológico está formado por donaciones de particulares, destacando la del arqueólogo Bartomeu Enseñat y de sus colaboradores como Antoni Estades, Guillem Rullan, Antoni Matheu y Pere Suau, entre otros. Gracias a ello esta entidad dispone de una sala dedicada a la prehistoria del valle y de su entorno.
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- 2017
41. The Effect of an Accelerated Renal Replacement Therapy Initiation Is Not Modified by Baseline Risk
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Federico Angriman, Bruno L. Ferreyro, Natalia Angeloni, Bruno R. da Costa, Ron Wald, Sean M. Bagshaw, Neill K.J. Adhikari, Rinaldo Bellomo, Didier Dreyfuss, Bin Du, Martin P. Gallagher, Stéphane Gaudry, François Lamontagne, Michael Joannidis, Kathleen D. Liu, Daniel F. McAuley, Shay P. McGuinness, Alistair D. Nichol, Marlies Ostermann, Paul M. Palevsky, Haibo Qiu, Ville Pettilä, Antoine G. Schneider, Orla M. Smith, Suvi T. Vaara, Matthew Weir, Glenn M. Eastwood, Leah Peck, Helen Young, Peter Kruger, Gordon Laurie, Emma Saylor, Jason Meyer, Ellen Venz, Krista Wetzig, Craig French, Forbes McGain, John Mulder, Gerard Fennessy, Sathyajith Koottayi, Samantha Bates, Miriam Towns, Rebecca Morgan, Anna Tippett, Andrew Udy, Chris Mason, Elisa Licari, Dashiell Gantner, Jason McClure, Alistair Nichol, Phoebe McCracken, Jasmin Board, Emma Martin, Shirley Vallance, Meredith Young, Chelsey Vladic, Steve McGloughlin, David Gattas, Heidi Buhr, Jennifer Coles, Debra Hutch, James Wun, Louise Cole, Christina Whitehead, Julie Lowrey, Kristy Masters, Rebecca Gresham, Victoria Campbell, David Gutierrez, Jane Brailsford, Loretta Forbes, Lauren Murray, Teena Maguire, Martina NiChonghaile, Neil Orford, Allison Bone, Tania Elderkin, Tania Salerno, Tim Chimunda, Jason Fletcher, Emma Broadfield, Sanjay Porwal, Cameron Knott, Catherine Boschert, Julie Smith, Angus Richardson, Dianne Hill, Graeme Duke, Peter Oziemski, Santiago Cegarra, Peter Chan, Deborah Welsh, Stephanie Hunter, Owen Roodenburg, John Dyett, Nicos Kokotsis, Max Moser, Yang Yang, Laven Padayachee, Joseph Vetro, Himangsu Gangopadhyay, Melissa Kaufman, Angaj Ghosh, Simone Said, Alpesh Patel, Shailesh Bihari, Elisha Matheson, Xia Jin, Tapaswi Shrestha, Kate Schwartz, Rosalba Cross, Winston Cheung, Helen Wong, Mark Kol, Asim Shah, Amanda Y. Wang, Zoltan Endre, Celia Bradford, Pierre Janin, Simon Finfer, Naomi Diel, Jonathan Gatward, Naomi Hammond, Anthony Delaney, Frances Bass, Elizabeth Yarad, Hergen Buscher, Claire Reynolds, Nerilee Baker, Romuald Bellmann, Andreas Peer, Julia Hasslacher, Paul Koglberger, Sebastian Klein, Klemens Zotter, Anna Brandtner, Armin Finkenstedt, Adelheid Ditlbacher, Frank Hartig, Dietmar Fries, Mirjam Bachler, Bettina Schenk, Martin Wagner, Philipp Eller, Thomas Staudinger, Esther Tiller, Peter Schellongowski, Andja Bojic, Eric A. Hoste, Stephanie Bracke, Luc De Crop, Daisy Vermeiren, Fernando Thome, Bianca Chiella, Lucia Fendt, Veronica Antunes, Frédérick D'Aragon, Charles St-Arnaud, Michael Mayette, Élaine Carbonnaeu, Joannie Marchand, Marie-Hélène Masse, Marilène Ladouceur, Alexis F. Turgeon, François Lauzier, David Bellemare, Charles Langis Francoeur, Guillaume LeBlanc, Gabrielle Guilbault, Stéphanie Grenier, Eve Cloutier, Annick Boivin, Charles Delisle-Thibault, Panagiota Giannakouros, Olivier Costerousse, Jean-François Cailhier, François-Martin Carrier, Ali Ghamraoui, Martine Lebrasseur, Fatna Benettaib, Maya Salamé, Dounia Boumahni, Ying Tung Sia, Jean-François Naud, Isabelle Roy, Henry T. Stelfox, Stacey Ruddell, Braden J. Manns, Shelley Duggan, Dominic Carney, Jennifer Barchard, Richard P. Whitlock, Emilie Belley-Cote, Nevena Savija, Alexandra Sabev, Troy Campbell, Thais Creary, Kelson Devereaux, Shira Brodutch, Claudio Rigatto, Bojan Paunovic, Owen Mooney, Anna Glybina, Oksana Harasemiw, Michelle Di Nella, John Harmon, Navdeep Mehta, Louis Lakatos, Nicole Haslam, Francois Lellouche, Mathieu Simon, Ying Tung, Patricia Lizotte, Pierre-Alexandre Bourchard, Bram Rochwerg, Tim Karachi, Tina Millen, John Muscedere, David Maslove, J. Gordon Boyd, Stephanie Sibley, John Drover, Miranda Hunt, Ilinca Georgescu, Randy Wax, Ilan Lenga, Kavita Sridhar, Andrew Steele, Kelly Fusco, Taneera Ghate, Michael Tolibas, Holly Robinson, Matthew A. Weir, Ravi Taneja, Ian M. Ball, Amit Garg, Eileen Campbell, Athena Ovsenek, Sean van Diepen, Nadia Baig, Sheldon Magder, Han Yao, Ahsan Alam, Josie Campisi, Erika MacIntyre, Ella Rokosh, Kimberly Scherr, Stephen Lapinsky, Sangeeta Mehta, Sumesh Shah, Daniel J. Niven, Michael Russell, Kym Jim, Gillian Brown, Kerry Oxtoby, Adam Hall, Luc Benoit, Colleen Sokolowski, Bhanu Prasad, Jag Rao, Shelley Giebel, Demetrios J. Kutsogiannis, Patricia Thompson, Tayne Thompson, Robert Cirone, Kanthi Kavikondala, Mark Soth, France Clarke, Alyson Takaoka, David Mazer, Karen Burns, Jan Friedrich, David Klein, Gyan Sandhu, Marlene Santos, Imrana Khalid, Jennifer Hodder, Peter Dodek, Najib Ayas, Victoria Alcuaz, Gabriel Suen, Oleksa Rewa, Gurmeet Singh, Sean Norris, Neil Gibson, Castro Arias, Aysha Shami, Celine Pelletier, Alireza Zahirieh, Andre Amaral, Nicole Marinoff, Navjot Kaur, Adic Perez, Jane Wang, Gregory Haljan, Christopher Condin, Lauralyn McIntyre, Brigette Gomes, Rebecca Porteous, Irene Watpool, Swapnil Hiremath, Edward Clark, Margaret S. Herridge, Felicity Backhouse, M. Elizabeth Wilcox, Karolina Walczak, Vincent Ki, Asheer Sharman, Martin Romano, R.T. Noel Gibney, Adam S. Romanovsky, Lorena McCoshen, Gordon Wood, Daniel Ovakim, Fiona Auld, Gayle Carney, Meili Duan, Xiaojun Ji, Dongchen Guo, Zhili Qi, Jin Lin, Meng Zhang, Lei Dong, Jingfeng Liu, Pei Liu, Deyuan Zhi, Guoqiang Bai, Yu Qiu, Ziqi Yang, Jing Bai, Zhuang Liu, Haizhou Zhuang, Haiman Wang, Jian Li, Mengya Zhao, Xiao Zhou, Xianqing Shi, Baning Ye, Manli Liu, Jing Wu, Yongjian Fu, Dali Long, Yu Pan, Jinlong Wang, Huaxian Mei, Songsong Zhang, Mingxiang Wen, Enyu Yang, Sijie Mu, Jianquan Li, Tingting Hu, Bingyu Qin, Min Li, Cunzhen Wang, Xin Dong, Kaiwu Wang, Haibo Wang, Jianxu Yang, Chuanyao Wang, Dongxin Wang, Nan Li, Zhui Yu, Song Xu, Lan Yao, Guo Hou, Zhou Liu, Liping Lu, Yingtao Lian, Chunting Wang, Jichen Zhang, Ruiqi Ding, Guoqing Qi, Qizhi Wang, Peng Wang, Zhaoli Meng, Man Chen, Xiaobo Hu, Xiandi He, Shibing Zhao, Lele Hang, Rui Li, Suhui Qin, Kun Lu, Shijuan Dun, Cheng Liu, Qi Zhou, Zhenzhen Chen, Jing Mei, Minwei Zhang, Hao Xu, Jincan Lin, Qindong Shi, Lijuan Fu, Qinjing Zeng, Hongye Ma, Jinqi Yan, Lan Gao, Hongjuan Liu, Lei Zhang, Hao Li, Xiaona He, Jingqun Fan, Litao Guo, Yu Liu, Xue Wang, Jingjing Sun, Zhongmin Liu, Juan Yang, Lili Ding, Lulu Sheng, Xingang Liu, Jie Yan, Quihui Wang, Yifeng Wang, Dan Zhao, Shuangping Zhao, Chenghuan Hu, Jing Li, Fuxing Deng, Haibo Qui, Yi Yang, Min Mo, Chun Pan, Changde Wu, Yingzi Huang, Lili Huang, Airan Liu, Anna-Maija Korhonen, Sanna Törnblom, Sari Sutinen, Leena Pettilä, Jonna Heinonen, Eliria Lappi, Taria Suhonen, Sari Karlsson, Sanna Hoppu, Ville Jalkanen, Anne Kuitunen, Markus Levoranta, Jaakko Långsjö, Sanna Ristimäki, Kaisa Malila, Anna Wootten, Simo Varila, Mikko J Järvisalo, Outi Inkinen, Satu Kentala, Keijo Leivo, Paivi Haltia, Jean-Damien Ricard, Jonathan Messika, Abirami Tiagarajah, Malo Emery, Aline Dechanet, Coralie Gernez, Damien Roux, Laurent Martin-Lefevre, Maud Fiancette, Isabelle Vinatier, Jean Claude Lacherade, Gwenhaël Colin, Christine Lebert, Marie-Ange Azais, Aihem Yehia, Caroline Pouplet, Matthieu Henry- Lagarrigue, Amélie Seguin, Laura Crosby, Julien Maizel, Dimitri Titeca-Beauport, Alain Combes, Ania Nieszkowska, Paul Masi, Alexandre Demoule, Julien Mayaux, Martin Dres, Elise Morawiec, Maxens Decalvele, Suela Demiri, Morgane Faure, Clémence Marios, Maxime Mallet, Marie Amélie Ordon, Laura Morizot, Marie Cantien, François Pousset, Florent Poirson, Yves Cohen, Laurent Argaud, Martin Cour, Laurent Bitker, Marie Simon, Romain Hernu, Thomas Baudry, Sylvie De La Salle, Adrien Robine, Nicholas Sedillot, Xavier Tchenio, Camille Bouisse, Sylvie Roux, Fabienne Tamion, Steven Grangé, Dorothée Carpentier, Guillaume Chevrel, Luis Ensenyat-Martin, Sophie Marque, Jean-Pierre Quenot, Pascal Andreu, Auguste Dargent, Audrey Large, Nicolas Chudeau, Mickael Landais, Benoit Derrien, Jean Christophe Callahan, Christophe Guitton, Charlène Le Moal, Alain Robert, Karim Asehnoune, Raphaël Cinotti, Nicolas Grillot, Dominique Demeure, Christophe Vinsonneau, Imen Rahmani, Mehdi Marzouk, Thibault Dekeyser, Caroline Sejourne, Mélanie Verlay, Fabienne Thevenin, Lucie Delecolle, Didier Thevenin, Bertrand Souweine, Elisabeth Coupez, Mireille Adda, Jean-Pierre Eraldi, Antoine Marchalot, Nicolas De Prost, Armand Mekontso Dessap, Keyvan Razazi, Ferhat Meziani, Julie Boisrame-Helms, Raphael Clere-Jehl, Xavier Delabranche, Christine Kummerlen, Hamid Merdji, Alexandra Monnier, Yannick Rabouel, Hassene Rahmani, Hayat Allam, Samir Chenaf, Vincenta Franja, Bertrand Pons, Michel Carles, Frédéric Martino, Régine Richard, Benjamin Zuber, Guillaume Lacave, Karim Lakhal, Bertrand Rozec, Hoa Dang Van, Éric Boulet, Fouad Fadel, Cedric Cleophax, Nicolas Dufour, Caroline Grant, Marie Thuong, Jean Reignier, Emmanuel Canet, Laurent Nicolet, Thierry Boulain, Mai-Anh Nay, Dalila Benzekri, François Barbier, Anne Bretagnol, Toufik Kamel, Armelle Mathonnet, Grégoire Muller, Marie Skarzynski, Julie Rossi, Amandine Pradet, Sandra Dos Santos, Aurore Guery, Lucie Muller, Luis Felix, Julien Bohé, Guillaume Thiéry, Nadia Aissaoui, Damien Vimpere, Morgane Commeureuc, Jean-Luc Diehl, Emmanuel Guerot, Orfeas Liangos, Monika Wittig, Alexander Zarbock, Mira Küllmar, Thomas van Waegeningh, Nadine Rosenow, Kathy Brickell, Peter Doran, Patrick T. Murray, Giovanni Landoni, Rosalba Lembo, Alberto Zangrillo, Giacomo Monti, Margherita Tozzi, Matteo Marzaroli, Gaetano Lombardi, Gianluca Paternoster, Michelangelo Vitiello, Shay McGuinness, Rachael Parke, Magdalena Butler, Eileen Gilder, Keri-Anne Cowdrey, Samantha Wallace, Jane Hallion, Melissa Woolett, Philippa Neal, Karina Duffy, Stephanie Long, Colin McArthur, Catherine Simmonds, Yan Chen, Rachael McConnochie, Lynette Newby, David Knight, Seton Henderson, Jan Mehrtens, Stacey Morgan, Anna Morris, Kymbalee Vander Hayden, Tara Burke, Matthew Bailey, Ross Freebairn, Lesley Chadwick, Penelope Park, Christine Rolls, Liz Thomas, Ulrike Buehner, Erin Williams, Jonathan Albrett, Simon Kirkham, Carolyn Jackson, Troy Browne, Jennifer Goodson, David Jackson, James Houghton, Owen Callender, Vicki Higson, Owen Keet, Clive Dominy, Paul Young, Anna Hunt, Harriet Judd, Cassie Lawrence, Shaanti Olatunji, Yvonne Robertson, Charlotte Latimer-Bell, Deborah Hendry, Agnes Mckay-Vucago, Nina Beehre, Eden Lesona, Leanlove Navarra, Chelsea Robinson, Ryan Jang, Andrea Junge, Bridget Lambert, Michel Thibault, Philippe Eckert, Sébastien Kissling, Erietta Polychronopoulos, Elettra Poli, Marco Altarelli, Madeleine Schnorf, Samia Abed Mallaird, Claudia Heidegger, Aurelie Perret, Philippe Montillier, Frederic Sangla, Seigenthaller Neils, Aude De Watteville, Mandeep-Kaur Phull, Aparna George, Nauman Hussain, Tatiana Pogreban, Steve Lobaz, Alison Daniels, Mishell Cunningham, Deborah Kerr, Alice Nicholson, Pradeep Shanmugasundaram, Judith Abrams, Katarina Manso, Geraldine Hambrook, Elizabeth McKerrow, Juvy Salva, Stephen Foulkes, Matthew Wise, Matt Morgan, Jenny Brooks, Jade Cole, Tracy Michelle Davies, Helen Hill, Emma Thomas, Marcela Vizcaychipi, Behrad Baharlo, Jaime Carungcong, Patricia Costa, Laura Martins, Ritoo Kapoor, Tracy Hazelton, Angela Moon, Janine Musselwhite, Ben Shelley, Philip McCall, Gill Arbane, Aneta Bociek, Martina Marotti, Rosario Lim, Sara Campos, Neus Grau Novellas, Armando Cennamo, Andrew Slack, Duncan Wyncoll, Luigi Camporota, Simon Sparkes, Rosalinde Tilley, Austin Rattray, Gayle Moreland, Jane Duffy, Elizabeth McGonigal, Philip Hopkins, Clare Finney, John Smith, Harriet Noble, Hayley Watson, Claire-Louise Harris, Emma Clarey, Eleanor Corcoran, James Beck, Clare Howcroft, Nora Youngs, Elizabeth Wilby, Bethan Ogg, Adam Wolverson, Sandra Lee, Susie Butler, Maryanne Okubanjo, Julia Hindle, Ingeborg Welters, Karen Williams, Emily Johnson, Julie Patrick-Heselton, David Shaw, Victoria Waugh, Richard Stewart, Esther Mwaura, Lynn Wren, Louise Mew, Sara-Beth Sutherland, Jane Adderley, Jim Ruddy, Margaret Harkins, Callum Kaye, Teresa Scott, Wendy Mitchell, Felicity Anderson, Fiona Willox, Vijay Jagannathan, Michele Clark, Sarah Purv, Andrew Sharman, Megan Meredith, Lucy Ryan, Louise Conner, Cecilia Peters, Dan Harvey, Ashraf Roshdy, Amy Collins, Malcolm Sim, Steven Henderson, Nigel Chee, Sally Pitts, Katie Bowman, Maria Dilawershah, Luke Vamplew, Elizabeth Howe, Paula Rogers, Clara Hernandez, Clara Prendergast, Jane Benton, Alex Rosenberg, Lui G. Forni, Alice Grant, Paula Carvelli, Ajay Raithatha, Sarah Bird, Max Richardson, Matthew Needham, Claire Hirst, Jonathan Ball, Susannah Leaver, Luisa Howlett, Carlos Castro Delgado, Sarah Farnell-Ward, Helen Farrah, Geraldine Gray, Gipsy Joseph, Francesca Robinson, Ascanio Tridente, Clare Harrop, Karen Shuker, Derek McLaughlan, Judith Ramsey, Sharon Meehan, Bernd Oliver Rose, Rosie Reece-Anthony, Babita Gurung, Tony Whitehouse, Catherine Snelson, Tonny Veenith, Andy Johnston, Lauren Cooper, Ron Carrera, Karen Ellis, Emma Fellows, Samanth Harkett, Colin Bergin, Elaine Spruce, Liesl Despy, Stephanie Goundry, Natalie Dooley, Tracy Mason, Amy Clark, Gemma Dignam, Geraldine Ward, Ben Attwood, Penny Parsons, Sophie Mason, Michael Margarson, Jenny Lord, Philip McGlone, Luke E. Hodgson, Indra Chadbourn, Raquel Gomez, Jordi Margalef, Rinus Pretorius, Alexandra Hamshere, Joseph Carter, Hazel Cahill, Lia Grainger, Kate Howard, Greg Forshaw, Zoe Guy, Kianoush B. Kashani, Robert C. Albright, Amy Amsbaugh, Anita Stoltenberg, Alexander S. Niven, Matthew Lynch, AnnMarie O'Mara, Syed Naeem, Sairah Sharif, Joyce McKenney Goulart, Ashita Tolwani, Claretha Lyas, Laura Latta, Azra Bihorac, Haleh Hashemighouchani, Philip Efron, Matthew Ruppert, Julie Cupka, Sean Kiley, Joshua Carson, Peggy White, George Omalay, Sherry Brown, Laura Velez, Alina Marceron, Javier A. Neyra, Juan Carlos Aycinena, Madona Elias, Victor M. Ortiz-Soriano, Caroline Hauschild, and Robert Dorfman
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Renal Replacement Therapy ,Pulmonary and Respiratory Medicine ,Critical Illness ,Medicine and Health Sciences ,Humans ,Acute Kidney Injury - Published
- 2022
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42. Llull, a traveller in the service of the Faith.
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Ensenyat, G., primary
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- 2019
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43. The Balearic Copper Age in the context of West Mediterranean archaeology
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Ensenyat Alcover, Josep F.
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930.1 ,Archaeology - Published
- 1993
44. Metabolic risk management, physical exercise and lifestyle counselling in low-active adults: controlled randomized trial (BELLUGAT)
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Assumpta Ensenyat, Gemma Espigares-Tribo, Leonardo Machado, Francisco José Verdejo, Rosa Rodriguez-Arregui, José Serrano, Marta Miret, Gisela Galindo, Alfonso Blanco, Josep-Ramon Marsal, Susana Sarriegui, Xenia Sinfreu-Bergues, and Noemi Serra-Paya
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Public aspects of medicine ,RA1-1270 - Abstract
Abstract Background The primary aim of this study is to evaluate the effectiveness of different doses (intensity) of supervised exercise training — concomitant with lifestyle counselling — as a primary care intervention tool for the management of metabolic syndrome risk factors in low-active adults with one or more such factors (programme name in Catalan: Bellugat de CAP a peus). Methods/Design Three-arm, randomized controlled clinical trial implemented in the primary care setting, with a duration of 40 weeks (16 weeks intervention and 24-week follow-up). Adults aged 30 to 55 years with metabolic risk factors will be randomized into three intervention groups: 1) aerobic interval training (16 supervised training lessons) plus a healthy lifestyle counselling programme (6 group and 3 individual meetings); 2) low-to-moderate intensity continuous training (16 supervised training lessons) plus the same counselling programme; or 3) the counselling- programme without any supervised physical exercise. The main output variables assessed will be risk factors for metabolic syndrome (waist circumference, blood pressure, and levels of plasma triglycerides, high-density lipoproteins and glucose), systemic inflammation, cardiorespiratory fitness, physical activity and sedentary behaviour, dietary habits, health-related quality of life, self-efficacy and empowerment. Economic factors will also be analysed in order to determine the cost-effectiveness of the programme. These variables will be assessed three times during the study: at baseline, at the end of the intervention, and at follow-up. We estimate to recruit 35 participants per group. Discussion The results of this study will provide insight into the immediate and medium-term effects on metabolic risk and lifestyle of a combined approach involving aerobic interval training and a multidisciplinary behavioural intervention. If effective, the proposed intervention would provide both researchers and practitioners in this field with a platform on which to develop similar intervention programmes for tackling the repercussions of an unhealthy lifestyle. Trial registration Clinical trials.gov. NTC02832453 . Registered 6 July 2016 (retrospectively registered).
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- 2017
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45. 3-D chromatin conformation, accessibility, and gene expression profiling of triple-negative breast cancer
- Author
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Llinàs-Arias, Pere, Ensenyat-Méndez, Miquel, Orozco, Javier I.J., Íñiguez-Muñoz, Sandra, Valdez, Betsy, Wang, Chuan, Mezger, Anja, Choi, Eun Kyoung, Tran, Yan Zhou, Yao, Liqun, Bonath, Franziska, Olsen, Remi André, Ormestad, Mattias, Esteller, Manel, Lupien, Mathieu, Marzese, Diego M., Llinàs-Arias, Pere, Ensenyat-Méndez, Miquel, Orozco, Javier I.J., Íñiguez-Muñoz, Sandra, Valdez, Betsy, Wang, Chuan, Mezger, Anja, Choi, Eun Kyoung, Tran, Yan Zhou, Yao, Liqun, Bonath, Franziska, Olsen, Remi André, Ormestad, Mattias, Esteller, Manel, Lupien, Mathieu, and Marzese, Diego M.
- Abstract
Objectives: Triple-negative breast cancer (TNBC) is a highly aggressive breast cancer subtype with limited treatment options. Unlike other breast cancer subtypes, the scarcity of specific therapies and greater frequencies of distant metastases contribute to its aggressiveness. We aimed to find epigenetic changes that aid in the understanding of the dissemination process of these cancers. Data description: Using CRISPR/Cas9, our experimental approach led us to identify and disrupt an insulator element, IE8, whose activity seemed relevant for cell invasion. The experiments were performed in two well-established TNBC cellular models, the MDA-MB-231 and the MDA-MB-436. To gain insights into the underlying molecular mechanisms of TNBC invasion ability, we generated and characterized high-resolution chromatin interaction (Hi-C) and chromatin accessibility (ATAC-seq) maps in both cell models and complemented these datasets with gene expression profiling (RNA-seq) in MDA-MB-231, the cell line that showed more significant changes in chromatin accessibility. Altogether, our data provide a comprehensive resource for understanding the spatial organization of the genome in TNBC cells, which may contribute to accelerating the discovery of TNBC-specific alterations triggering advances for this devastating disease., QC 20231120
- Published
- 2023
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- View/download PDF
46. Ús de la metodologia d'Aprenentatge Basat en Problemes (ABP) per treballar amb l'alumnat de primer d'ESO en l'assignatura de Tecnologia des d'un punt de vista inclusiu
- Author
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Universitat Politècnica de Catalunya. Departament d'Enginyeria Electrònica, Robert Sanxis, Francesc Josep, Sadurní Ensenyat, Miquel, Universitat Politècnica de Catalunya. Departament d'Enginyeria Electrònica, Robert Sanxis, Francesc Josep, and Sadurní Ensenyat, Miquel
- Abstract
El context educatiu actual es troba en un període on s'ha d'anar produint un buidatge progressiu dels Centres d'Educació Especial (CEE) per tal de que l'alumnat amb Necessitats Específiques de Suport Educatiu (NESE) que provenen d'aquests centres es vagi incorporant en els centres ordinaris. Per tant, cada cop serà més important tenir present la inclusió a l'hora de programar una unitat didàctica o una situació d'aprenentatge. En aquest treball es pretén desenvolupar una situació d'aprenentatge on es contempli l'ús de metodologies actives, en específic la metodologia d'aprenentatge basat en problemes (ABp), per tal d'afavorir la inclusió dins de l'aula. A l'hora d'elaborar la situació d'aprenentatge es prendrà com a marc de referència les pautes i punts de verificació que facilita el Disseny Universal per a l'Aprenentatge (DUA), els quals promouen la inclusió.
- Published
- 2023
47. Exploring the Genomic Landscape of Hepatobiliary Cancers to Establish a Novel Molecular Classification System.
- Author
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Scholer, Anthony J., Marcus, Rebecca K., Garland-Kledzik, Mary, Ghosh, Debopriya, Ensenyat-Mendez, Miquel, Germany, Joshua, Santamaria-Barria, Juan A., Khader, Adam, Orozco, Javier I. J., and Goldfarb, Melanie
- Subjects
LIVER tumors ,BILE duct tumors ,MACHINE learning ,GENOMICS ,DESCRIPTIVE statistics ,ALGORITHMS - Abstract
Simple Summary: Machine learning identified hepatobiliary molecular subtypes with overlapping oncogenomic pathways independent of traditional cancer taxonomy. This new classification system identified tumor biology features that may affect future hepatobiliary staging systems and lead to the improved selection of oncologic treatment plans. Taxonomy of hepatobiliary cancer (HBC) categorizes tumors by location or histopathology (tissue of origin, TO). Tumors originating from different TOs can also be grouped by overlapping genomic alterations (GA) into molecular subtypes (MS). The aim of this study was to create novel HBC MSs. Next-generation sequencing (NGS) data from the AACR-GENIE database were used to examine the genomic landscape of HBCs. Machine learning and gene enrichment analysis identified MSs and their oncogenomic pathways. Descriptive statistics were used to compare subtypes and their associations with clinical and molecular variables. Integrative analyses generated three MSs with different oncogenomic pathways independent of TO (n = 324; p < 0.05). HC-1 "hyper-mutated-proliferative state" MS had rapidly dividing cells susceptible to chemotherapy; HC-2 "adaptive stem cell-cellular senescence" MS had epigenomic alterations to evade immune system and treatment-resistant mechanisms; HC-3 "metabolic-stress pathway" MS had metabolic alterations. The discovery of HBC MSs is the initial step in cancer taxonomy evolution and the incorporation of genomic profiling into the TNM system. The goal is the development of a precision oncology machine learning algorithm to guide treatment planning and improve HBC outcomes. Future studies should validate findings of this study, incorporate clinical outcomes, and compare the MS classification to the AJCC 8th staging system. [ABSTRACT FROM AUTHOR]
- Published
- 2024
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48. Llibra dels feits.
- Author
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Pujol, Gabriel Ensenyat
- Published
- 2024
49. Valoración objetiva de la actividad física en las sesiones de ejercicio físico de un programa multidisciplinar para el tratamiento de la obesidad infanti
- Author
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Assumpta Ensenyat, Ignasi Palacios, Noemi Serra-Paya, and Ivan Castro-Viñuales
- Subjects
actividad física ,obesidad infantil ,acelerometría ,gasto energético ,Special aspects of education ,LC8-6691 ,Sports ,GV557-1198.995 - Abstract
Antecedentes. La inclusión de ejercicio físico supervisado en las intervenciones para el tratamiento de la obesidad infantil es uno de los factores que puede determinar su eficacia. No obstante, aunque las sesiones hayan sido planificadas según las recomendaciones, la respuesta real de los niños/niñas no siempre ha sido cuantificada. La finalidad del trabajo fue analizar el grado de movimiento y estimar el gasto energético durante las sesiones de ejercicio físico de una intervención para el tratamiento de la obesidad infantil. Metodología. Participaron 41 niños/niñas de 8 a 12 años, obesos y poco activos, a los se midió, mediante acelerómetros, el grado de movimiento global y el tiempo dedicado a diferentes niveles de intensidad de esfuerzo (sedentaria, ligera, moderada-vigorosa) y el patrón de las conductas sedentarias y de actividad física durante las sesiones de ejercicio físico de la intervención. Resultados. Las sesiones de 60 minutos de duración, se caracterizan por periodos cortos de moderada-vigorosa intensidad interrumpidos por periodos cortos de menor intensidad de movimiento. Los participantes dedicaron un 58,3% del tiempo a actividades de moderada-vigorosa intensidad, un 30% a actividades de ligera intensidad y solamente un 11.8% del tiempo a conductas sedentarias. Para el conjunto de las sesiones, y en particular a las de fútbol, el gasto energético de los niños fue superior al de las niñas. Conclusiones. El programa de intervención ofrece la oportunidad de aumentar los minutos semanales dedicados a actividad física de moderada y vigorosa intensidad y de incrementar el gasto energético.
- Published
- 2016
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50. How Important is Focalizing on a Healthier Lunch at School?
- Author
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Serra-Paya, Noemí, Ensenyat, Assumpta, Serra-Paya, Pau, and Blanco-Nespereira, Alfonso
- Published
- 2015
- Full Text
- View/download PDF
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