1,306 results on '"A Annex"'
Search Results
2. Report from the 2023 workshop on endothelial permeability, edema and inflammation
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Vestweber, Dietmar, Claesson-Welsh, Lena, McDonald, Donald M, Williams, Timothy, Schwartz, Martin A, Scallan, Joshua, Gavins, Felicity NE, van Buul, Jaap, Gamble, Jennifer, Vadas, Matthew, Annex, Brian H, Messe, Steven R, Perretti, Mauro, André, Helder, Ferrara, Napoleone, Hla, Timothy, Nourshargh, Sussan, and Simons, Michael
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Medical Physiology ,Biomedical and Clinical Sciences ,Rare Diseases ,Cardiovascular - Published
- 2023
3. Contrast-Enhanced Ultrasound of Mouse Models of Hindlimb Ischemia Reveals Persistent Perfusion Deficits and Distinctive Muscle Perfusion Patterns
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Becker, Alyssa B., Chen, Lanlin, Hossack, John A., Klibanov, Alexander L., Annex, Brian H., and French, Brent A.
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- 2025
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4. Abstract 4141751: Exercise-Induced Improvements in Capillary Density are Influenced by Sex, Hormone Replacement Therapy, and Exercise Intensity
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Dagher, Anna-Maria, Collins, Katherine, Ross, Leanna, Duscha, Brian, Houmard, Joseph, Annex, Brian, and Kraus, William
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- 2024
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5. Sustainable municipal landfill leachate management: Current practices, challenges, and future directions
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Igwegbe, Chinenye Adaobi, López-Maldonado, Eduardo Alberto, Landázuri, Andrea C., Ovuoraye, Prosper Eguono, Ogbu, Annex Ifeanyi, Vela-García, Nicolás, and Białowiec, Andrzej
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- 2024
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6. Co-relation of Portal Vein Tumour Thrombus Response With Survival Function Following Robotic Radiosurgery in Vascular Invasive Hepatocellular Carcinoma
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Dutta, Debnarayan, Yarlagadda, Sreenija, Kalavagunta, Sruthi, Nair, Haridas, Sasidharan, Ajay, Nimmya, Sathish Kumar, Kannan, Rajesh, George, Shibu, Edappattu, Annex, Haridas, Nikhil K., Jose, Wesley M., Keechilat, Pavithran, Valsan, Arun, Koshy, Anoop, Gopalakrishna, Rajesh, Sadasivan, Shine, Gopalakrishnan, Unnikrishnan, Balakrishnan, Dinesh, Sudheer, Othiyil Vayoth, and Surendran, Sudhindran
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- 2024
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7. Functionality and mechanistic parametric study of the potential of waste plantain peels and commercial bentonite for soybean oil refining
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Annex Ifeanyi Ogbu, Prosper Eguono Ovuoraye, Regina Obiageli Ajemba, and Mohammad Hadi Dehghani
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Medicine ,Science - Abstract
Abstract The consumption of unrefined vegetable oil poses acute and chronic health issues, yet improper disposal of waste plantain peels is not environmentally sustainable. This research investigates the feasibility, mechanism and thermodynamics of waste plantain peels, and commercial bentonite clay for soybean oil refining. Experiment was carried out using masses (1–4 g) of commercial bentonite clay, and unripe plantain peel ash (UPPA) to degummed and neutralized free fatty acid (FFA) contents in crude soybean oil at varying temperatures (50–120 °C), and time (15–35 min) for treatment of soybean oil. FTIR spectroscopy, SEM, and XRF techniques were applied to characterize the sample. The results established that at optimum 4.0 g dosage, the UPPA (97.73%) was more effective in the removal of FFA from oil at 50 °C and 20 min, while the clay (90%) was more effective in the removal of colour pigment from the vegetable oil 100 °C, and 25 min. The optimum efficiency of Clay-Ash-composite (70:30) in adsorbing pigment from soybean oil corresponds to 80%. The impact of changing viscosities, densities, and acid values on the performance of UPPA, clay, and clay-UPPA composite was investigated. Mechanistic studies confirmed the pseudo-second-order kinetics at 5 × 10–2 g/mg min−1 and 1.87 × 10–1 g/mg min−1, with corresponding adsorption capacity of 30.40 mg/g and 4.91 mg/g, at R2 ≤ 0.9982. The UPPA-driven sorption of FFA occurred as a physisorption and exothermic process (− 620.60 kJ/mol), while colour pigment removal occurred by chemisorption and endothermic process (22.40 kJ/mol). The finding recommends UPPA and composite as economically feasible for refining soybean oil.
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- 2023
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8. The impact of perioperative stroke and delirium on outcomes after surgical aortic valve replacement
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Miller, Marissa A., Taddei-Peters, Wendy C., Jeffries, Neal O., Buxton, Dennis, Geller, Nancy L., Gordon, David, Burke, Catherine, Lee, Albert, Smith, Tyrone, Moy, Claudia S., Gombos, Ilana Kogan, Weisel, Richard, Gardner, Timothy J., O'Gara, Patrick T., Rose, Eric A., Gelijns, Annetine C., Parides, Michael K., Ascheim, Deborah D., Moskowitz, Alan J., Bagiella, Emilia, Moquete, Ellen, Shah, Kinjal, Overbey, Jessica R., Pan, Stephanie, Chang, Helena, Chase, Melissa, Goldfarb, Seth, Gupta, Lopa, Kirkwood, Katherine, Dobrev, Edlira, Levitan, Ron, O'Sullivan, Karen, Santos, Milerva, Ye, Xia, Mack, Michael, Winkle, Rachelle, Boswell, Haley, Fenlon, Amanda, Johnson, Melissa, Jones, Jessica, Kolb, Megan, Lam, Sarah, Miranda, Lucy, Ward, Jackie, Whitman, Renessa, Zingler, Brittany, Ryan, William, Smith, Robert L., Grayburn, Paul, Nosnik, Pedro, Gillinov, A. Marc, Blackstone, Eugene H., Moazami, Nader, Starling, Randall C., Barzilai, Benico, Grimm, Richard A., Soltesz, Edward G., Katzan, Irene, Strippy, Brian, Smith, Shoi, Garcia, Michelle, Alice bowman, Mary, Geither, Carrie, Wang, Robert, Argenziano, Michael, Borger, Michael, Takayama, Hiroo, Leon, Martin B., Goldsmith, Lyn, Schwartz, Allan, Sookraj, Nadia, McCright-Gill, Talaya, Sreekanth, Sowmya, McCullough, Jock N., Iribarne, Alexander, DeSimone, Joseph P., DiScipio, Anthony W., Stokes, Henry, Ivany, Amanda St., Petty, Gaylin, Smith, Peter K., Alexander, John H., Milano, Carmelo A., Glower, Donald D., Huber, Joel, Morganlander, Joel, Mathew, Joseph P., Welsh, Stacey, Casalinova, Sarah, Johnson, Victoria, Lane, Kathleen, Smith, Derek, Tipton, Greg, Berry, Mark F., Williams, Judson B., Englum, Brian, Hartwig, Matthew, Thourani, Vinod H., Guyton, Robert, Lattouf, Omar, Chen, Edward, Vega, J. David, Baer, Jefferson, Nguyen, Duc, Halkos, Michael, Baio, Kim, Prince, Tamara, Cook, Natascha, Neill, Alexis A., Voisine, Pierre, Senechal, Mario, Dagenais, François, Laforce, Robert, Jr., O'Connor, Kim, Dussault, Gladys, Caouette, Manon, Tremblay, Hugo, Gagne, Nathalie, Dumont, Julie, Landry, Patricia, Groh, Mark A., Trichon, Benjamin H., Binns, Oliver A., Ely, Stephen W., Johnson, Alan M., Hansen, Todd H., Short, John G., Taylor, Reid D., Mangusan, Ralph, Nanney, Tracy, Aubart, Holly, Cross, Kristin, McPeters, Leslie, Riggsbee, Christina, Rixey, Lucy, Michler, Robert E., DeRose, Joseph J., Jr., Goldstein, Daniel J., Bello, Ricardo A., Taub, Cynthia, Spevack, Daniel, Kirchoff, Kathryn, Meli, Rebecca, Garcia, Juan, Goldenberg, Jon, Kealy, Lauren, Perrault, Louis P., Bouchard, Denis, Tanguay, Jean François, O'Meara, Eileen, Lacharité, Jonathan, Robichaud, Sophie, Horvath, Keith A., Corcoran, Philip C., Siegenthaler, Michael P., Murphy, Mandy, Iraola, Margaret, Greenberg, Ann, Kumkumian, Greg, Milner, Mark, Nadareishvili, Zurab, Whitson, Bryan A., Hasan, Ayesha, McDavid, Asia, Fadorsen, Denise, Ouzounian, Maral, Yau, Terry, Farkouh, Michael, Woo, Anna, Cusimano, Robert James, David, Tirone, Feindel, Christopher, Fumakia, Nishit, Christie, Shakira, Mullen, John C., Bissonauth, Asvina, Hripko, Alexandra, Gammie, James S., Noor, Zahid, Mackowick, Kristen, Deasey, Stephanie, Al-Suqi, Manal, Collins, Julia, Acker, Michael A., Messé, Steven, Kirkpatrick, James, Mayer, Mary Lou, McDonald, Caitlin, Fok, Holley, Maffei, Breanna, Cresse, Stephen, Gepty, Christine, Bowdish, Michael, Starnes, Vaughn A., Shavalle, David, Heck, Christi, Hackmann, Amy, Baker, Craig, Fleischman, Fernando, Cunningham, Mark, Lozano, Edward, Hernandez, Michelle, Ailawadi, Gorav, Kron, Irving L., Johnston, Karen, Ghanta, Ravi K., Dent, John M., Kern, John, Yarboro, Leora, Ragosta, Michael, Annex, Brian, Bergin, Jim, Burks, Sandra, Cosner, Mike, Green, China, Loya, Samantha, Kim, Hye Ryun, Bull, David A., Desvigne-Nickens, Patrice, Dixon, Dennis O., Gottesman, Rebecca, Haigney, Mark, Holubkov, Richard, Iadecola, Constantino, Jacobs, Alice, Meslin, Eric M., Murkin, John M., Spertus, John A., Sellke, Frank, McDonald, Cheryl L., Canty, John, Dickert, Neal, Ikonomidis, John S., Kim, KyungMann, Williams, David O., Yancy, Clyde W., Chaturvedi, Seemant, Chimowitz, Marc, Fang, James C., Richenbacher, Wayne, Rao, Vivek, Furie, Karen L., Miller, Rachel, Cook, Jennifer, D'Alessandro, David, Han, Frederick, Pinney, Sean, Walsh, Mary N., Greer, David, Ishida, Koto, Stapf, Christian, Hung, Judy, Zeng, Xin, Hung, David, Satitthummanid, Sudarat, Billelo, Michel, Davatzikos, Christos, Erus, Guray, Karpf, Lauren, Desiderio, Lisa, Browndyke, Jeffrey N., James, Michael L., Toulgoat-Dubois, Yanne, Brassard, Rachele, Virmanu, Renu, Romero, Maria E., Braumann, Ryan, Messé, Steven R., Mack, Michael J., Southerland, Andrew M., Moy, Claudia Scala, and Bowdish, Michael E.
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- 2024
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9. Trafficking dynamics of VEGFR1, VEGFR2, and NRP1 in human endothelial cells.
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Sarvenaz Sarabipour, Karina Kinghorn, Kaitlyn M. Quigley, Anita Kovacs-Kasa, Brian H. Annex, Victoria L. Bautch, and Feilim Mac Gabhann
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- 2024
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10. Experiment-based computational model predicts that IL-6 classic and trans-signaling exhibit similar potency in inducing downstream signaling in endothelial cells
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Min Song, Youli Wang, Brian H. Annex, and Aleksander S. Popel
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Biology (General) ,QH301-705.5 - Abstract
Abstract Inflammatory cytokine mediated responses are important in the development of many diseases that are associated with angiogenesis. Targeting angiogenesis as a prominent strategy has shown limited effects in many contexts such as cardiovascular diseases and cancer. One potential reason for the unsuccessful outcome is the mutual dependent role between inflammation and angiogenesis. Inflammation-based therapies primarily target inflammatory cytokines such as interleukin-6 (IL-6) in T cells, macrophages, cancer cells, and muscle cells, and there is a limited understanding of how these cytokines act on endothelial cells. Thus, we focus on one of the major inflammatory cytokines, IL-6, mediated intracellular signaling in endothelial cells by developing a detailed computational model. Our model quantitatively characterized the effects of IL-6 classic and trans-signaling in activating the signal transducer and activator of transcription 3 (STAT3), phosphatidylinositol 3-kinase/protein kinase B (PI3K/Akt), and mitogen-activated protein kinase (MAPK) signaling to phosphorylate STAT3, extracellular regulated kinase (ERK) and Akt, respectively. We applied the trained and validated experiment-based computational model to characterize the dynamics of phosphorylated STAT3 (pSTAT3), Akt (pAkt), and ERK (pERK) in response to IL-6 classic and/or trans-signaling. The model predicts that IL-6 classic and trans-signaling induced responses are IL-6 and soluble IL-6 receptor (sIL-6R) dose-dependent. Also, IL-6 classic and trans-signaling showed similar potency in inducing downstream signaling; however, trans-signaling induces stronger downstream responses and plays a dominant role in the overall effects from IL-6 due to the in vitro experimental setting of abundant sIL-6R. In addition, both IL-6 and sIL-6R levels regulate signaling strength. Moreover, our model identifies the influential species and kinetic parameters that specifically modulate the downstream inflammatory and/or angiogenic signals, pSTAT3, pAkt, and pERK responses. Overall, the model predicts the effects of IL-6 classic and/or trans-signaling stimulation quantitatively and provides a framework for analyzing and integrating experimental data. More broadly, this model can be utilized to identify potential targets that influence IL-6 mediated signaling in endothelial cells and to study their effects quantitatively in modulating STAT3, Akt, and ERK activation.
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- 2023
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11. Elevation Anomalies of the Volcanic Floor Unit and Their Relationships to the Multiple Lakes of Jezero Crater, Mars
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A. M. Annex and B. L. Ehlmann
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Jezero ,crater floor ,topography ,Geophysics. Cosmic physics ,QC801-809 - Abstract
Abstract We reassessed several orbital topographic data sets for the Perseverance rover landing site at Jezero Crater, Mars to better understand its floor units. Tens‐of‐meters deep topographic anomalies occur in the volcanic floor of Jezero crater and are not a result of impact cratering. Eight km‐scale steep escarpment‐bounded depressions may be locations of paleotopographic highs that were embayed by the volcanic floor lava flows, forming inverted topography from either contemporaneous upward inflation of embaying lavas or later deep scour due to differential erosion over 107−9 years. Five multi km‐scale shallow‐sloped depressions linked by channel‐like forms may record locations of buried paleolakes and channels that predate the volcanic floor units or a drained magma system. These results indicate Jezero experienced multiple closed‐basin or dry phases, allowing erosion of the crater floor and creation of topography, which provides new geologic context for the samples gathered by Perseverance.
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- 2024
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12. Endothelial cells signaling and patterning under hypoxia: a mechanistic integrative computational model including the Notch-Dll4 pathway
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Rebeca Hannah de Melo Oliveira, Brian H. Annex, and Aleksander S. Popel
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angiogenesis ,mathematical modeling ,systems biology ,hypoxia ,endothelial cells ,Physiology ,QP1-981 - Abstract
Introduction: Several signaling pathways are activated during hypoxia to promote angiogenesis, leading to endothelial cell patterning, interaction, and downstream signaling. Understanding the mechanistic signaling differences between endothelial cells under normoxia and hypoxia and their response to different stimuli can guide therapies to modulate angiogenesis. We present a novel mechanistic model of interacting endothelial cells, including the main pathways involved in angiogenesis.Methods: We calibrate and fit the model parameters based on well-established modeling techniques that include structural and practical parameter identifiability, uncertainty quantification, and global sensitivity.Results: Our results indicate that the main pathways involved in patterning tip and stalk endothelial cells under hypoxia differ, and the time under hypoxia interferes with how different stimuli affect patterning. Additionally, our simulations indicate that Notch signaling might regulate vascular permeability and establish different Nitric Oxide release patterns for tip/stalk cells. Following simulations with various stimuli, our model suggests that factors such as time under hypoxia and oxygen availability must be considered for EC pattern control.Discussion: This project provides insights into the signaling and patterning of endothelial cells under various oxygen levels and stimulation by VEGFA and is our first integrative approach toward achieving EC control as a method for improving angiogenesis. Overall, our model provides a computational framework that can be built on to test angiogenesis-related therapies by modulation of different pathways, such as the Notch pathway.
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- 2024
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13. Machine Learning for Generalizable Prediction of Flood Susceptibility
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Sidrane, Chelsea, Fitzpatrick, Dylan J, Annex, Andrew, O'Donoghue, Diane, Gal, Yarin, and Biliński, Piotr
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Computer Science - Machine Learning ,Statistics - Applications ,Statistics - Machine Learning - Abstract
Flooding is a destructive and dangerous hazard and climate change appears to be increasing the frequency of catastrophic flooding events around the world. Physics-based flood models are costly to calibrate and are rarely generalizable across different river basins, as model outputs are sensitive to site-specific parameters and human-regulated infrastructure. In contrast, statistical models implicitly account for such factors through the data on which they are trained. Such models trained primarily from remotely-sensed Earth observation data could reduce the need for extensive in-situ measurements. In this work, we develop generalizable, multi-basin models of river flooding susceptibility using geographically-distributed data from the USGS stream gauge network. Machine learning models are trained in a supervised framework to predict two measures of flood susceptibility from a mix of river basin attributes, impervious surface cover information derived from satellite imagery, and historical records of rainfall and stream height. We report prediction performance of multiple models using precision-recall curves, and compare with performance of naive baselines. This work on multi-basin flood prediction represents a step in the direction of making flood prediction accessible to all at-risk communities., Comment: Will be presented at hadri.ai 2019, a workshop at NeurIPS
- Published
- 2019
14. Cassini Composite Infrared Spectrometer (CIRS) Observations of Titan 2004--2017
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Nixon, Conor A., Ansty, Todd M., Lombardo, Nicholas A., Bjoraker, Gordon L., Achterberg, Richard K., Annex, Andrew M., Rice, Malena, Romani, Paul N., Jennings, Donald E., Samuelson, Robert E., Anderson, Carrie M., Coustenis, Athena, Bezard, Bruno, Vinatier, Sandrine, Lellouch, Emmanuel, Courtin, Regis, Teanby, Nicholas A., Cottini, Valeria, and Flasar, F. Michael
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Astrophysics - Earth and Planetary Astrophysics ,Astrophysics - Instrumentation and Methods for Astrophysics - Abstract
From 2004 to 2017, the Cassini spacecraft orbited Saturn, completing 127 close flybys of its largest moon, Titan. Cassini's Composite Infrared Spectrometer (CIRS), one of 12 instruments carried on board, profiled Titan in the thermal infrared (7-1000 microns) throughout the entire 13-year mission. CIRS observed on both targeted encounters (flybys) and more distant opportunities, collecting 8.4 million spectra from 837 individual Titan observations over 3633 hours. Observations of multiple types were made throughout the mission, building up a vast mosaic picture of Titan's atmospheric state across spatial and temporal domains. This paper provides a guide to these observations, describing each type and chronicling its occurrences and global-seasonal coverage. The purpose is to provide a resource for future users of the CIRS data set, as well as those seeking to put existing CIRS publications into the overall context of the mission, and to facilitate future inter-comparison of CIRS results with those of other Cassini instruments, and ground-based observations., Comment: 62 pages, 31 figures, 10 tables. CSV format table data included
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- 2019
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15. Peripheral arterial disease: A small and large vessel problem
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Bethel, Monique and Annex, Brian H.
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- 2023
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16. Going With the Flow: Sedimentary Evolution of the Jezero Western Fan, Mars
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S Gupta, K Stack Morgan, N Mangold, L R W Ives, S Gwizd, R M E Williams, N Randazzo, A J Williams, P Russell, B H N Horgan, K L Siebach, M M Tice, J Hurowitz, R Barnes, C Tate, J I Núñez, S Sholes, L C Kah, M E Minitti, G Dromart, J F Bell, III, J Maki, G Paar, A Annex, B P Weiss, O Beyssac, J Frydenvang, M Nachon, R Kronyak, V Sun, A J Jones, D L Shuster, J I Simon, M P Lamb, J P Grotzinger, S Le Mouélic, O Gasnault, R C Wiens, S Maurice, and K A Farley
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Lunar and Planetary Science and Exploration - Abstract
Sedimentary fans developed at the mouths of Martian valleys have been interpreted as the deposits of sustained surface water flow on early Mars building either fluvial fan systems or deltas into standing bodies of water. Whilst much insight has been gleaned from orbital observations, it is only possible to constrain the character, relative timing and persistence of ancient aqueous activity on Mars through detailed on-the-ground interrogation of sedimentary successions built during fan growth. A prominent sedimentary fan deposit at the western margin of Jezero crater – the Western fan – has been interpreted from orbital data/observations to be a river delta that prograded into an ancient lake basin during the Late Noachian-Early Hesperian epochs on Mars (~3.6-3.8 Ga). The Western fan deposit forms a point-sourced depositional system developed at the mouth of Neretva Vallis, a valley system that is incised across the crater rim and has an extensive extra-crater catchment draining over diverse ancient geological units in Nili Planum. The mechanism of crater rim breaching remains unconstrained. Between 2022 and 2023, the Mars 2020 Perseverance rover explored the Western fan, with the objective of characterizing its paleoenvironmental context and collecting a diverse suite of sedimentary rock samples for return to Earth via the Mars Sample Return mission. Perseverance has now completed her traverse across the Western fan having commenced in the distal downstream sectors exposed at the erosional front of the fan and then crossing across its upper exposed surface toward the fan apex region near the mouth of Neretva Vallis. This transect provides a unique window into a Martian sediment routing system at a time when climate conditions permitted the flow of surface water. In this contribution, we review the overall sedimentary architecture of the fan and develop a model for its evolution based on detailed mapping of lithofacies changes across the fan. A first-order synoptic overview is presented.
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- 2024
17. Past Variations of Water Level of Jezero Paleolake
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N Mangold, G Caravaca, S Gupta, R M E Williams, O Gasnault, S Le Mouélic, E Dehouck, G Dromart, A Annex, J Hurowitz, L R W Ives, L C Kah, N Randazzo, J I Simon, K Stack, M M Tice, J F Bell, III, A Cousin, S Maurice, and R C Wiens
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Lunar and Planetary Science and Exploration - Abstract
The western fan of Jezero crater displays features interpreted as fluvial and deltaic sedimentary rocks from orbital data. Images obtained using the SuperCam Remote Micro-Imager (RMI) and the Mastcam-Z camera provide in-situ observations of Jezero crater’s western fan in various locations along the Perseverance traverse. In the last two years, the rover analyzed the fan front from a distance using these imaging tools and at close range using its entire payload. Then, in 2023, the Perseverance rover explored the top of the western Jezero sedimentary fan. Here we show that fluvial topsets and deltaic foresets dominate sedimentary rocks. Determining the boundary between fluvial and prodelta deposits enables us to draw the evolution of the lake level through time.
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- 2024
18. Snakes on a Spaceship - An Overview of Python in Heliophysics
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Burrell, A. G., Halford, A., Klenzing, J., Stoneback, R. A., Morley, S. K., Annex, A. M., Laundal, K. M., Kellerman, A. C., Stansby, D., and Ma, J.
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Astrophysics - Instrumentation and Methods for Astrophysics ,Physics - Space Physics - Abstract
Computational analysis has become ubiquitous within the heliophysics community. However, community standards for peer-review of codes and analysis have lagged behind these developments. This absence has contributed to the reproducibility crisis, where inadequate analysis descriptions and loss of scientific data have made scientific studies difficult or impossible to replicate. The heliophysics community has responded to this challenge by expressing a desire for a more open, collaborative set of analysis tools. This article summarizes the current state of these efforts and presents an overview of many of the existing Python heliophysics tools. It also outlines the challenges facing community members who are working towards the goal of an open, collaborative, Python heliophysics toolkit and presents guidelines that can ease the transition from individualistic data analysis practices to an accountable, communalistic environment., Comment: Published in JGR
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- 2019
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19. Abstract 18998: Deletion of the Duffy Antigen Receptor for Chemokines Impairs Blood Flow Recovery in the Mouse Hindlimb Ischemia Model: Role of CCL11
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Aboud, Ghaith, Harb, Ragheb, Kim, David, Goo, Brandee, OGBI, Mourad, Veerapaneni, Praneet, Chouhaita, Ronnie, Coffey, Philip, Lee, Richard, Hou, Yali, Guha, Avirup, Shi, Hong, Ushio-Fukai, Masuko, Annex, Brian H, Kim, Ha Won, and Weintraub, Neal L
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- 2023
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20. Direct endothelial ENaC activation mitigates vasculopathy induced by SARS-CoV2 spike protein
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Maritza J. Romero, Qian Yue, Bhupesh Singla, Jürg Hamacher, Supriya Sridhar, Auriel S. Moseley, Chang Song, Mobarak A. Mraheil, Bernhard Fischer, Markus Zeitlinger, Trinad Chakraborty, David Fulton, Lin Gan, Brian H. Annex, Gabor Csanyi, Douglas C. Eaton, and Rudolf Lucas
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Epithelial sodium channel (ENaC) ,SARS-CoV2 spike protein ,receptor binding domain (RBD) ,human ACE-2 ,endothelial dysfunction ,NADPH oxidase 2 (NOX2) ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionAlthough both COVID-19 and non-COVID-19 ARDS can be accompanied by significantly increased levels of circulating cytokines, the former significantly differs from the latter by its higher vasculopathy, characterized by increased oxidative stress and coagulopathy in lung capillaries. This points towards the existence of SARS-CoV2-specific factors and mechanisms that can sensitize the endothelium towards becoming dysfunctional. Although the virus is rarely detected within endothelial cells or in the circulation, the S1 subunit of its spike protein, which contains the receptor binding domain (RBD) for human ACE2 (hACE2), can be detected in plasma from COVID-19 patients and its levels correlate with disease severity. It remains obscure how the SARS-CoV2 RBD exerts its deleterious actions in lung endothelium and whether there are mechanisms to mitigate this.MethodsIn this study, we use a combination of in vitro studies in RBD-treated human lung microvascular endothelial cells (HL-MVEC), including electrophysiology, barrier function, oxidative stress and human ACE2 (hACE2) surface protein expression measurements with in vivo studies in transgenic mice globally expressing human ACE2 and injected with RBD.ResultsWe show that SARS-CoV2 RBD impairs endothelial ENaC activity, reduces surface hACE2 expression and increases reactive oxygen species (ROS) and tissue factor (TF) generation in monolayers of HL-MVEC, as such promoting barrier dysfunction and coagulopathy. The TNF-derived TIP peptide (a.k.a. solnatide, AP301) -which directly activates ENaC upon binding to its a subunit- can override RBD-induced impairment of ENaC function and hACE2 expression, mitigates ROS and TF generation and restores barrier function in HL-MVEC monolayers. In correlation with the increased mortality observed in COVID-19 patients co-infected with S. pneumoniae, compared to subjects solely infected with SARS-CoV2, we observe that prior intraperitoneal RBD treatment in transgenic mice globally expressing hACE2 significantly increases fibrin deposition and capillary leak upon intratracheal instillation of S. pneumoniae and that this is mitigated by TIP peptide treatment.
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- 2023
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21. Contrast-Enhanced Ultrasound Reveals Partial Perfusion Recovery After Hindlimb Ischemia as Opposed to Full Recovery by Laser Doppler Perfusion Imaging
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Becker, Alyssa B., Chen, Lanlin, Ning, Bo, Hu, Song, Hossack, John A., Klibanov, Alexander L., Annex, Brian H., and French, Brent A.
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- 2022
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22. Pentose Pathway Activation Is Superior to Increased Glycolysis for Therapeutic Angiogenesis in Peripheral Arterial Disease
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Abdelrahman A. Zaied, Masuko Ushio‐Fukai, Tohru Fukai, Anita Kovacs‐Kasa, Suhib Alhusban, Varadarajan Sudhahar, Vijay C. Ganta, and Brian H. Annex
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endothelial metabolism ,glycolysis ,hypoxia dependent angiogenesis ,microRNA‐93 ,pentose phosphate pathway ,vascular permeability ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background In endothelial cells (ECs), glycolysis, regulated by PFKFB3 (6‐phosphofructo‐2‐kinase/fructose‐2,6‐biphosphatase, isoform‐3), is the major metabolic pathway for ATP generation. In preclinical peripheral artery disease models, VEGF165a (vascular endothelial growth factor165a) and microRNA‐93 both promote angiogenesis. Methods and Results Mice following hind‐limb ischemia (HLI) and ECs with, and without, hypoxia and serum starvation were examined with, and without, microRNA‐93 and VEGF165a. Post‐HLI perfusion recovery was monitored. EC metabolism was studied using seahorse assay, and the expression and activity of major metabolism genes were assessed. Reactive oxygen species levels and EC permeability were evaluated. C57Bl/6J mice generated a robust angiogenic response to HLI, with ECs from ischemic versus nonischemic muscle demonstrating no increase in glycolysis. Balb/CJ mice generated a poor angiogenic response post‐HLI; ischemic versus nonischemic ECs demonstrated significant increase in glycolysis. MicroRNA‐93‐treated Balb/CJ mice post‐HLI showed better perfusion recovery, with ischemic versus nonischemic ECs showing no increase in glycolysis. VEGF165a‐treated Balb/CJ mice post‐HLI showed no improvement in perfusion recovery with ischemic versus nonischemic ECs showing significant increase in glycolysis. ECs under hypoxia and serum starvation upregulated PFKFB3. In ECs under hypoxia and serum starvation, VEGF165a versus control significantly upregulated PFKFB3 and glycolysis, whereas miR‐93 versus control demonstrated no increase in PFKFB3 or glycolysis. MicroRNA‐93 versus VEGF165a upregulated glucose‐6‐phosphate dehydrogenase expression and activity, activating the pentose phosphate pathway. MicroRNA‐93 versus control increased reduced nicotinamide adenine dinucleotide phosphate and virtually eliminated the increase in reactive oxygen species. In ECs under hypoxia and serum starvation, VEGF165a significantly increased and miR‐93 decreased EC permeability. Conclusions In peripheral artery disease, activation of the pentose phosphate pathway to promote angiogenesis may offer potential therapeutic advantages.
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- 2023
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23. Dynamic Multiscale Regulation of Perfusion Recovery in Experimental Peripheral Arterial Disease: A Mechanistic Computational Model
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Zhao, Chen, Heuslein, Joshua L., Zhang, Yu, Annex, Brian H., and Popel, Aleksander S.
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- 2022
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24. Angiogenesis: Perspectives from Therapeutic Angiogenesis
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Bethel, Monique, Arora, Vishal, Annex, Brian H., Navarro, Tulio Pinho, editor, Minchillo Lopes, Lara Lellis Navarro, editor, and Dardik, Alan, editor
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- 2021
- Full Text
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25. Perivascular adipose tissue promotes vascular dysfunction in murine lupus
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Hong Shi, Brandee Goo, David Kim, Taylor C. Kress, Mourad Ogbi, James Mintz, Hanping Wu, Eric J. Belin de Chantemèle, David Stepp, Xiaochun Long, Avirup Guha, Richard Lee, Laura Carbone, Brian H. Annex, David Y. Hui, Ha Won Kim, and Neal L. Weintraub
- Subjects
systemic lupus erythematosus ,cardiovascular disease ,perivascular adipose tissue ,inflammation ,vasorelaxation ,Immunologic diseases. Allergy ,RC581-607 - Abstract
IntroductionPatients with systemic lupus erythematosus (SLE) are at elevated risk for Q10 cardiovascular disease (CVD) due to accelerated atherosclerosis. Compared to heathy control subjects, lupus patients have higher volumes and densities of thoracic aortic perivascular adipose tissue (PVAT), which independently associates with vascular calcification, a marker of subclinical atherosclerosis. However, the biological and functional role of PVAT in SLE has not been directly investigated.MethodsUsing mouse models of lupus, we studied the phenotype and function of PVAT, and the mechanisms linking PVAT and vascular dysfunction in lupus disease. Results and discussionLupus mice were hypermetabolic and exhibited partial lipodystrophy, with sparing of thoracic aortic PVAT. Using wire myography, we found that mice with active lupus exhibited impaired endothelium-dependent relaxation of thoracic aorta, which was further exacerbated in the presence of thoracic aortic PVAT. Interestingly, PVAT from lupus mice exhibited phenotypic switching, as evidenced by “whitening” and hypertrophy of perivascular adipocytes along with immune cell infiltration, in association with adventitial hyperplasia. In addition, expression of UCP1, a brown/beige adipose marker, was dramatically decreased, while CD45-positive leukocyte infiltration was increased, in PVAT from lupus mice. Furthermore, PVAT from lupus mice exhibited a marked decrease in adipogenic gene expression, concomitant with increased pro-inflammatory adipocytokine and leukocyte marker expression. Taken together, these results suggest that dysfunctional, inflamed PVAT may contribute to vascular disease in lupus.
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- 2023
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26. Three‐Dimensional Data Preparation and Immersive Mission‐Spanning Visualization and Analysis of Mars 2020 Mastcam‐Z Stereo Image Sequences
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Gerhard Paar, Thomas Ortner, Christian Tate, Robert G. Deen, Parker Abercrombie, Marsette Vona, Jon Proton, Andreas Bechtold, Fred Calef, Robert Barnes, Christian Koeberl, Ken Herkenhoff, Elisabeth M. Hausrath, Christoph Traxler, Piluca Caballo, Andrew M. Annex, Sanjeev Gupta, James F. Bell III, and Justin Maki
- Subjects
Mars exploration ,visualization ,Mars 2020 ,Mastcam‐Z ,Astronomy ,QB1-991 ,Geology ,QE1-996.5 - Abstract
Abstract The Mars 2020 Mastcam‐Z stereo camera investigation enables the generation of three dimension (3D) data products needed to visualize and analyze rocks, outcrops, and other geological and aeolian features. The Planetary Robotics Vision Processing framework “PRoViP” as well as the Instrument Data System on a tactical—sol‐by‐sol—timeframe generate 3D vision products, such as panoramas, distance maps, and textured meshes. Structure‐from‐motion used by the Advanced Science Targeting Toolkit for Robotic Operations (ASTTRO) “Landform” tool and long baseline stereo pipelines add to the 3D vision products' suite on various scales. Data fusion with textured meshes from satellite imagery and 3D data analysis and interpretation of the resulting large 3D data sets is realized by visualization assets like the Planetary Robotics Vision 3D Viewer PRo3D, the 3D Geographical Information System GIS CAMP (Campaign Analysis Mapping and Planning tool), the ASTTRO 3D data presentation and targeting tool, and the Mastcam‐Z planning tool Viewpoint. The pipelines' workflows and the user‐oriented features of the visualization assets, shared across the Mars 2020 mission, are reported. The individual role and interplay, complements and synergies of the individual frameworks are explained. Emphasis is laid on publicly available 3D vision data products and tools. A representative set of scientific use cases from planetary geology, aeolian activity, soil analysis and impact science illustrates the scientific workflow, and public data deployment modes are briefly outlined, demonstrating that 3D vision processing and visualization is an essential mission‐wide asset to solve important planetary science questions such as prevailing wind direction, soil composition, or geologic origin.
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- 2023
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27. The Complex Exhumation History of Jezero Crater Floor Unit and Its Implication for Mars Sample Return
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C Quantin-Nataf, S Alwmark, F J Calef, J Lasue, K Kinch, K M Stack, V Sun, N R Williams, E Dehouck, L Mandon, N Mangold, O Beyssac, E Clave, S H G Walter, J I Simon, A M Annex, B Horgan, James W Rice Jr, D Shuster, B Cohen, L Kah, Steven Sholes, and B P Weiss
- Subjects
Geosciences (General) ,Lunar and Planetary Science and Exploration - Abstract
During the first year of NASA's Mars 2020 mission, Perseverance rover has investigated the dark crater floor unit of Jezero crater and four samples of this unit have been collected. The focus of this paper is to assess the potential of these samples to calibrate the crater-based Martian chronology. We first review the previous estimation of crater-based model age of this unit. Then, we investigate the impact crater density distribution across the floor unit. It reveals that the crater density is heterogeneous from areas which have been exposed to the bombardment during the last 3 Ga to areas very recently exposed to bombardment. It suggests a complex history of exposure to impact cratering. We also display evidence of several remnants of deposits on the top of the dark floor unit across Jezero below which the dark floor unit may have been buried. We propose the following scenario of burying/exhumation: the dark floor unit would have been initially buried below a unit that was a few tens of meters thick. This unit then gradually eroded away due to Aeolian processes from the northeast to the west, resulting in uneven exposure to impact bombardment over 3 Ga. A cratering model reproducing this scenario confirms the feasibility of this hypothesis. Due to the complexity of its exposure history, the Jezero dark crater floor unit will require additional detailed analysis to understand how the Mars 2020 mission samples of the crater floor can be used to inform the Martian cratering chronology.
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- 2023
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28. Machine Learning Approach to Predict In‐Hospital Mortality in Patients Admitted for Peripheral Artery Disease in the United States
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Donglan Zhang, Yike Li, Corey Andrew Kalbaugh, Lu Shi, Jasmin Divers, Shahidul Islam, and Brian H. Annex
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big data ,diabetes ,hospital mortality ,machine learning ,peripheral artery disease ,precision medicine ,Diseases of the circulatory (Cardiovascular) system ,RC666-701 - Abstract
Background Peripheral artery disease (PAD) affects >10 million people in the United States. PAD is associated with poor outcomes, including premature death. Machine learning (ML) has been increasingly used on big data to predict clinical outcomes. This study aims to develop ML models to predict in‐hospital mortality in patients hospitalized for PAD based on a national database. Methods and Results Inpatient hospitalization data were obtained from the 2016 to 2019 National Inpatient Sample. A total of 150 921 inpatients were identified with a primary diagnosis of PAD and PAD‐related procedures using codes of the International Classification of Diseases, Tenth Revision, Clinical Modification (ICD‐10‐CM) and International Classification of Diseases, Tenth Revision, Procedure Coding System (ICD‐10‐PCS). Four ML models, including logistic regression, random forest, light gradient boosting, and extreme gradient boosting models, were trained to predict the risk of in‐hospital death based on a selection of variables, including patient characteristics, comorbidities, procedures, and hospital‐related factors. In‐hospital mortality occurred in 1.8% of patients. The performance of the 4 models was comparable, with the area under the receiver operating characteristic curve ranging from 0.83 to 0.85, sensitivity of 77% to 82%, and specificity of 72% to 75%. These results suggest adequate predictability for clinical decision‐making. In all 4 models, the total number of diagnoses and procedures, age, endovascular revascularization procedure, congestive heart failure, diabetes, and diabetes with complications were critical predictors of in‐hospital mortality. Conclusions This study demonstrates the feasibility of ML in predicting in‐hospital mortality in patients with a primary PAD diagnosis. Findings highlight the potential of ML models in identifying high‐risk patients for poor outcomes and guiding personalized intervention.
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- 2022
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29. A systems biology model of junctional localization and downstream signaling of the Ang–Tie signaling pathway
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Yu Zhang, Christopher D. Kontos, Brian H. Annex, and Aleksander S. Popel
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Biology (General) ,QH301-705.5 - Abstract
Abstract The Ang–Tie signaling pathway is an important vascular signaling pathway regulating vascular growth and stability. Dysregulation in the pathway is associated with vascular dysfunction and numerous diseases that involve abnormal vascular permeability and endothelial cell inflammation. The understanding of the molecular mechanisms of the Ang–Tie pathway has been limited due to the complex reaction network formed by the ligands, receptors, and molecular regulatory mechanisms. In this study, we developed a mechanistic computational model of the Ang–Tie signaling pathway validated against experimental data. The model captures and reproduces the experimentally observed junctional localization and downstream signaling of the Ang–Tie signaling axis, as well as the time-dependent role of receptor Tie1. The model predicts that Tie1 modulates Tie2’s response to the context-dependent agonist Ang2 by junctional interactions. Furthermore, modulation of Tie1’s junctional localization, inhibition of Tie2 extracellular domain cleavage, and inhibition of VE-PTP are identified as potential molecular strategies for potentiating Ang2’s agonistic activity and rescuing Tie2 signaling in inflammatory endothelial cells.
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- 2021
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30. A data-driven computational model enables integrative and mechanistic characterization of dynamic macrophage polarization
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Zhao, Chen, Medeiros, Thalyta X., Sové, Richard J., Annex, Brian H., and Popel, Aleksander S.
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- 2021
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31. Sustainable Development Goals
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Wamalwa, Annex Nafula, primary
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- 2022
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32. Imaging Needs for Development of Novel Therapeutics in PAD
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Kaso, Elona Rrapo, Annex, Brian H., and Kramer, Christopher M., editor
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- 2020
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33. Glucosamine-Mediated Hexosamine Biosynthesis Pathway Activation Uses ATF4 to Promote "Exercise-Like" Angiogenesis and Perfusion Recovery in PAD.
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Alhusban, Suhib, Nofal, Mohamed, Kovacs-Kasa, Anita, Kress, Taylor C., Koseoglu, M. Murat, Zaied, Abdelrahman A., Belin de Chantemele, Eric J., and Annex, Brian H.
- Published
- 2024
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34. Constraining the Duration and Ages of Stratigraphic Unconformities on Mars Using Exhumed Craters.
- Author
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Annex, A. M. and Lewis, K. W.
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GALE Crater (Mars) ,MARTIAN craters ,DISTRIBUTION (Probability theory) ,PLANETARY surfaces ,ORDER statistics ,IMPACT craters ,LUNAR craters - Abstract
Crater counting is a widely applied methodology for dating large areas of planetary surfaces, but is difficult to apply the method to constrain the durations of stratigraphic unconformities. Unconformities with exhumed craters are thought to indicate long hiatuses that can only be indirectly dated through stratigraphic relationships with other surfaces with uniform exposure ages. On Mars, sedimentary deposits with prominent unconformities with exhumed craters are found in layered deposits in the Arabia Terra region as well as Gale crater within Mount Sharp. In this work, we present a Linear Crater Counting methodology and apply it to constrain these unconformities observed in Arabia Terra and in Mount Sharp. The method applies a linear sampling domain correction to conventional two‐dimensional crater size frequency distributions and Bayesian Poisson process statistics in order to constrain the likely durations of these unconformities. We found that unconformities in Arabia Terra were on the order of 0.1–1 Gyr in length and that the unconformity preserved at Mount Sharp is at least 0.2 Gyr in length given estimates of the ages of the host craters. Hiatuses of these lengths constrain the age of the overlying deposits to be Late Hesperian or Amazonian in age. Two utility plots are also provided, along with the derivation, for researchers to apply this method to dating arbitrary geologic contacts on Mars and to adapt it to other bodies. Plain Language Summary: The crater counting method is a widely used method to date planetary surfaces. Crater counting works by comparing the number of craters in an area to the expected number of craters that should be observed for that area using a model of how many craters form and their expected size through time. On Mars, geologic contacts of sedimentary deposits with exhumed craters are seen in Arabia Terra and in Gale crater in Mount Sharp. Craters exhumed in these geologic contacts are thought to indicate long gaps in time between the formation dates of the upper and lower rock layers. However, dating these time gaps directly is not possible with conventional crater counting. To solve this problem, we developed a new linear crater counting method which describes the likely number of craters for a given age that could be found along a line on the surface of Mars. We apply this method to the geologic contacts seen in Arabia Terra and in Gale crater, and find that the time gaps are hundreds of millions of years in length to over a billion years in length. Our results confirm predictions that these deposits are geologically younger than previously thought. Key Points: We describe a novel linear crater counting method to date stratigraphic unconformities using partially exhumed craters along unit boundariesWe found that layered deposits in Arabia Terra and the Upper mound unit in Gale crater could be Amazonian in Age from applying our methodOur methodology can be applied broadly to better understand chronostratigraphy across the solar system [ABSTRACT FROM AUTHOR]
- Published
- 2024
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35. Acute psychological stress, autonomic function, and arterial stiffness among women
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Logan, Jeongok G., Teachman, Bethany A., Liu, Xiaoyue, Farber, Charles R., Liu, Zhenqi, and Annex, Brian H.
- Published
- 2020
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36. Abstract 15292: Il21R-AS1 Long Non-Coding RNA as Potential Regulator in Therapeutic Angiogenesis in Peripheral Arterial Disease
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Kovacs-Kasa, Anita, Koseoglu, Murat M, and Annex, Brian H
- Published
- 2022
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37. Abstract 14080: LINC02397 in Skeletal Muscle: A Marker of, and Therapeutic Target for, Chronic Limb Threatening Ischemia
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YOSHIDA, Shohei, McClung, Joseph, Koseoglu, Mehmet, Brewer, Lauren, Heuslein, Joshua, and Annex, Brian H
- Published
- 2022
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38. Abstract 14054: Monocyte Vascular Endothelial Growth Factor Receptor-1 Signaling in Peripheral Artery Disease
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Zaied, Abdelrahman A, Brewer, Lauren, Rezaee, Sholeh, Threlkeld, Edie, Leanhart, Silvia, Hamilton, Adeleigh, and Annex, Brian H
- Published
- 2022
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39. Prospective Evaluation of Response to Treatment, Survival Functions, Recurrence Pattern and Toxicity Profile in Indian Patients with Oligo-Brain Metastasis Treated with Only SRS
- Author
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Dutta, Debnarayan, Reddy, Sruti, Kamath, Ram, Sreenija, Yarlagadda, Nair, Haridas, Sashidharan, Ajay, Nair, R. Remesan, Pushpuja, K., Kannan, Rajesh, Edappattu, Annex, Haridas, Nikhil, Jose, Wesley, and Keechilat, Pavithran
- Subjects
Testing ,Prevention ,Complications and side effects ,Risk factors ,Cancer recurrence -- Risk factors -- Prevention ,Drug toxicity -- Testing ,Radiosurgery -- Complications and side effects ,Cancer metastasis -- Risk factors -- Prevention ,Metastasis -- Risk factors -- Prevention ,Drugs -- Health aspects ,Cancer -- Relapse - Published
- 2023
40. Caring for the Whole Person
- Author
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Patient-Centered Outcomes Research Institute, Oregon Health and Science University, Cascadia Addiction Research and Education, LLC, Umpqua Community Health Center, Mosaic Medical, North Portland Clinic, Providence Medical Group, Rockwood Clinic, The Bend Clinic, Yamhill CCO, The Annex, Cascadia Gardiner Clinic, Umpqua Expanded Care Clinic, and Bridges Clinic
- Published
- 2017
41. Sedimentology and Stratigraphy of the Shenandoah Formation, Western Fan, Jezero Crater, Mars
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Stack, K. M., Ives, L. R. W., Gupta, S., Lamb, M. P., Tebolt, M., Caravaca, G., Grotzinger, J. P., Russell, P., Shuster, D. L., Williams, A. J., Amundsen, H., Alwmark, S., Annex, A. M., Barnes, R., Bell, J., Beyssac, O., Bosak, T., Crumpler, L. S., Dehouck, E., Gwizd, S. J., Hickman-Lewis, K., Horgan, B. H. N., Hurowitz, J., Kalucha, H., Kanine, O., Lesh, C., Maki, J., Mangold, N., Randazzo, N., Seeger, C., Williams, R. M. E., Brown, A., Cardarelli, E., Dypvik, H., Flannery, D., Frydenvang, J., Hamran, S.-E., Núñez, J. I., Paige, D., Simon, J. I., Tice, M., Tate, C., Wiens, R. C., Stack, K. M., Ives, L. R. W., Gupta, S., Lamb, M. P., Tebolt, M., Caravaca, G., Grotzinger, J. P., Russell, P., Shuster, D. L., Williams, A. J., Amundsen, H., Alwmark, S., Annex, A. M., Barnes, R., Bell, J., Beyssac, O., Bosak, T., Crumpler, L. S., Dehouck, E., Gwizd, S. J., Hickman-Lewis, K., Horgan, B. H. N., Hurowitz, J., Kalucha, H., Kanine, O., Lesh, C., Maki, J., Mangold, N., Randazzo, N., Seeger, C., Williams, R. M. E., Brown, A., Cardarelli, E., Dypvik, H., Flannery, D., Frydenvang, J., Hamran, S.-E., Núñez, J. I., Paige, D., Simon, J. I., Tice, M., Tate, C., and Wiens, R. C.
- Abstract
Sedimentary fans are key targets of exploration on Mars because they record the history of surface aqueous activity and habitability. The sedimentary fan extending from the Neretva Vallis breach of Jezero crater's western rim is one of the Mars 2020 Perseverance rover's main exploration targets. Perseverance spent ∼250 sols exploring and collecting seven rock cores from the lower ∼25 m of sedimentary rock exposed within the fan's eastern scarp, a sequence informally named the “Shenandoah” formation. This study describes the sedimentology and stratigraphy of the Shenandoah formation at two areas, “Cape Nukshak” and “Hawksbill Gap,” including a characterization, interpretation, and depositional framework for the facies that comprise it. The five main facies of the Shenandoah formation include: laminated mudstone, laminated sandstone, low-angle cross stratified sandstone, thin-bedded granule sandstone, and thick-bedded granule-pebble sandstone and conglomerate. These facies are organized into three facies associations (FA): FA1, comprised of laminated and soft sediment-deformed sandstone interbedded with broad, unconfined coarser-grained granule and pebbly sandstone intervals; FA2, comprised predominantly of laterally extensive, soft-sediment deformed laminated, sulfate-bearing mudstone with lenses of low-angle cross-stratified and scoured sandstone; and FA3, comprised of dipping planar, thin-bedded sand-gravel couplets. The depositional model favored for the Shenandoah formation involves the transition from a sand-dominated distal alluvial fan setting (FA1) to a stable, widespread saline lake (FA2), followed by the progradation of a river delta system (FA3) into the lake basin. This sequence records the initiation of a relatively long-lived, habitable lacustrine and deltaic environment within Jezero crater.
- Published
- 2024
42. Effect of the Relativistic Electron Beam on Propagating Whistler-Mode Wave for Ring Distribution in the Saturn Magnetosphere
- Author
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E.H. Annex, Rama S. Pandey, and Mukesh Kumar
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Magnetospheric environment of Saturn ,rate of growth ,wave-particle interactions ,Whistler Mode Waves ,Physics ,QC1-999 - Abstract
Cassini and many investigators reported whistler chorus near Saturn equatorial plane moving outwards. Whistler can propagate when going to high latitude and can alter its characteristics while interacting resonantly with available energetic electrons. Here investigating wave for a relativistic beam of the electron. It is observed and reported by Cassini Magnetospheric Imaging Instrument (MIMI) that inward radial injection of highly energetic particles is most dominant in Saturn intrinsic magnetosphere. Within this paradigm, an empirical energy dispersion relation for propagated whistler-mode oscillations in quasi Saturn magnetospheric plasma from such a non-monotonous ringed distribution function has been established. The kinetic approach and method of characteristics methodologies were used in the computations, which have been shown to be the best for building perturbed plasma states. The perturbed distribution function was estimated using the unperturbed particle routes. The ring distribution function was used to construct an unexpected growth rate expression for relativistic plasma in the inner magnetosphere. The results from the Saturn magnetosphere have been calculated and interpreted using a range of parameters. Temperature heterogeneity was shown to be a significant source of free energy that aided the propagation of a whistler-mode wave. By raising the peak value, the bulk injection of energetic hot electron injection impacts the growth rate. Growth was also demonstrated to be accelerated when the propagation angle increased. The research contributes to a better understanding of the relationship between wave and particle emissions and VLF emissions on a large scale.
- Published
- 2022
- Full Text
- View/download PDF
43. Elevated Cytokine Levels in Plasma of Patients with SARS-CoV-2 Do Not Contribute to Pulmonary Microvascular Endothelial Permeability
- Author
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Anita Kovacs-Kasa, Abdelrahman A. Zaied, Silvia Leanhart, Murat Koseoglu, Supriya Sridhar, Rudolf Lucas, David J. Fulton, Jose A. Vazquez, and Brian H. Annex
- Subjects
SARS-CoV-2 ,barrier dysfunction ,endothelial permeability ,plasma ,cytokine ,complements factors ,Microbiology ,QR1-502 - Abstract
ABSTRACT The vascular endothelial injury occurs in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) infections, but the mechanisms are poorly understood. We sought to determine the frequency and type of cytokine elevations and their relationship to endothelial injury induced by plasma from patients with SARS-CoV-2 versus controls. Plasma from eight consecutively enrolled patients hospitalized with acute SARS-CoV-2 infection was compared to controls. Endothelial cell (EC) barrier integrity was evaluated using ECIS (electric cell-substrate impedance sensing) on human lung microvascular EC. Plasma from all SARS-CoV-2 but none from controls decreased transendothelial resistance to a greater degree than that produced by tumor necrosis factor-alpha (TNF-α), the positive control for the assay. Thrombin, angiopoietin 2 (Ang2), and vascular endothelial growth factor (VEGF), complement factor C3a and C5a, and spike protein increased endothelial permeability, but to a lesser extent and a shorter duration when compared to SARS-CoV-2 plasma. Analysis of Ang2, VEGF, and 15 cytokines measured in plasma revealed striking patient-to-patient variability within the SARS-CoV-2 patients. Pretreatment with thrombin inhibitors, single, or combinations of neutralizing antibodies against cytokines, Ca3 and C5a receptor antagonists, or with ACE2 antibody failed to lessen the SARS-CoV-2 plasma-induced EC permeability. The EC barrier destructive effects of plasma from patients with SARS-CoV-2 were susceptible to heat inactivation. Plasma from patients hospitalized with acute SARS-CoV-2 infection uniformly disrupts lung microvascular integrity. No predicted single, or set of, cytokine(s) accounted for the enhanced vascular permeability, although the factor(s) were heat-labile. A still unidentified but potent circulating factor(s) appears to cause the EC disruption in SARS-CoV-2 infected patients. IMPORTANCE Lung vascular endothelial injury in SARS-CoV-2 patients is one of the most important causes of morbidity and mortality and has been linked to more severe complications including acute respiratory distress syndrome (ARDS) and subsequent death due to multiorgan failure. We have demonstrated that in eight consecutive patients with SARS-CoV-2, who were not selected for evidence of endothelial injury, the diluted plasma-induced intense lung microvascular damage, in vitro. Known endothelial barrier-disruptive agents and proposed mediators of increased endothelial permeability in SARS-CoV-2, induced changes in permeability that were smaller in magnitude and shorter in duration than plasma from patients with SARS-CoV-2. The effect on endothelial cell permeability of plasma from patients with SARS-CoV-2 was heat-labile. The main plasma factor that causes the increased endothelial permeability remains to be identified. Our study provides a possible approach for future studies to understand the underlying mechanisms leading to vascular injury in SARS-CoV-2 infections.
- Published
- 2022
- Full Text
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44. Incidence and predictors of hypertension in adults with HIV-initiating antiretroviral therapy in south-western Uganda
- Author
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Okello, Samson, Kanyesigye, Michael, Muyindike, Winnie R, Annex, Brian Herb, Hunt, Peter W, Haneuse, Sebastien, and Siedner, Mark Jacob
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Hypertension ,Infectious Diseases ,HIV/AIDS ,Prevention ,Cardiovascular ,Clinical Research ,Evaluation of treatments and therapeutic interventions ,6.1 Pharmaceuticals ,Infection ,Good Health and Well Being ,Adult ,Anti-Retroviral Agents ,Female ,HIV Infections ,Humans ,Incidence ,Male ,Risk Factors ,Uganda ,aging ,antiretroviral therapy ,HIV ,AIDS ,hypertension ,noncommunicable disease ,sub-Saharan Africa ,Cardiorespiratory Medicine and Haematology ,Medical Physiology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences - Abstract
ObjectiveThe successful scale-up of antiretroviral therapy (ART) in sub-Saharan Africa has led to increasing life expectancy, and thus increased risk of hypertension. We aimed to describe the incidence and predictors of hypertension in HIV patients receiving ART at a publicly funded clinic in rural Uganda.MethodsWe abstracted data from medical records of adult patients who initiated ART at an HIV clinic in south-western Uganda during 2010-2012. We defined hypertension as at least two consecutive clinical visits, with a SBP at least 140 mmHg and/or SBP of at least 90 mmHg, or prescription for an antihypertensive medication. We calculated the incidence of hypertension and fit multivariable Cox proportional-hazards models to identify predictors of hypertension.ResultsA total of 3389 patients initiated ART without a prior diagnosis of hypertension during the observation period. Over 3990 person-years of follow-up, 445 patients developed hypertension, for a crude incidence of 111.5/1000 (95% confidence interval 101.9-121.7) person-years. Rates were highest among men aged at least 40 years (158.8 per/1000 person-years) and lowest in women aged 30-39 years (80/1000 person-years). Lower CD4 cell count at ART initiation, as well as traditional risk factors including male sex, increasing age, and obesity, were independently associated with hypertension.ConclusionWe observed a high incidence of hypertension in HIV-infected persons on ART in rural Uganda, and increased risk with lower nadir CD4 cell counts. Our findings call for increased attention to screening of and treatment for hypertension, along with continued prioritization of early ART initiation.
- Published
- 2015
45. State-of-the-Art Methods for Evaluation of Angiogenesis and Tissue Vascularization
- Author
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Simons, Michael, Alitalo, Kari, Annex, Brian H, Augustin, Hellmut G, Beam, Craig, Berk, Bradford C, Byzova, Tatiana, Carmeliet, Peter, Chilian, William, Cooke, John P, Davis, George E, Eichmann, Anne, Iruela-Arispe, M Luisa, Keshet, Eli, Sinusas, Albert J, Ruhrberg, Christiana, Woo, Y Joseph, and Dimmeler, Stefanie
- Subjects
Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Clinical Sciences ,American Heart Association ,Animals ,Blood Vessels ,Diagnostic Imaging ,Disease Models ,Animal ,Endothelial Cells ,Female ,Hindlimb ,Humans ,Models ,Cardiovascular ,Neovascularization ,Physiologic ,Placenta ,Pregnancy ,Reproducibility of Results ,Rhombencephalon ,Sensitivity and Specificity ,Societies ,Medical ,United States ,Vascular Diseases ,American Heart Association Council on Basic Cardiovascular Sciences and Council on Cardiovascular Surgery and Anesthesia ,AHA Scientific Statements ,angiogenesis ,arteriogenesis ,assays ,endothelial ,imaging ,models ,Cardiorespiratory Medicine and Haematology ,Cardiovascular System & Hematology ,Cardiovascular medicine and haematology ,Clinical sciences - Published
- 2015
46. Loss of Id3 (Inhibitor of Differentiation 3) Increases the Number of IgM-Producing B-1b Cells in Ischemic Skeletal Muscle Impairing Blood Flow Recovery During Hindlimb Ischemia
- Author
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Osinski, Victoria, Srikakulapu, Prasad, Min Haider, Young, Marshall, Melissa A., Ganta, Vijay C., Annex, Brian H., and McNamara, Coleen A.
- Published
- 2021
- Full Text
- View/download PDF
47. AGGF1 Shows the α5β1 Integrin to Be Another Akt-or in a Common Angiogenesis Scene
- Author
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Mac Gabhann, Feilim and Annex, Brian H.
- Published
- 2021
- Full Text
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48. Angiopoietin-Tie Signaling Pathway in Endothelial Cells: A Computational Model
- Author
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Zhang, Yu, Kontos, Christopher D., Annex, Brian H., and Popel, Aleksander S.
- Published
- 2019
- Full Text
- View/download PDF
49. Limb Perfusion During Exercise Assessed by Contrast Ultrasound Varies According to Symptom Severity in Patients with Peripheral Artery Disease
- Author
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Davidson, Brian P., Hodovan, James, Mason, O'Neil R., Moccetti, Federico, Gupta, Avi, Muller, Matthew, Belcik, J. Todd, Annex, Brian H., and Lindner, Jonathan R.
- Published
- 2019
- Full Text
- View/download PDF
50. Loss of Id3 (Inhibitor of Differentiation 3) Increases the Number of IgM-Producing B-1b Cells in Ischemic Skeletal Muscle Impairing Blood Flow Recovery During Hindlimb Ischemia
- Author
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Osinski, Victoria, Srikakulapu, Prasad, Haider, Young Min, Marshall, Melissa A., Ganta, Vijay C., Annex, Brian H., and McNamara, Coleen A.
- Published
- 2022
- Full Text
- View/download PDF
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