Search

Detailed knowledge of dietary preferences in wild species are important both for understanding evolutionary processes as well as for their conservation. By means of DNA metabarcoding analysis of faecal samples, we investigated the diet of Alpine ibex (Capra ibex), a mountain ungulate characterised by strong sexual dimorphism and segregation, and analysed differences between male and female diet. Despite a low level of selectivity, we found differences in the diet of males and females that consumed different plant in different quantities. Differences were maintained during both spring and summer. Males tended to feed more on plants richer in fibres (i.e., grasses and sedges) and showed stronger seasonal differences while females consumed more digestible plant families (i.e., forbs). Differences in diet between male and female Alpine ibex are compatible with the strong sexual dimorphism and segregation typical of the species and with female reproductive constraints. These results also show that conservation actions have to take into account different ecological needs of males and females in species characterized by sexual dimorphism and segregation. [ABSTRACT FROM AUTHOR]

Background: Network theory is largely applied in real-world systems to assess landscape connectivity using empirical or theoretical networks. Empirical networks are usually built from discontinuous individual movement trajectories without knowing the effect of relocation frequency on the assessment of landscape connectivity while theoretical networks generally rely on simple movement rules. We investigated the combined effects of relocation sampling frequency and landscape fragmentation on the assessment of landscape connectivity using simulated trajectories and empirical high-resolution (1 Hz) trajectories of Alpine ibex (Capra ibex). We also quantified the capacity of commonly used theoretical networks to accurately predict landscape connectivity from multiple movement processes. Methods: We simulated forager trajectories from continuous correlated biased random walks in simulated landscapes with three levels of landscape fragmentation. High-resolution ibex trajectories were reconstructed using GPS-enabled multi-sensor biologging data and the dead-reckoning technique. For both simulated and empirical trajectories, we generated spatial networks from regularly resampled trajectories and assessed changes in their topology and information loss depending on the resampling frequency and landscape fragmentation. We finally built commonly used theoretical networks in the same landscapes and compared their predictions to actual connectivity. Results: We demonstrated that an accurate assessment of landscape connectivity can be severely hampered (e.g., up to 66% of undetected visited patches and 29% of spurious links) when the relocation frequency is too coarse compared to the temporal dynamics of animal movement. However, the level of landscape fragmentation and underlying movement processes can both mitigate the effect of relocation sampling frequency. We also showed that network topologies emerging from different movement behaviours and a wide range of landscape fragmentation were complex, and that commonly used theoretical networks accurately predicted only 30–50% of landscape connectivity in such environments. Conclusions: Very high-resolution trajectories were generally necessary to accurately identify complex network topologies and avoid the generation of spurious information on landscape connectivity. New technologies providing such high-resolution datasets over long periods should thus grow in the movement ecology sphere. In addition, commonly used theoretical models should be applied with caution to the study of landscape connectivity in real-world systems as they did not perform well as predictive tools. [ABSTRACT FROM AUTHOR]

Abstract Background Network theory is largely applied in real-world systems to assess landscape connectivity using empirical or theoretical networks. Empirical networks are usually built from discontinuous individual movement trajectories without knowing the effect of relocation frequency on the assessment of landscape connectivity while theoretical networks generally rely on simple movement rules. We investigated the combined effects of relocation sampling frequency and landscape fragmentation on the assessment of landscape connectivity using simulated trajectories and empirical high-resolution (1 Hz) trajectories of Alpine ibex (Capra ibex). We also quantified the capacity of commonly used theoretical networks to accurately predict landscape connectivity from multiple movement processes. Methods We simulated forager trajectories from continuous correlated biased random walks in simulated landscapes with three levels of landscape fragmentation. High-resolution ibex trajectories were reconstructed using GPS-enabled multi-sensor biologging data and the dead-reckoning technique. For both simulated and empirical trajectories, we generated spatial networks from regularly resampled trajectories and assessed changes in their topology and information loss depending on the resampling frequency and landscape fragmentation. We finally built commonly used theoretical networks in the same landscapes and compared their predictions to actual connectivity. Results We demonstrated that an accurate assessment of landscape connectivity can be severely hampered (e.g., up to 66% of undetected visited patches and 29% of spurious links) when the relocation frequency is too coarse compared to the temporal dynamics of animal movement. However, the level of landscape fragmentation and underlying movement processes can both mitigate the effect of relocation sampling frequency. We also showed that network topologies emerging from different movement behaviours and a wide range of landscape fragmentation were complex, and that commonly used theoretical networks accurately predicted only 30–50% of landscape connectivity in such environments. Conclusions Very high-resolution trajectories were generally necessary to accurately identify complex network topologies and avoid the generation of spurious information on landscape connectivity. New technologies providing such high-resolution datasets over long periods should thus grow in the movement ecology sphere. In addition, commonly used theoretical models should be applied with caution to the study of landscape connectivity in real-world systems as they did not perform well as predictive tools.

Climate affects seasonality and plant phenology, which can influence seasonal body mass dynamics of herbivores in temperate environments. We investigated long‐term trends of seasonal body mass changes in male Alpine ibex Capra ibex. We used SEM to test direct and indirect relationships between body mass, mass changes and environmental and climatic variables. Individually recognizable Alpine ibex were weighed repeatedly between 2000 and 2022 in Gran Paradiso National Park (Italy). Autumn mass increased substantially over these two decades, up to 15% in some age classes. Over the same time frame, both summer mass gain and winter mass loss decreased, suggesting that heavier autumn body mass was due to the cumulative effects of reduced mass loss over several winters. The environmental factor with the strongest effects on winter mass changes was the starting date of vegetation green‐up at low altitude, where ibex gather after winter to feed on new growth vegetation. Early springs led to lower winter mass loss, likely because ibex relied on stored fat for a shorter period and had greater access to forage. High population density also increased winter mass loss. Environmental conditions and resource availability, possibly also influenced by density in winter and early spring, seem therefore to directly affect the body mass dynamics of male Alpine ibex, while the effect of summer conditions appears less relevant. By affecting seasonal body mass dynamics, climate change may have consequences for life history and population dynamics of mountain herbivores, for example via earlier access of young males to reproduction. [ABSTRACT FROM AUTHOR]

Improving the understanding of the causes and effects of anthropogenic hybridization is fundamental to ensure species conservation, particularly in the case of hybridization between wild species and their domestic relatives. Knowledge is missing for many species also because of a lack of appropriate tools for hybrid identification. Here, coupling genotype and phenotype analysis, we carried out an extensive investigation of ongoing hybridization in Alpine ibex Capra ibex, a mountain ungulate of conservation concern from a genetic perspective. By genotyping 63 diagnostic and 465 neutral SNPs, 20 suspected hybrids and 126 Alpine ibex without suspicious phenotype, representing 8 populations across a major part of the species distribution, we found evidence for ongoing hybridization between Alpine ibex and domestic goat. We identified different levels of hybridization including backcrosses into both Alpine ibex and domestic goat. Our results suggest a lack of reproductive barriers between the two species and good survival and reproductive success of the hybrids. Hybridization was locally intense, like a hybrid swarm, but not spread across the rest of the species distribution. Most of the hybrids were discovered in two locations in the north‐west of Italy, while random sampling of individuals from different areas did not provide evidence of recent hybridization. Our method, based on amplicon sequencing of 63 diagnostic SNPs specifically developed for this purpose, allowed us to identify hybrids and backcrosses up to the fourth to fifth generations and was suitable for genetic samples of different quality, although with varying levels of certainty regarding the exact number of generations passed since hybridization. Based on the paired analysis of genotype and phenotype, we provide guidelines for the first identification of hybrids in the field and suggest a procedure for the reliable identification of hybrids. [ABSTRACT FROM AUTHOR]

Simple Summary: Ticks are spreading at high altitudes in mountain areas and can come into contact with previously unexposed or poorly exposed hosts, such as Alpine ibex (Capra ibex). We collected ticks on ibex and vegetation in the northwestern Italian Alps and tested them for tick-borne pathogens. Ixodes ricinus was the most abundant tick species collected and was infected with Borrelia burgdorferi s.l., Rickettsia spp. and Anaplasma phagocytophilum. Our results suggest that Alpine ibex, like other wild ungulate species, may act as a reservoir for A. phagocytophilum while being an incompetent reservoir for the Lyme borreliosis agent. Future studies should monitor the possible impacts of ticks and transmitted pathogens on the health and conservation of ibex. In the Maritime Alps (northwestern Italy), we collected ticks from vegetation and Alpine ibex (Capra ibex). Ixodes ricinus was the most abundant species in the study area, questing up to 1824 m a.s.l. and infesting 28 out of 72 ibexes. Haemaphysalis punctata, H. sulcata and Dermacentor marginatus were also collected. The abundance of questing ticks significantly decreased with altitude, with beechwoods being the preferred habitat. By PCR, we identified Borrelia burgdorferi s.l. in questing I. ricinus (28.3%; 95%CI: 19.4–38.6) but not in specimens collected from animals. Rickettsia spp. infected both questing (20.6%; 95%CI: 12.9–30.3) and on-host (30.2%; 95%CI: 21.2–40.4) I. ricinus. Anaplasma phagocytophilum was detected in 4.3% (95%CI: 1.2–10.8) of questing I. ricinus and in 45.3% (95%CI: 34.6–56.4) of I. ricinus collected from ibex. Female I. ricinus collected on animals were significantly more infected with A. phagocytophilum than females collected from vegetation (OR = 11.7; 95%CI: 3.8–48.1). By amplifying and sequencing a fragment of the groEL gene, we identified 13 groEL haplotypes, clustering with ecotypes I and II; ecotype I, prevalent in our sample, is considered zoonotic. Our study demonstrates the presence of different tick-borne zoonotic agents in the study area, encompassing a wide altitudinal range, as confirmed by the ticks found on ibex, a typical mountain-dwelling mammal. The results also confirm the altitudinal range expansion of ticks and associated pathogens in the Alps and suggest that Alpine ibex may act as a reservoir for A. phagocytophilum, as do other wild ungulate species. [ABSTRACT FROM AUTHOR]

The environmental conditions experienced by hunter‐gatherers during the second part of the Upper Palaeolithic (ca. 28 000–15 000 cal bp) are poorly known in the mid‐elevation volcanic mountains of the Massif Central in southern France. The stable isotope ratios of carbon and nitrogen (13C/12C and 15N/14N expressed as δ13C and δ15N values) in bone collagen of large herbivores can track their diet and habitat, reflecting local abiotic conditions (temperature, aridity, altitude). Due to poor preservation of skeletal organic matter in the region, new radiocarbon dating was conducted on a limited number of quality‐controlled collagen samples, based on a minimum carbon content of 30%. They document three main phases of occupation corresponding to the Final Gravettian, the Badegoulian and the Magdalenian, each of which is represented in different regions of the Allier and Loire valleys. Over time, a decrease in horse δ15N values, the best documented species of large herbivores, is found between the Final Gravettian (ca. 26 700–25 600 cal bp), around the Last Glacial Maximum and the Badegoulian (ca. 21 900–19 200 cal bp), followed by an increase in δ15N and δ13C values during the Magdalenian (ca. 19 100–16 600 cal bp). During the Badegoulian, the δ15N values of the horses were lower than those of their counterparts in southwestern France, testifying to harsh climatic conditions favourable to a tundra‐like landscape, also reflected in the higher horse and reindeer δ13C values in the Allier valley compared to those in southwestern France. The relatively high δ13C and low δ15N values of a Final Gravettian wolf from the Allier valley suggests reindeer as a preferred prey, in line with their high abundance in the archaeological sites. Game access, rather than climatic conditions or lithic resources, seems to have motivated human groups to occupy the Massif Central during the Upper Palaeolithic. [ABSTRACT FROM AUTHOR]

Also known as "resurrection biology", de-extinction is reviving extinct species. Once known as science fiction, bringing species back to once-extinct life has gained much media attention with technological advances like genetics, selective breeding, and cloning. The Pyrenean ibex (aka bucardo in Spanish) is one of the subspecies of Iberian wild goat or Iberian ibex, which went extinct in 2000 when the last female Pyrenean ibex died. Recent genomics and nuclear transfer advancements have enabled reviving of extinct species. This study will discuss the state of the art of various de-extinction technologies that can help revive extinct species like Pyrenean ibex and related challenges. This study will be based on secondary data collected from recent studies on de-extinction, Pyrenean ibex, and the revival of extinct species to fulfill this objective. Different processes are recommended for de-extinction, out of which cloning is widely proposed, even though selective breeding and genome editing have been used. [ABSTRACT FROM AUTHOR]

Thyroid hormones play a role in the control of seasonal reproduction in wild and domestic ruminants such as red deer and sheep. Horn growth shows an inverse relationship with reproductive activity, but the effect of thyroid function on the regulation of the seasonal pattern of horn growth is unknown. This work examines the seasonal pattern of plasma thyroxine concentration, and its effect on testosterone secretion and seasonal changes in horn growth, in male Iberian ibexes (Capra pyrenaica). Plasma testosterone, plasma thyroxine, and horn growth were measured over a year in four males kept under natural photoperiod conditions. In another four, thyroxine was administered coinciding with the period of physiological reduction in plasma testosterone (January–February). In the first four, seasonal changes in the plasma concentration of thyroxine were detected with the highest concentrations recorded in October, November, and December, coinciding with the greatest testosterone secretion. In the second four, thyroxine treatment affected neither plasma testosterone concentration nor horn growth. The plasma concentrations of testosterone and thyroxine appear to be closely related in the ibex, but the seasonal pattern of horn growth does not seem to be modulated by seasonal changes in thyroxine. [ABSTRACT FROM AUTHOR]

Simple Summary: Infectious keratoconjunctivitis is an eye disease caused by Mycoplasma conjunctivae that affects domestic and wild caprines, including Iberian ibex (Capra pyrenaica) and domestic sheep and goats. This study assessed M. conjunctivae in the host community of the Natural Space of Sierra Nevada (NSSN), a mountain habitat in southern Spain. Mycoplasma conjunctivae strains circulated endemically without causing clinical signs in Iberian ibex and livestock, either shared or maintained independently by each host species. In Iberian ibex, endemic infection was maintained by naïve subadults, with an epizootic outbreak when the infection spread to adults. Goat was at least as important as sheep in maintaining M. conjunctivae. The results suggest that the epidemiological role of wild ungulates should be considered in mountain ecosystems, as their mobility may contribute to the spread of IKC and other shared pathogens among spatially segregated livestock flocks. Infectious keratoconjunctivitis (IKC) is an eye disease caused by Mycoplasma conjunctivae that affects domestic and wild caprines, including Iberian ibex (Capra pyrenaica), a medium-sized mountain ungulate. However, its role in IKC dynamics in multi-host communities has been poorly studied. This study assessed M. conjunctivae in Iberian ibex and seasonally sympatric domestic small ruminants in the Natural Space of Sierra Nevada (NSSN), a mountain habitat in southern Spain. From 2015 to 2017, eye swabs were collected from 147 ibexes (46 subadults, 101 adults) and 169 adult domestic small ruminants (101 sheep, 68 goats). Mycoplasma conjunctivae was investigated through real-time qPCR and statistically assessed according to species, sex, age category, year, period, and area. The lppS gene of M. conjunctivae was sequenced and phylogenetically analysed. Mycoplasma conjunctivae was endemic and asymptomatic in the host community of the NSSN. Three genetic clusters were shared by ibex and livestock, and one was identified only in sheep, although each host species could maintain the infection independently. Naïve subadults maintained endemic infection in Iberian ibex, with an epizootic outbreak in 2017 when the infection spread to adults. Wild ungulates are epidemiologically key in maintaining and spreading IKC and other shared diseases among spatially segregated livestock flocks. [ABSTRACT FROM AUTHOR]

The increased pressures generated by human activities in form of climate change and habitat fragmentation have caused serious threats for Sindh ibex (Capra aegagrus blythii). Balochistan, recognized as one of the most vulnerable regions to climate change in Pakistan, has limited data on the distribution and population status of this species. To address this gap, our study aims to assess the spatial and temporal distribution and population trend of Sindh ibex in the Khuzdar and Lasbela districts of Balochistan. The study covered an area of approximately 45,123.97 km2. It involved a double-observer survey at ten sites from 2019 to 2022, using the BBRecapture package in the R programming language to estimate ibex population trend and dispersion. We provided a comprehensive update of the species geographic range, along with estimates of its current abundance and population trends. Over the course of four years, the ibex population fluctuated. The ibexes detected dropped from 720 (male to female ratio 1:1.21) and 710 (male to female ratio 1:1.08) in 2019 and 2020, respectively, to 550 (male to female ratio 1:1.35) and 548 (male to female ratio 1:1.09). Overall, this study provides valuable insights into the population trends, gender ratios, habitat preferences, and density of Sindh ibex in Balochistan over the four-year period. These findings contribute significantly to the baseline data on the species ecology and will further help in the conservation of these species at local scale. [ABSTRACT FROM AUTHOR]

Abstract Improving the understanding of the causes and effects of anthropogenic hybridization is fundamental to ensure species conservation, particularly in the case of hybridization between wild species and their domestic relatives. Knowledge is missing for many species also because of a lack of appropriate tools for hybrid identification. Here, coupling genotype and phenotype analysis, we carried out an extensive investigation of ongoing hybridization in Alpine ibex Capra ibex, a mountain ungulate of conservation concern from a genetic perspective. By genotyping 63 diagnostic and 465 neutral SNPs, 20 suspected hybrids and 126 Alpine ibex without suspicious phenotype, representing 8 populations across a major part of the species distribution, we found evidence for ongoing hybridization between Alpine ibex and domestic goat. We identified different levels of hybridization including backcrosses into both Alpine ibex and domestic goat. Our results suggest a lack of reproductive barriers between the two species and good survival and reproductive success of the hybrids. Hybridization was locally intense, like a hybrid swarm, but not spread across the rest of the species distribution. Most of the hybrids were discovered in two locations in the north‐west of Italy, while random sampling of individuals from different areas did not provide evidence of recent hybridization. Our method, based on amplicon sequencing of 63 diagnostic SNPs specifically developed for this purpose, allowed us to identify hybrids and backcrosses up to the fourth to fifth generations and was suitable for genetic samples of different quality, although with varying levels of certainty regarding the exact number of generations passed since hybridization. Based on the paired analysis of genotype and phenotype, we provide guidelines for the first identification of hybrids in the field and suggest a procedure for the reliable identification of hybrids.

In the course of a survey of the endoparasites of Alpine ibex (Capra ibex) from Austria, examination of the lungs revealed male Protostrongylus nematodes presenting morphological characters which differed from those of the three Protostrongylus species previously reported from this host. Fragments of 16 adult male and 4 adult female nematodes extracted from the lung tissue of two female ibex following peptic digestion were subjected to close microscopic examination. Based on their morphology, the lungworms were identified as Protostrongylus caprae Zdzitowiecki et Boev, 1971. This species was originally described from Siberian ibex (Capra sibirica) in Asia and previously only reported from this host from Kazakhstan and Mongolia. The identification of P. caprae in Alpine ibex represents a new host and geographical record and reinforces the interest to further study the parasite diversity of wild ungulates for a better understanding of complex host-parasite associations and biogeography.

Flexibility in activity timing may enable organisms to quickly adapt to environmental changes. Under global warming, diurnally adapted endotherms may achieve a better energy balance by shifting their activity towards cooler nocturnal hours. However, this shift may expose animals to new or increased environmental challenges (e.g. increased predation risk, reduced foraging efficiency). We analysed a large dataset of activity data from 47 ibex (Capra ibex) in two protected areas, characterized by varying levels of predation risk (presence versus absence of the wolf—Canis lupus). We found that ibex increased nocturnal activity following warmer days and during brighter nights. Despite the considerable sexual dimorphism typical of this species and the consequent different predation-risk perception, males and females demonstrated consistent responses to heat in both predator-present and predator-absent areas. This supports the hypothesis that shifting activity towards nighttime may be a common strategy adopted by diurnal endotherms in response to global warming. As nowadays different pressures are pushing mammals towards nocturnality, our findings emphasize the urgent need to integrate knowledge of temporal behavioural modifications into management and conservation planning. [ABSTRACT FROM AUTHOR]

After the domestication of goats around 10,000 years before the present (BP), humans transported goats far beyond the range of their wild ancestor, the bezoar goat. This brought domestic goats into contact with many wild goat species such as ibex and markhor, enabling introgression between domestic and wild goats. To investigate this, while shedding light on the taxonomic status of wild and domestic goats, we analysed genome‐wide SNP data of 613 specimens from 14 taxonomic units, including Capra hircus, C. pyrenaica, C. ibex (from Switzerland, Austria, Germany and Slovenia), C. aegagrus aegagrus, C. a. cretica, C. h. dorcas, C. caucasica caucasica, C. c. severtzovi, C. c. cylindricornis, C. falconeri, C. sibirica sibirica, C. s. alaiana and C. nubiana, as well as Oreamnos americanus (mountain goat) as an outgroup. To trace gene flow between domestic and wild goats, we integrated genotype data of local goat breeds from the Alps as well as from countries such as Spain, Greece, Türkiye, Egypt, Sudan, Iran, Russia (Caucasus and Altai) and Pakistan. Our phylogenetic analyses displayed a clear separation between bezoar‐type and ibex‐type clades with wild goats from the Greek islands of Crete and Youra clustered within domestic goats, confirming their feral origin. Our analyses also revealed gene flow between the lineages of Caucasian tur and domestic goats that most likely occurred before or during early domestication. Within the clade of domestic goats, analyses inferred gene flow between African and Iberian goats. The detected events of introgression were consistent with previous reports and offered interesting insights into the historical relationships among domestic and wild goats. [ABSTRACT FROM AUTHOR]

Monitoring population dynamics is of fundamental importance in conservation but assessing trends in abundance can be costly, especially in large and rough areas. Obtaining trend estimations from counts performed in only a portion of the total area (sample counts) can be a cost‐effective method to improve the monitoring and conservation of species difficult to count. We tested the effectiveness of sample counts in monitoring population trends of wild animals, using as a model population the Alpine ibex Capra ibex in the Gran Paradiso National Park (Italy), both with computer simulations and using historical count data collected over the last 65 years. Despite sample counts failed to correctly estimate the true population abundance, sampling half of the target area could reliably monitor the trend of the target population. In case of strong changes in abundance, an even lower proportion of the total area could be sufficient to identify the direction of the population trend. However, when there is a high yearly trend variability, the required number of samples increases and even counting in the entire area can be ineffective to detect population trends. The effect of other parameters, such as which portion of the area is sampled and detectability, was lower, but these should be tested case by case. Sample counts could therefore constitute a viable alternative to assess population trends, allowing for important, cost‐effective improvements in the monitoring of wild animals of conservation interest. [ABSTRACT FROM AUTHOR]

AbstractThe present study was designed with the aim to study morphometric characterization as well as phylogeny and diversity of the local Surguli goat at their breeding tract district Kohat through mitochondrial DNA region, i.e., Cytochrome C Oxidase Subunit One (CO1) gene. Morphometric data and blood samples were collected from thirty (30) pure goats. Morphometric analysis showed that sex had significant effect (p < 0.05) on body weight, body length, hearth girth and horn length while no significant effect (p > 0.05) was observed for other characteristics. The results also indicated that age had significant effect (p < 0.05) on height at rump, ear length, horn length and tail length while no significant effect (p > 0.05) was observed for other characteristics. The phylogenetic analysis through CO1 nucleotide sequences within nucleotide range 1–767 showed nine polymorphic sites segregating into eight haplotypes. The mean intraspecific diversity and mean interspecific diversity were calculated as 0.23 and 2.36%, respectively. Phylogenetic tree revealed that Capra Ibex and native Surguli goat have common ancestors. The morphometric and molecular results obtained from the present study can be exploited as a selection tool for breeding and overall improvement. [ABSTRACT FROM AUTHOR]

In the course of a survey of the endoparasites of Alpine ibex (Capra ibex) from Austria, examination of the lungs revealed male Protostrongylus nematodes presenting morphological characters which differed from those of the three Protostrongylus species previously reported from this host. Fragments of 16 adult male and 4 adult female nematodes extracted from the lung tissue of two female ibex following peptic digestion were subjected to close microscopic examination. Based on their morphology, the lungworms were identified as Protostrongylus caprae Zdzitowiecki et Boev, 1971. This species was originally described from Siberian ibex (Capra sibirica) in Asia and previously only reported from this host from Kazakhstan and Mongolia. The identification of P. caprae in Alpine ibex represents a new host and geographical record and reinforces the interest to further study the parasite diversity of wild ungulates for a better understanding of complex host-parasite associations and biogeography. [Display omitted] • Lungworms of the species Protostrongylus caprae were found for the first time in Alpine ibex from Austria. • Detailed morphometric description and illustration of the species on material of Alpine ibex. • Alpine ibex represents a new host and Europe a new geographical record for Protostrongylus caprae. [ABSTRACT FROM AUTHOR]

In the Maritime Alps (northwestern Italy), we collected ticks from vegetation and Alpine ibex (Capra ibex). Ixodes ricinus was the most abundant species in the study area, questing up to 1824 m a.s.l. and infesting 28 out of 72 ibexes. Haemaphysalis punctata, H. sulcata and Dermacentor marginatus were also collected. The abundance of questing ticks significantly decreased with altitude, with beechwoods being the preferred habitat. By PCR, we identified Borrelia burgdorferi s.l. in questing I. ricinus (28.3%; 95%CI: 19.4–38.6) but not in specimens collected from animals. Rickettsia spp. infected both questing (20.6%; 95%CI: 12.9–30.3) and on-host (30.2%; 95%CI: 21.2–40.4) I. ricinus. Anaplasma phagocytophilum was detected in 4.3% (95%CI: 1.2–10.8) of questing I. ricinus and in 45.3% (95%CI: 34.6–56.4) of I. ricinus collected from ibex. Female I. ricinus collected on animals were significantly more infected with A. phagocytophilum than females collected from vegetation (OR = 11.7; 95%CI: 3.8–48.1). By amplifying and sequencing a fragment of the groEL gene, we identified 13 groEL haplotypes, clustering with ecotypes I and II; ecotype I, prevalent in our sample, is considered zoonotic. Our study demonstrates the presence of different tick-borne zoonotic agents in the study area, encompassing a wide altitudinal range, as confirmed by the ticks found on ibex, a typical mountain-dwelling mammal. The results also confirm the altitudinal range expansion of ticks and associated pathogens in the Alps and suggest that Alpine ibex may act as a reservoir for A. phagocytophilum, as do other wild ungulate species.

Assisted reproductive technologies are key to maintain genetic stocks of endangered wild species, such as the Iberian ibex (Capra pyrenaica). Due to the low availability of ibex ovaries, heterologous in vitro fertilization (IVF) with domestic goat (Capra hircus) oocytes constitutes an excellent alternative to determine the fertilization capacity of ibex sperm doses. The aim of this study was to optimize heterologous ibex-goat IVF procedures by testing two different IVF media (TALP and SOF) and to determine whether estrous sheep serum (ESS) is required for fertilization. We found that TALP medium provides optimal conditions to conduct heterologous ibex-goat IVF, yielding blastocyst rates above 50%, and that supplementation with ESS is not required. No differences were found in embryo quality between embryos fertilized in TALP, SOF alone, or SOF supplemented with 2 or 20% ESS, based on the analysis of cell lineages development at day (D) 8 and D10 of development. Optimized heterologous ibex-goat IVF, together with embryo quality assessment through lineages development analysis, constitute an excellent system to assess fertilization capacity of ibex sperm doses, and opens the possibility of performing homologous in vitro embryo production in this species.

Climate change is shifting the transmission of parasites, which is determined by host density, ambient temperature and moisture. These shifts can lead to increased pressure from parasites, in wild and domestic animals, and can impact the effectiveness of parasite control strategies. Understanding the interactive effects of climate on host movement and parasite life histories will enable targeted parasite management, to ensure livestock productivity and avoid additional stress on wildlife populations. To assess complex outcomes under climate change, we applied a gastrointestinal nematode transmission model to a montane wildlife–livestock system, based on host movement and changes in abiotic factors due to elevation, comparing projected climate change scenarios with the historic climate. The wildlife host, Alpine ibex (Capra ibex ibex), undergoes seasonal elevational migration, and livestock are grazed during the summer for eight weeks. Total parasite infection pressure was more sensitive to host movement than to the direct effect of climatic conditions on parasite availability. Extended livestock grazing is predicted to increase parasite exposure for wildlife. These results demonstrate that movement of different host species should be considered when predicting the effects of climate change on parasite transmission, and can inform decisions to support wildlife and livestock health.

Identifying the role that host species play in pathogen transmission and maintenance is crucial for disease control, but it is a difficult task, in particular for vector-borne and multi-host pathogens, and especially when wildlife species are involved. This is the case for a Crimean-Congo hemorrhagic fever virus (CCHFV) hotspot in north-eastern Spain, where Iberian ibex (Capra pyrenaica) and wild boar (Sus scrofa) are involved, but their roles in disease transmission are unclear. In this context, we studied the dynamics of CCHFV transmission in these two species during the collapse of an Iberian ibex population due to a sarcoptic mange outbreak. We carried out a repeated cross-sectional study measuring the trends of CCHFV seroprevalence in Iberian ibex and wild boar and their abundances. In addition, we identified the tick species present in this area on the vegetation and on wild boars, and evaluated relevant meteorological factors. Results show that while the trends in CCHFV seroprevalence in Iberian Ibex and density of wild boars remained constant (p = 1.0 and p = 0.8, respectively), both the trends in Iberian ibex census and CCHFV seroprevalence in wild boars decreased significantly (p = 0.003 and p = 0.0001, respectively), and were correlated (Spearman's rank, 0.02

Context: In the epididymis, epithelial cells manage changes in the luminal environment for proper sperm maturation. Moreover, aquaglyceroporins, a subgroup of aquaporins (AQP), modulate the transport of water, glycerol and other small molecules in epithelial cells. Aims: We aim to characterise the lining epithelium, quantify its cell composition and immunolocalise the aquaglyceroporins AQP3, AQP7, AQP9 and AQP10 alongside the epididymal ductus of three wild ruminant species, and to determine if species-specific differences could be associated with cauda sperm cryoresistance variations. Methods: Epididymides from Iberian ibex (n = 5), mouflon (n = 5) and chamois (n = 6) were obtained. Cauda spermatozoa were collected and sperm parameters were analysed before and after freezing. Histology and immunohistochemistry of AQP3, 7, 9, 10 and T-CD3 were performed in the caput, corpus and cauda epididymal regions. Key results: This work first describes the lining epithelium in Iberian ibex, mouflon and chamois epididymis along the three anatomical regions, consisting of principal, basal, apical, clear and halo cells. However, the percentage of each cell type differed in ibex compared to mouflon and chamois. The positive T-CD3 immunolabeling of all the halo cells confirmed their T-lymphocyte nature. Aquaglyceroporin expression patterns were similar among species, except for differences in AQP7 and AQP10 immunolocalisation in ibex. Species-specific differences in epididymal sperm cryoresistance were confirmed. Conclusions: The epididymal epithelium of the three wild ruminants differ in their relative number of cell types and AQP immunolocalisation, which ultimately appears to affect cauda epidydimal spermatozoa cryoresistance. Implications: Our study provides information on the relevance of the quantitative composition and AQP pattern expression in epididymal lining epithelium on sperm cryoresistance. Illustrative photograph of aquaglyceroporin immunolabeling (AQP9 expression in corpus region of Iberian ibex epididymis) Illustrative photograph of aquaglyceroporin immunolabeling (AQP9 expression in corpus region of Iberian ibex epididymis) This work describes the lining epithelium and expression patterns of aquaglyceroporins (AQP3, AQP7, AQP9 and AQP10) in the Iberian ibex, mouflon and chamois epididymis. Species-specific differences in cauda epididymal sperm cryoresistance were confirmed. Differences among the three wild ruminant epididymides in the relative number of epithelial cell types and the immunolocalisation of AQP7 and AQP10 appear to affect the cryoresistance of cauda epididymal spermatozoa. Photograph by Carlos Martínez-Cáceres. [ABSTRACT FROM AUTHOR]

We analyzed observations of energetic neutral atoms (ENAs) of hydrogen collected from the subsolar magnetosheath by the Interstellar Boundary Explorer (IBEX) in Solar Cycle 24. We looked for long‐term solar activity‐related variation and correlation between the H ENA flux and the solar wind parameters. The H ENA flux in the energy range from 0.5 to 6 keV increased during the maximum and declining phases of the solar cycle. This H ENA flux increase happened during a period of enhanced solar wind dynamic pressure observed at 1 au. We study the relation between the ENA flux and solar wind pressure in the subsolar magnetosheath and conclude that the increase in the ENA flux is a consequence of enhanced ENA production. It is because of the increased solar wind pressure during the declining phase of the solar activity that moved the subsolar magnetosheath earthward into a region of denser hydrogen geocorona, thus increasing the H ENA production. Furthermore, we report a positive correlation between the H ENA flux in the subsolar magnetosheath and the solar wind pressure for the first four energy steps observed by IBEX‐Hi and a decrease for the highest energy acquired, which indicates the presence of a different parent ion population for those ENAs from that of the core solar wind. Our study also shows that the ENA flux correlates differently with the solar wind density and speed as a function of increasing energy of ENAs. Key Points: The H energetic neutral atom (ENA) flux in the subsolar magnetosheath measured by Interstellar Boundary Explorer increased during the declining phase of the Solar Cycle 24The H ENA flux variations in the subsolar magnetosheath are positively correlated with the solar wind dynamic pressure variations in time [ABSTRACT FROM AUTHOR]

The Alpine ibex is one of the finest examples of how human’s attitude towards nature is changing by becoming aware of biodiversity conservation. On the 30th anniversary of the first Alpine ibex reintroduction in the Orobie Alps, a three year long Citizen Science Project started in June 2017 (‘Stambecco Orobie e Lombardia’). Nowadays, a complementary tool that can be used in data collection is citizen science; its use among scientific community is increasing and it is considered a new opportunity for the future of science. A three-year project (from 2017 to 2019) took place in the Orobie Alps (Bergamo, Italy), with the collection of 2,530 photographs of Alpine ibex (Capra ibex ibex). A total of 735 citizen scientists took part in the project by gathering data and collecting pictures (225 in 2017, 248 in 2018 and 262 in 2019). Photographs, complete with technical descriptions, were posted on the project’s Facebook page and the Instagram page and each one was georeferenced on the ArcGis platform and a web mapping application. The georeferenced images helped comparing the expansion zones of Lombard Alpine ibex colonies to the ones identified in a preliminary study. The images also turned out to be a useful tool in monitoring population health. These methods may help to avoid data dispersion and may raise public awareness of Alpine ibex conservation policies.

Infectious keratoconjunctivitis (IKC) is an eye disease caused by Mycoplasma conjunctivae that affects domestic and wild caprines, including Iberian ibex (Capra pyrenaica), a medium-sized mountain ungulate. However, its role in IKC dynamics in multi-host communities has been poorly studied. This study assessed M. conjunctivae in Iberian ibex and seasonally sympatric domestic small ruminants in the Natural Space of Sierra Nevada (NSSN), a mountain habitat in southern Spain. From 2015 to 2017, eye swabs were collected from 147 ibexes (46 subadults, 101 adults) and 169 adult domestic small ruminants (101 sheep, 68 goats). Mycoplasma conjunctivae was investigated through real-time qPCR and statistically assessed according to species, sex, age category, year, period, and area. The lppS gene of M. conjunctivae was sequenced and phylogenetically analysed. Mycoplasma conjunctivae was endemic and asymptomatic in the host community of the NSSN. Three genetic clusters were shared by ibex and livestock, and one was identified only in sheep, although each host species could maintain the infection independently. Naïve subadults maintained endemic infection in Iberian ibex, with an epizootic outbreak in 2017 when the infection spread to adults. Wild ungulates are epidemiologically key in maintaining and spreading IKC and other shared diseases among spatially segregated livestock flocks.

In Europe, the Alpine ibex (Capra ibex) was on the brink of extinction in the 19th century. Therefore, different conservation measures were implemented, and several reintroductions were made in the Alpine arc, starting from the only surviving population in Gran Paradiso, Italy. An extreme historical bottleneck and additional reintroductions have strongly shaped the genetic make-up of recent populations, resulting in significant genetic drift and profound inbreeding across the species range. To support science-based conservation actions, molecular methods have been increasingly used. However, such analyses did not include populations in Slovenia. We analysed neutral loci (partial fragment of mitochondrial cytochrome b, mtDNA) and the adaptive major histocompatibility complex (MHC DRB exon 2) of the Alpine ibex from both Slovenian populations (Julian and Kamnik-Savinja Alps) to understand how past reintroductions and recent management have affected the genetic diversity of the species. Results showed that both populations are genetically severely depleted, carrying only one mtDNA haplotype and one functional allele for MHC DRB exon 2, Caib-DRB*01. This calls for further conservation actions, including the reintroduction of individuals with different genetic background. However, the Alpine ibex is currently considered a non-native species in Slovenia, which makes conservation actions extremely difficult and threatens the long-term survival of the species. Therefore, scientists and population managers are urging policy/decision makers to change the status of the species to the native one and consequently to allow reintroductions. These appeals are supported by previous archaeological data on the existence of bones assigned to Alpine ibex in the Julian Alps, and evidence of severe genetic depletion in current ibex populations confirmed in this study. PRVI VPOGLED V GENETSKO RAZNOLIKOST ALPSKEGA KOZOROGA (Capra ibex) V SLOVENIJI Izvleček: V Evropi je bil alpski kozorog (Capra ibex) v 19. stoletju na robu izumrtja. Izvajali so se različni ukrepi za njegovo ohranjanje. V alpskem loku je bilo izvedenih več ponovnih naselitev, najprej z edino ohranjeno populacijo v kraju Gran Paradiso v Italiji. Izredna okrnjenost vrste v preteklosti in dodatne ponovne naselitve so močno vplivale na genetsko sestavo populacije, kar je povzročilo znaten genetski zdrs in parjenje v sorodstvu na celotnem območju vrste. V podporo znanstveno utemeljenim ukrepom ohranjanja se vse pogosteje uporabljajo molekularne metode, vendar takšne analize niso vključevale populacij v Sloveniji. Da bi razumeli, kako je ponovno naseljevanje in nedavno upravljanje vplivalo na genetsko raznolikost vrste, smo analizirali nevtralne lokuse (delni fragment mitohondrijskega citokroma b, mtDNA) in adaptivni poglavitni histokompatibilnostni kompleks (MHC DRB ekson 2) alpskega kozoroga iz obeh slovenskih populacij (Julijske in Kamniško-Savinjske Alpe). Rezultati so pokazali, da sta obe populaciji genetsko zelo osiromašeni, saj nosita le en haplotip mtDNA in en funkcionalni alel za MHC DRB ekson 2, Caib-DRB*01. Zato so potrebni nadaljnji ukrepi za ohranjanje, vključno s ponovno naselitvijo živali z drugačnim genetskim ozadjem. Vendar alpski kozorog v Sloveniji trenutno velja za tujerodno vrsto, kar zelo otežuje ukrepe za njegovo ohranitev in ogroža dolgoročno preživetje vrste. Znanstveniki in upravljavci populacij zato pozivajo politike/odločevalce, naj spremenijo status vrste v avtohtono in posledično omogočijo ponovno naselitev. Ti pozivi so podprti s predhodnimi arheološkimi podatki o obstoju kosti alpskega kozoroga v Julijskih Alpah in z dokazi o izraziti genetski osiromašenosti sedanjih populacij kozoroga, potrjenimi v tej študiji. Ključne besede: Capra ibex; mitohondrijska DNA; MHC DRB exon2; ponovna naselitev; upravljanje

This issue’s cover illustration depicting the Alpine ibex against the backdrop of iconic Slovenia's Triglav mountain is inspired by the manuscript by Bužan et al. and serves as a poignant reminder of a lost legacy and biodiversity due to greed and overhunting. These magnificent creatures thrived entire European Alpine region before their extermination in the 19th century, with the only surviving wild population of Alpine ibex in the Gran Paradiso National Park (then a royal hunting reserve) in Italy. Reintroduction initiatives from this small population have since rebounded ibex to tens of thousands across the Alpine region. However, as the article on the Slovenian population of Alpine ibex by Bužan et al. in this issue clearly shows, while current numbers seem more promising, the genetic bottleneck they experienced from this near-extinction event has left lasting impacts on their genetic diversity. REŠEVANJE ALPSKEGA KOZOROGA: GENETSKI IN ZDRAVSTVENI PROBLEMI SLOVENSKIH KOZOROGOV S ŠIRŠIMI POSLEDICAMI ZA BIODIVERZITETO Ilustracija na naslovnici te številke, ki prikazuje alpskega kozoroga pred ikonično Triglavsko goro Slovenije, je navdihnjena po članku Bužan s sod., objavljenem v tej številki, in služi kot opomin izgubljeni dediščini in biodiverziteti zaradi pohlepa in prekomernega lova. Te veličastne živali so uspevale v celotni evropski Alpski regiji, preden so bile iztrebljene v 19. stoletju, z edino preživelo divjo populacijo v Narodnem parku Gran Paradiso (takrat kraljevi lovski rezervat) v Italiji. Ponovne naselitve iz te majhne populacije so od takrat od danes dvignile število kozorogov na deset tisoče v celotni Alpski regiji. Vendar, kot članek o slovenski populaciji alpskih kozorogov avtorice Bužan s sod. jasno kaže, čeprav se trenutna številka zdi obetavna, pa je genetsko ozko grlo, nastalo zaradi prekomernega lova, pustilo trajne posledice na njihovi genetski raznolikosti.

Simple Summary: The Siberian ibex has a wide distribution, spanning various mountainous regions and cold deserts in countries like India, China, Pakistan, Kazakhstan, Tajikistan, Russia, and Mongolia. Our study specifically examined the Himalayan ibex, which is an edge population of Siberian ibex found in India. Through genomic analysis, we discovered that the Himalayan ibex evolved as a distinct lineage after separating from the main population around 100,000 years ago, due to geographical isolation. By studying the region's past geography using paleo-climatic models and deep sequencing data, we observed significant transformations, including high mountains and deep valleys, particularly in the Pamir range, likely played a significant role in the divergence and independent evolution of the Himalayan ibex, after experiencing two historic genetic bottlenecks. Based on our findings, we propose prioritizing the Himalayan ibex as a unique phylogenetic species and advocate for its conservation attention and taxonomic revision. Furthermore, we hope that our research will inspire collaborative efforts and discussions among different countries to address the conservation and management of ibex populations worldwide. Pleistocene glaciations had profound impact on the spatial distribution and genetic makeup of species in temperate ecosystems. While the glacial period trapped several species into glacial refugia and caused abrupt decline in large populations, the interglacial period facilitated population growth and range expansion leading to allopatric speciation. Here, we analyzed 40 genomes of four species of ibex and found that Himalayan ibex in the Pamir Mountains evolved independently after splitting from its main range about 0.1 mya following the Pleistocene species pump concept. Demographic trajectories showed Himalayan ibex experienced two historic bottlenecks, one each c. 0.8–0.5 mya and c. 50–30 kya, with an intermediate large population expansion c. 0.2–0.16 mya coinciding with Mid-Pleistocene Transitions. We substantiate with multi-dimensional evidence that Himalayan ibex is an evolutionary distinct phylogenetic species of Siberian ibex which need to be prioritized as Capra himalayensis for taxonomic revision and conservation planning at a regional and global scale. [ABSTRACT FROM AUTHOR]

Copyright of Gozdarski Vestnik is the property of Federation of Forestry Associations of Slovenia and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

France has been officially free of bovine brucellosis since 2005. Nevertheless, in 2012, as the source of two human cases, a bovine outbreak due to B. melitensis biovar 3 was confirmed in the French Alpine Bargy massif, due to a spillover from wild, protected Alpine ibex (Capra ibex). In order to reduce high Brucella prevalence in the local ibex population, successive management strategies have been implemented. Lateral flow immunochromatography assay (LFIA) was thus identified as a promising on-site screening test, allowing for a rapid diagnosis far from the laboratory. This study compared a commercial LFIA for brucellosis diagnosis with the WOAH-recommended tests for small ruminants (i.e., Rose Bengal test (RBT), Complement fixation test, (CFT) and Indirect ELISA, (iELISA)). LFIA showed the same analytical sensitivity as iELISA on successive dilutions of the International Standard anti-Brucella melitensis Serum (ISaBmS) and the EU Goat Brucella Standard Serum (EUGBSS). Selectivity was estimated at 100% when vaccinated ibex sera were analyzed. When used on samples from naturally infected ibex, LFIA showed high concordance, as well as relative sensitivity and specificity (>97.25%) in comparison with RBT and CFT. This work shows high reliability and ensures a better standardization of LFIA testing for wild ruminants. [ABSTRACT FROM AUTHOR]

In Europe, the Alpine ibex (Capra ibex) was on the brink of extinction in the 19th century. Therefore, different conservation measures were implemented, and several reintroductions were made in the Alpine arc, starting from the only surviving population in Gran Paradiso, Italy. An extreme historical bottleneck and additional reintroductions have strongly shaped the genetic make-up of recent populations, resulting in significant genetic drift and profound inbreeding across the species range. To support science-based conservation actions, molecular methods have been increasingly used. However, such analyses did not include populations in Slovenia. We analysed neutral loci (partial fragment of mitochondrial cytochrome b, mtDNA) and the adaptive major histocompatibility complex (MHC DRB exon 2) of the Alpine ibex from both Slovenian populations (Julian and Kamnik-Savinja Alps) to understand how past reintroductions and recent management have affected the genetic diversity of the species. Results showed that both populations are genetically severely depleted, carrying only one mtDNA haplotype and one functional allele for MHC DRB exon 2, Caib-DRB*01. This calls for further conservation actions, including the reintroduction of individuals with different genetic background. However, the Alpine ibex is currently considered a non-native species in Slovenia, which makes conservation actions extremely difficult and threatens the long-term survival of the species. Therefore, scientists and population managers are urging policy/decision makers to change the status of the species to the native one and consequently to allow reintroductions. These appeals are supported by previous archaeological data on the existence of bones assigned to Alpine ibex in the Julian Alps, and evidence of severe genetic depletion in current ibex populations confirmed in this study. [ABSTRACT FROM AUTHOR]

Iberian ibex (Caprapyrenaica) is an ecologically and economically relevant medium-sized emblematic mountain ungulate. Diseases participate in the population dynamics of the species as a regulating agent, but can also threaten the conservation and viability of vulnerable population units. Moreover, Iberian ibex can also be a carrier or even a reservoir of pathogens shared with domestic animals and/or humans, being therefore a concern for livestock and public health. The objective of this review is to compile the currently available knowledge on (1) diseases of Iberian ibex, presented according to their relevance on the health and demography of free-ranging populations; (2) diseases subjected to heath surveillance plans; (3) other diseases reported in the species; and (4) diseases with particular relevance in captive Iberian ibex populations. The systematic review of all the information on diseases affecting the species unveils unpublished reports, scientific communications in meetings, and scientific articles, allowing the first comprehensive compilation of Iberian ibex diseases. This review identifies the gaps in knowledge regarding pathogenesis, immune response, diagnostic methods, treatment, and management of diseases in Iberian ibex, providing a base for future research. Moreover, this challenges wildlife and livestock disease and wildlife population managers to assess the priorities and policies currently implemented in Iberian ibex health surveillance and monitoring and disease management. [ABSTRACT FROM AUTHOR]

In this paper we explore the usefulness of MaxEnt to predict the most suitable areas for a wildlife species, the Iberian ibex (Capra pyrenaica). For two decades (1990–2010), the species was established in a small part of the National Park Sierra de Guadarrama (Spain) and there has been a process of expansion to other areas of this protected area since 2010. However, almost two decades have elapsed since the modeling methods (MaxEnt) were proposed and no studies have tested their effectiveness using real distribution data, i.e. data from past predictions, to see if they fit the current distribution. We generated a model with presence– only data from 2007 and verified accuracy from 2017 data concerning real presence. Our results show a relationship between models and the species' current presence. The generated model can be useful to define the preferred locations of the species. We detected several differences between males and females of the species. This work not only shows the importance of selecting climatic and ecological variables for the construction of models but also indicates that they must be adjusted, at least for some species, to each sex and period of the year.

Abstract Rangelands are increasingly being affected by climatic variations, fragmentation and changes in livestock management practices. Along with resource competition between livestock and wildlife, disease transmission has implications for people and wildlife in these shared landscapes. We worked with two pastoral communities in the Western Indian Himalayas: the migratory Kinnauras that travel to the Trans-Himalayan Pin valley in summer and the resident herders of Pin Valley. Asiatic ibex (Capra sibirica) is the predominant wild herbivore in Pin. The pastures in Pin are grazed by both livestock (migratory and resident) and ibex, with the potential for disease transmission. We investigate the effects of herding practices on livestock health and disease transmission, while focusing on gastro-intestinal nematodes (GINs) as they can spread by sharing pasture between wild and domestic ungulates. Surveys were carried out between June and August 2019, the period when migratory Kinnauras, local herders and Asiatic Ibex are found in Pin Valley. We found that the Kinnaura flocks share pasture with ibex during their time in Pin, exhibiting significantly higher endo-parasite burdens than sedentary livestock, and the Kinnaura flocks are increasing in number. This suggests GIN cross-transmission is possible, as GINs have low host specificity and a free-living, environmental stage that is trophically acquired. As local (sedentary) sheep and goats rarely share pasture with ibex, have low endo-parasite burdens and are few in number, they are unlikely to transmit parasites to ibex. However, increasingly large local stock numbers may be contributing to pasture degradation which could cause nutritional stress and resource competition, exacerbating GIN impacts. We also find evidence for transhumance persisting, in spite of signs of pasture degradation that are seemingly affecting livestock productivity and potentially disease transmission. It is critical that proactive measures are taken, like participatory disease management with the Kinnauras, to align livelihoods with wildlife and rangeland conservation.

IntroductionSarcoptic mange, caused by Sarcoptes scabiei, is a disease with implications for wildlife conservation and management. Its severity depends on the host’s local skin immune response, which is largely unknown in Iberian ibex (Capra pyrenaica), a mountain ungulate dramatically affected by mange. In this species, the clinical outcome of sarcoptic mange varies among individuals, and the local immune response could be key to controlling the infestation. This study aims to characterize the local cellular immune response and its relationship with the clinical outcome.MethodsFourteen Iberian ibexes were experimentally infested with S. scabiei and six more served as controls. Clinical signs were monitored, and skin biopsies were collected from the withers at 26, 46, and 103 days post-infection (dpi). The presence and distribution of macrophages (including M1 and M2 phenotypes), T lymphocytes, B lymphocytes, plasma cells, and interleukine 10 were quantitatively evaluated using immunohistochemical techniques.ResultsAn inflammatory infiltrate that decreased significantly from 26 to 103 dpi was observed in all the infested ibexes. The predominant inflammatory cell population in the skin of the mangy ibexes was formed by macrophages (mainly the M2 phenotype) followed by T lymphocytes, with lower numbers of B lymphocytes and plasma cells. Three clinical courses were identified: total recovery, partial recovery, and terminal stage. The inflammatory infiltrates were less pronounced in the fully recovered ibexes than in those that progressed to the terminal stage throughout the study.DiscussionThe results suggest an exacerbated but effective Th1-type cellular immune response controlling mange in Iberian ibex. Furthermore, the local immune response appears to determine the variability of the clinical responses to S. scabiei infestation in this species. This first report on the progression of local skin immune cells is relevant not only for individuals but also for population management and conservation.

Copyright of Gozdarski Vestnik is the property of Federation of Forestry Associations of Slovenia and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)

Understanding how evolutionary pressures related to climate change have shaped the current genetic background of domestic animals is a fundamental pursuit of biology. Here, we generated wholegenome sequencing data from native goat populations in Iraq and Pakistan. Combined with previously published data on modern, ancient (Late Neolithic to Medieval periods), and wild Capra species worldwide, we explored the genetic population structure, ancestry components, and signatures of natural positive selection in native goat populations in Southwest Asia (SWA). Results revealed that the genetic structure of SWA goats was deeply influenced by gene flow from the eastern Mediterranean during the Chalcolithic period, which may reflect adaptation to gradual warming and aridity in the region. Furthermore, comparative genomic analysis revealed adaptive introgression of theKITLG locus from the Nubian ibex (C. nubiana) into African and SWA goats. The frequency of the selected allele at this locus was significantly higher among goat populations located near northeastern Africa. These results provide new insights into the genetic composition and history of goat populations in the SWA region. [ABSTRACT FROM AUTHOR]

Rangelands are increasingly being affected by climatic variations, fragmentation and changes in livestock management practices. Along with resource competition between livestock and wildlife, disease transmission has implications for people and wildlife in these shared landscapes. We worked with two pastoral communities in the Western Indian Himalayas: the migratory Kinnauras that travel to the Trans-Himalayan Pin valley in summer and the resident herders of Pin Valley. Asiatic ibex (Capra sibirica) is the predominant wild herbivore in Pin. The pastures in Pin are grazed by both livestock (migratory and resident) and ibex, with the potential for disease transmission. We investigate the effects of herding practices on livestock health and disease transmission, while focusing on gastro-intestinal nematodes (GINs) as they can spread by sharing pasture between wild and domestic ungulates. Surveys were carried out between June and August 2019, the period when migratory Kinnauras, local herders and Asiatic Ibex are found in Pin Valley. We found that the Kinnaura flocks share pasture with ibex during their time in Pin, exhibiting significantly higher endo-parasite burdens than sedentary livestock, and the Kinnaura flocks are increasing in number. This suggests GIN cross-transmission is possible, as GINs have low host specificity and a free-living, environmental stage that is trophically acquired. As local (sedentary) sheep and goats rarely share pasture with ibex, have low endo-parasite burdens and are few in number, they are unlikely to transmit parasites to ibex. However, increasingly large local stock numbers may be contributing to pasture degradation which could cause nutritional stress and resource competition, exacerbating GIN impacts. We also find evidence for transhumance persisting, in spite of signs of pasture degradation that are seemingly affecting livestock productivity and potentially disease transmission. It is critical that proactive measures are taken, like participatory disease management with the Kinnauras, to align livelihoods with wildlife and rangeland conservation. [ABSTRACT FROM AUTHOR]

Cultures using mind-altering psychedelic mushrooms in literate periods have been identified in the ancient Near East. key to their recognition in preliterate periods. One may assume that psychedelic substances such as mushrooms were elevated to the status of gods, and their secret identity embedded in the iconography of material items in a variety of media. I trace some of these images from late Holocene cultures until at least the Early Bronze Age, and suggest analogies from known contemporary cultures where the mycological cult was practiced. I note the presence of such a cult in the rock art of the Negev and Sinai deserts in Israel. Most of this art is thought to date within the last 5000 years. I also suggest a symbiotic relationship between man and ibex with the growth and collection of mushrooms linking the two. [ABSTRACT FROM AUTHOR]

The present study was designed with the aim to study morphometric characterization as well as phylogeny and diversity of the local Surguli goat at their breeding tract district Kohat through mitochondrial DNA region, i.e., Cytochrome C Oxidase Subunit One (CO1) gene. Morphometric data and blood samples were collected from thirty (30) pure goats. Morphometric analysis showed that sex had significant effect ( p  < 0.05) on body weight, body length, hearth girth and horn length while no significant effect ( p  > 0.05) was observed for other characteristics. The results also indicated that age had significant effect ( p  < 0.05) on height at rump, ear length, horn length and tail length while no significant effect ( p  > 0.05) was observed for other characteristics. The phylogenetic analysis through CO1 nucleotide sequences within nucleotide range 1-767 showed nine polymorphic sites segregating into eight haplotypes. The mean intraspecific diversity and mean interspecific diversity were calculated as 0.23 and 2.36%, respectively. Phylogenetic tree revealed that Capra Ibex and native Surguli goat have common ancestors. The morphometric and molecular results obtained from the present study can be exploited as a selection tool for breeding and overall improvement.

Abstract Iberian wild goats (Capra pyrenaica, also known as Iberian ibex, Spanish ibex, and Spanish wild goat) underwent strong genetic bottlenecks during the 19th and 20th centuries due to overhunting and habitat destruction. From the 1970s to 1990s, augmentation translocations were frequently carried out to restock Iberian wild goat populations (very often with hunting purposes), but they were not systematically planned or recorded. On the other hand, recent data suggest the occurrence of hybridization events between Iberian wild goats and domestic goats (Capra hircus). Augmentation translocations and interspecific hybridization might have contributed to increase the diversity of Iberian wild goats. With the aim of investigating this issue, we have genotyped 118 Iberian wild goats from Tortosa‐Beceite, Sierra Nevada, Muela de Cortes, Gredos, Batuecas, and Ordesa and Monte Perdido by using the Goat SNP50 BeadChip (Illumina). The analysis of genotypic data indicated that Iberian wild goat populations are strongly differentiated and display low diversity. Only three Iberian wild goats out from 118 show genomic signatures of mixed ancestry, a result consistent with a scenario in which past augmentation translocations have had a limited impact on the diversity of Iberian wild goats. Besides, we have detected eight Iberian wild goats from Tortosa‐Beceite with signs of domestic goat introgression. Although rare, hybridization with domestic goats could become a potential threat to the genetic integrity of Iberian wild goats; hence, measures should be taken to avoid the presence of uncontrolled herds of domestic or feral goats in mountainous areas inhabited by this iconic wild ungulate.

Mountain ungulates perform a key role in maintaining the balance of ecosystems as they are the primary consumers of vegetation and prey for large predators. The mountain ranges of northern Pakistan are home to six species of mountain ungulates, and the Himalayan ibex (Capra sibirica), hereafter ibex, is the most abundant among them. This study was conducted in three administrative regions of northern Pakistan, viz. Gilgit-Baltistan (GB), Azad Jammu and Kashmir (AJK), and Khyber Pakhtunkhwa (KP), to generate a range-wide density pattern map of ibex. A double-observer survey was conducted in 25 study sites during 2018–2021 across the ibex distribution range, covering an area of about 35,307 km2, by walking transects totaling 1647 km. Within the ibex range where the survey was not conducted due to financial and logistical constraints, we obtained species population information from local wildlife departments’ most recent annual survey data. The aim was to generate a density map for the entire ibex range. Using the BBRecapture package in program R, we estimated an ibex population of 7639 (95 % CI) with a mean density of 0.21/km2 in the surveyed area. Combining with the secondary data from un-surveyed areas, the total population estimate for the country came to 10,242 ibex. The largest population densities were observed in four valleys (Shimshal, Gulkin-Hussaini, Khyber, and Khunjerab) of the Karakoram-Pamir range, followed by the Hindu Kush range (Chitral Wildlife Division [WD]). The central and eastern parts of the Karakoram range had moderate to low densities, while the Himalayan range (e.g., Astore Valley) supported a small population. The mean herd size was 15 individuals (range: 5–41), and the average detection probability of observers A and B was 0.69 and 0.48, respectively. The average male and young ratios per 100 females were estimated to be 75 and 81, respectively. The range-wide density map developed during the study provided an evidence for the impact of trophy hunting programs and an objective tool for range-wide conservation planning of the species.

Pleistocene glaciations had profound impact on the spatial distribution and genetic makeup of species in temperate ecosystems. While the glacial period trapped several species into glacial refugia and caused abrupt decline in large populations, the interglacial period facilitated population growth and range expansion leading to allopatric speciation. Here, we analyzed 40 genomes of four species of ibex and found that Himalayan ibex in the Pamir Mountains evolved independently after splitting from its main range about 0.1 mya following the Pleistocene species pump concept. Demographic trajectories showed Himalayan ibex experienced two historic bottlenecks, one each c. 0.8–0.5 mya and c. 50–30 kya, with an intermediate large population expansion c. 0.2–0.16 mya coinciding with Mid-Pleistocene Transitions. We substantiate with multi-dimensional evidence that Himalayan ibex is an evolutionary distinct phylogenetic species of Siberian ibex which need to be prioritized as Capra himalayensis for taxonomic revision and conservation planning at a regional and global scale.