1,419,219 results on '"*CARCINOGENESIS"'
Search Results
2. The prominent pervasive oncogenic role and tissue specific permissiveness of RAS gene mutations.
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Yi, Ming, Soppet, Daniel, McCormick, Frank, and Nissley, Dwight
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Humans ,Mutation ,Organ Specificity ,Neoplasms ,Genes ,ras ,Proto-Oncogene Proteins p21(ras) ,Membrane Proteins ,GTP Phosphohydrolases ,Cell Line ,Tumor ,Carcinogenesis ,Oncogenes - Abstract
In cancer research, RAS biology has been focused on only a handful of tumor types. While RAS genes have long been suspected as common contributors to a wide spectrum of cancer types, robust evidence is required to firmly establish their critical oncogenic significance. We present a data mining study using DepMap genome-wide CRISPR screening data, which provide substantial evidence to support the prominent pervasive oncogenic role and tissue-specific permissiveness of RAS gene mutations. Differential analysis of CRISPR effect scores identifies K- or N-RAS genes as the most differential gene in contrasts of (K-, N-, combined) RAS mutant versus wild-type cell lines across multiple tissue types. The distinguished tissue-specific pattern of KRAS vs. NRAS as top differential genes in subsets of tissue types and evidence from genome data supported the idea of KRAS- and NRAS-engaged tissue types. To our knowledge, this is the first report of prominent pervasive oncogenic role of RAS mutations revealed by gene dependency data that is beyond the current understanding of the oncogenic role of RAS genes and their well-known involved tissue types. Our findings strongly support RAS mutations as primary oncogenic drivers beyond traditionally recognized cancer types and offer insights into their tissue-specific permissiveness.
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- 2024
3. AAPM task group report 135.B: Quality assurance for robotic radiosurgery
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Wang, Lei, Descovich, Martina, Wilcox, Ellen E, Yang, Jun, Cohen, Alan B, Fuerweger, Christoph, Prabhu, Anand, Garrett, Jeffrey A, Taylor, David D, Noll, Matt, and Dieterich, Sonja
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Medical and Biological Physics ,Physical Sciences ,Quality Education ,image guided SBRT ,image guided SRS ,robotic radio‐surgery ,Other Physical Sciences ,Biomedical Engineering ,Oncology and Carcinogenesis ,Nuclear Medicine & Medical Imaging ,Biomedical engineering ,Medical and biological physics - Abstract
AAPM Task Group Report 135.B covers new technology components that have been added to an established radiosurgery platform and updates the components that were not well covered in the previous report. Considering the current state of the platform, this task group (TG) is a combination of a foundational task group to establish the basis for new processes/technology and an educational task group updating guidelines on the established components of the platform. Because the technology discussed in this document has a relatively small user base compared to C-arm isocentric linacs, the authors chose to emphasize the educational components to assist medical physicists who are new to the technology and have not had the opportunity to receive in-depth vendor training at the time of reading this report. The TG has developed codes of practice, introduced QA, and developed guidelines which are generally expected to become enduring practice. This report makes prescriptive recommendations as there has not been enough longitudinal experience with some of the new technical components to develop a data-based risk analysis.
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- 2024
4. Functional inversion of circadian regulator REV-ERBα leads to tumorigenic gene reprogramming
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Yang, Yatian, Zhang, Xiong, Cai, Demin, Zheng, Xingling, Zhao, Xuan, Zou, June X, Zhang, Jin, Borowsky, Alexander D, Dall’Era, Marc A, Corey, Eva, Mitsiades, Nicholas, Kung, Hsing-Jien, Chen, Xinbin, Li, Jian Jian, Downes, Michael, Evans, Ronald M, and Chen, Hong-Wu
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Biological Sciences ,Genetics ,Cancer ,Human Genome ,1.1 Normal biological development and functioning ,2.1 Biological and endogenous factors ,Nuclear Receptor Subfamily 1 ,Group D ,Member 1 ,Humans ,Animals ,Circadian Rhythm ,Carcinogenesis ,Mice ,Gene Expression Regulation ,Neoplastic ,Transcription Factors ,Hepatocyte Nuclear Factor 3-alpha ,Signal Transduction ,Cell Line ,Tumor ,Neoplasms ,Cell Cycle Proteins ,Nuclear Receptor Co-Repressor 1 ,Bromodomain Containing Proteins ,CRPC ,REV-ERBα ,antagonist ,liver ,prostate - Abstract
Profound functional switch of key regulatory factors may play a major role in homeostasis and disease. Dysregulation of circadian rhythm (CR) is strongly implicated in cancer with mechanisms poorly understood. We report here that the function of REV-ERBα, a major CR regulator of the orphan nuclear receptor subfamily, is dramatically altered in tumors in both its genome binding and functional mode. Loss of CR is linked to a functional inversion of REV-ERBα from a repressor in control of CR and metabolic gene programs in normal tissues to a strong activator in different cancers. Through changing its association from NCoR/HDAC3 corepressor complex to BRD4/p300 coactivators, REV-ERBα directly activates thousands of genes including tumorigenic programs such as MAPK and PI3K-Akt signaling. Functioning as a master transcriptional activator, REV-ERBα partners with pioneer factor FOXA1 and directly stimulates a large number of signaling genes, including multiple growth factors, receptor tyrosine kinases, RASs, AKTs, and MAPKs. Moreover, elevated REV-ERBα reprograms FOXA1 to bind new targets through a BRD4-mediated increase in local chromatin accessibility. Pharmacological targeting with SR8278 diminishes the function of both REV-ERBα and FOXA1 and synergizes with BRD4 inhibitor in effective suppression of tumorigenic programs and tumor growth. Thus, our study revealed a functional inversion by a CR regulator in driving gene reprogramming as an unexpected paradigm of tumorigenesis mechanism and demonstrated a high effectiveness of therapeutic targeting such switch.
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- 2024
5. 8265 Premature Ovarian Insufficiency in Pediatric Cancer Patients: a 10-Year Rady Children's Hospital Experience
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Robinson, Miranda, Meller, Leo, and Patterson, Mary Elizabeth
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Reproductive Medicine ,Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Pediatric Cancer ,Minority Health ,Contraception/Reproduction ,Clinical Trials and Supportive Activities ,Health Disparities ,Rare Diseases ,Pediatric ,Clinical Research ,Hematology ,Cancer ,Rehabilitation ,6.1 Pharmaceuticals ,Cardiovascular medicine and haematology - Abstract
Abstract: Disclosure: M. Robinson: None. L. Meller: None. M.E. Patterson: None. Objective: To highlight the occurrence of premature ovarian insufficiency in cancer patients treated at a children’s hospital and to determine which patient characteristics or treatment modalities are associated with ovarian failure and subsequent recovery of ovarian function. Study design: A retrospective chart review. Setting: Rady Children’s Hospital San Diego. Subjects and Methods: Between August 2011 and August 2021, the cases of 36 patients with cancer and ovarian failure were reviewed. Data collected included type of cancer, age at diagnosis, types of chemotherapy used in treatment, whether a bone marrow transplant or radiation was part of the treatment plan, peak FSH value and age when this occurred, peak AMH value, whether GnRHa treatment was used, type of hormone replacement therapy used, and whether there was recovery of ovarian function. Results: The most common type of cancer identified in this group of patients was acute lymphoblastic leukemia (ALL) (13, 36.1%). The mean age of diagnosis was 8.5 ± 4.3 years and the mean age of peak FSH value was 12.6 ± 2.8 years. Nearly all patients (97.2%) were treated with alkylating agents as part of their chemotherapy regimen and 72.2% received some form of radiation. Most patients (26, 72.2%) also received some form of hormone therapy, most commonly transdermal hormone therapy (13, 36.1%) or oral contraceptive pill (10, 27.8%), and 15.8% of patients were treated with the GnRHa Lupron. Fertility planning was offered or discussed in 36.1% of patients. Ten patients (27.8%) were noted to have some degree of recovery in their ovarian function. Age at diagnosis and type of cancer treatment were significant predictors of recovery in multivariate regression modeling. Specifically, each year older in age was associated with a 30% decrease in odds of recovery (OR: 0.7, CI: 0.5-0.95, P = 0.035), and treatment with an alkylating agent without transplant was associated with a 3-fold increase in odds of recovery (OR: 3, CI:2.7-564, P = 0.007). Conclusion: This retrospective review demonstrates that, while uncommon, POI can occur in pediatric cancer survivors, emphasizing the importance of educating patients on the potential long-term effects of cancer treatment and routine surveillance for these complications. This study also confirmed that recovery of ovarian function is possible in these patients, especially when diagnosed at a younger age, so continued monitoring is essential. Presentation: 6/3/2024
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- 2024
6. Bedside implications of the use of surrogate endpoints in solid and haematological cancers: implications for our reliance on PFS, DFS, ORR, MRD and more
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Olivier, Timothée, Haslam, Alyson, Ochoa, Dagney, Fernandez, Eduardo, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Clinical Research ,4.1 Discovery and preclinical testing of markers and technologies ,Good Health and Well Being - Abstract
Clinical endpoints, such as overall survival, directly measure relevant outcomes. Surrogate endpoints, in contrast, are intermediate, stand-in measures of various tumour-related metrics and include tumour growth, tumour shrinkage, blood results, etc. Surrogates may be a time point measurement, that is, tumour shrinkage at some point (eg, response rate) or biomarker-assessed disease status, measured at given time points (eg, circulating tumour DNA, ctDNA). They can also be measured over time, as with progression-free survival, which is the time until a patient presents with either disease progression or death. Surrogates are increasingly used in trials supporting the marketing authorisation of novel oncology drugs. Yet, the trial-level correlation between surrogates and clinical endpoints—meaning to which extent an improvement in the surrogate predicts an improvement in the direct endpoint—is often moderate to low. Here, we provide a comprehensive classification of surrogate endpoints: time point measurements and time-to-event endpoints in solid and haematological malignancies. Also, we discuss an overlooked aspect of the use of surrogates: the limitations of surrogates outside trial settings, at the bedside. Surrogates can result in the inappropriate stopping or switching of therapy. Surrogates can be used to usher in new strategies (eg, ctDNA in adjuvant treatment of colon cancer), which may erode patient outcomes. In liquid malignancies, surrogates can mislead us to use novel drugs and replace proven standards of care with costly medications. Surrogates can lead one to intensify treatment without clear improvement and possibly worsening quality of life. Clinicians should be aware of the role of surrogates in the development and regulation of drugs and how their use can carry real-world, bedside implications.
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- 2024
7. A novel framework to assess haematology and oncology registration trials: The THEOREMM project
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Olivier, Timothée, Haslam, Alyson, Burke, Patricia, Boutron, Isabelle, Naudet, Florian, Ioannidis, John PA, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Clinical Research ,Clinical Trials and Supportive Activities ,8.4 Research design and methodologies (health services) ,Good Health and Well Being ,Humans ,Medical Oncology ,Hematology ,Clinical Trials as Topic ,Research Design ,Randomized Controlled Trials as Topic ,Neoplasms ,appraisal ,framework ,haematology ,metaresearch ,oncology ,trials ,Clinical Sciences ,General Clinical Medicine ,Cardiovascular medicine and haematology ,Clinical sciences - Abstract
BackgroundMethodological limitations affect a significant number of oncology and haematology trials, raising concerns about the applicability of their results. For example, a suboptimal control arm or limited access to best care upon progression may skew the trial results toward a benefit in the experimental arm. Beyond the fact that such limitations do not prevent drugs reaching the market, other assessment tools, such as those developed by professional societies-ESMO-MCBS and ASCO Value Framework-do not integrate these important shortcomings.MethodsWe propose creating a novel framework with the scope of assessing registration cancer clinical trials in haematology and oncology (randomized or single arm)-that is trials leading to a marketing authorization. The main steps of the methods are (1) assembling a scientific board; (2) defining the scope, goal and methods through pre-specified, pre-registered and protocolized methodology; (3) preregistration of the protocol; (4) conducting a scoping review of limitations and biases affecting oncology trials and assessing existing scores or methods; (5) developing a list of features to be included and assessed within the framework; (6) assessing each feature through a questionnaire sent to highly cited haematologists and oncologists involved in clinical trials; and (7) finalizing the first version of framework.ResultsNot applicable.ConclusionsOur proposal emerged in response to the lack of consideration for key limitations in current trial assessments. The goal is to create a framework specifically designed to assess single trials leading to marketing authorization in the field of oncology and haematogy.
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- 2024
8. Mapping spatial organization and genetic cell-state regulators to target immune evasion in ovarian cancer
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Yeh, Christine Yiwen, Aguirre, Karmen, Laveroni, Olivia, Kim, Subin, Wang, Aihui, Liang, Brooke, Zhang, Xiaoming, Han, Lucy M, Valbuena, Raeline, Bassik, Michael C, Kim, Young-Min, Plevritis, Sylvia K, Snyder, Michael P, Howitt, Brooke E, and Jerby, Livnat
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Cancer ,Human Genome ,Immunotherapy ,Rare Diseases ,Genetics ,Ovarian Cancer ,Women's Health ,2.1 Biological and endogenous factors ,5.1 Pharmaceuticals ,Female ,Humans ,Ovarian Neoplasms ,Tumor Escape ,Killer Cells ,Natural ,Single-Cell Analysis ,Cell Line ,Tumor ,T-Lymphocytes ,Gene Expression Regulation ,Neoplastic ,Tumor Microenvironment ,Immune Evasion ,Lymphocytes ,Tumor-Infiltrating ,Biochemistry and cell biology - Abstract
The drivers of immune evasion are not entirely clear, limiting the success of cancer immunotherapies. Here we applied single-cell spatial and perturbational transcriptomics to delineate immune evasion in high-grade serous tubo-ovarian cancer. To this end, we first mapped the spatial organization of high-grade serous tubo-ovarian cancer by profiling more than 2.5 million cells in situ in 130 tumors from 94 patients. This revealed a malignant cell state that reflects tumor genetics and is predictive of T cell and natural killer cell infiltration levels and response to immune checkpoint blockade. We then performed Perturb-seq screens and identified genetic perturbations-including knockout of PTPN1 and ACTR8-that trigger this malignant cell state. Finally, we show that these perturbations, as well as a PTPN1/PTPN2 inhibitor, sensitize ovarian cancer cells to T cell and natural killer cell cytotoxicity, as predicted. This study thus identifies ways to study and target immune evasion by linking genetic variation, cell-state regulators and spatial biology.
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- 2024
9. Fruits and vegetables intake and bladder cancer risk: a pooled analysis from 11 case–control studies in the BLadder cancer Epidemiology and Nutritional Determinants (BLEND) consortium
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Boot, Iris WA, Wesselius, Anke, Jochems, Sylvia HJ, Yu, Evan YW, Bosetti, Cristina, Taborelli, Martina, Porru, Stefano, Carta, Angela, Golka, Klaus, Jiang, Xuejuan, Stern, Mariana C, Kellen, Eliane, Pohlabeln, Hermann, Tang, Li, Karagas, Margaret R, Zhang, Zuo-Feng, Taylor, Jack A, La Vecchia, Carlo, and Zeegers, Maurice P
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Biomedical and Clinical Sciences ,Health Sciences ,Oncology and Carcinogenesis ,Prevention ,Cancer ,Urologic Diseases ,Clinical Research ,Nutrition ,Humans ,Vegetables ,Fruit ,Urinary Bladder Neoplasms ,Case-Control Studies ,Diet ,Risk Factors ,Female ,Male ,Middle Aged ,Odds Ratio ,Aged ,Bladder cancer ,Nutritional oncology ,Pooled case control study ,Fruits ,Nutrition and Dietetics ,Nutrition & Dietetics ,Nutrition and dietetics ,Epidemiology - Abstract
PurposeHigh consumption of fruits and vegetables decrease the risk of bladder cancer (BC). The evidence of specific fruits and vegetables and the BC risk is still limited.MethodsFruit and vegetable consumptions in relation to BC risk was examined by pooling individual participant data from case-control studies. Unconditional logistic regression was used to estimate study-specific odds ratio's (ORs) with 95% confidence intervals (CIs) and combined using a random-effects model for intakes of total fruits, total vegetables, and subgroups of fruits and vegetables.ResultsA total of 11 case-control studies were included, comprising 5637 BC cases and 10,504 controls. Overall, participants with the highest intakes versus the lowest intakes of fruits in total (OR 0.79; 95% CI 0.68-0.91), citrus fruits (OR 0.81; 95% CI 0.65-0.98), pome fruits (OR 0.76; 95% CI 0.65-0.87), and tropical fruits (OR 0.84; 95% CI 0.73-0.94) reduced the BC risk. Greater consumption of vegetables in total, and specifically shoot vegetables, was associated with decreased BC risk (OR 0.82; 95% CI 0.68-0.96 and OR 0.87; 95% CI 0.78-0.96, respectively). Substantial heterogeneity was observed for the associations between citrus fruits and total vegetables and BC risk.ConclusionThis comprehensive study provides compelling evidence that the consumption of fruits overall, citrus fruits, pome fruits and tropical fruits reduce the BC risk. Besides, evidence was found for an inverse association between total vegetables and shoot vegetables intake.
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- 2024
10. Anti-RGS8 paraneoplastic cerebellar ataxia is preferentially associated with a particular subtype of Hodgkin’s lymphoma
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Peter, Elise, Ciano-Petersen, Nicolas Lundahl, Do, Le-Duy, Perrot, Jimmy, Ngo, Thomas, Pluvinage, John, Bartley, Christopher M, Zorn, Kelsey C, Miske, Ramona, Scharf, Madeleine, Villagrán-García, Macarena, Farina, Antonio, Rogemond, Véronique, Antoine, Jean-Christophe, Tranchant, Christine, Dubois, Valérie, DeRisi, Joseph L, Pleasure, Samuel J, Wilson, Michael R, Gelfand, Jeffrey M, Traverse-Glehen, Alexandra, Honnorat, Jérôme, and Desestret, Virginie
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Biomedical and Clinical Sciences ,Cardiovascular Medicine and Haematology ,Oncology and Carcinogenesis ,Immunology ,Rare Diseases ,Neurosciences ,Cancer ,Orphan Drug ,Brain Disorders ,Lymphatic Research ,Hematology ,Autoimmune Disease ,Lymphoma ,2.1 Biological and endogenous factors ,Humans ,Male ,RGS Proteins ,Autoantibodies ,Hodgkin Disease ,Cerebellar Ataxia ,Middle Aged ,Female ,Retrospective Studies ,Aged ,Adult ,Paraneoplastic Syndromes ,Nervous System ,Anti-RGS8 antibodies ,Cerebellar ataxia ,Paraneoplastic neurological syndrome ,B-cell lymphoma ,Nodular lymphocyte-predominant Hodgkin lymphoma ,Onconeural antigen ,Clinical Sciences ,Neurology & Neurosurgery ,Clinical sciences - Abstract
Ataxia with anti-regulator of G-protein signaling 8 autoantibodies (RGS8-Abs) is an autoimmune disease recently described in four patients. The present study aimed to identify other patients with RGS8-Abs, describe their clinical features, including the link between RGS8-related autoimmune cerebellar ataxia (ACA) and cancer. Patients with RGS8-Abs were identified retrospectively in the biological collections of the French Reference Center for Paraneoplastic Neurological Syndrome and the University of California San Francisco Center for Encephalitis and Meningitis. Clinical data were collected, and cerebrospinal fluid, serum, and tumor pathological samples were retrieved to characterize the autoantibodies and the associated malignancies. Only three patients with RGS8-Abs were identified. All of them presented with a pure cerebellar ataxia of mild to severe course, unresponsive to current immunotherapy regimens for ACA. Two patients presented with a Hodgkin lymphoma of the rare specific subtype called nodular lymphocyte-predominant Hodgkin lymphoma, with very mild extension. Autoantibodies detected in all patients enriched the same epitope on the RGS8 protein, which is an intracellular protein physiologically expressed in Purkinje cells but also ectopically expressed specifically in lymphoma cells of patients with RGS8-related ACA. The present results and those of the four cases previously described suggest that RGS8-Abs define a new paraneoplastic neurological syndrome of extreme rarity found mostly in middle-aged males that associates pure cerebellar ataxia and a particular lymphoma specifically expressing the RGS8 antigen. As in other paraneoplastic ACA with intracellular antigen, the disease course is severe, and patients tend to exhibit a poor response to immune therapy.
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- 2024
11. Disparities in the Occurrence of Long-Term Effects of Bone Marrow Suppression after Treatment in Adolescent Young Adult Breast Cancer Survivors
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Bellini, A, Keegan, THM, Li, Q, Maguire, FB, Lyo, V, and Sauder, Candice
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Breast Cancer ,Sepsis ,Women's Health ,Pediatric ,Minority Health ,Rare Diseases ,Health Disparities ,Clinical Research ,Infectious Diseases ,Hematology ,Pediatric Cancer ,Humans ,Female ,Adolescent ,Young Adult ,Breast Neoplasms ,Adult ,Cancer Survivors ,Follow-Up Studies ,Prognosis ,Survival Rate ,Anemia ,Incidence ,California ,Bone Marrow Diseases ,Thrombocytopenia ,Breast cancer ,Adolescent and young adult ,Bone marrow suppression ,Race/ethnicity ,AYA breast cancer survivors ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundMany adolescent and young adult (AYA) patients with breast cancer (BC) receive adjuvant therapy as initial treatment, with long-term bone marrow suppression as a potential complication, but no studies have evaluated the impact of race/ethnicity on the development of bone marrow suppression in AYA BC survivors.Patients and methodsFemale patients ages 15-39 years diagnosed with BC (2006-2018) and surviving ≥ 2 years were identified from the California Cancer Registry and linked to statewide hospitalization data. We estimated the cumulative incidence of developing late effects of bone marrow suppression, such as leukopenia, anemia, thrombocytopenia, bleeding, and infection/sepsis, during hospital discharge diagnoses present ≥ 2 years after diagnosis. We examined the impact of sociodemographic and clinical factors on late effects using multivariate Cox proportional hazards regression.ResultsOf 11,293 patients, 42.8% were non-Hispanic (nH) White, 28.8% Hispanic, 19.5% nH Asian/Pacific Islander, and 7.5% nH Black. In multivariable analyses, nH Blacks had the highest risk (versus nH Whites) of anemia [hazard ratio (HR) 1.72, 95% confidence interval (CI) 1.47-2.02], leukopenia (HR 1.56, CI 1.14-2.13), thrombocytopenia (HR 1.46, CI 1.08-1.99), major infection/sepsis (HR 1.64, CI 1.4-1.92), and bleeding (HR 1.89, CI 1.39-2.58). Hispanics had a higher risk of developing anemia (HR 1.17, CI 1.04-1.32), bleeding (HR 1.4, CI 1.12-1.76), and major infections/sepsis (HR 1.36, CI 1.21-1.52). Asian/Pacific Islanders had only a higher risk of developing bleeding (HR 1.33, CI 1.03-1.72). Patients from a low neighborhood socioeconomic status had a 20% higher risk of infection/sepsis (HR 1.21, CI 1.1-1.34), but there were no associations for the other late effects.ConclusionsWe identified that AYAs of nH Black, Hispanic, and Asian/Pacific Islander race/ethnicity are at an increased risk of several late effects after adjuvant therapy compared with nH White patients. From these data, providers can implement early/frequent screening of hematologic late effects in these high-risk survivors.
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- 2024
12. Metric learning guided sinogram denoising for cone beam CT enhancement.
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Li, Haoran, Tsai, Yun-Han, Liu, Hengjie, and Ruan, Dan
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cone beam computed tomography ,deep learning ,metric learning ,Other Physical Sciences ,Biomedical Engineering ,Oncology and Carcinogenesis ,Nuclear Medicine & Medical Imaging ,Biomedical engineering ,Medical and biological physics - Abstract
Cone beam computed tomography (CBCT) is a widely available modality, but its clinical utility has been limited by low detail conspicuity and quantitative accuracy. Convenient post-reconstruction denoising is subject to back projected patterned residual, but joint denoise-reconstruction is typically computationally expensive and complex. In this study, we develop and evaluate a novel Metric-learning guided wavelet transform reconstruction (MEGATRON) approach to enhance image domain quality with projection-domain processing. Projection domain based processing has the benefit of being simple, efficient, and compatible with various reconstruction toolkit and vendor platforms. However, they also typically show inferior performance in the final reconstructed image, because the denoising goals in projection and image domains do not necessarily align. Motivated by these observations, this work aims to translate the demand for quality enhancement from the quantitative image domain to the more easily operable projection domain. Specifically, the proposed paradigm consists of a metric learning module and a denoising network module. Via metric learning, enhancement objectives on the wavelet encoded sinogram domain data are defined to reflect post-reconstruction image discrepancy. The denoising network maps measured cone-beam projection to its enhanced version, driven by the learnt objective. In doing so, the denoiser operates in the convenient sinogram to sinogram fashion but reflects improvement in reconstructed image as the final goal. Implementation-wise, metric learning was formalized as optimizing the weighted fitting of wavelet subbands, and a res-Unet, which is a Unet structure with residual blocks, was used for denoising. To access quantitative reference, cone-beam projections were simulated using the X-ray based Cancer Imaging Simulation Toolkit (XCIST). In both learning modules, a data set of 123 human thoraxes, which was from Open-Source Imaging Consortium (OSIC) Pulmonary Fibrosis Progression challenge, was used. Reconstructed CBCT thoracic images were compared against ground truth FB and performance was assessed in root mean square error (RMSE), peak signal-to-noise ratio (PSNR), and structural similarity index (SSIM). MEGATRON achieved RMSE in HU value, PSNR, and SSIM were 30.97 ± 4.25, 37.45 ± 1.78, and 93.23 ± 1.62, respectively. These values are on par with reported results from sophisticated physics-driven CBCT enhancement, demonstrating promise and utility of the proposed MEGATRON method. We have demonstrated that incorporating the proposed metric learning into sinogram denoising introduces awareness of reconstruction goal and improves final quantitative performance. The proposed approach is compatible with a wide range of denoiser network structures and reconstruction modules, to suit customized need or further improve performance.
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- 2024
13. Click chemistry-mediated enrichment of circulating tumor cells and tumor-derived extracellular vesicles for dual liquid biopsy in differentiated thyroid cancer
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Feng, Bing, Wang, Jing, Zhang, Ryan Y, Wei, Anna Yaxuan, Zhao, Chen, Yen, Ying-Tzu, Ji, You-Ren, Kim, Hyoyong, Ju, Yong, Smalley, Matthew, Zuo, Vivian Xufei, Cheng, Liwen, Phung, Aaron, Zhou, Ziang, Yu, Sitong, DiBernardo, Gabriella, Memarzadeh, Sanaz, Posadas, Edwin M, Chai-Ho, Wanxing, Agopian, Vatche, Lee, Junseok, Yeh, Michael W, Wu, James, Zheng, Guangjuan, Tseng, Hsian-Rong, and Zhu, Yazhen
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Clinical Research ,Good Health and Well Being ,Biomedical Engineering ,Nanotechnology ,Nanoscience & Nanotechnology ,Medical biotechnology ,Biomedical engineering - Abstract
Circulating tumor cells (CTCs) and tumor-derived extracellular vesicles (tEVs) are two crucial methodologies of liquid biopsy. Given their distinct size differences and release dynamics, CTCs and tEVs potentially offer synergistic capabilities in the non-invasive detection of differentiated thyroid cancer (DTC), a typically indolent tumor. We present the Combined DTC CTC/tEV Assay, integrating dual liquid biopsy processes: i) DTC CTC enrichment by Click Chips, followed by analysis of seven DTC-specific genes, and ii) DTC tEV enrichment by Click Beads, succeeded by mRNA cargo quantification in DTC tEVs. This method utilizes click chemistry, leveraging a pair of biorthogonal and highly reactive functional motifs (tetrazine, Tz, and trans-cyclooctene, TCO), to overcome the challenges encountered in the conventional immunoaffinity-based enrichment of CTCs and tEVs. The Combined DTC CTC/tEV Assay synergistically combines the diagnostic precision of CTCs with the sensitivity of tEVs, demonstrating superior diagnostic accuracy in DTC detection and boasting an AUROC of 0.99. This outperforms the individual diagnostic performance of using either DTC CTC or DTC tEV alone. This integration enables full utilization of a patient's blood sample, and marks a significant evolution in the development of nanomaterial-based liquid biopsy technologies to address challenging unmet clinical needs in cancer care.
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- 2024
14. Imatinib remains the best frontline therapy in patients with chronic myeloid leukemia: Critical analysis of the ASC4FIRST trial
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Srinivasan, Nethra, Olivier, Timothée, Haslam, Alyson, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Rare Diseases ,Cancer ,Hematology ,6.1 Pharmaceuticals ,Cardiorespiratory Medicine and Haematology ,Immunology ,Cardiovascular medicine and haematology - Published
- 2024
15. Super-enhancer profiling reveals ThPOK/ZBTB7B, a CD4+ cell lineage commitment factor, as a master regulator that restricts breast cancer cells to a luminal non-migratory phenotype
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Arcuschin, Camila D, Kahrizi, Kamin, Sayaman, Rosalyn W, DiBenedetto, Carolina, Shen, Yizhuo, Salaberry, Pedro J, Zakroui, Ons, Schwarzer, Cecilia, Scapozza, Alessandro, Betancur, Paola, Saba, Julie D, Coppé, Jean-Philippe, Barcellos-Hoff, Mary-Helen, Kappes, Dietmar, van ‘t Veer, Laura, Schor, Ignacio E, and Muñoz, Denise P
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Biological Sciences ,Women's Health ,Cancer Genomics ,Human Genome ,Genetics ,Cancer ,Breast Cancer ,2.1 Biological and endogenous factors - Abstract
Despite efforts to understand breast cancer biology, metastatic disease remains a clinical challenge. Identifying suppressors of breast cancer progression and mechanisms of transition to more invasive phenotypes could provide game changing therapeutic opportunities. Transcriptional deregulation is central to all malignancies, highlighted by the extensive reprogramming of regulatory elements that underlie oncogenic programs. Among these, super-enhancers (SEs) stand out due to their enrichment in genes controlling cancer hallmarks. To reveal novel breast cancer dependencies, we integrated the analysis of the SE landscape with master regulator activity inference for a series of breast cancer cell lines. As a result, we identified T - h elper-inducing Poxviruses and Zinc-finger ( PO Z)/ K rüppel-like factor (ThPOK, ZBTB7B ), a CD4 + cell lineage commitment factor, as a breast cancer master regulator that is recurrently associated with a SE. ThPOK expression is highest in luminal breast cancer but is significantly reduced in the basal subtype. Manipulation of ThPOK levels in cell lines shows that its repressive function restricts breast cancer cells to an epithelial phenotype by suppressing the expression of genes involved in the epithelial-mesenchymal transition (EMT), WNT/β-catenin target genes, and the pro-metastatic TGFβ pathway. Our study reveals ThPOK as a master transcription factor that restricts the acquisition of metastatic features in breast cancer cells.
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- 2024
16. PARP7 Inhibitors and AHR Agonists Act Synergistically Across a Wide-Range of Cancer Models.
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Chen, Huadong, Gou, Xuxu, Mao, Ying, O'Leary, Patrick C, Diolaiti, Morgan E, and Ashworth, Alan
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Women's Health ,Estrogen ,Urologic Diseases ,Breast Cancer ,Prostate Cancer ,Genetics ,Cancer ,5.1 Pharmaceuticals ,6.1 Pharmaceuticals ,2.1 Biological and endogenous factors ,Pharmacology and Pharmaceutical Sciences ,Oncology & Carcinogenesis ,Biochemistry and cell biology ,Oncology and carcinogenesis - Abstract
Small molecule inhibitors of the mono (ADP) ribosyl transferase PARP7 are being evaluated as a monotherapy for tumors overexpressing PARP7 and in combination with immune checkpoint blockade. We previously showed that sensitivity to the PARP7 inhibitor (PARP7i) RBN-2397 could be enhanced by co-treatment with agonists of the Aryl Hydrocarbon Receptor (AHRa) in cell lines that show strong intrinsic sensitivity to RBN-2397. Here we demonstrate that a range of tumor cell lines that are relatively insensitive to PARP7i or AHRa as individual agents are unexpectedly profoundly sensitive to the combination. Our data show that this synergistic response is dependent on AHR/ARNT and is associated with increased levels of nuclear AHR and increased transcription of AHR target genes. In some hormone receptor-positive cell lines, we find that combination treatment is associated with proteasomal turnover of the steroid hormone receptors, androgen receptor and estrogen receptor. Both wildtype and hormone-resistant mutant forms of these receptors are degraded upon treatment with AHRa and PARP7i in breast and prostate cancer models. These results suggest that combining PARP7i with AHRa may extend the utility of these drugs to a wider range of tumors, including those that are refractory to hormone therapy.
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- 2024
17. Defining metabolic flexibility in hair follicle stem cell induced squamous cell carcinoma.
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Galvan, Carlos, Flores, Aimee, Cerrilos, Victoria, Avila, Itzetl, Murphy, Conor, Zheng, Wilson, Christofk, Heather, and Lowry, William
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Carcinoma ,Squamous Cell ,Animals ,Hair Follicle ,Glutaminase ,Mice ,Glycolysis ,Skin Neoplasms ,Stem Cells ,Glutamine ,Humans ,Cell Transformation ,Neoplastic ,Carcinogenesis - Abstract
We previously showed that inhibition of glycolysis in cutaneous squamous cell carcinoma (SCC)-initiating cells had no effect on tumorigenesis, despite the perceived requirement of the Warburg effect, which was thought to drive carcinogenesis. Instead, these SCCs were metabolically flexible and sustained growth through glutaminolysis, another metabolic process frequently implicated to fuel tumorigenesis in various cancers. Here, we focused on glutaminolysis and genetically blocked this process through glutaminase (GLS) deletion in SCC cells of origin. Genetic deletion of GLS had little effect on tumorigenesis due to the up-regulated lactate consumption and utilization for the TCA cycle, providing further evidence of metabolic flexibility. We went on to show that posttranscriptional regulation of nutrient transporters appears to mediate metabolic flexibility in this SCC model. To define the limits of this flexibility, we genetically blocked both glycolysis and glutaminolysis simultaneously and found the abrogation of both of these carbon utilization pathways was enough to prevent both papilloma and frank carcinoma.
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- 2024
18. Immune checkpoint inhibitor-induced gastrointestinal injury: prevalence of cytomegalovirus, adenovirus and Epstein-Barr virus
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Chornenkyy, Yevgen, LaBoy, Carissa, De Hoyos, Sergei Xavier, Hu, Jingjing, and Pezhouh, Maryam
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Biomedical and Clinical Sciences ,Clinical Sciences ,Immunology ,Autoimmune Disease ,Cancer ,Infectious Diseases ,Clinical Research ,Colo-Rectal Cancer ,Immunotherapy ,Digestive Diseases ,2.1 Biological and endogenous factors ,2.2 Factors relating to the physical environment ,Infection ,COLITIS ,Cytomegalovirus ,Gastrointestinal Diseases ,Viruses ,Epstein-Barr Virus Infections ,Medical Microbiology ,Pathology ,Clinical sciences ,Oncology and carcinogenesis - Abstract
AimsWidespread use of immune checkpoint inhibitors (ICIs) for treatment of advanced malignancies led to an increase in number of immune-related adverse events such as ICI gastrointestinal (GI) injury (ICIGI). The resulting immune dysregulation of the GI mucosa is believed to predispose patients to viral infections. We characterised the histopathological features of ICIGI and the frequency of viral infections such as cytomegalovirus (CMV), adenovirus, and Epstein-Barr virus (EBV).MethodsSingle-centre retrospective study (2011-2020).Results81 GI biopsies from 31 patients with ICIGI (65% male (20/31), 35% female (11/31)) with advanced malignancies were reviewed. Most patients received ipilimumab and nivolumab (14/31, 45%), followed by pembrolizumab (9/31, 29%), ipilimumab (4/31, 13%), nivolumab (2/31, 6%) and combination of all three medications (2/31, 6%). Average regimen prior to incidence of diarrhea was three cycles. Evidence of colitis or erythema by endoscopy was present in 77% of cases, while 23% showed normal endoscopy. Histologically, the predominant ICIGI findings were active inflammation (84%), including cryptitis (77%), crypt abscesses (65%), lymphocytic colitis-like (LCL) pattern (61%), increase in epithelial apoptosis (74%) and/or surface injury (81%). Only one case showed diffuse CMV positivity (3%) with characteristic CMV viral cytopathic effects present on H&E stain and four cases were positive for rare EBV (13%). Adenovirus infection was not identified.ConclusionWhile our cohort is small, ICIGI generally demonstrates active inflammation including cryptitis and crypt abscesses in the colon, LCL pattern, and an increase in epithelial apoptosis. Upfront immunohistochemistry for viral infection without high-degree of clinical and histologic suspicion is not recommended.
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- 2024
19. A pragmatic randomized trial of mailed fecal immunochemical testing to increase colorectal cancer screening among low‐income and minoritized populations
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Martínez, María Elena, Roesch, Scott, Largaespada, Valesca, Castañeda, Sheila F, Nodora, Jesse N, Rabin, Borsika A, Covin, Jennifer, Ortwine, Kristine, Preciado‐Hidalgo, Yesenia, Howard, Nicole, Schultz, James, Stamm, Nannette, Ramirez, Daniel, Halpern, Michael T, and Gupta, Samir
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Biomedical and Clinical Sciences ,Health Services and Systems ,Public Health ,Health Sciences ,Clinical Sciences ,Emerging Infectious Diseases ,Colo-Rectal Cancer ,Social Determinants of Health ,Minority Health ,Cancer ,Aging ,Health Disparities ,Comparative Effectiveness Research ,Clinical Trials and Supportive Activities ,Infectious Diseases ,Clinical Research ,Prevention ,Women's Health ,Digestive Diseases ,Health Services ,4.4 Population screening ,Good Health and Well Being ,Aged ,Female ,Humans ,Male ,Middle Aged ,Colorectal Neoplasms ,COVID-19 ,Early Detection of Cancer ,Feces ,Hispanic or Latino ,Occult Blood ,Poverty ,Health Services Accessibility ,Healthcare Disparities ,colorectal cancer screening ,community health centers ,disparities ,fecal immunochemical test ,minoritized populations ,Oncology and Carcinogenesis ,Public Health and Health Services ,Oncology & Carcinogenesis ,Oncology and carcinogenesis ,Public health - Abstract
BackgroundColorectal cancer (CRC) screening is underused, particularly among low-income and minoritized populations, for whom the coronavirus disease 2019 (COVID-19) pandemic has challenged progress in achieving equity.MethodsA hub-and-spoke model was used. The hub was a nonacademic organization and the spokes were three community health center (CHC) systems overseeing numerous clinic sites. Via a cluster-randomized trial design, nine clinic sites were randomized to intervention and 16 clinic sites were randomized to usual care. Patient-level interventions included invitation letters, mailed fecal immunochemical tests (FITs), and call/text-based reminders. Year 1 intervention impact, which took place during the COVID-19 pandemic, was assessed as the proportion completing screening among individuals not up to date at baseline, which compared intervention and nonintervention clinics accounting for intraclinic cluster variation; confidence intervals (CIs) around differences not including 0 were interpreted as statistically significant.ResultsAmong 26,736 patients who met eligibility criteria, approximately 58% were female, 55% were Hispanic individuals, and 44% were Spanish speaking. The proportion completing screening was 11.5 percentage points (ppts) (95% CI, 6.1-16.9 ppts) higher in intervention versus usual care clinics. Variation in differences between intervention and usual care clinics was observed by sex (12.6 ppts [95% CI, 7.2-18.0 ppts] for females; 8.8 ppts [95% CI, 4.7-13.9 ppts] for males) and by racial and ethnic group (13.8 ppts [95% CI, 7.0-20.6 ppts] for Hispanic individuals; 13.0 ppts [95% CI, 3.6-22.4 ppts] for Asian individuals; 11.3 ppts [95% CI, 5.8-16.8 ppts] for non-Hispanic White individuals; 6.1 ppts [95% CI, 0.8-10.4 ppts] for Black individuals).ConclusionsA regional mailed FIT intervention was effective for increasing CRC screening rates across CHC systems serving diverse, low-income populations.
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- 2024
20. Datopotamab–deruxtecan plus durvalumab in early-stage breast cancer: the sequential multiple assignment randomized I-SPY2.2 phase 2 trial
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Shatsky, Rebecca A, Trivedi, Meghna S, Yau, Christina, Nanda, Rita, Rugo, Hope S, Davidian, Marie, Tsiatis, Butch, Wallace, Anne M, Chien, A Jo, Stringer-Reasor, Erica, Boughey, Judy C, Omene, Coral, Rozenblit, Mariya, Kalinsky, Kevin, Elias, Anthony D, Vaklavas, Christos, Beckwith, Heather, Williams, Nicole, Arora, Mili, Nangia, Chaitali, Roussos Torres, Evanthia T, Thomas, Brittani, Albain, Kathy S, Clark, Amy S, Falkson, Carla, Hershman, Dawn L, Isaacs, Claudine, Thomas, Alexandra, Tseng, Jennifer, Sanford, Amy, Yeung, Kay, Boles, Sarah, Chen, Yunni Yi, Huppert, Laura, Jahan, Nusrat, Parker, Catherine, Giridhar, Karthik, Howard, Frederick M, Blackwood, M Michele, Sanft, Tara, Li, Wen, Onishi, Natsuko, Asare, Adam L, Beineke, Philip, Norwood, Peter, Brown-Swigart, Lamorna, Hirst, Gillian L, Matthews, Jeffrey B, Moore, Brian, Symmans, W Fraser, Price, Elissa, Heditsian, Diane, LeStage, Barbara, Perlmutter, Jane, Pohlmann, Paula, DeMichele, Angela, Yee, Douglas, van ’t Veer, Laura J, Hylton, Nola M, and Esserman, Laura J
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Clinical Trials and Supportive Activities ,Precision Medicine ,Women's Health ,Cancer ,Clinical Research ,Breast Cancer ,6.1 Pharmaceuticals ,Good Health and Well Being ,Medical and Health Sciences ,Immunology ,Biomedical and clinical sciences ,Health sciences - Abstract
Sequential adaptive trial designs can help accomplish the goals of personalized medicine, optimizing outcomes and avoiding unnecessary toxicity. Here we describe the results of incorporating a promising antibody-drug conjugate, datopotamab-deruxtecan (Dato-DXd) in combination with programmed cell death-ligand 1 inhibitor, durvalumab, as the first sequence of therapy in the I-SPY2.2 phase 2 neoadjuvant sequential multiple assignment randomization trial for high-risk stage 2/3 breast cancer. The trial includes three blocks of treatment, with initial randomization to different experimental agent(s) (block A), followed by a taxane-based regimen tailored to tumor subtype (block B), followed by doxorubicin-cyclophosphamide (block C). Subtype-specific algorithms based on magnetic resonance imaging volume change and core biopsy guide treatment redirection after each block, including the option of early surgical resection in patients predicted to have a high likelihood of pathologic complete response, which is the primary endpoint assessed when resection occurs. There are two primary efficacy analyses: after block A and across all blocks for six prespecified HER2-negative subtypes (defined by hormone receptor status and/or response-predictive subtypes). In total, 106 patients were treated with Dato-DXd/durvalumab in block A. In the immune-positive subtype, Dato-DXd/durvalumab exceeded the prespecified threshold for success (graduated) after block A; and across all blocks, pathologic complete response rates were equivalent to the rate expected for the standard of care (79%), but 54% achieved that result after Dato-DXd/durvalumab alone (block A) and 92% without doxorubicin-cyclophosphamide (after blocks A + B). The treatment strategy across all blocks graduated in the hormone-negative/immune-negative subtype. No new toxicities were observed. Stomatitis was the most common side effect in block A. No patients receiving block A treatment alone had adrenal insufficiency. Dato-DXd/durvalumab is a promising therapy combination that can eliminate standard chemotherapy in many patients, particularly the immune-positive subtype.ClinicalTrials.gov registration: NCT01042379 .
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- 2024
21. Chromosomal instability as an architect of the cancer stemness landscape
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Baba, Shahnawaz A, Zakeri, Aran, and Desgrosellier, Jay S
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Women's Health ,Cancer ,Stem Cell Research - Nonembryonic - Human ,Stem Cell Research ,Breast Cancer ,2.1 Biological and endogenous factors ,Biological sciences ,Biomedical and clinical sciences - Abstract
Despite a critical role for tumor-initiating cancer stem cells (CSCs) in breast cancer progression, major questions remain about the properties and signaling pathways essential for their function. Recent discoveries highlighting mechanisms of CSC-resistance to the stress caused by chromosomal instability (CIN) may provide valuable new insight into the underlying forces driving stemness properties. While stress tolerance is a well-known attribute of CSCs, CIN-induced stress is distinctive since levels appear to increase during tumor initiation and metastasis. These dynamic changes in CIN levels may serve as a barrier constraining the effects of non-CSCs and shaping the stemness landscape during the early stages of disease progression. In contrast to most other stresses, CIN can also paradoxically activate pro-tumorigenic antiviral signaling. Though seemingly contradictory, this may indicate that mechanisms of CIN tolerance and pro-tumorigenic inflammatory signaling closely collaborate to define the CSC state. Together, these unique features may form the basis for a critical relationship between CIN and stemness properties.
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- 2024
22. Neoadjuvant Osimertinib for the Treatment of Stage I-IIIA Epidermal Growth Factor Receptor–Mutated Non–Small Cell Lung Cancer: A Phase II Multicenter Study
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Blakely, Collin M, Urisman, Anatoly, Gubens, Matthew A, Mulvey, Claire K, Allen, Greg M, Shiboski, Stephen C, Rotow, Julia K, Chakrabarti, Turja, Kerr, D Lucas, Aredo, Jacqueline V, Bacaltos, Bianca, Gee, Megan, Tan, Lisa, Jones, Kirk D, Devine, W Patrick, Doebele, Robert C, Aisner, Dara L, Patil, Tejas, Schenk, Erin L, Bivona, Trever G, Riess, Jonathan W, Coleman, Melissa, Kratz, Johannes R, and Jablons, David M
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Lung ,Women's Health ,Clinical Research ,Clinical Trials and Supportive Activities ,Cancer ,Minority Health ,Lung Cancer ,Patient Safety ,6.4 Surgery ,6.1 Pharmaceuticals ,Humans ,Acrylamides ,Female ,Carcinoma ,Non-Small-Cell Lung ,Aniline Compounds ,Male ,Lung Neoplasms ,Middle Aged ,ErbB Receptors ,Aged ,Neoadjuvant Therapy ,Mutation ,Neoplasm Staging ,Adult ,Protein Kinase Inhibitors ,Antineoplastic Agents ,Indoles ,Pyrimidines ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
PurposeTo assess the safety and efficacy of the third-generation epidermal growth factor receptor (EGFR) tyrosine kinase inhibitor osimertinib as neoadjuvant therapy in patients with surgically resectable stage I-IIIA EGFR-mutated non-small cell lung cancer (NSCLC).Patients and methodsThis was a multi-institutional phase II trial of neoadjuvant osimertinib for patients with surgically resectable stage I-IIIA (American Joint Committee on Cancer [AJCC] V7) EGFR-mutated (L858R or exon 19 deletion) NSCLC (ClinicalTrials.gov identifier: NCT03433469). Patients received osimertinib 80 mg orally once daily for up to two 28-day cycles before surgical resection. The primary end point was major pathological response (MPR) rate. Secondary safety and efficacy end points were also assessed. Exploratory end points included pretreatment and post-treatment tumor mutation profiling.ResultsA total of 27 patients were enrolled and treated with neoadjuvant osimertinib for a median 56 days before surgical resection. Twenty-four (89%) patients underwent subsequent surgery; three (11%) patients were converted to definitive chemoradiotherapy. The MPR rate was 14.8% (95% CI, 4.2 to 33.7). No pathological complete responses were observed. The ORR was 52%, and the median DFS was 40.9 months. One treatment-related serious adverse event (AE) occurred (3.7%). No patients were unable to undergo surgical resection or had surgery delayed because of an AE. The most common co-occurring tumor genomic alterations were in TP53 (42%) and RBM10 (21%).ConclusionTreatment with neoadjuvant osimertinib in surgically resectable (stage IA-IIIA, AJCC V7) EGFR-mutated NSCLC did not meet its primary end point for MPR rate. However, neoadjuvant osimertinib did not lead to unanticipated AEs, surgical delays, nor result in a significant unresectability rate.
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- 2024
23. Longitudinal activity monitoring and lifespan: quantifying the interface
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Iao, Su I, Kundu, Poorbita, Chen, Han, Carey, James R, and Müller, Hans-Georg
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Biochemistry and Cell Biology ,Biomedical and Clinical Sciences ,Clinical Sciences ,Biological Sciences ,Aging ,Behavioral and Social Science ,Generic health relevance ,Animals ,Longevity ,Humans ,Behavior ,Animal ,Ceratitis capitata ,Longitudinal Studies ,Reproduction ,age-at-death ,force of mortality ,functional data analysis ,longitudinal data ,mediterranean fruit fly ,Physiology ,Oncology and Carcinogenesis ,Developmental Biology - Abstract
Understanding the relationship between activity over the entire lifespan and longevity is an important facet of aging research. We present a comprehensive framework for the statistical analysis of longitudinal activity and behavioral monitoring and their relationship with age-at-death at the individual level, highlighting the importance of advanced methodological approaches in aging research. The focus is on animal models, where continuous monitoring activity in terms of movement, reproduction and behaviors over the entire lifespan is feasible at the individual level. We specifically demonstrate the methodology with data on activity monitoring for Mediterranean fruit flies. Advanced statistical methodologies to explore the interface between activity and age-at-death include functional principal component analysis, concurrent regression, Fréchet regression and point processes. While the focus of this perspective is on relating age-at-death with data on movement, reproduction, behavior and nutrition of Mediterranean fruit flies, the methodology equally pertains to data from other species, including human data.
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- 2024
24. Marizomib for patients with newly diagnosed glioblastoma: A randomized phase 3 trial
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Roth, Patrick, Gorlia, Thierry, Reijneveld, Jaap C, de Vos, Filip, Idbaih, Ahmed, Frenel, Jean-Sébastien, Le Rhun, Emilie, Sepulveda, Juan Manuel, Perry, James, Masucci, G Laura, Freres, Pierre, Hirte, Hal, Seidel, Clemens, Walenkamp, Annemiek, Lukacova, Slavka, Meijnders, Paul, Blais, Andre, Ducray, Francois, Verschaeve, Vincent, Nicholas, Garth, Balana, Carmen, Bota, Daniela A, Preusser, Matthias, Nuyens, Sarah, Dhermain, Fréderic, van den Bent, Martin, O’Callaghan, Chris J, Vanlancker, Maureen, Mason, Warren, and Weller, Michael
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Orphan Drug ,Clinical Trials and Supportive Activities ,Rare Diseases ,Neurosciences ,Comparative Effectiveness Research ,Brain Cancer ,Patient Safety ,Clinical Research ,Radiation Oncology ,Cancer ,Brain Disorders ,6.1 Pharmaceuticals ,Humans ,Glioblastoma ,Male ,Middle Aged ,Female ,Brain Neoplasms ,Aged ,Lactones ,Adult ,Temozolomide ,Pyrroles ,Survival Rate ,DNA Repair Enzymes ,Follow-Up Studies ,DNA Modification Methylases ,Chemoradiotherapy ,Prognosis ,Antineoplastic Combined Chemotherapy Protocols ,Young Adult ,EORTC 1709 ,glioma ,MGMT ,proteasome inhibitor ,randomized study ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundStandard treatment for patients with newly diagnosed glioblastoma includes surgery, radiotherapy (RT), and temozolomide (TMZ) chemotherapy (TMZ/RT→TMZ). The proteasome has long been considered a promising therapeutic target because of its role as a central biological hub in tumor cells. Marizomib is a novel pan-proteasome inhibitor that crosses the blood-brain barrier.MethodsEuropean Organisation for Research and Treatment of Cancer 1709/Canadian Cancer Trials Group CE.8 was a multicenter, randomized, controlled, open-label phase 3 superiority trial. Key eligibility criteria included newly diagnosed glioblastoma, age > 18 years and Karnofsky performance status > 70. Patients were randomized in a 1:1 ratio. The primary objective was to compare overall survival (OS) in patients receiving marizomib in addition to TMZ/RT→TMZ with patients receiving the only standard treatment in the whole population and in the subgroup of patients with MGMT promoter-unmethylated tumors.ResultsThe trial was opened at 82 institutions in Europe, Canada, and the U.S. A total of 749 patients (99.9% of the planned 750) were randomized. OS was not different between the standard and the marizomib arm (median 17 vs. 16.5 months; HR = 1.04; P = .64). PFS was not statistically different either (median 6.0 vs. 6.3 months; HR = 0.97; P = .67). In patients with MGMT promoter-unmethylated tumors, OS was also not different between standard therapy and marizomib (median 14.5 vs. 15.1 months, HR = 1.13; P = .27). More CTCAE grade 3/4 treatment-emergent adverse events were observed in the marizomib arm than in the standard arm.ConclusionsAdding marizomib to standard temozolomide-based radiochemotherapy resulted in more toxicity, but did not improve OS or PFS in patients with newly diagnosed glioblastoma.
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- 2024
25. Breast Cancer-Related Chemical Exposures in Firefighters
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Cardona, Bethsaida, Rodgers, Kathryn M, Trowbridge, Jessica, Buren, Heather, and Rudel, Ruthann A
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Biomedical and Clinical Sciences ,Health Services and Systems ,Engineering ,Health Sciences ,Automotive Engineering ,Oncology and Carcinogenesis ,Cancer ,Health Effects of Indoor Air Pollution ,Prevention ,Breast Cancer ,Women's Health ,Endocrine Disruptors ,Social Determinants of Health ,2.2 Factors relating to the physical environment ,benzene ,female firefighter ,flame retardant ,organohalogens ,per- and polyfluoroalkyl substance ,polycyclic aromatic hydrocarbon ,styrene ,volatile aromatics - Abstract
To fill a research gap on firefighter exposures and breast cancer risk, and guide exposure reduction, we aimed to identify firefighter occupational exposures linked to breast cancer. We conducted a systematic search and review to identify firefighter chemical exposures and then identified the subset that was associated with breast cancer. To do this, we compared the firefighter exposures with chemicals that have been shown to increase breast cancer risk in epidemiological studies or increase mammary gland tumors in experimental toxicology studies. For each exposure, we assigned a strength of evidence for the association with firefighter occupation and for the association with breast cancer risk. We identified twelve chemicals or chemical groups that were both linked to breast cancer and were firefighter occupational exposures, including polycyclic aromatic hydrocarbons, volatile aromatics, per- and polyfluoroalkyl substances, persistent organohalogens, and halogenated organophosphate flame retardants. Many of these were found at elevated levels in firefighting environments and were statistically significantly higher in firefighters after firefighting or when compared to the general population. Common exposure sources included combustion byproducts, diesel fuel and exhaust, firefighting foams, and flame retardants. Our findings highlight breast-cancer-related chemical exposures in the firefighting profession to guide equitable worker's compensation policies and exposure reduction.
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- 2024
26. The landscape of checkpoint inhibitors in oncology
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Haslam, Alyson, Kim, Myung Sun, Elbaz, Josh, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Immunotherapy ,Clinical Trials and Supportive Activities ,Cancer ,Clinical Research ,6.1 Pharmaceuticals ,Good Health and Well Being ,Humans ,Immune Checkpoint Inhibitors ,Neoplasms ,Cross-Sectional Studies ,Progression-Free Survival ,Drug Approval ,United States ,Clinical Trials as Topic ,Medical Oncology ,Immune checkpoint inhibitors ,Overall survival ,Response ,Registration trials ,Public Health and Health Services ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundImmune checkpoint inhibitor (ICI) therapies have become increasingly popular treatment options for patients with cancer, even for patients in non-metastatic settings. Survival and responses have been reported for individual tumor types, but little is known about these outcomes, collectively. We sought to provide an overview of overall survival (OS) and progression-free survival (PFS) in ICI drugs tested in registration trials.MethodsIn a cross-sectional analysis of US FDA oncology ICI drug approvals (2011-2023), we searched for supporting ICI registration trials. We characterized these trials, regarding differences in median OS and PFS between patients in intervention and control arm participants in ICI registration trials; percentage of patients who receive ICI crossover; and whether there is correlation between the percentage of crossover and differences in OS or PFS.ResultsFifty-six (54.4 %) approvals had trials that reported median OS for both intervention and control arms (median difference was 2.8 months; IQR: 2.2 to 5.0 months). Sixty-five (63.1 %) approvals had trials that reported PFS data for both arms (median of 0.9 months; IQR: -0.2 to 3.0 months). Subsequent therapy was common (median=18.9 %) and was significantly correlated with a higher difference in median OS in all studies with reported differences (R2 =0.15; p = 0.001).ConclusionICIs are increasingly used in the treatment of cancer, yet the median OS improvement is modest, and many ICIs have not been tested for OS benefit. OS is the outcome most meaningful for patients, and drug regulation should require better testing and reporting of these data.
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- 2024
27. Social media engagement of supportive care publications in oncology
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Ranganathan, Sruthi, Benjamin, David J, Haslam, Alyson, and Prasad, Vinay
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Policy and Administration ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Human Society ,Cancer ,Social Media ,Humans ,Cross-Sectional Studies ,Medical Oncology ,Neoplasms ,Bibliometrics ,Periodicals as Topic ,Social media ,Supportive care ,Oncology and carcinogenesis ,Policy and administration - Abstract
ImportanceThere is an increasing number of cancer 'survivors' and increasing research into supportive care. However, it is unknown how patterns of attention and citation differ between supportive and non-supportive cancer care research. We sought to estimate the engagement of high-impact studies of supportive compared to non-supportive cancer care papers.MethodsIn a cross-sectional review of top oncology journals (2016-2023), we reviewed studies examining supportive care strategies and a frequency-matched random sampling of studies on non-supportive interventions. We compared data on social engagement metrics, as represented by Altmetric scores and citations and funding status, by supportive care or non-supportive care articles.ResultsWe found overall Altmetric scores were no different between articles that did not test supportive care and those that did, with a numerically higher score for supportive care articles (86.0 vs 102; p=0.416). Other bibliometric statistics (such as the number of blogs, number of X users, and the number of X posts) obtained from Altmetric did not differ significantly between the two groups. Non-supportive cancer care papers had a significantly higher number of citations than supportive cancer care papers (45.6 in supportive care vs 141 in non-supportive care papers; p
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- 2024
28. The Proteogenomics of Prostate Cancer Radioresistance
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Haas, Roni, Frame, Gavin, Khan, Shahbaz, Neilsen, Beth K, Hong, Boon Hao, Yeo, Celestia PX, Yamaguchi, Takafumi N, Ong, Enya HW, Zhao, Wenyan, Carlin, Benjamin, Yeo, Eugenia LL, Tan, Kah Min, Bugh, Yuan Zhe, Zhu, Chenghao, Hugh-White, Rupert, Livingstone, Julie, Poon, Dennis JJ, Chu, Pek Lim, Patel, Yash, Tao, Shu, Ignatchenko, Vladimir, Kurganovs, Natalie J, Higgins, Geoff S, Downes, Michelle R, Loblaw, Andrew, Vesprini, Danny, Kishan, Amar U, Chua, Melvin LK, Kislinger, Thomas, Boutros, Paul C, and Liu, Stanley K
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Precision Medicine ,Prostate Cancer ,Human Genome ,Genetics ,Biotechnology ,Aging ,Urologic Diseases ,Cancer Genomics ,Radiation Oncology ,Male ,Humans ,Prostatic Neoplasms ,Radiation Tolerance ,Proteogenomics ,Cell Line ,Tumor ,DNA Polymerase theta ,Genomic Instability ,DNA Mismatch Repair ,Gene Expression Regulation ,Neoplastic ,DNA-Directed DNA Polymerase ,Radiation Dose Hypofractionation - Abstract
Prostate cancer is frequently treated with radiotherapy. Unfortunately, aggressive radioresistant relapses can arise, and the molecular underpinnings of radioresistance are unknown. Modern clinical radiotherapy is evolving to deliver higher doses of radiation in fewer fractions (hypofractionation). We therefore analyzed genomic, transcriptomic, and proteomic data to characterize prostate cancer radioresistance in cells treated with both conventionally fractionated and hypofractionated radiotherapy. Independent of fractionation schedule, resistance to radiotherapy involved massive genomic instability and abrogation of DNA mismatch repair. Specific prostate cancer driver genes were modulated at the RNA and protein levels, with distinct protein subcellular responses to radiotherapy. Conventional fractionation led to a far more aggressive biomolecular response than hypofractionation. Testing preclinical candidates identified in cell lines, we revealed POLQ (DNA Polymerase Theta) as a radiosensitizer. POLQ-modulated radioresistance in model systems and was predictive of it in large patient cohorts. The molecular response to radiation is highly multimodal and sheds light on prostate cancer lethality.SignificanceRadiation is standard of care in prostate cancer. Yet, we have little understanding of its failure. We demonstrate a new paradigm that radioresistance is fractionation specific and identified POLQ as a radioresistance modulator.
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- 2024
29. Impact of a Multidisciplinary Supportive Care Model Using Distress Screening at an Asian Ambulatory Cancer Center: A Cluster Randomized Controlled Trial
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Ke, Yu, Neo, Patricia Soek Hui, Yang, Grace Meijuan, Neo, Shirlyn Hui-Shan, Tan, Yung Ying, Tan, Yee Pin, Ramalingam, Mothi Babu, Loh, Kiley Wei-Jen, Quah, Daniel Song Chiek, Chew, Lita, Hui, Phebe En, Chan, Raymond Javan, Hwang, William Ying Khee, and Chan, Alexandre
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Clinical Trials and Supportive Activities ,Comparative Effectiveness Research ,Women's Health ,Health Services ,Behavioral and Social Science ,Prevention ,Clinical Research ,Rehabilitation ,Social Determinants of Health ,7.1 Individual care needs ,Good Health and Well Being ,Humans ,Female ,Middle Aged ,Male ,Quality of Life ,Adult ,Aged ,Cancer Survivors ,Psychological Distress ,Singapore ,Stress ,Psychological - Abstract
PurposeThe Accessible Cancer Care to Enable Support for Cancer Survivors (ACCESS) program adopts a multidisciplinary supportive care model with routine distress screening to triage newly diagnosed cancer survivors for additional support on the basis of distress levels. This study aimed to evaluate the clinical impact of ACCESS over 1 year.MethodsWe performed cluster random assignment at the oncologist level in a 1:1 ratio to receive ACCESS or usual care. Participants 21 years and older, newly diagnosed with breast or gynecologic cancer, and receiving care at National Cancer Centre Singapore were included. Outcomes assessed every 3 months for 1 year included quality of life (QoL) (primary), functioning, physical and psychological symptom burden, and activity levels. Data were analyzed using mixed-effects models.ResultsParticipants from 16 clusters (control = 90, intervention = 83) were analyzed. The ACCESS program did not significantly improve QoL (primary outcome). However, compared with usual care recipients, ACCESS recipients reported higher physical functioning (P = .017), role functioning (P = .001), and activity levels (P < .001) at 9 months and lower psychological distress (P = .025) at 12 months. ACCESS recipients screened with high distress had poorer QoL, lower role and social functioning, and higher physical symptom distress at 3 months but had comparable scores with ACCESS recipients without high distress after 12 months.ConclusionCompared with usual care, participation in the ACCESS program did not yield QoL improvement but showed earlier functioning recovery related to activities of daily living and reduced psychological distress. Routine distress screening is a promising mechanism to identify survivors with poorer health for more intensive supportive care.
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- 2024
30. Does Surgeon-Performed Intraoperative Wire Localization Allow for Lower Margin Positivity Rates Compared to Radiologist-Performed Preoperative Localization in Early Breast Cancer?
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Asmai, Reeta, Huy, Tess, Baker, Jennifer L, Yang, Hong-Ho, Thompson, Carlie K, and Kapoor, Nimmi S
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Women's Health ,Breast Cancer ,Cancer ,Minority Health ,Clinical Research ,Biomedical Imaging ,6.4 Surgery ,Surgery ,Clinical sciences ,Dentistry - Abstract
BackgroundThis study compares positive margin rates in breast conserving surgery (BCS) for early breast cancer using two localization techniques: surgeon-performed intraoperative ultrasound-guided wire localization (IOWL) versus radiologist-performed preoperative wire localization (POWL).MethodsPatients with unifocal breast cancer undergoing BCS with follow-up at a single institution were retrospectively identified. Factors associated with positive margins were identified.Results177 patients underwent IOWL (N = 85) or POWL (N = 92). There was a significantly lower rate of positive margins for IOWL vs. POWL (7.1 % vs. 23.9 %, p = 0.002) and a corresponding lower rate of re-excision for IOWL vs. POWL (5.9 % vs. 18.5 %, p = 0.011). Presence of DCIS was associated with positive margins (p = 0.015). After adjusting for presence of DCIS, tumor size, and volume of tissue removed, the positive margin rate was significantly lower in the IOWL group compared to the POWL group (aOR 0.34, 95 % CI 0.13-0.93).ConclusionsIn this study, adjusted analysis favored IOWL in achieving negative tumor margins. Prospective studies are needed to further explore the impact of IOWL on quality, cost-effectiveness, and patient experience.
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- 2024
31. ACR-ARS Practice Parameter for the Performance of Proton Beam Therapy
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Frank, Steven J, Das, Indra J, Simone, Charles B, Davis, Brian J, Deville, Curtiland, Liao, Zhongxing, Lo, Simon S, McGovern, Susan L, Parikh, Rahul R, Reilly, Michael, Small, William, and Schechter, Naomi R
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Medical and Biological Physics ,Physical Sciences ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Radiation Oncology ,Cancer ,7.3 Management and decision making ,Quality Education ,Proton therapy ,ACR ,ARS ,Practice parameter ,Radiation oncology - Abstract
PURPOSE: This practice parameter for the performance of proton beam radiation therapy was revised collaboratively by the American College of Radiology (ACR) and the American Radium Society (ARS). This practice parameter was developed to serve as a tool in the appropriate application of proton therapy in the care of cancer patients or other patients with conditions in which radiation therapy is indicated. It addresses clinical implementation of proton radiation therapy, including personnel qualifications, quality assurance (QA) standards, indications, and suggested documentation. MATERIALS AND METHODS: This practice parameter for the performance of proton beam radiation therapy was developed according to the process described under the heading The Process for Developing ACR Practice Parameters and Technical Standards on the ACR website (https://www.acr.org/Clinical-Resources/Practice-Parameters-and-Technical-Standards) by the Committee on Practice Parameters - Radiation Oncology of the ACR Commission on Radiation Oncology in collaboration with the ARS. RESULTS: The qualifications and responsibilities of personnel, such as the proton center Chief Medical Officer or Medical Director, Radiation Oncologist, Radiation Physicist, Dosimetrist and Therapist, are outlined, including the necessity for continuing medical education. Proton therapy standard clinical indications and methodologies of treatment management are outlined by disease site and treatment group (e.g. pediatrics) including documentation and the process of proton therapy workflow and equipment specifications. Additionally, this proton therapy practice parameter updates policies and procedures related to a quality assurance and performance improvement program (QAPI), patient education, infection control, and safety. CONCLUSION: As proton therapy becomes more accessible to cancer patients, policies and procedures as outlined in this practice parameter will help ensure quality and safety programs are effectively implemented to optimize clinical care.
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- 2024
32. The Surfactant Properties of Clindamycin as a Useful Adjunct for Removing Ruptured Silicone Implants
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Alnaseri, Tahera, Musavi, Leila, Deming, Timothy, Roostaeian, Jason, Da Lio, Andrew, Mason, Thomas G, and DeLong, Michael R
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Paediatrics ,Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis - Abstract
BackgroundSilicone gel removal after breast implant rupture is a difficult task. Silicone is hydrophobic and thus cannot be irrigated effectively with saline. Attempts at mechanical removal with sponges are often partially successful. Incomplete removal results in persistent silicone contamination with possible local inflammation, infection, and silicone granulomata. In this partially quantitative investigation, we assess the de-adhesion ability of different clindamycin formulations against known surfactant controls when combined with silicone gel.MethodsTo demonstrate surfactant properties in vitro, clindamycin phosphate, clindamycin hydrochloride, and a known surfactant, sodium dodecyl sulfate (SDS), were compared. An amount of 170 g of silicone gel placed in a dry glass container exhibited strong adherence to the container walls. In separate trials, clindamycin phosphate (300 mg in 100 mL), clindamycin HCl (300 mg in 100 mL), and SDS (1 g in 100 mL) solutions with normal saline were added to the silicone aggregate, and de-adhesion properties were compared.ResultsAll solutions aided in the de-adhesion of the sticky silicone from glass substrate. The SDS had the strongest effect, followed by clindamycin phosphate and then clindamycin HCl. The observed interactions suggested that all of the solutions behaved as ionic surfactant coating the silicone with negative charges via adsorption. However, the phosphate anionic formulation was associated with a greater surfactant effect than HCl.ConclusionsClindamycin acts as a surfactant to aid in the clinical removal of ruptured silicone gel. Clindamycin phosphate seems to have a stronger effect than clindamycin HCl, likely related to the negative charges on the phosphate groups.
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- 2024
33. Effect of Jardiance on glucose uptake into astrocytomas
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Ghezzi, Chiara, Ellingson, Benjamin M, Lai, Albert, Liu, Jie, Barrio, Jorge R, and Wright, Ernest M
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Brain Disorders ,Diabetes ,Clinical Research ,Brain Cancer ,Cancer ,Rare Diseases ,Biomedical Imaging ,Clinical Trials and Supportive Activities ,6.1 Pharmaceuticals ,5.1 Pharmaceuticals ,Humans ,Astrocytoma ,Brain Neoplasms ,Glucose ,Sodium-Glucose Transporter 2 Inhibitors ,Male ,Sodium-Glucose Transporter 2 ,Positron-Emission Tomography ,Glucosides ,Female ,Middle Aged ,Fluorodeoxyglucose F18 ,Aged ,Glioblastoma ,Me4FDG ,PET ,SGLT2 ,SGLT2i ,Neurosciences ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
PurposeSGLT2, the sodium glucose cotransporter two, is expressed in human pancreatic, prostate and brain tumors, and in a mouse cancer model SGLT2 inhibitors reduce tumor glucose uptake and growth. In this study we have measured the effect of a specific SGLT2 inhibitor, Jardiance® (Empagliflozin), on glucose uptake into astrocytomas in patients.MethodsWe have used a specific SGLT glucose tracer, α-methyl-4-[18F]fluoro-4-deoxy-α-D-glucopyranoside (Me4FDG), and Positron Emission Tomography (PET) to measure glucose uptake. Four of five patients enrolled had WHO grade IV glioblastomas, and one had a low grade WHO Grade II astrocytoma. Two dynamic brain PET scans were conducted on each patient, one before and one after treatment with a single oral dose of Jardiance, a specific SGLT2 inhibitor. As a control, we also determined the effect of oral Jardiance on renal SGLT2 activity.ResultsIn all five patients an oral dose (25 or 100 mg) of Jardiance reduced Me4FDG tumor accumulation, highly significant inhibition in four, and inhibited SGLT2 activity in the kidney.ConclusionsThese initial experiments show that SGLT2 is a functional glucose transporter in astocytomas, and Jardiance inhibited glucose uptake, a drug approved by the FDA to treat type 2 diabetes mellitus (T2DM), heart failure, and renal failure. We suggest that clinical trials be initiated to determine whether Jardiance reduces astrocytoma growth in patients.
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- 2024
34. Unleashing the potential of CD39-targeted cancer therapy: Breaking new ground and future prospects
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Zhou, Qiongyan, Shao, Shengwen, Minev, Theia, and Ma, Wenxue
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Cancer ,Precision Medicine ,5.1 Pharmaceuticals ,Good Health and Well Being ,CD39 ,Tumor Microenvironment ,Immunotherapy ,Angiogenesis ,Metabolic Reprogramming ,Animals ,Humans ,Neoplasms ,Apyrase ,Molecular Targeted Therapy ,Pharmacology and Pharmaceutical Sciences ,Oncology & Carcinogenesis ,Pharmacology and pharmaceutical sciences - Abstract
The review article titled CD39 Transforming Cancer Therapy by Modulating Tumor Microenvironment published in June 2024 in Cancer Letters provides a comprehensive overview of CD39's multifaceted roles in cancer, particularly its influence on immunoregulation, angiogenesis, and metabolic reprogramming within the tumor microenvironment (TME). This commentary builds on that foundation by incorporating recent advancements in CD39 research, highlighting unresolved issues, and proposing future research directions. We delve into the therapeutic potential of targeting CD39, addressing clinical translation challenges, and exploring the integration of CD39-based strategies into precision oncology.
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- 2024
35. Targeting Patient-Derived Orthotopic Gastric Cancers with a Fluorescent Humanized Anti-CEA Antibody
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Cox, Kristin E, Turner, Michael A, Lwin, Thinzar M, Amirfakhri, Siamak, Kelly, Kaitlyn J, Hosseini, Mojgan, Ghosh, Pradipta, Obonyo, Marygorret, Hoffman, Robert M, Yazaki, Paul J, and Bouvet, Michael
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,Orphan Drug ,Rare Diseases ,Digestive Diseases ,5.1 Pharmaceuticals ,Stomach Neoplasms ,Animals ,Humans ,Mice ,Carcinoembryonic Antigen ,Adenocarcinoma ,Xenograft Model Antitumor Assays ,Antibodies ,Monoclonal ,Humanized ,Fluorescent Dyes ,Tumor Cells ,Cultured ,Female ,Indoles ,Optical Imaging ,Gastrectomy ,Mice ,Nude ,Cell Line ,Tumor ,Gastric cancer ,Patient-derived orthotopic xenograft ,PDOX ,Fluorescence ,Fluorescent antibody ,CEA ,Tumor targeting ,Tumor labeling ,Gastric cancer ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundGastric cancer poses a major diagnostic and therapeutic challenge as surgical resection provides the only opportunity for a cure. Specific labeling of gastric cancer could distinguish resectable and nonresectable disease and facilitate an R0 resection, which could improve survival.MethodsTwo patient-derived gastric cancer lines, KG8 and KG10, were established from surgical specimens of two patients who underwent gastrectomy for gastric adenocarcinoma. Harvested tumor fragments were implanted into the greater curvature of the stomach to establish patient-derived orthotopic xenograft (PDOX) models. M5A (humanized anti-CEA antibody) or IgG control antibodies were conjugated with the near-infrared dye IRDye800CW. Mice received 50 µg of M5A-IR800 or 50 µg of IgG-IR800 intravenously and were imaged after 72 hr. Fluorescence imaging was performed by using the LI-COR Pearl Imaging System. A tumor-to-background ratio (TBR) was calculated by dividing the mean fluorescence intensity of the tumor versus adjacent stomach tissue.ResultsM5A-IR800 administration resulted in bright labeling of both KG8 and K10 tumors. In the KG8 PDOX models, the TBR for M5A-IR800 was 5.85 (SE ± 1.64) compared with IgG-IR800 at 0.70 (SE ± 0.17). The K10 PDOX models had a TBR of 3.71 (SE ± 0.73) for M5A-IR800 compared with 0.66 (SE ± 0.12) for IgG-IR800.ConclusionsHumanized anti-CEA (M5A) antibodies conjugated to fluorescent dyes provide bright and specific labeling of gastric cancer PDOX models. This tumor-specific fluorescent antibody is a promising potential clinical tool to detect the extent of disease for the determination of resectability as well as to visualize tumor margins during gastric cancer resection.
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- 2024
36. Clinical Validity and Utility of Circulating Tumor DNA (ctDNA) Testing in Advanced Non-small Cell Lung Cancer (aNSCLC): A Systematic Literature Review and Meta-analysis
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Chen, Cheng, Douglas, Michael P, Ragavan, Meera V, Phillips, Kathryn A, and Jansen, Jeroen P
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Biomedical and Clinical Sciences ,Clinical Sciences ,Oncology and Carcinogenesis ,Genetics ,Lung ,Health Disparities ,Cancer ,Lung Cancer ,Good Health and Well Being ,Humans ,Biomarkers ,Tumor ,Carcinoma ,Non-Small-Cell Lung ,Circulating Tumor DNA ,High-Throughput Nucleotide Sequencing ,Lung Neoplasms ,Mutation ,Sensitivity and Specificity ,Pharmacology and Pharmaceutical Sciences ,Oncology & Carcinogenesis ,Pharmacology & Pharmacy ,Pharmacology and pharmaceutical sciences - Abstract
PurposeCirculating tumor DNA (ctDNA) testing has become a promising tool to guide first-line (1L) targeted treatment for advanced non-small cell lung cancer (aNSCLC). This study aims to estimate the clinical validity (CV) and clinical utility (CU) of ctDNA-based next-generation sequencing (NGS) for oncogenic driver mutations to inform 1L treatment decisions in aNSCLC through a systematic literature review and meta-analysis.MethodsA systematic literature search was conducted in PubMed/MEDLINE and Embase to identify randomized control trials or observational studies reporting CV/CU on ctDNA testing in patients with aNSCLC. Meta-analyses were performed using bivariate random-effects models to estimate pooled sensitivity and specificity. Progression-free/overall survival (PFS/OS) was summarized for CU studies.ResultsA total of 20 studies were identified: 17 CV only, 2 CU only, and 1 both, and 13 studies were included for the meta-analysis on multi-gene detection. The overall sensitivity and specificity for ctDNA detection of any mutation were 0.69 (95% CI 0.63-0.74) and 0.99 (95% CI 0.97-1.00), respectively. However, sensitivity varied greatly by driver gene, ranging from 0.29 (95% CI 0.13-0.53) for ROS1 to 0.77 (95% CI 0.63-0.86) for KRAS. Two studies that compared PFS with ctDNA versus tissue-based testing followed by 1L targeted therapy found no significant differences. One study reported OS curves on ctDNA-matched and tissue-matched therapies but no hazard ratios were provided.ConclusionsctDNA testing demonstrated an overall acceptable diagnostic accuracy in patients with aNSCLC, however, sensitivity varied greatly by driver mutation. Further research is needed, especially for uncommon driver mutations, to better understand the CU of ctDNA testing in guiding targeted treatments for aNSCLC.
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- 2024
37. Bidirectional relationship between acute pancreatitis and pancreatic cancer
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Jeon, Christie Y, Arain, Mustafa A, Korc, Murray, Kozarek, Richard A, and Phillips, Anna E
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Rare Diseases ,Cancer ,Digestive Diseases ,Pancreatic Cancer ,Prevention ,Oral and gastrointestinal ,Humans ,Pancreatitis ,Pancreatic Neoplasms ,Carcinoma ,Pancreatic Ductal ,Risk Factors ,Acute Disease ,acute pancreatitis ,pancreatic adenocarcinoma ,pancreatic cancer ,pancreatic inflammation ,Clinical Sciences ,Gastroenterology & Hepatology ,Clinical sciences - Abstract
Purpose of reviewThe burdens of pancreatic ductal adenocarcinoma (PDAC) and acute pancreatitis are increasing globally. We reviewed current literature on whether acute pancreatitis is a causal factor for PDAC and examined clinical manifestations of PDAC-associated acute pancreatitis.Recent findingsRecent findings detail the timing of acute pancreatitis before and after PDAC occurrence, further solidifying the evidence for PDAC-associated acute pancreatitis and for acute pancreatitis as a causal risk factor for PDAC. The risk of PDAC remains elevated above the general population in patients with distant history of acute pancreatitis. PDAC risk also increases with recurrent acute pancreatitis episodes, independent of smoking and alcohol. Mechanisms linking acute pancreatitis to PDAC include inflammation and neutrophil infiltration, which can be attenuated by suppressing inflammation and/or epigenetic modulation, thus slowing the progression of acinar-to-ductal metaplasia. Clinical presentation and management of acute pancreatitis in the context of PDAC are discussed, including challenges acute pancreatitis poses in the diagnosis and treatment of PDAC, and novel interventions for PDAC-associated acute pancreatitis.SummaryPDAC risk may be reduced with improved acute pancreatitis prevention and treatment, such as antiinflammatories or epigenetic modulators. Increased acute pancreatitis and PDAC burden warrant more research on better diagnosis and management of PDAC-associated acute pancreatitis.
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- 2024
38. The CCL2-CCR4 axis promotes Regulatory T cell trafficking to canine glioma tissues
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Panek, WK, Toedebusch, RG, Mclaughlin, BE, Dickinson, PJ, Van Dyke, JE, Woolard, KD, Berens, ME, Lesniak, MS, Sturges, BK, Vernau, KM, Li, C, Miska, J, and Toedebusch, Christine M
- Subjects
Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Immunotherapy ,Brain Cancer ,Cancer ,Brain Disorders ,Rare Diseases ,Neurosciences ,2.1 Biological and endogenous factors ,Dogs ,Animals ,Receptors ,CCR4 ,T-Lymphocytes ,Regulatory ,Glioma ,Chemokine CCL2 ,Brain Neoplasms ,Cell Line ,Tumor ,Cell Movement ,Humans ,Dog ,Glioblastoma ,Tumor-infiltrating lymphocyte ,CCL2 ,CCR4 ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
PurposeSpontaneously occurring glioma in pet dogs is increasingly recognized as a valuable translational model for human glioblastoma. Canine high-grade glioma and human glioblastomas share many molecular similarities, including the accumulation of immunosuppressive regulatory T cells (Tregs) that inhibit anti-tumor immune responses. Identifying in dog mechanisms responsible for Treg recruitment may afford to target the cellular population driving immunosuppression, the results providing a rationale for translational clinical studies in human patients. Our group has previously identified C-C motif chemokine 2 (CCL2) as a glioma-derived T-reg chemoattractant acting on chemokine receptor 4 (CCR4) in a murine orthotopic glioma model. Recently, we demonstrated a robust increase of CCL2 in the brain tissue of canine patients bearing high-grade glioma.MethodsWe performed a series of in vitro experiments using canine Tregs and patient-derived canine glioma cell lines (GSC 1110, GSC 0514, J3T-Bg, G06A) to interrogate the CCL2-CCR4 signaling axis in the canine.ResultsWe established a flow cytometry gating strategy for identifying and isolating FOXP3+ Tregs in dogs. The canine CD4 + CD25high T-cell population was highly enriched in FOXP3 and CCR4 expression, indicating they are bona fide Tregs. Canine Treg migration was enhanced by CCL2 or by glioma cell line-derived supernatant. Blockade of the CCL2-CCR4 axis significantly reduced migration of canine Tregs. CCL2 mRNA was expressed in all glioma cell lines, and expression increased when exposed to Tregs but not CD4 + helper T-cells.ConclusionOur study validates CCL2-CCR4 as a bi-directional Treg-glioma immunosuppressive and tumor-promoting axis in canine high-grade glioma.
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- 2024
39. Protocol for producing hyperpolarized 13C-bicarbonate for clinical MRI of extracellular pH in aggressive tumors
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Mu, Changhua, Liu, Xiaoxi, Riselli, Andrew, Slater, James, Escobar, Evelyn, Dang, Duy, Drapeau, Scott, Santos, Romelyn Delos, Andosca, Stacy, Nguyen, Hao, Larson, Peder EZ, Bok, Robert, Vigneron, Daniel B, Kurhanewicz, John, Wilson, David M, and Flavell, Robert R
- Subjects
Physical Sciences ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Biomedical Imaging ,Cancer ,Biotechnology and bioengineering ,Chemistry ,Clinical Protocol ,Health Sciences ,Metabolism ,Molecular/Chemical Probes - Abstract
Tumor acidosis is one of the hallmarks indicating the initiation and progression of various cancers. Here, we present a protocol for preparing a hyperpolarized (HP) 13C-bicarbonate tissue pH MRI imaging contrast agent to detect aggressive tumors. We describe the steps for the formulation and polarization of a precursor molecule 13C-glycerol carbonate (13C-GLC), the post-dissolution reaction, and converting HP 13C-GLC to an injectable HP 13C-bicarbonate solution. We then detail procedures for MRI data acquisition to generate tumor pH maps for assessing tumor aggressiveness. For complete details on the use and execution of this protocol, please refer to Mu et al.1.
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- 2024
40. Volumetric hyperthermia delivery using the ExAblate Body MR-guided focused ultrasound system
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Kim, Kisoo, Gupta, Pragya, Narsinh, Kazim, Diederich, Chris J, and Ozhinsky, Eugene
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Bioengineering ,Clinical Research ,Biomedical Imaging ,Humans ,Hyperthermia ,Induced ,Magnetic Resonance Imaging ,High-Intensity Focused Ultrasound Ablation ,Phantoms ,Imaging ,ExAblate body array ,Hyperthermia ,MR-guided focused ultrasound ,drug delivery ,focused ultrasound ,volumetric heating ,Oncology & Carcinogenesis ,Clinical sciences - Abstract
ObjectivesTo investigate image-guided volumetric hyperthermia strategies using the ExAblate Body MR-guided focused ultrasound ablation system, involving mechanical transducer movement and sector-vortex beamforming.Materials and methodsAcoustic and thermal simulations were performed to investigate volumetric hyperthermia using mechanical transducer movement combined with sector-vortex beamforming, specifically for the ExAblate Body transducer. The system control in the ExAblate Body system was modified to achieve fast transducer movement and MR thermometry-based hyperthermia control, mechanical transducer movements and electronic sector-vortex beamforming were combined to optimize hyperthermia delivery. The experimental validation was performed using a tissue-mimicking phantom.ResultsThe developed simulation framework allowed for a parametric study with varying numbers of heating spots, sonication durations, and transducer movement times to evaluate the hyperthermia characteristics for mechanical transducer movement and sector-vortex beamforming. Hyperthermic patterns involving 2-4 sequential focal spots were analyzed. To demonstrate the feasibility of volumetric hyperthermia in the system, a tissue-mimicking phantom was sonicated with two distinct spots through mechanical transducer movement and sector-vortex beamforming. During hyperthermia, the average values of Tmax, T10, Tavg, T90, and Tmin over 200 s were measured within a circular ROI with a diameter of 10 pixels. These values were found to be 8.6, 7.9, 6.6, 5.2, and 4.5 °C, respectively, compared to the baseline temperature.ConclusionsThis study demonstrated the volumetric hyperthermia capabilities of the ExAblate Body system. The simulation framework developed in this study allowed for the evaluation of hyperthermia characteristics that could be implemented with the ExAblate MRgFUS system.
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- 2024
41. Spending on anticancer drugs among Medicare beneficiaries: Analyzing predictors of drug expenditures
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Nee, Ashley, Haslam, Alyson, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,5.1 Pharmaceuticals ,Good Health and Well Being ,Drug pricing ,Medicare ,Oncology ,Oncology and carcinogenesis ,Policy and administration - Abstract
ObjectiveTo evaluate the factors associated with Medicare spending on newly approved anticancer drugs in the US from 2012 through 2021.Patient and methodsUsing a cross-sectional analysis, we searched US FDA new oncology drug approvals (2012-2021). We analyzed clinical attributes and institutional factors influencing the annual cost of new anticancer drugs in the US. Annual treatment cost was calculated based on average spending per beneficiary from the Centers for Medicare and Medicaid Services, with product factors sourced from the FDA's annual New Drug Therapy Approval reports and drug package inserts at the time of approval.ResultsOver a ten-year period, 112 new anticancer drugs were approved, of which 97 met the study's criteria. A significant majority, 93 %, received expedited development designations from the FDA. At the time of approval, 40 % of these drugs had data on progression-free survival, and 19 % had data on overall survival; 29 % were first-in-class. The study found a significant relationship between the year of approval and factors associated with the size of the treatment population. No statistically significant relationship was found between the clinical value of a drug and its price.ConclusionsSpending on anticancer drugs by Medicare are predominantly determined by reference pricing and the size of the anticipated treatment population, without an association with therapeutic value. The study advocates for reforms in reimbursement mechanisms for drugs lacking comparator arms and greater transparency for patients treated with these drugs.
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- 2024
42. Intramammary Labeling of Epithelial Cell Division
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Machiela, Maia N and Hovey, Russell C
- Subjects
Biomedical and Clinical Sciences ,Clinical Sciences ,Breast Cancer ,Cancer ,Women's Health ,Animals ,Mammary Glands ,Animal ,Female ,Epithelial Cells ,Sheep ,Bromodeoxyuridine ,Cell Division ,Deoxyuridine ,Cell Proliferation ,Staining and Labeling ,Progesterone ,Mitosis ,Estrogens ,Mammary gland ,Ethynyl deoxyuridine ,Oncology & Carcinogenesis ,Clinical sciences - Abstract
Thymidine analogs such as ethynyl deoxyuridine (EdU) or bromodeoxyuridine (BrdU) can be used to label mitosis of mammary epithelial cells (MEC) and to quantify their proliferation. However, labeling cells in larger animals requires considerable amounts of chemical that can be costly and hazardous. We developed a strategy to infuse EdU into the mammary glands of ewes to directly label mitotic MEC. First, each udder half of nulliparous ewes (n = 2) received an intramammary infusion of one of four different concentrations of EdU (0, 0.1, 1.0 or 10 mM) which was compared to BrdU IV (5 mg/kg) 24 h later. Tissues were analyzed by immunofluorescent histochemistry to detect EdU, BrdU, and total MEC. Of the EdU doses tested, 10 mM EdU yielded the greatest labeling index, while a proportion of MEC were labeled by both EdU and BrdU. We next sought to establish whether intramammary labeling could detect the induction of mitosis after exposure to exogenous estrogen and progesterone (E + P). We first infused EdU (10 mM) into the right udder half of ewes (n = 6) at t 0, followed by thymidine (100 mM) 24 h later to prevent further labeling. Three ewes were then administered E + P for 5 d, while n = 3 ewes served as controls. On d 5, EdU was infused into the left udder half of all mammary glands alongside BrdU IV (5 mg/kg). By the time of necropsy 24 h later an average MEC labeling index of 2.9% resulted from EdU delivered at t 0. In the left half of the udder on d 5, CON glands had a final EdU labeling index of 3.4% while glands exposed to E + P had a labeling index of 4.6% (p = 0.05). The corresponding degree of labeling with BrdU was 5.6% in CON glands, and 12% following E + P (p
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- 2024
43. Single-cell RNA sequencing of appendiceal adenocarcinoma reveals a low proportion of epithelial cells and a fibroblast enriched tumor microenvironment
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Gunes, BB, Hornstein, NJ, Wang, M, Yousef, M, Fanaeian, MM, Yousef, A, Chowdhury, S, Zeineddine, MA, Haymaker, C, Helmink, B, Fournier, K, and Shen, JP
- Subjects
Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Rare Diseases ,Human Genome ,Cancer Genomics ,Cancer ,Genetics ,Colo-Rectal Cancer ,Digestive Diseases - Published
- 2024
44. Late effects surveillance adherence among young adult childhood cancer survivors: A population‐based study
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Milam, Joel, Kim, Yoonji, Roth, Michael, and Freyer, David R
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Paediatrics ,Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Breast Cancer ,Cardiovascular ,Prevention ,Rare Diseases ,Pediatric ,Rehabilitation ,Clinical Research ,Women's Health ,Pediatric Cancer ,Cancer ,2.4 Surveillance and distribution ,7.1 Individual care needs ,Quality Education ,Humans ,Cancer Survivors ,Female ,Male ,Young Adult ,Adolescent ,Neoplasms ,Adult ,Child ,Follow-Up Studies ,Patient Compliance ,Child ,Preschool ,childhood cancers ,late effects ,surveillance ,young adults ,Clinical Sciences ,Paediatrics and Reproductive Medicine ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
Lifelong, guideline-based monitoring for late effects is recommended for childhood cancer survivors (CCS). We examined rates of receiving surveillance tests among at-risk young adult CCS in a population-based study (n = 253; 50% Hispanic/Latino; mean post-treatment interval 14.5 years, range: 5-22). Adherence rates were 36.1%, 31.9%, and 36.4% among those indicated for cardiac (n = 119), thyroid (n = 68), and breast (n = 66) surveillance, respectively, indicating that poor surveillance among long-term CCS is widespread. Receipt of any of these surveillance tests was positively associated with being in follow-up care, having any health insurance (vs. none), and receiving education about need for follow-up with surveillance (all p-values less than .05).
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- 2024
45. The Toxoplasma secreted effector TgWIP modulates dendritic cell motility by activating host tyrosine phosphatases Shp1 and Shp2
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Morales, Pavel, Brown, Abbigale J, Sangaré, Lamba Omar, Yang, Sheng, Kuihon, Simon VNP, Chen, Baoyu, and Saeij, Jeroen PJ
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Biochemistry and Cell Biology ,Biological Sciences ,Biodefense ,Emerging Infectious Diseases ,Foodborne Illness ,Infectious Diseases ,2.1 Biological and endogenous factors ,Toxoplasma ,Protein Tyrosine Phosphatase ,Non-Receptor Type 11 ,Dendritic Cells ,Cell Movement ,Animals ,Protein Tyrosine Phosphatase ,Non-Receptor Type 6 ,Protozoan Proteins ,Humans ,Mice ,rho-Associated Kinases ,Toxoplasmosis ,Mice ,Inbred C57BL ,TgWIP ,Dendritic cells ,Shp1 ,Shp2 ,Dissemination ,Physiology ,Clinical Sciences ,Biochemistry & Molecular Biology ,Biochemistry and cell biology ,Medical biochemistry and metabolomics ,Oncology and carcinogenesis - Abstract
The obligate intracellular parasite Toxoplasma gondii causes life-threatening toxoplasmosis to immunocompromised individuals. The pathogenesis of Toxoplasma relies on its swift dissemination to the central nervous system through a 'Trojan Horse' mechanism using infected leukocytes as carriers. Previous work found TgWIP, a protein secreted from Toxoplasma, played a role in altering the actin cytoskeleton and promoting cell migration in infected dendritic cells (DCs). However, the mechanism behind these changes was unknown. Here, we report that TgWIP harbors two SH2-binding motifs that interact with tyrosine phosphatases Shp1 and Shp2, leading to phosphatase activation. DCs infected with Toxoplasma exhibited hypermigration, accompanying enhanced F-actin stress fibers and increased membrane protrusions such as filopodia and pseudopodia. By contrast, these phenotypes were abrogated in DCs infected with Toxoplasma expressing a mutant TgWIP lacking the SH2-binding motifs. We further demonstrated that the Rho-associated kinase (Rock) is involved in the induction of these phenotypes, in a TgWIP-Shp1/2 dependent manner. Collectively, the data uncover a molecular mechanism by which TgWIP modulates the migration dynamics of infected DCs in vitro.
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- 2024
46. Hypobaric hypoxia exposure regulates tissue distribution of nanomedicine for enhanced cancer therapy
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Tao, Ye and Chen, Zhongping
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Medical Biotechnology ,Biomedical and Clinical Sciences ,Digestive Diseases ,Rare Diseases ,Cancer ,Nanotechnology ,Liver Disease ,Bioengineering ,Development of treatments and therapeutic interventions ,5.1 Pharmaceuticals ,Medical biotechnology ,Oncology and carcinogenesis - Abstract
Background: Effective drug delivery of nanomedicines to targeted sites remains challenging. Given that hypobaric hypoxia and hyperbaric oxygen exposure can significantly change pharmacokinetics of drugs, it is interesting to determine whether they can regulate tissue distribution of nanomedicine, especially in tumor, for enhanced cancer therapy. Results: Hypobaric hypoxia exposure improved the pharmacokinetics of paclitaxel-loaded liposomes and facilitated their distribution in the heart and liver, whereas hyperbaric oxygen exposure did not benefit and even impaired the pharmacokinetics and distribution. Particularly, both hypobaric hypoxia and hyperbaric oxygen exposure could not improve the distribution in subcutaneous tumor. Thus, we constructed orthotopic liver tumor model and discussed whether high distribution of the liposomal nanomedicine in the liver, facilitated by hypobaric hypoxia exposure, could ensure their effective accumulation in liver tumor for enhanced cancer therapy. Conclusions: The liposomal nanomedicine with adjuvant hypobaric hypoxia exposure significantly inhibited the growth of orthotopic liver tumor for prolonged survival time, achieved by hypobaric hypoxia-promoted accumulation at tumor sites of the liver. It might be the first example of the application of adjuvant intermittent hypobaric hypoxia exposure in treating liver cancer.
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- 2024
47. The epidemiologic case for urban health: conceptualizing and measuring the magnitude of challenges and potential benefits
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Garber, Michael D, Benmarhnia, Tarik, de Nazelle, Audrey, Nieuwenhuijsen, Mark, and Rojas-Rueda, David
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Public Health ,Health Sciences ,Human Society ,8.3 Policy ,ethics ,and research governance ,8.4 Research design and methodologies (health services) ,Generic health relevance ,Good Health and Well Being ,Biochemistry and Cell Biology ,Clinical Sciences ,Oncology and Carcinogenesis - Abstract
We discuss how epidemiology has been and can continue to be used to advance understanding of the links between urban areas and health informed by an existing urban-health conceptual framework. This framework considers urban areas as contexts for health, determinants of health and modifiers of health pathways, and part of a complex system that affects health. We highlight opportunities for descriptive epidemiology to inform the context of urban health, for example, by characterizing the social and physical environments that give rise to health and the actions that change those conditions. We then describe inferential tools for evaluating the impact of group-level actions (e.g., interventions, policies) on urban health, providing some examples, and describing assumptions and challenges. Finally, we discuss opportunities and challenges of applying systems thinking and methods to advance urban health. While different conceptual frames lead to different insights, each perspective demonstrates that urban health is a major and growing challenge. The effectiveness of urban health knowledge, action, and policy as the world continues to urbanize can be informed by applying and expanding upon research and surveillance methods described here.
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- 2024
48. Perceptions, prevalence, and patterns of cannabis use among cancer patients treated at 12 NCI-Designated Cancer Centers
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Ellison, Gary L, Helzlsouer, Kathy J, Rosenfield, Sonia M, Kim, Yun, Ashare, Rebecca L, Blaes, Anne H, Cullen, Jennifer, Doran, Neal, Ebbert, Jon O, Egan, Kathleen M, Heffner, Jaimee L, Lee, Richard T, McClure, Erin A, McDaniels-Davidson, Corinne, Meghani, Salimah H, Newcomb, Polly A, Nugent, Shannon, Hernandez-Ortega, Nicholas, Salz, Talya, Vidot, Denise C, Worster, Brooke, and Zylla, Dylan M
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Behavioral and Social Science ,Women's Health ,Cancer ,Clinical Research ,Cannabinoid Research ,Social Determinants of Health ,7.1 Individual care needs ,Humans ,Neoplasms ,Female ,Male ,United States ,Middle Aged ,Prevalence ,Adult ,Medical Marijuana ,National Cancer Institute (U.S.) ,Surveys and Questionnaires ,Cancer Care Facilities ,Aged ,Perception ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundThe legal climate for cannabis use has dramatically changed with an increasing number of states passing legislation legalizing access for medical and recreational use. Among cancer patients, cannabis is often used to ameliorate adverse effects of cancer treatment. Data are limited on the extent and type of use among cancer patients during treatment and the perceived benefits and harms. This multicenter survey was conducted to assess the use of cannabis among cancer patients residing in states with varied legal access to cannabis.MethodsA total of 12 NCI-Designated Cancer Centers, across states with varied cannabis-access legal status, conducted surveys with a core questionnaire to assess cannabis use among recently diagnosed cancer patients. Data were collected between September 2021 and August 2023 and pooled across 12 cancer centers. Frequencies and 95% confidence intervals for core survey measures were calculated, and weighted estimates are presented for the 10 sites that drew probability samples.ResultsOverall reported cannabis use since cancer diagnosis among survey respondents was 32.9% (weighted), which varied slightly by state legalization status. The most common perceived benefits of use were for pain, sleep, stress and anxiety, and treatment side effects. Reported perceived risks were less common and included inability to drive, difficulty concentrating, lung damage, addiction, and impact on employment. A majority reported feeling comfortable speaking to health-care providers though, overall, only 21.5% reported having done so. Among those who used cannabis since diagnosis, the most common modes were eating in food, smoking, and pills or tinctures, and the most common reasons were for sleep disturbance, followed by pain and stress and anxiety with 60%-68% reporting improved symptoms with use.ConclusionThis geographically diverse survey demonstrates that patients use cannabis regardless of its legal status. Addressing knowledge gaps concerning benefits and harms of cannabis use during cancer treatment is critical to enhance patient-provider communication.
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- 2024
49. Concurrent RB1 Loss and BRCA Deficiency Predicts Enhanced Immunologic Response and Long-term Survival in Tubo-ovarian High-grade Serous Carcinoma
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Saner, Flurina AM, Takahashi, Kazuaki, Budden, Timothy, Pandey, Ahwan, Ariyaratne, Dinuka, Zwimpfer, Tibor A, Meagher, Nicola S, Fereday, Sian, Twomey, Laura, Pishas, Kathleen I, Hoang, Therese, Bolithon, Adelyn, Traficante, Nadia, Group, for the Australian Ovarian Cancer Study, Alsop, Kathryn, Christie, Elizabeth L, Kang, Eun-Young, Nelson, Gregg S, Ghatage, Prafull, Lee, Cheng-Han, Riggan, Marjorie J, Alsop, Jennifer, Beckmann, Matthias W, Boros, Jessica, Brand, Alison H, Brooks-Wilson, Angela, Carney, Michael E, Coulson, Penny, Courtney-Brooks, Madeleine, Cushing-Haugen, Kara L, Cybulski, Cezary, El-Bahrawy, Mona A, Elishaev, Esther, Erber, Ramona, Gayther, Simon A, Gentry-Maharaj, Aleksandra, Gilks, C Blake, Harnett, Paul R, Harris, Holly R, Hartmann, Arndt, Hein, Alexander, Hendley, Joy, Hernandez, Brenda Y, Jakubowska, Anna, Jimenez-Linan, Mercedes, Jones, Michael E, Kaufmann, Scott H, Kennedy, Catherine J, Kluz, Tomasz, Koziak, Jennifer M, Kristjansdottir, Björg, Le, Nhu D, Lener, Marcin, Lester, Jenny, Lubiński, Jan, Mateoiu, Constantina, Orsulic, Sandra, Ruebner, Matthias, Schoemaker, Minouk J, Shah, Mitul, Sharma, Raghwa, Sherman, Mark E, Shvetsov, Yurii B, Soong, T Rinda, Steed, Helen, Sukumvanich, Paniti, Talhouk, Aline, Taylor, Sarah E, Vierkant, Robert A, Wang, Chen, Widschwendter, Martin, Wilkens, Lynne R, Winham, Stacey J, Anglesio, Michael S, Berchuck, Andrew, Brenton, James D, Campbell, Ian, Cook, Linda S, Doherty, Jennifer A, Fasching, Peter A, Fortner, Renée T, Goodman, Marc T, Gronwald, Jacek, Huntsman, David G, Karlan, Beth Y, Kelemen, Linda E, Menon, Usha, Modugno, Francesmary, Pharoah, Paul DP, Schildkraut, Joellen M, Sundfeldt, Karin, Swerdlow, Anthony J, Goode, Ellen L, DeFazio, Anna, Köbel, Martin, Ramus, Susan J, Bowtell, David DL, and Garsed, Dale W
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Immunology ,Genetics ,Women's Health ,Rare Diseases ,Orphan Drug ,Cancer Genomics ,Ovarian Cancer ,Precision Medicine ,Human Genome ,Cancer ,2.1 Biological and endogenous factors ,Humans ,Female ,Ovarian Neoplasms ,BRCA2 Protein ,BRCA1 Protein ,Cystadenocarcinoma ,Serous ,Retinoblastoma Binding Proteins ,Prognosis ,Ubiquitin-Protein Ligases ,Neoplasm Grading ,Lymphocytes ,Tumor-Infiltrating ,Middle Aged ,Germ-Line Mutation ,Gene Expression Regulation ,Neoplastic ,Aged ,Biomarkers ,Tumor ,CD8-Positive T-Lymphocytes ,Australian Ovarian Cancer Study Group ,Oncology & Carcinogenesis ,Clinical sciences ,Oncology and carcinogenesis - Abstract
PurposeThe purpose of this study was to evaluate RB1 expression and survival across ovarian carcinoma histotypes and how co-occurrence of BRCA1 or BRCA2 (BRCA) alterations and RB1 loss influences survival in tubo-ovarian high-grade serous carcinoma (HGSC).Experimental designRB1 protein expression was classified by immunohistochemistry in ovarian carcinomas of 7,436 patients from the Ovarian Tumor Tissue Analysis consortium. We examined RB1 expression and germline BRCA status in a subset of 1,134 HGSC, and related genotype to overall survival (OS), tumor-infiltrating CD8+ lymphocytes, and transcriptomic subtypes. Using CRISPR-Cas9, we deleted RB1 in HGSC cells with and without BRCA1 alterations to model co-loss with treatment response. We performed whole-genome and transcriptome data analyses on 126 patients with primary HGSC to characterize tumors with concurrent BRCA deficiency and RB1 loss.ResultsRB1 loss was associated with longer OS in HGSC but with poorer prognosis in endometrioid ovarian carcinoma. Patients with HGSC harboring both RB1 loss and pathogenic germline BRCA variants had superior OS compared with patients with either alteration alone, and their median OS was three times longer than those without pathogenic BRCA variants and retained RB1 expression (9.3 vs. 3.1 years). Enhanced sensitivity to cisplatin and paclitaxel was seen in BRCA1-altered cells with RB1 knockout. Combined RB1 loss and BRCA deficiency correlated with transcriptional markers of enhanced IFN response, cell-cycle deregulation, and reduced epithelial-mesenchymal transition. CD8+ lymphocytes were most prevalent in BRCA-deficient HGSC with co-loss of RB1.ConclusionsCo-occurrence of RB1 loss and BRCA deficiency was associated with exceptionally long survival in patients with HGSC, potentially due to better treatment response and immune stimulation.
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- 2024
50. Clinical benefit, reimbursement outcomes, and prices of FDA-approved cancer drugs reviewed through Project Orbis in the USA, Canada, England, and Scotland: a retrospective, comparative analysis
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Jenei, Kristina, Gentilini, Arianna, Haslam, Alyson, and Prasad, Vinay
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Biomedical and Clinical Sciences ,Oncology and Carcinogenesis ,Cancer ,6.1 Pharmaceuticals ,Good Health and Well Being ,Humans ,Drug Approval ,Retrospective Studies ,United States ,Antineoplastic Agents ,Canada ,United States Food and Drug Administration ,Neoplasms ,Technology Assessment ,Biomedical ,Drug Costs ,Scotland ,England ,Cost-Benefit Analysis ,Oncology & Carcinogenesis ,Oncology and carcinogenesis - Abstract
BackgroundProject Orbis is a global initiative that aims to streamline regulatory review processes across international regulators in the USA, Canada, Australia, UK, Israel, Brazil, Singapore, and Switzerland to bring promising cancer drugs to patients earlier. We explored the clinical benefit, time to regulatory approval and health technology assessment recommendations, reimbursement outcomes, and monthly treatment prices of cancer drugs reviewed through this initiative.MethodsFor this retrospective, comparative analysis, we identified cancer drug approvals reviewed through Project Orbis in the USA, Canada, and the UK between May 1, 2019, and Nov 1, 2023. Approvals of cancer drugs reviewed Project Orbis were extracted from the Food and Drug Administration (FDA) Oncology Centre of Excellence and all other FDA approvals from the Drugs@FDA database. The co-primary outcomes were time of regulatory review, time from regulatory approval to health technology assessment recommendation (England, Scotland, and Canada), reimbursement outcomes, clinical benefit (defined as median gains in progression-free survival and overall survival) between cancer drug approvals reviewed by Project Orbis and other FDA approval processes, and monthly treatment prices. The Wilcoxon rank-sum and Fisher's Exact tests were used to examine statistical significance between approvals reviewed through Project Orbis and other FDA approvals during the same period.FindingsBetween May 1, 2019 and Nov 1, 2023, 81 (33%) of 244 cancer drugs approved by the FDA were reviewed through Project Orbis. The median overall survival gains were 4·1 months (IQR 3·3-5·1) compared with 2·7 months (2·1-3·9) for other FDA approvals. Similarly, progression-free survival gains were 2·6 months (IQR 1·7-4·9) for Project Orbis compared with 2·6 months (0·6-5·1) for other FDA approvals. Neither overall survival (p=0·11) nor progression-free survival (p=0·44) gains were significantly different between the two cohorts of approvals. Of the 14 UK Medicines and Healthcare products Regulatory Agency (MHRA) approvals reviewed by the Scottish Medicines Consortium (SMC), the agency gave positive recommendations for all 14 (100%). Of the 15 MHRA approvals reviewed by the National Institute for Health and Care Excellence (NICE), the agency gave positive recommendations for six (40%). Of the 49 approvals reviewed by the Canadian Agency for Drugs and Technologies in Health (CADTH), the agency conditionally recommended 44 (90%). The time between regulatory approval to NICE recommendation increased from a median of 137 days (IQR 102-172) in 2021 to 302 days (184-483) in 2023, SMC recommendation increased from 185 days (in 2021 for one drug only) to 368 days (IQR 313-476) in 2023, and CADTH decision increased from 97 days (in 2020 for one drug only) to 202 days (IQR 153-304) in 2023. The median monthly price of approvals reviewed through Project Orbis was US$20 000 per month (IQR 13 000-37 000).InterpretationClinical outcomes of Project Orbis were no different than other FDA approvals during the same time, and access, after a successful health technology assessment, was considerably delayed or absent, raising questions about whether Project Orbis participation translates into faster patient access to medicines with high clinical benefit and sustainable costs. Although future challenges might benefit from regulatory harmonisation, the advantages are currently unclear.FundingNone.
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- 2024
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