775 results on '"Gan B"'
Search Results
402. Navigating ferroptosis via an NADPH sensor.
- Author
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Mao C and Gan B
- Subjects
- Cyclohexylamines, Iron, NADP, Ferroptosis
- Published
- 2022
- Full Text
- View/download PDF
403. Unveiling the Growth of Polyamide Nanofilms at Water/Organic Free Interfaces: Toward Enhanced Water/Salt Selectivity.
- Author
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Zhou S, Long L, Yang Z, So SL, Gan B, Guo H, Feng SP, and Tang CY
- Subjects
- Filtration methods, Membranes, Artificial, Polymerization, Nylons, Water
- Abstract
The permeance and selectivity of a reverse osmosis (RO) membrane are governed by its ultrathin polyamide film, yet the growth of this critical film during interfacial polymerization (IP) has not been fully understood. This study investigates the evolution of a polyamide nanofilm at the aqueous/organic interface over time. Despite its thickness remaining largely constant (∼15 nm) for the IP reaction time ranging from 0.5 to 60 min, the density of the polyamide nanofilm increased from 1.25 to 1.36 g cm
-3 due to the continued reaction between diffused m -phenylenediamine and dangling acyl chloride groups within the formed polyamide film. This continued growth of the polyamide nanofilm led to a simultaneous increase in its crosslinking degree (from 50.1 to 94.3%) and the healing of nanosized defects, resulting in a greatly enhanced rejection of 99.2% for NaCl without sacrificing water permeance. Using humic acid as a molecular probe for sealing membrane defects, the relative contributions of the increased crosslinking and reduced defects toward better membrane selectivity were resolved, which supports our conceptual model involving both enhanced size exclusion and healed defects. The fundamental insights into the growth mechanisms and the structure-property relationship of the polyamide nanofilm provide crucial guidance for the further development and optimization of high-performance RO membranes.- Published
- 2022
- Full Text
- View/download PDF
404. PKCβII-ACSL4 pathway mediating ferroptosis execution and anti-tumor immunity.
- Author
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Lei G, Horbath A, Li Z, and Gan B
- Subjects
- Cell Line, Tumor, Humans, Protein Kinase C beta, Ferroptosis
- Published
- 2022
- Full Text
- View/download PDF
405. Targeting ferroptosis as a vulnerability in cancer.
- Author
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Lei G, Zhuang L, and Gan B
- Subjects
- Apoptosis, Cell Death, Humans, Iron metabolism, Iron therapeutic use, Ferroptosis, Neoplasms metabolism
- Abstract
Ferroptosis is an iron-dependent form of regulated cell death that is triggered by the toxic build-up of lipid peroxides on cellular membranes. In recent years, ferroptosis has garnered enormous interest in cancer research communities, partly because it is a unique cell death modality that is mechanistically and morphologically different from other forms of cell death, such as apoptosis, and therefore holds great potential for cancer therapy. In this Review, we summarize the current understanding of ferroptosis-inducing and ferroptosis defence mechanisms, dissect the roles and mechanisms of ferroptosis in tumour suppression and tumour immunity, conceptualize the diverse vulnerabilities of cancer cells to ferroptosis, and explore therapeutic strategies for targeting ferroptosis in cancer., (© 2022. Springer Nature Limited.)
- Published
- 2022
- Full Text
- View/download PDF
406. A ferroptosis defense mechanism mediated by glycerol-3-phosphate dehydrogenase 2 in mitochondria.
- Author
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Wu S, Mao C, Kondiparthi L, Poyurovsky MV, Olszewski K, and Gan B
- Subjects
- Cell Line, Tumor, Humans, Phospholipid Hydroperoxide Glutathione Peroxidase metabolism, Ferroptosis genetics, Glycerolphosphate Dehydrogenase antagonists & inhibitors, Glycerolphosphate Dehydrogenase genetics, Glycerolphosphate Dehydrogenase metabolism, Lipid Peroxidation genetics, Mitochondria enzymology, Mitochondrial Proteins genetics, Mitochondrial Proteins metabolism, Neoplasms enzymology, Neoplasms pathology
- Abstract
Mechanisms of defense against ferroptosis (an iron-dependent form of cell death induced by lipid peroxidation) in cellular organelles remain poorly understood, hindering our ability to target ferroptosis in disease treatment. In this study, metabolomic analyses revealed that treatment of cancer cells with glutathione peroxidase 4 (GPX4) inhibitors results in intracellular glycerol-3-phosphate (G3P) depletion. We further showed that supplementation of cancer cells with G3P attenuates ferroptosis induced by GPX4 inhibitors in a G3P dehydrogenase 2 (GPD2)-dependent manner; GPD2 deletion sensitizes cancer cells to GPX4 inhibition-induced mitochondrial lipid peroxidation and ferroptosis, and combined deletion of GPX4 and GPD2 synergistically suppresses tumor growth by inducing ferroptosis in vivo. Mechanistically, inner mitochondrial membrane-localized GPD2 couples G3P oxidation with ubiquinone reduction to ubiquinol, which acts as a radical-trapping antioxidant to suppress ferroptosis in mitochondria. Taken together, these results reveal that GPD2 participates in ferroptosis defense in mitochondria by generating ubiquinol.
- Published
- 2022
- Full Text
- View/download PDF
407. Exploring Acrylamide and 5-Hydroxymethylfurfural Formation in Glucose-Asparagine-Linoleic Acid System With a Kinetic Model Approach.
- Author
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Ma Y, Long Y, Li F, Zhang Y, Gan B, Yu Q, Xie J, and Chen Y
- Abstract
In the "glucose-asparagine-linoleic acid" ternary system, a kinetic model approach was used to explore formation and elimination law of target hazards, including acrylamide (AA) and 5-hydroxymethylfurfural (5-HMF), and their related precursors and intermediate products. The results showed that the elimination of glucose and asparagine and the formation of fructose (generated from glucose isomerization), 3-deoxyglucosone (3-DG), methylglyoxal (MGO), and glyoxal (GO), AA and 5-HMF followed first-order reaction kinetics with high fit coefficients (R
2 > 0.9). In addition, the kinetic reaction rate constants increased as the increasing temperature, and all models followed the Arrhenius law. Results of statistical correlations analysis suggested that at lower temperature, the generic amino acid route and the specific amino acid route may paly crucial roles for the formation of AA and 5-HMF, while at high temperature a linoleic acid pathway may be predominantly involved., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Ma, Long, Li, Zhang, Gan, Yu, Xie and Chen.)- Published
- 2022
- Full Text
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408. Reactive Oxygen Species Distribution Involved in Stipe Gradient Elongation in the Mushroom Flammulina filiformis .
- Author
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Yan J, Chekanova J, Liu Y, Gan B, Long Y, Han X, Tong Z, Miao J, Lian L, Xie B, and Liu F
- Subjects
- Hydrogen Peroxide, Reactive Oxygen Species, Agaricales genetics, Flammulina genetics
- Abstract
The mushroom stipe raises the pileus above the substrate into a suitable position for dispersing spores. The stipe elongates at different speeds along its length, with the rate of elongation decreasing in a gradient from the top to the base. However, the molecular mechanisms underlying stipe gradient elongation are largely unknown. Here, we used the model basidiomycete mushroom Flammulina filiformis to investigate the mechanism of mushroom stipe elongation and the role of reactive oxygen species (ROS) signaling in this process. Our results show that O
2 - and H2 O2 exhibit opposite gradient distributions in the stipe, with higher O2 - levels in the elongation region (ER), and higher H2 O2 levels in the stable region (SR). Moreover, NADPH-oxidase-encoding genes are up-regulated in the ER, have a function in producing O2 - , and positively regulate stipe elongation. Genes encoding manganese superoxide dismutase (MnSOD) are up-regulated in the SR, have a function in producing H2 O2, and negatively regulate stipe elongation. Altogether, our data demonstrate that ROS (O2 - /H2 O2 ) redistribution mediated by NADPH oxidase and MnSODs is linked to the gradient elongation of the F. filiformis stipe.- Published
- 2022
- Full Text
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409. [An Overview and Interpretation of Important Clinical Studies on Non-small Cell Lung Cancer in 2021].
- Author
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Gan B, Liu S, and Wu Y
- Subjects
- Combined Modality Therapy, Humans, Immunotherapy, Quality of Life, Carcinoma, Non-Small-Cell Lung drug therapy, Carcinoma, Non-Small-Cell Lung surgery, Lung Neoplasms drug therapy, Lung Neoplasms surgery
- Abstract
Though the coronavirus disease is still raging in 2021, clinical research on non-small cell lung cancer (NSCLC) did not stop. However, benefiting from advances in lung cancer treatment modality, NSCLC patients have experienced significant improvements in overall survival and quality of life. Currently, research advances on targeted therapy and immunotherapy have together transformed the status of postoperative adjuvant therapy and established a new standard treatment modality for resectable NSCLC. There are equally important research advances in locally advanced and advanced NSCLC, including new treatment modalities, new therapeutic agents, etc., all of which bringing more options for clinical treatment. These therapies will bring changes to NSCLC and will gradually lead to the chronicity of lung cancer in the foreseeable future. Therefore, this paper reviews important studies that will change clinical practice in NSCLC treatment and noteworthy research advances in 2021. .
- Published
- 2022
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410. Ferroptosis as an important driver of lupus.
- Author
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Mao C, Lei G, Zhuang L, and Gan B
- Subjects
- Ferroptosis
- Published
- 2022
- Full Text
- View/download PDF
411. ACSL4, PUFA, and ferroptosis: new arsenal in anti-tumor immunity.
- Author
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Gan B
- Subjects
- Cell Line, Tumor, Ferroptosis genetics
- Published
- 2022
- Full Text
- View/download PDF
412. A targetable CoQ-FSP1 axis drives ferroptosis- and radiation-resistance in KEAP1 inactive lung cancers.
- Author
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Koppula P, Lei G, Zhang Y, Yan Y, Mao C, Kondiparthi L, Shi J, Liu X, Horbath A, Das M, Li W, Poyurovsky MV, Olszewski K, and Gan B
- Subjects
- Humans, Kelch-Like ECH-Associated Protein 1 genetics, Kelch-Like ECH-Associated Protein 1 metabolism, Lipid Peroxidation, NF-E2-Related Factor 2 genetics, NF-E2-Related Factor 2 metabolism, Apoptosis Regulatory Proteins genetics, Apoptosis Regulatory Proteins metabolism, Ferroptosis genetics, Lung Neoplasms genetics, Lung Neoplasms radiotherapy, Mitochondrial Proteins genetics, Mitochondrial Proteins metabolism, Ubiquinone genetics, Ubiquinone metabolism
- Abstract
Targeting ferroptosis, a unique cell death modality triggered by unrestricted lipid peroxidation, in cancer therapy is hindered by our incomplete understanding of ferroptosis mechanisms under specific cancer genetic contexts. KEAP1 (kelch-like ECH associated protein 1) is frequently mutated or inactivated in lung cancers, and KEAP1 mutant lung cancers are refractory to most therapies, including radiotherapy. In this study, we identify ferroptosis suppressor protein 1 (FSP1, also known as AIFM2) as a transcriptional target of nuclear factor erythroid 2-related factor 2 (NRF2) and reveal that the ubiquinone (CoQ)-FSP1 axis mediates ferroptosis- and radiation- resistance in KEAP1 deficient lung cancer cells. We further show that pharmacological inhibition of the CoQ-FSP1 axis sensitizes KEAP1 deficient lung cancer cells or patient-derived xenograft tumors to radiation through inducing ferroptosis. Together, our study identifies CoQ-FSP1 as a key downstream effector of KEAP1-NRF2 pathway and as a potential therapeutic target for treating KEAP1 mutant lung cancers., (© 2022. The Author(s).)
- Published
- 2022
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413. Structural insights into sphingosine-1-phosphate receptor activation.
- Author
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Yu L, He L, Gan B, Ti R, Xiao Q, Hu H, Zhu L, Wang S, and Ren R
- Subjects
- Colitis, Ulcerative drug therapy, Cryoelectron Microscopy, GTP-Binding Protein alpha Subunits, Gi-Go chemistry, Humans, Immunosuppressive Agents therapeutic use, Multiple Sclerosis drug therapy, Organophosphates chemistry, Organophosphates pharmacology, Organophosphates therapeutic use, Protein Binding, Protein Conformation, alpha-Helical, Sphingosine analogs & derivatives, Sphingosine chemistry, Sphingosine pharmacology, Sphingosine therapeutic use, Sphingosine 1 Phosphate Receptor Modulators chemistry, Sphingosine 1 Phosphate Receptor Modulators pharmacology, Sphingosine 1 Phosphate Receptor Modulators therapeutic use, Sphingosine-1-Phosphate Receptors agonists, Sphingosine-1-Phosphate Receptors chemistry
- Abstract
As a critical sphingolipid metabolite, sphingosine-1-phosphate (S1P) plays an essential role in immune and vascular systems. There are five S1P receptors, designated as S1PR1 to S1PR5, encoded in the human genome, and their activities are governed by endogenous S1P, lipid-like S1P mimics, or nonlipid-like therapeutic molecules. Among S1PRs, S1PR1 stands out due to its nonredundant functions, such as the egress of T and B cells from the thymus and secondary lymphoid tissues, making it a potential therapeutic target. However, the structural basis of S1PR1 activation and regulation by various agonists remains unclear. Here, we report four atomic resolution cryo-electron microscopy (cryo-EM) structures of Gi-coupled human S1PR1 complexes: bound to endogenous agonist d18:1 S1P, benchmark lipid-like S1P mimic phosphorylated Fingolimod [(S)-FTY720-P], or nonlipid-like therapeutic molecule CBP-307 in two binding modes. Our results revealed the similarities and differences of activation of S1PR1 through distinct ligands binding to the amphiphilic orthosteric pocket. We also proposed a two-step “shallow to deep” transition process of CBP-307 for S1PR1 activation. Both binding modes of CBP-307 could activate S1PR1, but from shallow to deep transition may trigger the rotation of the N-terminal helix of Gαi and further stabilize the complex by increasing the Gαi interaction with the cell membrane. We combine with extensive biochemical analysis and molecular dynamic simulations to suggest key steps of S1P binding and receptor activation. The above results decipher the common feature of the S1PR1 agonist recognition and activation mechanism and will firmly promote the development of therapeutics targeting S1PRs.
- Published
- 2022
- Full Text
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414. Mid-mantle water transportation implied by the electrical and seismic properties of ε-FeOOH.
- Author
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Zhuang Y, Gan B, Cui Z, Tang R, Tao R, Hou M, Jiang G, Popescu C, Garbarino G, Zhang Y, and Hu Q
- Abstract
Water in the mantle transition zone and the core-mantle boundary plays a key role in Earth's stratification, volatile cycling, and core formation. If water transportation is actively running between the aforementioned layers, the lower mantle should contain water channels with distinctive seismic and/or electromagnetic signatures. Here, we investigated the electrical conductivity and sound velocity of ε-FeOOH up to 71 GPa and 1800 K and compared them with global tomography data. An abrupt three-order jump of electrical conductivity was observed above 50 GPa, reaching 1.24(12) × 10
3 S/m at 61 GPa. Meanwhile, the longitudinal sound velocity dropped by 16.8% in response to the high-to-low spin transition of Fe3+ . The high-conductivity and low-sound velocity of ε-FeOOH match the features of heterogenous scatterers in the mid-lower mantle. Such unique properties of hydrous ε-FeOOH, or possibly other Fe-enriched phases can be detected as evidence of active water transportation in the mid-lower mantle., Competing Interests: Conflict of interest The authors declare that they have no conflict of interest., (Copyright © 2021 Science China Press. Published by Elsevier B.V. All rights reserved.)- Published
- 2022
- Full Text
- View/download PDF
415. Iron out KRAS-driven cancer.
- Author
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Lei G and Gan B
- Subjects
- Humans, Neoplasms genetics, Proto-Oncogene Proteins p21(ras) genetics
- Abstract
How to specifically target oncogenic KRAS-driven cancers while sparing normal tissues remains an unmet need in cancer therapy. In this issue of JEM, Jiang et al. (2022. J. Exp. Med.https://doi.org/10.1084/jem.20210739) leveraged KRAS-induced iron addiction in cancer cells to design a clever drug delivery approach to enable selective inhibition of KRAS signaling in mutant KRAS tumors but not in normal tissues, offering a new strategy for treating this largely incurable disease., (© 2022 Lei and Gan.)
- Published
- 2022
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416. Psychoactive Effects of Lactobacillus johnsonii BS15 on Preventing Memory Dysfunction Induced by Acute Ethanol Exposure Through Modulating Intestinal Microenvironment and Improving Alcohol Metabolic Level.
- Author
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Sun N, Zhu B, Xin J, Li L, Gan B, Cao X, Fang J, Pan K, Jing B, Zeng Y, Lv C, Zhao L, Zeng D, Xu P, Wang H, and Ni X
- Abstract
The negative effects of ethanol (EtOH) abuse on the body have been widely reported in recent years. Building on the microbiota-gut-brain axis hypothesis, our study aimed to demonstrate the potential psychobiotic role of Lactobacillus johnsonii BS15 in the preventive effects of acute EtOH intake on memory impairment. We also determined whether L. johnsonii BS15 intake could effectively improve resistance to acute drinking and alleviate the adverse effects of EtOH. Male mice were fed L. johnsonii BS15 orally with (Probiotic group) or without (Control and Alcohol groups) daily dose of 0.2 × 10
9 CFU/ml per mouse for 28 days. Gavage with L. johnsonii BS15 significantly modified the ileal microbial ecosystem (assessed by 16S rRNA gene sequencing) in favor of Firmicutes and Lactobacillus , indicating the ability of BS15 to restore the gut microbiota. The acute EtOH exposure model (7 g/kg EtOH per mice) was established by gavage, which was administered to the alcohol and probiotic groups on day 28 of the experiment. The L. johnsonii BS15 intake effectively reduced alcohol unconsciousness time, blood alcohol concentration, and serum aspartate aminotransferase (AST) and alanine aminotransferase (ALT) levels. Meanwhile, the improvement of ethanol resistance time and the activities of alcohol dehydrogenase (ADH) and aldehyde dehydrogenase (ALDH) in the liver were shown by BS15 in acute alcohol-induced mice. We found that acute EtOH exposure reduced the exploration ratio (assessed by the novel object recognition test), escape latency, number of errors (assessed by passive avoidance test), and spontaneous exploration (assessed by T-maze test) in mice, which were obviously improved by L. johnsonii BS15. In the hippocampus, L. johnsonii BS15 significantly reversed the decrease in antioxidant capacity of superoxide dismutase (SOD), malondialdehyde (MDA), and glutathione (GSH) and mRNA expression of memory-related functional proteins of brain-derived neurotrophic factor (BDNF) and cyclic ampresponse element binding protein (CREB) in the hippocampal tissue after acute EtOH exposure. In conclusion, L. johnsonii BS15 intake appears as a promising psychoactive therapy to ameliorate alcohol-mediated memory impairment by increasing EtOH metabolic levels., Competing Interests: JX and HW were employed by the Guangzhou Beneco Biotechnology Co., Ltd. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Sun, Zhu, Xin, Li, Gan, Cao, Fang, Pan, Jing, Zeng, Lv, Zhao, Zeng, Xu, Wang and Ni.)- Published
- 2022
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417. Dietary Probiotic Supplementation Suppresses Subclinical Necrotic Enteritis in Broiler Chickens in a Microbiota-Dependent Manner.
- Author
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Zhao Y, Zeng Y, Zeng D, Wang H, Sun N, Xin J, Zhou M, Yang H, Lei L, Ling H, Khalique A, Rajput DS, Gan B, Wan Z, Yao Z, Fang J, Pan K, Shu G, Jing B, Zhang D, and Ni X
- Subjects
- Animals, Anti-Bacterial Agents, Chickens, Clostridium Infections prevention & control, Clostridium Infections veterinary, Enteritis prevention & control, Enteritis veterinary, Enterocolitis, Necrotizing, Microbiota, Poultry Diseases prevention & control, Probiotics
- Abstract
Background: Chicken meat is one of the most consumed meats worldwide and poultry production is increasing at an exponential rate. Reducing antibiotic usage has resulted in the recurrence of subclinical necrotic enteritis again and influenced global poultry production. Probiotics are potential antibiotic substitutes that can be used to prevent subclinical necrotic enteriti. However, the precise mechanism of action of probiotics and information on which gut microbes confer this efficacy remain elusive., Methods and Results: The subclinical necrotic enteritis animal model was used to reveal the mechanism underlying the effect of probiotics on intestinal health through RNA sequencing and 16S rDNA amplicon sequencing. Bacillus licheniformis H2 feeding significantly reduced the relative abundance of Clostridium perfringens in the ileum and markedly ameliorated the pathological damage in the ileum and liver. In addition, oral administration of B. licheniformis H2 contributed to the enhancement of the intestinal barrier function and epithelial renewal, reducing energy consumption, and improving enteral nutrition absorption. Probiotic B. licheniformis H2 also ameliorated the inflammatory response and increased the immunity of subclinical necrotic enteritis infected broilers. Finally, B. licheniformis H2 feeding regulated liver gene expression to suppress immune response and promoted growth and metabolism depending on the gut microbiota., Conclusions: These results indicated the mechanism of probiotic action of B. licheniformis H2 in maintaining intestinal health and thus promoting growth and B. licheniformis H2 may serve as an antibiotic substitute to prevent subclinical necrotic enteritis in poultry farming., Competing Interests: Author HY and LL were employed by the Chengdu Slan Biotechnology Co., Ltd. Author HL was employed by the Qingdao Vland Biotech Inc. The remaining authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Zhao, Zeng, Zeng, Wang, Sun, Xin, Zhou, Yang, Lei, Ling, Khalique, Rajput, Gan, Wan, Yao, Fang, Pan, Shu, Jing, Zhang and Ni.)
- Published
- 2022
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418. A Novel Third-generation EGFR Tyrosine Kinase Inhibitor Abivertinib for EGFR T790M-mutant Non-Small Cell Lung Cancer: a Multicenter Phase I/II Study.
- Author
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Zhou Q, Wu L, Hu P, An T, Zhou J, Zhang L, Liu XQ, Luo F, Zheng X, Cheng Y, Yang N, Li J, Feng J, Han B, Song Y, Wang K, Zhang L, Fang J, Zhao H, Shu Y, Lin XY, Chen Z, Gan B, Xu WH, Tang W, Zhang X, Yang JJ, Xu X, and Wu YL
- Subjects
- Adult, ErbB Receptors genetics, Humans, Mutation, Point Mutation, Carcinoma, Non-Small-Cell Lung drug therapy, Carcinoma, Non-Small-Cell Lung genetics, Lung Neoplasms drug therapy, Lung Neoplasms genetics, Protein Kinase Inhibitors adverse effects, Pyrimidines adverse effects
- Abstract
Purpose: To establish recommended phase II dose (RP2D) in phase I and evaluate safety and efficacy of abivertinib in patients with EGFR Thr790Met point mutation (T790M)-positive(+) non-small cell lung cancer (NSCLC) with disease progression from prior EGFR inhibitors in phase II., Patients and Methods: This multicenter, open-label study included 367 adult Chinese patients. Abivertinib at doses of 50 mg twice a day to 350 mg twice a day was evaluated in phase I in continual 28-day cycles, and the RP2D of 300 mg twice a day was used in phase II in continual 21-day cycles. Primary endpoints include RP2D in phase I and objective response rate (ORR) at RP2D in phase II., Results: The RP2D of 300 mg twice a day for abivertinib was established based on pharmacokinetics, efficacy, and safety profiles across doses in phase I. In phase II, 227 patients received RP2D for a median treatment duration of 24.6 weeks (0.43-129). Among 209 response-evaluable patients, confirmed ORR was 52.2% [109/209; 95% confidence interval (CI): 45.2-59.1]. Disease control rate (DCR) was 88.0% (184/209; 95% CI: 82.9-92.1). The median duration of response (DoR) and progression-free survival (PFS) was 8.5 months (95% CI: 6.1-9.2) and 7.5 months (95% CI: 6.0-8.8), respectively. The median overall survival (OS) was 24.9 months [95% CI: 22.4-not reachable (NR)]. All (227/227) patients reported at least 1 adverse event (AE), with 96.9% (220/227) of treatment-related AEs. Treatment-related serious AEs were reported in 13.7% (31/227) of patients. Death was reported in 4.4% (10/227) of patients, and none was deemed as treatment-related., Conclusions: Abivertinib of 300 mg twice a day demonstrated favorable clinical efficacy with manageable side effects in patients with EGFR T790M+ NSCLC., (©2021 The Authors; Published by the American Association for Cancer Research.)
- Published
- 2022
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419. Effects of Nitrogen and Phosphorus Addition on Soil Extracellular Enzyme Activity and Stoichiometry in Chinese Fir ( Cunninghamia lanceolata ) Forests.
- Author
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Liu M, Gan B, Li Q, Xiao W, and Song X
- Abstract
Soil extracellular enzymes play an important role in microbial functions and soil nutrient cycling in the context of increasing N deposition globally. This is particularly important for Chinese fir ( Cunninghamia lanceolata ) forests because of the decline in soil fertility induced by successive rotation. In this study, we aimed to determine the effects of simulated N deposition (N30: 30 kg ha
-2 year-1 ; N60: 60 kg ha-2 year-1 ) and phosphorus addition (P20: 20 mg kg-1 ; P40: 40 mg kg-1 ) on the activity and stoichiometry of soil extracellular enzymes related to soil C, N, and P cycling in Chinese fir. The results showed that N addition alone increased the activity of soil β-1,4 glucosidase (BG) but decreased the activity of N -acetyl-β-d-glucosidase (NAG) and leucine aminopeptidase (LAP). N addition increased the ratios of soil enzymes, C:N and C:P, alleviated microbial N-limitation, and aggravated microbial C-limitation. P addition alone increased enzyme activity, and P40 addition increased the ratio of BG to soil microbial biomass carbon (MBC), and (NAG + LAP):MBC activity ratio, thereby aggravating C restriction. N and P co-addition significantly affected soil extracellular enzyme activity and stoichiometry. For instance, BG activity and BG:MBC activity ratio increased significantly under the N30 + P40 treatment, which intensified C-limitation. Soil pH was the main factor influencing enzyme activity, and these variables were positively correlated. The stoichiometric relationships of enzyme reactions were coupled with soil pH, total nitrogen (TN), and available phosphorus (AP). Our results indicate that changes in soil characteristics induced by N and P inputs influence the activities of soil microorganisms and result in changes in microbial resource acquisition strategies. This study provides useful insights into the development of management strategies to improve the productivity of Chinese fir forests under scenarios of increasing N deposition., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Liu, Gan, Li, Xiao and Song.)- Published
- 2022
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420. Cell membrane-coated biomimetic magnetic nanoparticles for the bio-specific extraction of components from Gualou Guizhi decoction exhibiting activities against oxygen-glucose deprivation/reperfusion injury.
- Author
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He D, Wang P, Liao F, Yu L, and Gan B
- Subjects
- Animals, Biomimetics, Cell Membrane, Endothelial Cells, Glucose, Oxygen, Rats, Rats, Sprague-Dawley, Drugs, Chinese Herbal pharmacology, Magnetite Nanoparticles, Reperfusion Injury drug therapy
- Abstract
Gua-Lou-Gui-Zhi decoction (GLGZD) is a classical multiherb traditional Chinese medicine formula that has ameliorative effects on oxygen-glucose deprivation/reperfusion (OGD/R) injury and has been applied for the treatment of stroke in clinical practice; however, its active ingredients remain unknown. The aim of this study was to develop an effective method for screening for components of GLGZD with potential therapeutic activity against OGD/R injury. Brain microvascular endothelial cell membrane-coated magnetic beads (CMs@rBMECs-MBs) were incubated with the GLGZD extract; the bound material was eluted and the constituents were identified using solid phase extraction and ultra-performance liquid chromatography-Orbitrap Fusion Tribrid mass spectrometry (UPLC-Orbitrap Fusion Tribrid MS). The biological activities of the identified GLGZD components were analyzed using OGD/R-exposed brain endothelial cells. Seven compounds bound to the CMs@rBMECs-MBs were identified as gallic acid, paeoniflorin, liquiritigenin, isoliquiritigenin, liquiritin, isoliquiritin, and formononetin. Among them, six (except formononetin) protected brain endothelial cells against OGD/R injury in a concentration-dependent manner (20-120 μM; P < 0.01-0.05) and downregulated the expression of hypoxia-inducible factor-1α (P < 0.01) involved in the pathogenic mechanisms triggered by stroke. Our findings suggest that the screening of bioactive compounds using cell membrane-coated magnetic beads combined with solid phase extraction and UPLC-Orbitrap Fusion Tribrid MS is an effective method for the bio-specific extraction and identification of ingredients responsible for the therapeutic activity of traditional Chinese medicines., Competing Interests: Declaration of Competing Interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (Copyright © 2021 Elsevier B.V. All rights reserved.)
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- 2022
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421. The Value of Prenatal First Systolic Blood Pressure Can Predict Severe Preeclampsia and Birth Weight in Patients With Preeclampsia.
- Author
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Gan B, Wu X, Lu L, Li X, and Li J
- Abstract
Background: Preeclampsia is a serious complication of pregnancy that threatens the safety of the fetus and mother. We assessed the relationship between systolic blood pressure (SBP) in the early pregnancy stage (12 weeks) in patients with preeclampsia and the development of severe eclampsia and birth weight., Methods: Patients were categorized based on the quartiles of the prenatal first SBP level. Logistic regression analysis was performed to assess whether prenatal first SBP was a risk factor for low birth weight and severe preeclampsia. The area under the receiver-operating characteristic curve (AUC) of sensitivity and specificity were used to predict the risk of low birth weight and severe preeclampsia., Results: A total of 333 patients with preeclampsia were enrolled. There were 162 (48.6%) patients with severe preeclampsia and 270 (81.08%) cesareans. Group I patients with a prenatal first SBP ≤ 119 mmHg prenatal had a higher birth weight. Multiple logistic regression analysis showed that serum creatinine ( p = 0.025), prenatal first SBP ( p = 0.029), S-preeclampsia ( p = 0.003), gestational age ( p < 0.001), total cholesterol (TC) ( p < 0.001), and low-density lipoprotein (LDL) ( p < 0.001) were independent risk factors for low birth weight. Multiple logistic regression analysis showed that prenatal first SBP ( p = 0.003), TC ( p = 0.002), and B-type natriuretic peptide (BNP) ( p < 0.001) were independent risk factors for severe preeclampsia. Compared with Group I (SBP ≤ 119 mmHg), the incidence of low birth weight for patients in groups III (131 ≤ SBP ≤ 138 mmHg) and IV (SBP ≥ 139 mmHg) was significantly higher. Even after correcting for age, gestational age, and biochemical indices, the difference remained statistically significant. The risk of diagnosed severe preeclampsia for patients in Groups IV (SBP ≥ 139 mmHg), III (131 ≤ SBP ≤ 138 mmHg), and II (120 ≤ SBP ≤ 130 mmHg) was significantly higher than that in Group I (SBP ≤ 119 mmHg). The AUC of the prenatal first SBP for predicting low birth weight and severe preeclampsia was 0.676 (95% CI 0.618-0.733, p < 0.001) and 0.727 (95% CI 0.673-0.781, p < 0.001), respectively, in patients with preeclampsia., Conclusions: Prenatal first SBP was associated with birth weight and severe preeclampsia. Higher prenatal first SBP in patients with preeclampsia can predict low birth weight and severe preeclampsia., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2022 Gan, Wu, Lu, Li and Li.)
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- 2022
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422. Combinatorial Investigation of the Ni-Ta System via Correlated High-Speed Nanoindentation and EDX Mapping.
- Author
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Wheeler JM, Gan B, and Spolenak R
- Abstract
Correlated high-speed nanoindentation and energy-dispersive spectroscopy are applied in a combinatorial investigation of the Ni-Ta system. All seven phases in the system are clearly resolved in the resulting maps, and the mechanical properties and composition ranges for each phase are determined. Good agreement with ab initio calculations is generally observed with some exceptions, most notably NiTa
2 . This is achieved using a simple correlation method utilizing directly overlaid data matrices to allow compositional labeling of mechanical data. This allows easy data segmentation without requiring complicated statistical deconvolution methods. Without this correlative method, phase deconvolution of the Ni-Ta system would be challenging due to several phases possessing adjacent compositions and mechanical properties. This demonstrates the potential of this new correlative approach for future investigations, particularly those involving complex microstructures and/or compositional variation., (© 2021 The Authors. Small Methods published by Wiley-VCH GmbH.)- Published
- 2022
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423. Pulsed Light Mutagenesis of the Willow Bracket Mushroom, Phellinus igniarius (Agaricomycetes), for Enhanced Production of Flavonoids, Laccase, and Fermentation Biomass.
- Author
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Dong Y, Ma H, Golly MK, Qu W, Wang B, Zhou C, Ye X, Zhang H, Gan B, Yan J, Han X, Zhao J, Feng R, Miao R, and Zhang Z
- Subjects
- Phellinus, Laccase genetics, Laccase metabolism, Flavonoids metabolism, Fermentation, Biomass, Random Amplified Polymorphic DNA Technique, Mutagenesis, Agaricales genetics, Agaricales metabolism, Salix genetics, Salix metabolism, Basidiomycota genetics, Basidiomycota metabolism
- Abstract
Phellinus igniarius is a medicinal fungus possessing potent therapeutic activity due to the polysaccharides, polyphenols, flavonoids, and other secondary metabolites they contain. Laccases are crucial enzymes involved in lignin degradation in Ph. igniarius and offer great potential to accomplish several bioprocesses. To generate Ph. igniarius strains with high biomass, flavonoid, and laccase activity, we used pulsed light (PL) technology for mutagenesis of Ph. igniarius protoplasts and screened for mutants with high biomass, flavonoid, and laccase activity. At the irradiation power of 100 J, treated distance 8.5 cm, irradiation frequency was 0.5 s/time, three times treatments, after five generations of selection, three mutants were obtained with higher biomass production. Compared with control, the mycelium biomass and the flavonoid production of the screened mutant strain QB72 were increased 20.87% and 53.51%, respectively. The total amount of the accumulated extracellular laccase of the QB72 in the first 6 and 8 days increased 23.38% and 22.37% respectively, and over the total 16 days it increased 9.62%. In addition, RAPD analysis results indicated that the genetic materials of the mutant QB72 were altered. PL mutagenesis method has great potential for developing strains, especially Phellinus.
- Published
- 2022
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424. High-throughput sequencing-based microsatellite genotyping for polyploids to resolve allele dosage uncertainty and improve analyses of genetic diversity, structure and differentiation: A case study of the hexaploid Camellia oleifera.
- Author
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Cui X, Li C, Qin S, Huang Z, Gan B, Jiang Z, Huang X, Yang X, Li Q, Xiang X, Chen J, Zhao Y, and Rong J
- Subjects
- Alleles, Genetic Variation, Genotype, Genotyping Techniques, High-Throughput Nucleotide Sequencing, Microsatellite Repeats, Uncertainty, Camellia genetics, Gene Dosage, Polyploidy
- Abstract
Conventional microsatellite (simple sequence repeat, SSR) genotyping methods cannot accurately identify polyploid genotypes leading to allele dosage uncertainty, introducing biases in population genetic analysis. Here, a new SSR genotyping method was developed to directly infer accurate polyploid genotypes. The frequency distribution of SSR sequences was obtained based on deep-coverage high-throughput sequencing data. Corrections were performed accounting for the "stutter peak" and amplification efficiency of SSR sequences. Perl scripts and an online SSR genotyping tool "SSRSeq" were provided to process the sequencing data and output genotypes with corrected allele dosages. Hexaploid Camellia oleifera is the dominant woody oilseed crop in China. Understanding the geographical pattern of genetic variation in wild C. oleifera is essential for the conservation and utilization of genetic resources. Six wild C. oleifera populations were sampled across geographical ranges in subtropical evergreen broadleaf forests of China. Using 35 SSR markers, the high-throughput sequencing-based SSRSeq method was applied to obtain accurate hexaploid genotypes of wild C. oleifera. The results demonstrated that the new method could resolve allele dosage uncertainty and considerably improve genetic diversity, structure and differentiation analyses for polyploids. The genetic variation patterns of wild C. oleifera across geographical ranges agree with the "central-marginal hypothesis", stating that genetic diversity is high in the central population and declines from the central to the peripheral populations, and genetic differentiation increases from the centre to the periphery. This method and findings can facilitate the utilization of wild C. oleifera genetic resources for the breeding of cultivated C. oleifera., (© 2021 John Wiley & Sons Ltd.)
- Published
- 2022
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425. Assessment of lipid peroxidation in irradiated cells.
- Author
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Mao C, Lei G, Horbath A, and Gan B
- Subjects
- Cell Death physiology, Cell Membrane metabolism, Lipid Peroxidation physiology, Reactive Oxygen Species metabolism, Iron metabolism
- Abstract
Lipid peroxidation occurs under conditions where reactive oxygen species (ROS) readily react with vulnerable lipids on cell membranes. Polyunsaturated fatty acids (PUFAs) are highly susceptible to lipid peroxidation because of their unstable double bonds. Because the cell membrane is particularly rich in PUFAs, it is often the site at which many lipid peroxidation chain reactions occur. Lipid peroxidation is considered the ultimate trigger of ferroptosis, an iron-dependent form of non-apoptotic cell death. Radiotherapy is a common cancer treatment that uses high-energy ionizing radiation to kill cancer cells, and radiation-induced cell death is partially attributed to lipid peroxidation-driven ferroptosis. Here, we describe methods to assess lipid peroxidation in irradiated cells. The same techniques can be applied to a variety of lipid peroxidation measurements under different treatment conditions., Competing Interests: Disclosures B.G. is an inventor on patent applications involving targeting ferroptosis in cancer therapy. Other authors declare that they have no conflict of interest., (Copyright © 2022 Elsevier Inc. All rights reserved.)
- Published
- 2022
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426. A targetable LIFR-NF-κB-LCN2 axis controls liver tumorigenesis and vulnerability to ferroptosis.
- Author
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Yao F, Deng Y, Zhao Y, Mei Y, Zhang Y, Liu X, Martinez C, Su X, Rosato RR, Teng H, Hang Q, Yap S, Chen D, Wang Y, Chen MM, Zhang M, Liang H, Xie D, Chen X, Zhu H, Chang JC, You MJ, Sun Y, Gan B, and Ma L
- Subjects
- Animals, Antibodies, Neutralizing pharmacology, Carcinogenesis genetics, Carcinoma, Hepatocellular genetics, Carcinoma, Hepatocellular pathology, Carcinoma, Hepatocellular ultrastructure, Cell Line, Tumor, Down-Regulation genetics, Gene Expression Regulation, Neoplastic, HEK293 Cells, Humans, Lipocalin-2 genetics, Liver Neoplasms genetics, Liver Neoplasms ultrastructure, Male, Mice, Inbred C57BL, Piperazines pharmacology, Protein Tyrosine Phosphatase, Non-Receptor Type 6 metabolism, Signal Transduction drug effects, Sorafenib pharmacology, Up-Regulation drug effects, Up-Regulation genetics, Xenograft Model Antitumor Assays, Mice, Carcinogenesis metabolism, Carcinogenesis pathology, Ferroptosis, Leukemia Inhibitory Factor Receptor alpha Subunit metabolism, Lipocalin-2 metabolism, Liver Neoplasms metabolism, Liver Neoplasms pathology, NF-kappa B metabolism
- Abstract
The growing knowledge of ferroptosis has suggested the role and therapeutic potential of ferroptosis in cancer, but has not been translated into effective therapy. Liver cancer, primarily hepatocellular carcinoma (HCC), is highly lethal with limited treatment options. LIFR is frequently downregulated in HCC. Here, by studying hepatocyte-specific and inducible Lifr-knockout mice, we show that loss of Lifr promotes liver tumorigenesis and confers resistance to drug-induced ferroptosis. Mechanistically, loss of LIFR activates NF-κB signaling through SHP1, leading to upregulation of the iron-sequestering cytokine LCN2, which depletes iron and renders insensitivity to ferroptosis inducers. Notably, an LCN2-neutralizing antibody enhances the ferroptosis-inducing and anticancer effects of sorafenib on HCC patient-derived xenograft tumors with low LIFR expression and high LCN2 expression. Thus, anti-LCN2 therapy is a promising way to improve liver cancer treatment by targeting ferroptosis., (© 2021. The Author(s).)
- Published
- 2021
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427. Thiol profiling in cancer cell lines by HPLC-mass spectrometry.
- Author
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Liu X, Koppula P, Olszewski K, and Gan B
- Subjects
- Cell Culture Techniques, Cell Line, Tumor, Humans, Chromatography, High Pressure Liquid methods, Metabolomics methods, Neoplasms chemistry, Neoplasms metabolism, Sulfhydryl Compounds analysis, Sulfhydryl Compounds chemistry, Sulfhydryl Compounds metabolism, Tandem Mass Spectrometry methods
- Abstract
We describe a protocol for identifying cellular thiol metabolites such as cysteine and cystine in adherent cells using high performance liquid chromatography (HPLC) tandem mass spectrometry-based metabolomics. We applied a modified extraction and sample derivatization protocol to accurately quantify the intracellular levels of labile thiol species and to inhibit oxidation prior to analysis. For complete details on the use and execution of this protocol, please refer to Liu et al. (2020) and Koppula et al. (2021)., Competing Interests: K.O. is a full-time employee of the Barer Institute. The other authors declare no competing interests., (© 2021 The Authors.)
- Published
- 2021
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428. Icariin regulates miR-23a-3p-mediated osteogenic differentiation of BMSCs via BMP-2/Smad5/Runx2 and WNT/β-catenin pathways in osteonecrosis of the femoral head.
- Author
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Zhang XY, Li HN, Chen F, Chen YP, Chai Y, Liao JZ, Gan B, Chen DP, Li S, and Liu YQ
- Abstract
Icariin is commonly used for the clinical treatment of osteonecrosis of the femoral head (ONFH). miR-23a-3p plays a vital role in regulating the osteogenic differentiation of bone marrow-derived mesenchymal stem cells (BMSCs). The present study aimed to investigate the roles of icariin and miR-23a-3p in the osteogenic differentiation of BMSCs and an ONFH model. BMSCs were isolated and cultured in vitro using icariin-containing serum at various concentrations, and BMSCs were also transfected with a miR-23a inhibitor. The alkaline phosphatase (ALP) activity and cell viability as well as BMP-2/Smad5/Runx2 and WNT/β-catenin pathway-related mRNA and protein expression were measured in BMSCs. Additionally, a dual-luciferase reporter assay and pathway inhibitors were used to verify the relationship of icariin treatment/miR-23a and the above pathways. An ONFH rat model was established in vivo, and a 28-day gavage treatment and lentivirus transfection of miR-23a-3p inhibitor were performed. Then, bone biochemical markers (ELISA kits) in serum, femoral head (HE staining and Digital Radiography, DR) and the above pathway-related proteins were detected. Our results revealed that icariin treatment/miR-23a knockdown promoted BMSC viability and osteogenic differentiation as well as increased the mRNA and protein expression of BMP-2, BMP-4, Runx2, p-Smad5, Wnt1 and β-catenin in BMSCs and ONFH model rats. In addition, icariin treatment/miR-23a knockdown increased bone biochemical markers (ACP-5, BAP, NTXI, CTXI and OC) and improved ONFH in ONFH model rats. In addition, a dual-luciferase reporter assay verified that Runx2 was a direct target of miR-23a-3p. These data indicated that icariin promotes BMSC viability and osteogenic differentiation as well as improves ONFH by decreasing miR-23a-3p levels and regulating the BMP-2/Smad5/Runx2 and WNT/β-catenin pathways., Competing Interests: The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper., (© 2021 The Author(s).)
- Published
- 2021
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429. Targeting cancer stem cells with a pan-BCL-2 inhibitor in preclinical and clinical settings in patients with gastroesophageal carcinoma.
- Author
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Song S, Chen Q, Li Y, Lei G, Scott A, Huo L, Li CY, Estrella JS, Correa A, Pizzi MP, Ma L, Jin J, Liu B, Wang Y, Xiao L, Hofstetter WL, Lee JH, Weston B, Bhutani M, Shanbhag N, Johnson RL, Gan B, Wei S, and Ajani JA
- Subjects
- Animals, Apoptosis drug effects, Cell Line, Tumor, Disease Models, Animal, Docetaxel pharmacology, Esophageal Neoplasms genetics, Female, Gossypol pharmacology, Humans, Male, Mice, Middle Aged, Pilot Projects, Proto-Oncogene Proteins c-bcl-2 genetics, Stomach Neoplasms genetics, Antineoplastic Agents, Phytogenic pharmacology, Esophageal Neoplasms drug therapy, Gossypol analogs & derivatives, Neoplastic Stem Cells drug effects, Proto-Oncogene Proteins c-bcl-2 antagonists & inhibitors, Stomach Neoplasms drug therapy
- Abstract
Objective: Gastro-oesophageal cancers (GEC) are resistant to therapy and lead to poor prognosis. The cancer stem cells (CSCs) and antiapoptotic pathways often confer therapy resistance. We sought to elucidate the antitumour action of a BCL-2 inhibitor, AT101 in GEC in vitro, in vivo and in a clinical trial., Methods: Extensive preclinical studies in vitro and in vivo were carried out to establish the mechanism action of AT101 on targeting CSCs and antiapoptotic proteins. A pilot clinical trial in patients with GEC was completed with AT-101 added to standard chemoradiation., Results: Overexpression of BCL-2 and MCL-1 was noted in gastric cancer tissues (GC). AT-101 induced apoptosis, reduced proliferation and tumour sphere formation in MCL-1/BCL-2 high GC cells. Interestingly, AT101 dramatically downregulated genes ( YAP-1/Sox9 ) that control CSCs in GEC cell lines regardless of BCL-2/MCL-1 expression. Addition of docetaxel to AT-101 amplified its antiproliferation and induced apoptosis effects. In vivo studies confirmed the combination of AT101 and docetaxel demonstrated stronger antitumour activity accompanied with significant decrease of CSCs biomarkers (YAP1/SOX9). In a pilot clinical trial, 13 patients with oesophageal cancer (EC) received AT101 orally concurrently with chemoradiation. We observed dramatic clinical complete responses and encouraging overall survival in these patients. Clinical specimen analyses revealed that AT-101 dramatically reduced the expression of CSCs genes in treated EC specimens indicating antitumour activity of AT101 relies more on its anti-CSCs activity., Conclusions: Our preclinical and clinical data suggest that AT-101 overcomes resistance by targeting CSCs pathways suggesting a novel mechanism of action of AT101 in patients with GEC., Competing Interests: Competing interests: The authors declare that there are no conflicts of interest., (© Author(s) (or their employer(s)) 2021. No commercial re-use. See rights and permissions. Published by BMJ.)
- Published
- 2021
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430. Phospholipase iPLA2β acts as a guardian against ferroptosis.
- Author
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Mao C, Lei G, Zhuang L, and Gan B
- Subjects
- Humans, Phospholipases, Ferroptosis
- Published
- 2021
- Full Text
- View/download PDF
431. Ferroptosis, radiotherapy, and combination therapeutic strategies.
- Author
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Lei G, Mao C, Yan Y, Zhuang L, and Gan B
- Subjects
- Humans, Ferroptosis immunology, Immunotherapy, Neoplasms immunology, Neoplasms therapy, Radiotherapy
- Abstract
Ferroptosis, an iron-dependent form of regulated cell death driven by peroxidative damages of polyunsaturated-fatty-acid-containing phospholipids in cellular membranes, has recently been revealed to play an important role in radiotherapy-induced cell death and tumor suppression, and to mediate the synergy between radiotherapy and immunotherapy. In this review, we summarize known as well as putative mechanisms underlying the crosstalk between radiotherapy and ferroptosis, discuss the interactions between ferroptosis and other forms of regulated cell death induced by radiotherapy, and explore combination therapeutic strategies targeting ferroptosis in radiotherapy and immunotherapy. This review will provide important frameworks for future investigations of ferroptosis in cancer therapy., (© 2021. The Author(s).)
- Published
- 2021
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432. Mitochondrial regulation of ferroptosis.
- Author
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Gan B
- Subjects
- Amino Acid Transport System y+ antagonists & inhibitors, Amino Acid Transport System y+ genetics, Amino Acid Transport System y+ metabolism, Cells, Cultured, Ferroptosis drug effects, GTP Cyclohydrolase genetics, GTP Cyclohydrolase metabolism, Gene Expression Regulation, Glutathione antagonists & inhibitors, Glutathione biosynthesis, Humans, Lipid Peroxidation drug effects, Mitochondria drug effects, Mitochondria enzymology, Oxidants pharmacology, Phospholipid Hydroperoxide Glutathione Peroxidase genetics, Phospholipid Hydroperoxide Glutathione Peroxidase metabolism, Reactive Oxygen Species agonists, Reactive Oxygen Species metabolism, S100 Calcium-Binding Protein A4 antagonists & inhibitors, S100 Calcium-Binding Protein A4 genetics, S100 Calcium-Binding Protein A4 metabolism, Signal Transduction, Ubiquinone antagonists & inhibitors, Ubiquinone metabolism, Ferroptosis genetics, GTP Cyclohydrolase antagonists & inhibitors, Iron metabolism, Mitochondria genetics, Phospholipid Hydroperoxide Glutathione Peroxidase antagonists & inhibitors, Small Molecule Libraries pharmacology
- Abstract
Ferroptosis is a form of iron-dependent regulated cell death driven by uncontrolled lipid peroxidation. Mitochondria are double-membrane organelles that have essential roles in energy production, cellular metabolism, and cell death regulation. However, their role in ferroptosis has been unclear and somewhat controversial. In this Perspective, I summarize the diverse metabolic processes in mitochondria that actively drive ferroptosis, discuss recently discovered mitochondria-localized defense systems that detoxify mitochondrial lipid peroxides and protect against ferroptosis, present new evidence for the roles of mitochondria in regulating ferroptosis, and outline outstanding questions on this fascinating topic for future investigations. An in-depth understanding of mitochondria functions in ferroptosis will have important implications for both fundamental cell biology and disease treatment., (© 2021 Gan.)
- Published
- 2021
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433. Morchella importuna Flavones Improve Intestinal Integrity in Dextran Sulfate Sodium-Challenged Mice.
- Author
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Xu Y, Xie L, Tang J, He X, Zhang Z, Chen Y, Zhou J, Gan B, and Peng W
- Abstract
Morchella importuna , as an edible fungus, has various health benefits. However, the effects of M. importuna on intestinal health are rarely investigated. Hence, this study aims to ascertain the influences of flavones from the fruiting bodies of M. importuna (hereinafter abbreviated as MIF) on dextran sulfate sodium (DSS)-induced damage to intestinal epithelial barrier in C57BL/6J mice. In this (14-day) study, 144 C57BL/6J mice were divided into four groups: (1) Control; (2) DSS treatment; (3) DSS treatment + 100 mg/kg MIF (LMIF); (4) DSS treatment + 200 mg/kg MIF (HMIF). On days 8-14, mice in the challenged groups were challenged with 3.5% DSS, while the control group received an equal volume of normal saline. Then, serum and intestinal samples were obtained from all mice. The results showed that MIF ingestion enhanced intestinal integrity in DSS-challenged mice, as evinced by the elevated ( p < 0.05) abundances of occludin, claudin-1, and zonula occludens-1 proteins. Meanwhile, MIF ingestion reduced ( p < 0.05) the colonic interleukin-1β (IL-1β), tumor necrosis factor-α (TNF-α), and interferon-γ (IFN-γ) concentrations and increased the superoxide dismutase and catalase activities and Shannon and Simpson indices in DSS-challenged mice. Moreover, MIF ingestion reduced ( p < 0.05) the abundance of phospho-nuclear factor (NF)-κB and increased the abundance of phospho-Nrf2 in DSS-challenged mice. Taken together, MIF protects against intestinal barrier injury in C57BL/6J mice via a mechanism that involves inhibiting NF-κB activation and promoting Nrf2 activation, as well as regulating intestinal microbiota., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Xu, Xie, Tang, He, Zhang, Chen, Zhou, Gan and Peng.)
- Published
- 2021
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434. Pore Structure and Movable Fluid Characteristics of Typical Sedimentary Lithofacies in a Tight Conglomerate Reservoir, Mahu Depression, Northwest China.
- Author
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Wu J, Yang S, Gan B, Cao Y, Zhou W, Kou G, Wang Z, Li Q, Dong W, and Zhao B
- Abstract
The pore structure and movable fluid characteristics of tight conglomerate reservoirs are complex, which are greatly different from conventional reservoirs. The depositional mechanism is the fundamental factor controlling the physical properties of conglomerate reservoirs. However, there is a lack of systematic research on the pore structure and movable fluid characteristics of conglomerate reservoirs with typical sedimentary facies. This paper investigates the pore structure and movable fluid characteristics of conglomerate of different sedimentary facies based on various experiments. Casting thin sections, X-ray diffraction, scanning electron microscopy, high-pressure mercury injection, and nuclear magnetic resonance experiments were conducted on 32 conglomerates samples from the Mahu Sag, Junggar Basin, China. The quality classification method of tight conglomerate reservoirs is established. The results show that the conglomerate can be divided into three sedimentary facies; traction flow conglomerate (TFC) and pebbled sandstone (PSS) mainly develop intergranular pores and dissolved pores; and the pore diameter curves are mainly a double peak, single peak, and flat peak. Gravity flow conglomerate (GFC) mainly develops dissolved pores and interstitial micropores, and the pore diameter curve is mainly a single peak. PSS includes pebbled gritty sandstone (P(G)SS) and pebbled fine sandstone (P(F)SS). TFC and P(G)SS are favorable class I reservoirs, while GFC and P(F)SS are nonfavorable class II reservoirs. A new parameter, the ratio of the major axis to the minor axis of the pore outer ellipse (axial ratio), is proposed to quantitatively describe the compaction effect. The average axial ratios of the three lithofacies are 3.04, 3.98, and 8.78, respectively, indicating that the compaction is intensified and the pore structure becomes worse. By analyzing the correlation between pore structure parameters and permeability, it is found that the main controlling factors of permeability of GFC and TFC are sorting and connectivity, respectively, and the main flow radius is the most suitable parameter to describe permeability. A linear spectral decomposition method was used to establish a new quantitative calculation method of movable fluid saturation for different types of pores, and the results show that the movable fluid saturation of intergranular pores is the highest (average: 65.43%), and the movable fluid saturation of TFC and P(G)SS with more intergranular pores is the highest. Movable fluid saturation is inversely proportional to the content of I/S and the compaction rate and positively proportional to the content of quartz and feldspar and the cementation rate. The fluid mobility of water-wet samples is weaker. The research results provide theoretical support for the identification of favorable reservoirs and the cognition of a development mechanism., Competing Interests: The authors declare no competing financial interest., (© 2021 The Authors. Published by American Chemical Society.)
- Published
- 2021
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435. Cytochrome P450 reductase (POR) as a ferroptosis fuel.
- Author
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Koppula P, Zhuang L, and Gan B
- Subjects
- Cell Membrane metabolism, Coenzyme A Ligases metabolism, Cytochrome P-450 Enzyme System metabolism, Cytochrome-B(5) Reductase genetics, Cytochrome-B(5) Reductase metabolism, Endoplasmic Reticulum metabolism, Eukaryotic Cells cytology, Eukaryotic Cells metabolism, Fatty Acids, Unsaturated metabolism, Gene Expression Regulation, Humans, Iron metabolism, Oxygen metabolism, Coenzyme A Ligases genetics, Cytochrome P-450 Enzyme System genetics, Ferroptosis genetics, Lipid Peroxidation genetics, Lipid Peroxides metabolism
- Published
- 2021
- Full Text
- View/download PDF
436. Greenhouse warming intensifies north tropical Atlantic climate variability.
- Author
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Yang Y, Wu L, Guo Y, Gan B, Cai W, Huang G, Li X, Geng T, Jing Z, Li S, Liang X, and Xie SP
- Abstract
Variability of North Tropical Atlantic (NTA) sea surface temperature (SST), characterized by a near-uniform warming at its positive phase, is a consequential mode of climate variability. Modulated by El Niño-Southern Oscillation (ENSO) and the North Atlantic Oscillation, NTA warm anomalies tend to induce La Niña events, droughts in Northeast Brazil, increased frequency of extreme hurricanes, and phytoplankton blooms in the Guinea Dome. Future changes of NTA variability could have profound socioeconomic impacts yet remain unknown. Here, we reveal a robust intensification of NTA variability under greenhouse warming. This intensification mainly arises from strengthening of ENSO-forced Pacific-North American pattern and tropospheric temperature anomalies, as a consequence of an eastward shift of ENSO-induced equatorial Pacific convection and of increased ENSO variability, which enhances ENSO influence by reinforcing the associated wind and moist convection anomalies. The intensification of NTA SST variability suggests increased occurrences of extreme NTA events, with far-reaching ramifications., (Copyright © 2021 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works. Distributed under a Creative Commons Attribution NonCommercial License 4.0 (CC BY-NC).)
- Published
- 2021
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437. Glucose starvation induces NADPH collapse and disulfide stress in SLC7A11 high cancer cells.
- Author
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Liu X and Gan B
- Abstract
Competing Interests: CONFLICTS OF INTEREST Authors have no conflicts of interest to declare.
- Published
- 2021
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438. Morchella importuna Polysaccharides Alleviate Carbon Tetrachloride-Induced Hepatic Oxidative Injury in Mice.
- Author
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Xu Y, Xie L, Tang J, He X, Zhang Z, Chen Y, Zhou J, Gan B, and Peng W
- Abstract
This study aimed to investigate the effects of Morchella importuna polysaccharides (MIPs) on carbon tetrachloride (CCl
4 )-induced hepatic damage in mice. A total of 144 female mice were randomly assigned to four treatment groups, namely, control, CCl4 , low-dose MIP (LMIP) group, and high-dose MIP (HMIP) group. After the 10-day experiment, serum and liver were sampled for biochemical and metabolomic analyses. The HMIPs markedly decreased the liver weight under CCl4 intoxication. Furthermore, the significantly elevated concentrations of five serum biochemical parameters, including alanine aminotransferase, aspartate aminotransferase, triglyceride, total cholesterol, and total bile acid under CCl4 treatment were subverted by MIP administration in a dose-dependent manner. Moreover, MIPs relieved the increased hepatic malonaldehyde and protein carbonyl content and the decreased superoxide dismutase and catalase contents caused by CCl4 intoxication. There was also a dose-dependent decrease in the CCl4 -induced inflammatory indices, such as the levels of interleukin-1, interleukin-6, tumor necrosis factor-alpha, and myeloperoxidase, with MIP administration. Subsequent ultra-high performance liquid chromatography-tandem mass spectrometry-based serum metabolomics identified nine metabolites between the control and CCl4 groups and 10 metabolites between the HMIP and CCl4 groups, including some critical metabolites involved in flavonoid biosynthesis, amino acid metabolism, energy metabolism, and toxicant degradation. These novel findings indicate that MIPs may be of therapeutic value in alleviating the oxidative stress and inflammation caused by CCl4 . Liquid chromatography-mass spectrometry-based metabolomics provides a valuable opportunity for identifying potential biomarkers and elucidating the protective mechanisms of medicinal mushrooms against hepatic oxidative injury., Competing Interests: The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest., (Copyright © 2021 Xu, Xie, Tang, He, Zhang, Chen, Zhou, Gan and Peng.)- Published
- 2021
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439. Author Correction: DHODH-mediated ferroptosis defence is a targetable vulnerability in cancer.
- Author
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Mao C, Liu X, Zhang Y, Lei G, Yan Y, Lee H, Koppula P, Wu S, Zhuang L, Fang B, Poyurovsky MV, Olszewski K, and Gan B
- Published
- 2021
- Full Text
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440. Cystine transporter SLC7A11/xCT in cancer: ferroptosis, nutrient dependency, and cancer therapy.
- Author
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Koppula P, Zhuang L, and Gan B
- Subjects
- Amino Acid Transport System y+ antagonists & inhibitors, Amino Acid Transport System y+ metabolism, Cystine antagonists & inhibitors, DNA Methylation drug effects, Ferroptosis genetics, Gene Expression Regulation, Neoplastic, Glucose antagonists & inhibitors, Glucose metabolism, Glutamine antagonists & inhibitors, Glutamine metabolism, Glutathione antagonists & inhibitors, Glutathione metabolism, Histones genetics, Histones metabolism, Humans, Molecular Targeted Therapy, Neoplasms genetics, Neoplasms metabolism, Neoplasms pathology, Piperazines therapeutic use, Signal Transduction, Sorafenib therapeutic use, Sulfasalazine therapeutic use, Amino Acid Transport System y+ genetics, Antineoplastic Agents therapeutic use, Cystine metabolism, Ferroptosis drug effects, Neoplasms drug therapy
- Abstract
The cystine/glutamate antiporter SLC7A11 (also commonly known as xCT) functions to import cystine for glutathione biosynthesis and antioxidant defense and is overexpressed in multiple human cancers. Recent studies revealed that SLC7A11 overexpression promotes tumor growth partly through suppressing ferroptosis, a form of regulated cell death induced by excessive lipid peroxidation. However, cancer cells with high expression of SLC7A11 (SLC7A11
high ) also have to endure the significant cost associated with SLC7A11-mediated metabolic reprogramming, leading to glucose- and glutamine-dependency in SLC7A11high cancer cells, which presents potential metabolic vulnerabilities for therapeutic targeting in SLC7A11high cancer. In this review, we summarize diverse regulatory mechanisms of SLC7A11 in cancer, discuss ferroptosis-dependent and -independent functions of SLC7A11 in promoting tumor development, explore the mechanistic basis of SLC7A11-induced nutrient dependency in cancer cells, and conceptualize therapeutic strategies to target SLC7A11 in cancer treatment. This review will provide the foundation for further understanding SLC7A11 in ferroptosis, nutrient dependency, and tumor biology and for developing novel effective cancer therapies., (© 2020. The Author(s).)- Published
- 2021
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441. mTORC1 and ferroptosis: Regulatory mechanisms and therapeutic potential.
- Author
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Lei G, Zhuang L, and Gan B
- Subjects
- Iron, Lipid Peroxidation, Mechanistic Target of Rapamycin Complex 1, Reactive Oxygen Species, Ferroptosis
- Abstract
Ferroptosis, a form of regulated cell death triggered by lipid hydroperoxide accumulation, has an important role in a variety of diseases and pathological conditions, such as cancer. Targeting ferroptosis is emerging as a promising means of therapeutic intervention in cancer treatment. Polyunsaturated fatty acids, reactive oxygen species, and labile iron constitute the major underlying triggers for ferroptosis. Other regulators of ferroptosis have also been discovered recently, among them the mechanistic target of rapamycin complex 1 (mTORC1), a central controller of cell growth and metabolism. Inhibitors of mTORC1 have been used in treating diverse diseases, including cancer. In this review, we discuss recent findings linking mTORC1 to ferroptosis, dissect mechanisms underlying the establishment of mTORC1 as a key ferroptosis modulator, and highlight the potential of co-targeting mTORC1 and ferroptosis in cancer treatment. This review will provide valuable insights for future investigations of ferroptosis and mTORC1 in fundamental biology and cancer therapy., (© 2021 Wiley Periodicals LLC.)
- Published
- 2021
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442. Ether phospholipids govern ferroptosis.
- Author
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Lee H, Zhuang L, and Gan B
- Subjects
- Humans, Lipid Peroxidation, Phospholipids metabolism, Plasmalogens metabolism, Animals, Membrane Proteins metabolism, Membrane Proteins genetics, Ferroptosis genetics
- Abstract
Ferroptosis is a cell death modality triggered by excessive lipid peroxidation. Two recent studies (Zou et al., 2020; Cui et al., 2021) not only reveal critical roles of ether-linked phospholipids as an additional source for providing polyunsaturated fatty acid-containing phospholipids in driving ferroptosis but also suggest a context-dependent role of TMEM189-mediated vinyl-ether phospholipid (plasmalogen) synthesis in ferroptosis., Competing Interests: Conflict of interest Boyi Gan is an inventor on patent applications involving targeting ferroptosis in cancer therapy. The other authors declare no competing interests., (Copyright © 2021 Institute of Genetics and Developmental Biology, Chinese Academy of Sciences, and Genetics Society of China. Published by Elsevier Ltd. All rights reserved.)
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- 2021
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443. KEAP1 deficiency drives glucose dependency and sensitizes lung cancer cells and tumors to GLUT inhibition.
- Author
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Koppula P, Olszewski K, Zhang Y, Kondiparthi L, Liu X, Lei G, Das M, Fang B, Poyurovsky MV, and Gan B
- Abstract
Metabolic reprogramming in cancer cells can create metabolic liabilities. KEAP1 -mutant lung cancer is refractory to most current therapies. Here we show that KEAP1 deficiency promotes glucose dependency in lung cancer cells, and KEAP1 -mutant/deficient lung cancer cells are more vulnerable to glucose deprivation than their WT counterparts. Mechanistically, KEAP1 inactivation in lung cancer cells induces constitutive activation of NRF2 transcription factor and aberrant expression of NRF2 target cystine transporter SLC7A11; under glucose limitation, high cystine uptake in KEAP1 -inactivated lung cancer cells stimulates toxic intracellular disulfide buildup, NADPH depletion, and cell death, which can be rescued by genetic ablation of NRF2-SLC7A11 axis or treatments inhibiting disulfide accumulation. Finally, we show that KEAP1 -inactivated lung cancer cells or xenograft tumors are sensitive to glucose transporter inhibitor. Together, our results reveal that KEAP1 deficiency induces glucose dependency in lung cancer cells and uncover a therapeutically relevant metabolic liability., Competing Interests: K.O., L.K., and M.V.P. are full-time employees of Kadmon Corporation. B.G. is an inventor on patent applications involving targeting ferroptosis in cancer therapy. The other authors declare no competing interests., (© 2021 The Author(s).)
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- 2021
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444. DHODH-mediated ferroptosis defence is a targetable vulnerability in cancer.
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Mao C, Liu X, Zhang Y, Lei G, Yan Y, Lee H, Koppula P, Wu S, Zhuang L, Fang B, Poyurovsky MV, Olszewski K, and Gan B
- Subjects
- Animals, Biphenyl Compounds pharmacology, Cell Line, Tumor, Dihydroorotate Dehydrogenase genetics, Female, Gene Deletion, Humans, Lipid Peroxidation, Metabolomics, Mice, Nude, Phospholipid Hydroperoxide Glutathione Peroxidase antagonists & inhibitors, Phospholipid Hydroperoxide Glutathione Peroxidase genetics, Xenograft Model Antitumor Assays, Mice, Dihydroorotate Dehydrogenase metabolism, Ferroptosis, Mitochondria metabolism, Neoplasms enzymology
- Abstract
Ferroptosis, a form of regulated cell death that is induced by excessive lipid peroxidation, is a key tumour suppression mechanism
1-4 . Glutathione peroxidase 4 (GPX4)5,6 and ferroptosis suppressor protein 1 (FSP1)7,8 constitute two major ferroptosis defence systems. Here we show that treatment of cancer cells with GPX4 inhibitors results in acute depletion of N-carbamoyl-L-aspartate, a pyrimidine biosynthesis intermediate, with concomitant accumulation of uridine. Supplementation with dihydroorotate or orotate-the substrate and product of dihydroorotate dehydrogenase (DHODH)-attenuates or potentiates ferroptosis induced by inhibition of GPX4, respectively, and these effects are particularly pronounced in cancer cells with low expression of GPX4 (GPX4low ). Inactivation of DHODH induces extensive mitochondrial lipid peroxidation and ferroptosis in GPX4low cancer cells, and synergizes with ferroptosis inducers to induce these effects in GPX4high cancer cells. Mechanistically, DHODH operates in parallel to mitochondrial GPX4 (but independently of cytosolic GPX4 or FSP1) to inhibit ferroptosis in the mitochondrial inner membrane by reducing ubiquinone to ubiquinol (a radical-trapping antioxidant with anti-ferroptosis activity). The DHODH inhibitor brequinar selectively suppresses GPX4low tumour growth by inducing ferroptosis, whereas combined treatment with brequinar and sulfasalazine, an FDA-approved drug with ferroptosis-inducing activity, synergistically induces ferroptosis and suppresses GPX4high tumour growth. Our results identify a DHODH-mediated ferroptosis defence mechanism in mitochondria and suggest a therapeutic strategy of targeting ferroptosis in cancer treatment.- Published
- 2021
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445. Ferroptosis as a mechanism to mediate p53 function in tumor radiosensitivity.
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Lei G, Zhang Y, Hong T, Zhang X, Liu X, Mao C, Yan Y, Koppula P, Cheng W, Sood AK, Liu J, and Gan B
- Subjects
- Amino Acid Transport System y+ metabolism, Animals, Cell Line, Tumor, Female, Ferroptosis, Humans, Lipid Peroxidation, Mice, Mice, Inbred NOD, Mice, SCID, Neoplasms pathology, Radiation Tolerance, Xenograft Model Antitumor Assays, Neoplasms metabolism, Neoplasms radiotherapy, Tumor Suppressor Protein p53 metabolism
- Abstract
Ferroptosis, a form of regulated cell death triggered by lipid peroxidation, was recently identified as an important mechanism in radiotherapy (RT)-mediated tumor suppression and radioresistance, although the exact genetic contexts in which to target ferroptosis in RT remains to be defined. p53 is the most commonly mutated gene in human cancers and a major effector to RT. Here, we identify ferroptosis as a critical mechanism to mediate p53 function in tumor radiosensitivity. Mechanistically, RT-mediated p53 activation antagonizes RT-induced SLC7A11 expression and represses glutathione synthesis, thereby promoting RT-induced lipid peroxidation and ferroptosis. p53 deficiency promotes radioresistance in cancer cells or tumors at least partly through SLC7A11-mediated ferroptosis inhibition. Ferroptosis inducers (FINs) that inhibit SLC7A11 exert significant radiosensitizing effects in tumor organoids and patient-derived xenografts with p53 mutation or deficiency. Finally, we show that RT-induced ferroptosis correlates with p53 activation and better clinical outcomes to RT in cancer patients. Together, our study uncovers a previously unappreciated role of ferroptosis in p53-mediated radiosensitization and suggest using FINs in combination with RT to treat p53-mutant cancers.
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- 2021
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446. Hidden hearing loss is associated with loss of ribbon synapses of cochlea inner hair cells.
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Song F, Gan B, Wang N, Wang Z, and Xu AT
- Subjects
- Animals, Disks Large Homolog 4 Protein metabolism, Evoked Potentials, Auditory, Guinea Pigs, Hair Cells, Auditory, Inner metabolism, Hearing Loss, Noise-Induced metabolism, Male, Synapses metabolism, Synapses pathology, Synaptic Potentials, Hair Cells, Auditory, Inner physiology, Hearing Loss, Noise-Induced physiopathology, Synapses physiology
- Abstract
The present study aimed to observe the changes in the cochlea ribbon synapses after repeated exposure to moderate-to-high intensity noise. Guinea pigs received 95 dB SPL white noise exposure 4 h a day for consecutive 7 days (we regarded it a medium-term and moderate-intensity noise, or MTMI noise). Animals were divided into four groups: Control, 1DPN (1-day post noise), 1WPN (1-week post noise), and 1MPN (1-month post noise). Auditory function analysis by auditory brainstem response (ABR) and compound action potential (CAP) recordings, as well as ribbon synapse morphological analyses by immunohistochemistry (Ctbp2 and PSD95 staining) were performed 1 day, 1 week, and 1 month after noise exposure. After MTMI noise exposure, the amplitudes of ABR I and III waves were suppressed. The CAP threshold was elevated, and CAP amplitude was reduced in the 1DPN group. No apparent changes in hair cell shape, arrangement, or number were observed, but the number of ribbon synapse was reduced. The 1WPN and 1MPN groups showed that part of ABR and CAP changes recovered, as well as the synapse number. The defects in cochlea auditory function and synapse changes were observed mainly in the high-frequency region. Together, repeated exposure in MTMI noise can cause hidden hearing loss (HHL), which is partially reversible after leaving the noise environment; and MTMI noise-induced HHL is associated with inner hair cell ribbon synapses., (© 2021 The Author(s).)
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- 2021
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447. A mTORC1-mediated cyst(e)ine sensing mechanism governing GPX4 synthesis and ferroptosis.
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Yan Y, Lei G, and Gan B
- Abstract
Ferroptosis is a cell death mechanism triggered by lipid peroxidation. Our recent study linked cyst(e)ine availability with glutathione peroxidase 4 (GPX4) protein synthesis and ferroptosis mitigation via a Rag-mechanistic target of rapamycin complex 1 (mTORC1) axis, and proposed that co-targeting mTORC1 and ferroptosis is a promising strategy for cancer therapy., (© 2021 Taylor & Francis Group, LLC.)
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- 2021
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448. Temperature affects substrate-associated bacterial composition during Ganoderma lucidum hyphal growth.
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Zhang B, Zhou J, Li X, Ye L, Jia D, Gan B, and Tan W
- Subjects
- Bacteria classification, Bacteria genetics, Culture Media, Hot Temperature, Hyphae growth & development, Bacteria isolation & purification, Microbiota, Reishi growth & development, Temperature
- Abstract
The growth of the well-known fungus Ganoderma lucidum is influenced by temperature, which has an impact on the associated microbial structure in the substrate. In this study, we analyzed the bacterial diversity of the substrate at different temperatures using next-generation sequencing technology. A total of 513 733 sequences from 15 samples were assigned to 19 bacterial phyla. The samples were dominated by Proteobacteria , followed by Firmicutes ; the 2 phyla exhibited opposite changes with elevated temperature. Bacterial genera showed different abundances at different temperatures, in which Sediminibacterium maintained a stable abundance below 40 °C, while Ochrobactrum and Rhodococcus were enriched with elevated temperature and both showed their highest abundances at 40 °C. Functional prediction uncovered 39 identified KEGG pathways, and bacterial genes involved in the membrane transport pathway exhibited the highest abundance subject to heat (40 °C) during the growth of G . lucidum . In general, our findings illustrated the influence of temperatures on G. lucidum mycelial morphology and the bacterial community in the substrate, and the results will facilitate cultivation of this fungus.
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- 2021
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449. mTORC1 couples cyst(e)ine availability with GPX4 protein synthesis and ferroptosis regulation.
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Zhang Y, Swanda RV, Nie L, Liu X, Wang C, Lee H, Lei G, Mao C, Koppula P, Cheng W, Zhang J, Xiao Z, Zhuang L, Fang B, Chen J, Qian SB, and Gan B
- Subjects
- Amino Acid Transport System y+ metabolism, Cell Line, Tumor, Gene Knockout Techniques, Glutathione metabolism, HEK293 Cells, Humans, Mechanistic Target of Rapamycin Complex 1 antagonists & inhibitors, Neoplasms pathology, Cysteine metabolism, Cystine metabolism, Ferroptosis physiology, Mechanistic Target of Rapamycin Complex 1 metabolism, Phospholipid Hydroperoxide Glutathione Peroxidase metabolism
- Abstract
Glutathione peroxidase 4 (GPX4) utilizes glutathione (GSH) to detoxify lipid peroxidation and plays an essential role in inhibiting ferroptosis. As a selenoprotein, GPX4 protein synthesis is highly inefficient and energetically costly. How cells coordinate GPX4 synthesis with nutrient availability remains unclear. In this study, we perform integrated proteomic and functional analyses to reveal that SLC7A11-mediated cystine uptake promotes not only GSH synthesis, but also GPX4 protein synthesis. Mechanistically, we find that cyst(e)ine activates mechanistic/mammalian target of rapamycin complex 1 (mTORC1) and promotes GPX4 protein synthesis at least partly through the Rag-mTORC1-4EBP signaling axis. We show that pharmacologic inhibition of mTORC1 decreases GPX4 protein levels, sensitizes cancer cells to ferroptosis, and synergizes with ferroptosis inducers to suppress patient-derived xenograft tumor growth in vivo. Together, our results reveal a regulatory mechanism to coordinate GPX4 protein synthesis with cyst(e)ine availability and suggest using combinatorial therapy of mTORC1 inhibitors and ferroptosis inducers in cancer treatment.
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- 2021
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450. Clinical experience on the use of perampanel in epilepsy among child neurologists in the Philippines.
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Macrohon B, Janette Resurreccion-De La Calzada J, and Sanchez-Gan B
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- Adolescent, Child, Child, Preschool, Cross-Sectional Studies, Female, Humans, Infant, Male, Neurologists, Philippines, Practice Patterns, Physicians', Surveys and Questionnaires, Treatment Outcome, Anticonvulsants therapeutic use, Epilepsy drug therapy, Nitriles therapeutic use, Pyridones therapeutic use
- Abstract
Background: Perampanel is the latest anti-seizure medication introduced in the Philippines in 2015. This was initially approved as an adjunctive treatment for focal seizures and those with secondary generalization among individuals 12 years old and above. By March 2020, it has been approved also for generalized seizures and in children 4 years and above. The general objective of this research is to describe the clinical experience of Filipino child neurologists on the use of perampanel in children., Methods: This is a cross-sectional descriptive study that surveyed child neurologists with review of medical records of children who have received perampanel as either an adjunctive therapy or monotherapy for epilepsy., Results: There were 65 patients included in the study aged 1 to 18 years with a mean age of 10.0 ± 5.2 years and a median of 10 years. Follow-up duration were between 2 weeks to more than a year. Perampanel was started in 98.5% as an add-on treatment between 5 months and 18 years of age. The responder rate is 69.2% (45/65), seizure-free rate is 29.2% (19/65), seizure-aggravation rate is 9.2% (6/65), and perampanel retention rate is 83.1% (54/65). Treatment emergent adverse events were noted in 53.8% of the children with somnolence (20.0%), gait problems (12.3%), weight gain (10.8%) and dizziness (9.2%) as the most common events experienced. Dizziness was experienced significantly more among children 12 to 18 years of age., Conclusion: Perampanel is seen to be effective and relatively safe to use among Filipino children., Competing Interests: Declaration of Competing Interest The authors declare the following financial interests/personal relationships which may be considered as potential competing interests: Macrohon received an educational grant for an EEG review workshop in Feb 2020 from Hi-Esai. Sanchez-Gan is currently a member of the CNS advisory board of Hi-Esai. Resurreccion-De La Calzada is involved in clinical trials on antiepilepsy medications excluding perampanel. This study was partially financed by a grant provided by the Child Neurology Society Philippines, Inc. (CNSP)., (Copyright © 2020 The Japanese Society of Child Neurology. Published by Elsevier B.V. All rights reserved.)
- Published
- 2021
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