396 results on '"Derek K. Jones"'
Search Results
352. 'Squashing peanuts and smashing pumpkins': how noise distorts diffusion-weighted MR data
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Derek K. Jones and Peter J. Basser
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Physics ,Brain Mapping ,Models, Statistical ,Ambient noise level ,Signal Processing, Computer-Assisted ,Diffusion Anisotropy ,Noise Artifact ,Background noise ,White matter ,Nuclear magnetic resonance ,medicine.anatomical_structure ,Diffusion Magnetic Resonance Imaging ,medicine ,Effective diffusion coefficient ,Anisotropy ,Radiology, Nuclear Medicine and imaging ,Artifacts ,Image resolution - Abstract
New diffusion-weighted imaging (DWI) methods, including high-b, q-space, and high angular resolution MRI methods, attempt to extract information about non-Gaussian diffusion in tissue that is not provided by low-b-value (b approximately 1000 s mm(-2)) diffusion or diffusion tensor magnetic resonance imaging (DT-MRI). Additionally, DWI data with higher spatial resolution are being acquired to resolve fine anatomic structures, such as white matter fasciculi. Increasing diffusion-weighting or decreasing voxel size can reduce the signal-to-noise ratio so that some DWI signals are close to the background noise level. Here we report several new artifacts that can be explained by considering how background noise affects the peanut-shaped angular apparent diffusion coefficient (ADC) profile. These include an orientationally dependent deviation from Gaussian behavior of the ADC profile, an underestimation of indices of diffusion anisotropy, and a correlation between estimates of mean diffusivity and diffusion anisotropy. We also discuss how noise can cause increased gray/white matter DWI contrast at higher b values and an apparent elevation of diffusion anisotropy in acute ischemia. Importantly, all of these artifacts are negligible in the b-value range typically used in DT-MRI of brain (b approximately 1000 s mm(-2)). Finally, we demonstrate a strategy for ameliorating the rectified noise artifact in data collected at higher b values.
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- 2004
353. The effect of filter size on VBM analyses of DT-MRI data
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Mark R. Symms, Derek K. Jones, Mara Cercignani, and Robert Howard
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Adult ,Male ,Cognitive Neuroscience ,Gaussian blur ,computer.software_genre ,behavioral disciplines and activities ,symbols.namesake ,Voxel ,Cerebellum ,Statistics ,Fractional anisotropy ,Image Interpretation, Computer-Assisted ,Humans ,Matched filter ,Voxel-based morphometry ,Middle Aged ,Temporal Lobe ,Diffusion Magnetic Resonance Imaging ,nervous system ,Neurology ,Data Interpretation, Statistical ,Positron-Emission Tomography ,Spatial normalization ,symbols ,Schizophrenia ,Anisotropy ,Psychology ,computer ,Smoothing ,Diffusion MRI - Abstract
Voxel-based morphometry (VBM) has been used to analyze diffusion tensor MRI (DT-MRI) data in a number of studies. In VBM, following spatial normalization, data are smoothed to improve the validity of statistical inferences and to reduce inter-individual variation. However, the size of the smoothing filter used for VBM of DT-MRI data is highly variable across studies. For example, a literature review revealed that Gaussian smoothing kernels ranging in size (full width at half maximum) from zero to 16 mm have been used in DT-MRI VBM type studies. To investigate the effect of varying filter size in such analyses, whole brain DT-MRI data from 14 schizophrenic patients were compared with those of 14 matched control subjects using VBM, when the filter size was varied from zero to 16 mm. Within this range of smoothing, four different conclusions regarding apparent patient control differences could be made: (i) no significant patient-control differences; (ii) reduced FA in right superior temporal gyrus (STG) in patients; (iii) reduced FA in both right STG and left cerebellum in patients; and (iv) reduced FA only in left cerebellum in patients. These findings stress the importance of recognizing the effect of the matched filter theorem on VBM analyses of DT-MRI data. Finally, we investigated whether one of the underlying assumptions of parametric VBM, i.e., the normality of the residuals, is met. Our results suggest that, even with moderate smoothing, a large number of voxels within central white matter regions may have non-normally distributed residuals thus making valid statistical inferences with a parametric approach problematic in these areas.
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- 2004
354. Diffusion tensor MRI correlates with executive dysfunction in patients with ischaemic leukoaraiosis
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Hugh S. Markus, Michael O'Sullivan, Robin G. Morris, Steven Williams, Derek K. Jones, and B. Huckstep
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Brain Infarction ,Male ,Paper ,medicine.medical_specialty ,Pathology ,Lacunar stroke ,Sensitivity and Specificity ,Brain Ischemia ,Lesion ,White matter ,Predictive Value of Tests ,Internal medicine ,medicine ,Humans ,Neuropsychological assessment ,Vascular dementia ,Aged ,Aged, 80 and over ,medicine.diagnostic_test ,Dementia, Vascular ,Leukoaraiosis ,Brain ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Radiography ,Psychiatry and Mental health ,medicine.anatomical_structure ,Diffusion Magnetic Resonance Imaging ,Cardiology ,Surgery ,Female ,Neurology (clinical) ,medicine.symptom ,Psychology ,Cognition Disorders ,Diffusion MRI - Abstract
Background: Cerebral small vessel disease is a common cause of vascular dementia. Both discrete lacunar infarcts and more diffuse ischaemic changes, seen as confluent high signal (leukoaraiosis) on T2 weighted magnetic resonance imaging (MRI), occur. However, there is a weak correlation between T2 lesion load and cognitive impairment. Diffusion tensor MRI (DTI) is a new technique that may provide a better index of white matter damage. Objectives: To determine whether DTI measures are correlated more strongly with cognitive performance than lesion load on T2 weighted images, and whether these correlations are independent of conventional MRI parameters. Methods: 36 patients with ischaemic leukoaraiosis (leukoaraiosis plus a previous lacunar stroke) and 19 healthy volunteers underwent DTI, conventional MRI, and neuropsychological assessment. Results: On DTI, diffusivity was increased both within lesions and in normal appearing white matter. Mean diffusivity of normal appearing white matter correlated with full scale IQ ( r = −0.46, p = 0.009) and tests of executive function. These correlations remained significant after controlling for age, sex, brain volume, and T1/T2 lesion volumes. No significant correlation was identified between T2 lesion load and IQ or neuropsychological scores. Of conventional measures, brain volume correlated best with cognitive function. Conclusions: Diffusion tensor measurements correlate better with cognition than conventional MRI measures. They may be useful in monitoring disease progression and as a surrogate marker for treatment trials. The findings support the role of white matter damage and disruption of white matter connections in the pathogenesis of cognitive impairment in cerebral small vessel disease.
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- 2004
355. Occipito-temporal connections in the human brain
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Derek K. Jones, Dominic Ffytche, Rosario Donato, and Marco Catani
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Temporal cortex ,Adult ,Male ,Anatomy ,Human brain ,Magnetic Resonance Imaging ,Temporal Lobe ,Temporal lobe ,medicine.anatomical_structure ,Nerve Fibers ,Neural Pathways ,medicine ,Humans ,Vertical occipital fasciculus ,Visual Pathways ,Neurology (clinical) ,Inferior longitudinal fasciculus ,Occipital Lobe ,Psychology ,Neuroscience ,Optic radiation ,Tractography ,Diffusion MRI - Abstract
Diffusion tensor MRI (DT-MRI) provides information about the structural organization and orientation of white matter fibres and, through the technique of 'tractography', reveals the trajectories of cerebral white matter tracts. We used tractography in the living human brain to address the disputed issue of the nature of occipital and temporal connections. Classical anatomical studies described direct fibre connections between occipital and anterior temporal cortex in a bundle labelled the inferior longitudinal fasciculus (ILF). However, their presence has been challenged by more recent evidence suggesting that connections between the two regions are entirely indirect, conveyed by the occipito-temporal projection system--a chain of U-shaped association fibres. DT-MRI data were collected from 11 right-handed healthy subjects (mean age 33.3 +/- 4.7 years). Each data set was co-registered with a standard MRI brain template, and a group-averaged DT-MRI data set was created. 'Virtual' in vivo dissection of occipito-temporal connections was performed in the group-averaged data. Further detailed virtual dissection was performed on the single brain data sets. Our results suggest that in addition to the indirect connections of the occipito-temporal projection system: (i) a major associative connection between the occipital and anterior temporal lobe is provided by a fibre bundle whose origin, course and termination are consistent with classical descriptions of the ILF in man and with monkey visual anatomy; (ii) the tractography-defined ILF is structurally distinct from fibres of the optic radiation and from U-shaped fibres connecting adjacent gyri; (iii) it arises in extrastriate visual 'association' areas; and (iv) it projects to lateral and medial anterior temporal regions. While the function of the direct ILF pathway is unclear, it appears to mediate the fast transfer of visual signals to anterior temporal regions and neuromodulatory back-projections from the amygdala to early visual areas. Future tractography studies of patients with occipito-temporal disconnection syndromes may help define the functional roles of the direct and indirect occipito-temporal pathways.
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- 2003
356. Determining and visualizing uncertainty in estimates of fiber orientation from diffusion tensor MRI
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Derek K. Jones
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Orientation (computer vision) ,business.industry ,Physics::Medical Physics ,Brain ,Reproducibility of Results ,Image processing ,computer.software_genre ,Magnetic Resonance Imaging ,Cone of Uncertainty ,Voxel ,Image Processing, Computer-Assisted ,Anisotropy ,Humans ,Radiology, Nuclear Medicine and imaging ,Computer vision ,Tensor ,Artificial intelligence ,business ,Algorithm ,computer ,Tractography ,Mathematics ,Diffusion MRI - Abstract
Diffusion tensor MRI (DT-MRI) permits determination of the dominant orientation of structured tissue within an image voxel. This has led to the development of 2D graphical methods for representing fiber orientation and DT-MRI "tractography," which aims to reconstruct the 3D trajectories of white matter fasciculi. Most contemporary fiber orientation mapping schemes and tractography algorithms employ the directional information contained in the eigenvectors of the diffusion tensor to approximate white matter fiber orientation. However, while the uncertainty associated with every estimate of an eigenvector has long been recognized, no attempts to quantify this uncertainty in vivo have been reported. Here, a method is proposed for determining confidence intervals in fiber orientation from real DT-MRI data using the bootstrap method. This is used to construct maps of the "cone of uncertainty," allowing simultaneous viewing of fiber orientation and its uncertainty, and to examine the relationship between orientation uncertainty and tissue anisotropy.
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- 2003
357. Chronic pain
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Derek K. Jones and Denis Martin
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medicine.medical_specialty ,business.industry ,Physical therapy ,medicine ,Chronic pain ,business ,medicine.disease - Published
- 2003
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358. Applications of diffusion-weighted and diffusion tensor MRI to white matter diseases - a review
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Derek K. Jones and Mark A. Horsfield
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Multiple Sclerosis ,Computer science ,HIV Infections ,Creutzfeldt-Jakob Syndrome ,White matter ,Diffusion ,Brain White Matter ,Alzheimer Disease ,Neural Pathways ,medicine ,Radiology, Nuclear Medicine and imaging ,Computer vision ,Spectroscopy ,business.industry ,Amyotrophic Lateral Sclerosis ,Brain ,Water ,medicine.anatomical_structure ,Dementia, Multi-Infarct ,Diffusion Magnetic Resonance Imaging ,White Matter Diseases ,Molecular Medicine ,Anisotropy ,Artificial intelligence ,business ,Nuclear medicine ,Diffusion MRI ,Demyelinating Diseases - Abstract
This paper reviews the current applications of diffusion-weighted and diffusion tensor MRI in diseases of the brain white matter. The contribution that diffusion-weighted imaging has made to our understanding of white matter diseases is critically appraised. The quantitative nature of diffusion MRI is one of its major attractions; however, this is offset by the more advanced hardware required to collect diffusion-weighted images reliably, and the more complex processing to produce quantitative parametric diffusion images. With the now common availability of scanners equipped to perform echo-planar imaging, the acquisition of diffusion tensor images is sure to become more widespread and routine.
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- 2002
359. Spatial normalization and averaging of diffusion tensor MRI data sets
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Derek K, Jones, Lewis D, Griffin, Daniel C, Alexander, Marco, Catani, Mark A, Horsfield, Robert, Howard, and Steve C R, Williams
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Adult ,Male ,Brain Mapping ,Models, Neurological ,Population ,Brain ,Magnetic Resonance Imaging ,Diffusion ,Spinal Cord ,Data Interpretation, Statistical ,Image Interpretation, Computer-Assisted ,Anisotropy ,Humans ,Algorithms - Abstract
Diffusion tensor magnetic resonance imaging (DT-MRI) is unique in providing information about both the structural integrity and the orientation of white matter fibers in vivo and, through "tractography", revealing the trajectories of white matter tracts. DT-MRI is therefore a promising technique for detecting differences in white matter architecture between different subject populations. However, while studies involving analyses of group averages of scalar quantities derived from DT-MRI data have been performed, as yet there have been no similar studies involving the whole tensor. Here we present the first step towards realizing such a study, i.e., the spatial normalization of whole tensor data sets. The approach is illustrated by spatial normalization of 10 DT-MRI data sets to a standard anatomical template. Both qualitative and quantitative approaches are described for assessing the results of spatial normalization. Techniques are then described for combining the spatially normalized data sets according to three definitions of average, i.e., the mean, median, and mode of a distribution of tensors. The current absence of, and hence need for, appropriate statistical tests for comparison of results derived from group-averaged DT-MRI data sets is then discussed. Finally, the feasibility of performing tractography on the group-averaged DT-MRI data set is investigated and the possibility and implications of generating a generic map of brain connectivity from a group of subjects is considered.
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- 2002
360. Virtual in vivo interactive dissection of white matter fasciculi in the human brain
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Robert Howard, Derek K. Jones, Sinisa Pajevic, and Marco Catani
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Adult ,Male ,Cognitive Neuroscience ,Uncinate fasciculus ,Occipitofrontal fasciculus ,behavioral disciplines and activities ,Corpus Callosum ,Diffusion ,Nerve Fibers ,Microcomputers ,Image Interpretation, Computer-Assisted ,Neural Pathways ,Fasciculus ,medicine ,Humans ,Arcuate fasciculus ,Vertical occipital fasciculus ,Inferior longitudinal fasciculus ,biology ,Extreme capsule ,Brain ,Anatomy ,biology.organism_classification ,Magnetic Resonance Imaging ,Frontal Lobe ,medicine.anatomical_structure ,Neurology ,nervous system ,Anisotropy ,Occipital Lobe ,Psychology ,Neuroscience ,Algorithms ,psychological phenomena and processes ,Diffusion MRI - Abstract
This work reports the use of diffusion tensor magnetic resonance tractography to visualize the three-dimensional (3D) structure of the major white matter fasciculi within living human brain. Specifically, we applied this technique to visualize in vivo (i) the superior longitudinal (arcuate) fasciculus, (ii) the inferior longitudinal fasciculus, (iii) the superior fronto-occipital (subcallosal) fasciculus, (iv) the inferior fronto-occipital fasciculus, (v) the uncinate fasciculus, (vi) the cingulum, (vii) the anterior commissure, (viii) the corpus callosum, (ix) the internal capsule, and (x) the fornix. These fasciculi were first isolated and were then interactively displayed as a 3D-rendered object. The virtual tract maps obtained in vivo using this approach were faithful to the classical descriptions of white matter anatomy that have previously been documented in postmortem studies. Since we have been able to interactively delineate and visualize white matter fasciculi over their entire length in vivo, in a manner that has only previously been possible by histological means, "virtual in vivo interactive dissection" (VIVID) adds a new dimension to anatomical descriptions of the living human brain. (C) 2002 Elsevier Science (USA).
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- 2002
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361. The future for diffusion tensor imaging in neuropsychiatry
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Stephen E. Rose, Robin A. Hurley, Carlo Pierpaoli, Jonathan B. Chalk, Derek K. Jones, Katherine H. Taber, and Fergus J. Rugg-Gunn
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Psychiatry ,Neuropsychiatry ,Magnetic Resonance Imaging ,Clinical neurology ,White matter ,Psychiatry and Mental health ,Nuclear magnetic resonance ,medicine.anatomical_structure ,Brain Injuries ,Nerve Degeneration ,medicine ,Humans ,Neurology (clinical) ,Diffusion (business) ,Psychology ,Neuroscience ,Diffusion MRI - Published
- 2002
362. Normal-appearing white matter in ischemic leukoaraiosis: a diffusion tensor MRI study
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Jozef Jarosz, Paul Summers, Derek K. Jones, Michael O'Sullivan, Steven Williams, and Hugh S. Markus
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Male ,Pathology ,medicine.medical_specialty ,Ischemia ,Neuropsychological Tests ,Brain Ischemia ,White matter ,Wisconsin Card Sorting Test ,medicine ,Image Processing, Computer-Assisted ,Humans ,Vascular dementia ,Aged ,medicine.diagnostic_test ,Dementia, Vascular ,Leukoaraiosis ,Brain ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Female ,Neurology (clinical) ,Psychology ,Diffusion MRI ,Executive dysfunction - Abstract
Ischemic leukoaraiosis is a consistent concomitant of vascular dementia. Conventional MRI provides little information about underlying white matter tract disruption and correlates poorly with cognitive dysfunction. Diffusion tensor MRI may provide better markers of tract integrity. Changes in the normal-appearing white matter were demonstrated in 30 patients with ischemic leukoaraiosis compared with 17 age-matched control subjects. These changes correlated with executive dysfunction assessed by the Wisconsin Card Sorting Test.
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- 2002
363. COMMENTARY: What Lies Beneath
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Derek K. Jones
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business.industry ,Medicine ,Surgery ,Dermatology ,General Medicine ,business - Published
- 2011
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364. HYPERCONNECTIVITY IN JME—A NETWORK ANALYSIS
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Karen Caeyenberghs, Derek K. Jones, R Powell, Rhys H. Thomas, and Khalid Hamandi
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Myoclonic Jerk ,Precuneus ,Posterior parietal cortex ,Cognition ,Hyperconnectivity ,medicine.disease ,White matter ,Psychiatry and Mental health ,medicine.anatomical_structure ,medicine ,Surgery ,Neurology (clinical) ,Juvenile myoclonic epilepsy ,Psychology ,Neuroscience ,Diffusion MRI - Abstract
Graph theory is a technique for studying whole brain connectivity and may detect subtle differences between populations without major brain structural anomalies. We used it to identify differences in structural connectivity in patients with juvenile myoclonic epilepsy (JME) and matched controls. We performed diffusion tensor imaging (DTI) in 35 JME patients and 35 controls. White matter tracts were reconstructed using deterministic fiber tractography. The automated anatomical labeling atlas (AAL) was used to identify regions of interest. Two regions were considered to be connected if a fiber bundle was present with endpoints in each. We used network-based statistics to identify subnetworks showing significant between-group differences in connectivity. We identified one significant subnetwork (p
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- 2014
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365. Erratum to: White Matter Microstructure Predicts Autistic Traits in Attention-Deficit/Hyperactivity Disorder
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Derek K. Jones, Anita Thapar, and Miriam Cooper
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medicine.medical_specialty ,Internal capsule ,Audiology ,medicine.disease ,behavioral disciplines and activities ,Developmental psychology ,medicine.anatomical_structure ,Autistic traits ,Cerebellar peduncle ,Autism spectrum disorder ,mental disorders ,Corticospinal tract ,Fractional anisotropy ,Developmental and Educational Psychology ,medicine ,Autism ,Attention deficit hyperactivity disorder ,Erratum ,Psychology - Abstract
Traits of autism spectrum disorder (ASD) in children with attention-deficit/hyperactivity disorder (ADHD) have previously been found to index clinical severity. This study examined the association of ASD traits with diffusion parameters in adolescent males with ADHD (n = 17), and also compared WM microstructure relative to controls (n = 17). Significant associations (p < 0.05, corrected) were found between fractional anisotropy/radial diffusivity and ASD trait severity (positive and negative correlations respectively), mostly in the right posterior limb of the internal capsule/corticospinal tract, right cerebellar peduncle and the midbrain. No case-control differences were found for the diffusion parameters investigated. This is the first report of a WM microstructural signature of autistic traits in ADHD. Thus, even in the absence of full disorder, ASD traits may index a distinctive underlying neurobiology in ADHD.
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- 2014
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366. AB1128 An Evaluation of A Comic Book for Children Explaining Chronic Pain in Older Adults: A Qualitative Study of Older People's Views on the Value of 'Medikidz Explain Pain'
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Blair H. Smith, Patricia Schofield, Denis Martin, Derek K. Jones, Geraldine Anthony, Lisa Anderson, Paul McNamee, Rachael Docking, and Amanda Clarke
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Biopsychosocial model ,Gerontology ,Self-management ,business.industry ,Immunology ,Chronic pain ,Grandparent ,Context (language use) ,Comics ,medicine.disease ,General Biochemistry, Genetics and Molecular Biology ,Nonprobability sampling ,Rheumatology ,medicine ,Immunology and Allergy ,business ,Qualitative research - Abstract
Background Chronic pain is a particular problem for older adults: age-related biopsychosocial changes can make it more difficult to deal with the effects of chronic pain, and widely held views that living with pain is a natural consequence of aging can add to the problem. For many older people their role as a grandparent is a significant part of their life and this can be disrupted by chronic pain. As part of a large study on self management by older people with chronic pain (EOPIC) we developed a comic book to address an issue that older people highlighted as important to them: a lack of understanding by their grandchildren and other family members of how pain affects the older person. The comic book, “What9s Up With Moira9s Grandad? Medikidz Explain Chronic Pain”, presents key information, including that gathered within the EOPIC study from interviews with older people about their experience of living with pain. The book was developed in partnership with Medikidz, in their specialist format of comic books of health information for children and younger people. Objectives To explore older people9s views on the value of the comic book. Methods This is a qualitative study using semistructured interviews. Participants were older people over 65 years with self-reported chronic pain, living in the community, who were grandparents. Purposive sampling was used to recruit men and women from a range of ages. Participants were given a copy of the comic book to use at their discretion. They then took part in a face to face interview during which they discussed their thoughts on the value of the book in the context of their role as a grandparent. The interviews were audio recorded and transcribed. The transcripts were analysed thematically. Results 13 people have been interviewed (6 women, 7 men; age range 63-87; range of duration of living with pain 3-30 years). Discussions described various degrees of disruptive effects of chronic pain on grandparenting, and understanding by young people and other family members of older people with chronic pain. Most participants were very positive about the potential of the book to facilitate young people9s understanding about chronic pain and its effects in older people, highlighting issues including the attractiveness of the format, the authenticity of the story, and the comprehensive scope of the information. Conclusions The comic book is a potentially useful resource to facilitate the understanding of younger people, and the wider family, about how chronic pain affects older adults. Acknowledgements The study was supported by a grant from the Joint UK Research Council Lifelong Health and Wellbeing initiative. Disclosure of Interest None declared DOI 10.1136/annrheumdis-2014-eular.3029
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- 2014
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367. Poster #M50 STRUCTURAL GREY MATTER AND WHITE MATTER DIFFERENCES IN INDIVIDUALS WITH PSYCHOTIC LIKE SIGNS FROM AN EPIDEMIOLOGICAL COHORT
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Glyn Lewis, Anthony S. David, Derek K. Jones, Anirban Dutt, and Mark Drakesmith
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White matter ,Psychiatry and Mental health ,medicine.medical_specialty ,medicine.anatomical_structure ,business.industry ,Cohort ,Epidemiology ,medicine ,Grey matter ,business ,Biological Psychiatry ,Developmental psychology ,Clinical psychology - Published
- 2014
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368. 6:00 PM TOPOLOGICAL FEATURES OF STRUCTURAL BRAIN NETWORKS IN SUB-CLINICAL PSYCHOSIS REVEALED BY GRAPH THEORETICAL ANALYSIS OF TRACTOGRAPHY DATA
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Glyn Lewis, Mark Drakesmith, Anthony S. David, Derek K. Jones, and Anirban Dutt
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Cognitive science ,Psychiatry and Mental health ,Psychosis ,Sub clinical ,medicine ,Graph (abstract data type) ,Psychology ,medicine.disease ,Neuroscience ,Biological Psychiatry ,Tractography - Published
- 2014
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369. MRI based diffusion and perfusion predictive model to estimate stroke evolution
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Hugh S. Markus, Jonathan B. Chalk, David M. Doddrell, A. Simmons, James Semple, Derek K. Jones, Mark A. Griffin, Geoffrey J. McLachan, Jo M. Jarosz, Fernando Zelaya, Wendy Strugnell, Michael O'Sullivan, Andrew L. Janke, Stephen E. Rose, Fang Chen, and David Peel
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Male ,Biomedical Engineering ,Biophysics ,Hemodynamics ,Blood volume ,Models, Biological ,Predictive Value of Tests ,Positive predicative value ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,Stroke ,Aged ,Blood Volume ,medicine.diagnostic_test ,business.industry ,Brain ,Magnetic resonance imaging ,medicine.disease ,Magnetic Resonance Imaging ,Cerebral blood flow ,Predictive value of tests ,Cerebrovascular Circulation ,Disease Progression ,Female ,Nuclear medicine ,business ,Perfusion ,Algorithms ,Blood Flow Velocity - Abstract
In this study we present a novel automated strategy for predicting infarct evolution, based on MR diffusion and perfusion images acquired in the acute stage of stroke. The validity of this methodology was tested on novel patient data including data acquired from an independent stroke clinic. Regions-of-interest (ROIs) defining the initial diffusion lesion and tissue with abnormal hemodynamic function as defined by the mean transit time (MTT) abnormality were automatically extracted from DWI/PI maps. Quantitative measures of cerebral blood flow (CBF) and volume (CBV) along with ratio measures defined relative to the contralateral hemisphere (r(a)CBF and r(a)CBV) were calculated for the MTT ROIs. A parametric normal classifier algorithm incorporating these measures was used to predict infarct growth. The mean r(a)CBF and r(a)CBV values for eventually infarcted MTT tissue were 0.70 +/- 0.19 and 1.20 +/- 0.36. For recovered tissue the mean values were 0.99 +/- 0.25 and 1.87 +/- 0.71, respectively. There was a significant difference between these two regions for both measures (p0.003 and p0.001, respectively). Mean absolute measures of CBF (ml/100g/min) and CBV (ml/100g) for the total infarcted territory were 33.9 +/- 9.7 and 4.2 +/- 1.9. For recovered MTT tissue, the mean values were 41.5 +/- 7.2 and 5.3 +/- 1.2, respectively. A significant difference was also found for these regions (p0.009 and p0.036, respectively). The mean measures of sensitivity, specificity, positive and negative predictive values for modeling infarct evolution for the validation patient data were 0.72 +/- 0.05, 0.97 +/- 0.02, 0.68 +/- 0.07 and 0.97 +/- 0.02. We propose that this automated strategy may allow possible guided therapeutic intervention to stroke patients and evaluation of efficacy of novel stroke compounds in clinical drug trials.
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- 2001
370. Echoplanar MRI in patients with an acute stroke syndrome
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Graham R. Cherryman, Mark A. Horsfield, D. J. Wilcock, and Derek K. Jones
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Male ,medicine.medical_specialty ,business.industry ,Vascular disease ,General Medicine ,Syndrome ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Surgery ,Central nervous system disease ,Stroke ,Acute Disease ,medicine ,Humans ,Radiology, Nuclear Medicine and imaging ,In patient ,Female ,Radiology ,business ,Artifacts ,Acute stroke ,Aged - Abstract
An increasing number of patients with an acute stroke syndrome are being admitted to hospitals with on-site echoplanar MRI scanners. In this pictorial review, we describe our experience of an MRI protocol in the first 150 such patients scanned in our hospital. We illustrate some of the advantages of using echoplanar MRI. Diffusion and susceptibility weighted acquisitions may supplement conventional MR sequences by providing useful additional information about the age and location of the lesion, together with a high sensitivity to the presence of blood breakdown products.
- Published
- 2000
371. Diffusion tensor MRI assesses corticospinal tract damage in ALS
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Mark A. Horsfield, Andrew Simmons, C M Ellis, Steven Williams, Peter Leigh, Jeremy D.P. Bland, Derek K. Jones, and J M Dawson
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Adult ,Pathology ,medicine.medical_specialty ,Internal capsule ,medicine.diagnostic_test ,Upper motor neuron ,business.industry ,Amyotrophic Lateral Sclerosis ,Pyramidal Tracts ,Magnetic resonance imaging ,Middle Aged ,Magnetic Resonance Imaging ,White matter ,Magnetics ,medicine.anatomical_structure ,Nuclear magnetic resonance ,Corticospinal tract ,Fractional anisotropy ,medicine ,Humans ,Silent period ,Neurology (clinical) ,business ,Diffusion MRI - Abstract
Background: A number of neurophysiologic and neuroimaging techniques have been evaluated in the research setting to assess upper motor neuron (UMN) damage in ALS. Changes in tissue structure in the CNS modify the diffusional behavior of water molecules, which can be detected by diffusion tensor MRI. Objectives: To explore the hypothesis that degeneration of the motor fibers in ALS would be reflected by changes in the diffusion characteristics of the white matter fibers in the posterior limb of the internal capsule and that these changes could be detected by diffusion tensor MRI. Methods: We studied 22 patients with El Escorial definite, probable, or possible ALS—11 with limb onset (mean age 54.5 ± 10.7 years) and 11 with bulbar onset (mean age 49.6 ± 11.7 years)—and compared them with 20 healthy, age-matched controls (mean age 46.0 ± 12.6 years). We assessed central motor conduction time (CMCT), threshold to stimulation, and silent period using transcranial magnetic stimulation. Diffusion tensor MRI was performed using a 1.5-T GE Signa system (Milwaukee, WI) fitted with Advanced NMR hardware and software capable of producing echo planar MR images. Data were acquired from seven coronal slices centered to include the posterior limb of the internal capsule. Maps of the mean diffusivity, fractional anisotropy, and T2-weighted signal intensity were generated. Results: There were no differences between the subject groups on measures of CMCT, threshold to stimulation, and silent period. However, the CMCT correlated with clinical measures of UMN involvement. We found a significant increase in the mean diffusivity and reduction in fractional anisotropy along the corticospinal tracts between the three subject groups, most marked in the bulbar-onset group. The fractional anisotropy correlated with measures of disease severity and UMN involvement, whereas the mean diffusivity correlated with disease duration. Conclusion: The results support the use of diffusion tensor MRI in detecting pathology of the corticospinal tracts in ALS.
- Published
- 1999
372. Characterization of white matter damage in ischemic leukoaraiosis with diffusion tensor MRI
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Steve C.R. Williams, Mark A. Horsfield, David J. Lythgoe, Derek K. Jones, Hugh S. Markus, and Andrew Simmons
- Subjects
Adult ,Male ,Pathology ,medicine.medical_specialty ,Lacunar stroke ,BF ,Brain Ischemia ,White matter ,Nuclear magnetic resonance ,Fractional anisotropy ,medicine ,Humans ,Anisotropy ,Aged ,Advanced and Specialized Nursing ,medicine.diagnostic_test ,business.industry ,Cerebral infarction ,Leukoaraiosis ,Brain ,Magnetic resonance imaging ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Dementia, Multi-Infarct ,RC0321 ,Female ,Neurology (clinical) ,Cardiology and Cardiovascular Medicine ,business ,Diffusion MRI - Abstract
Background and Purpose —Information on the neuropathological changes underlying ischemic leukoaraiosis is only available postmortem, and there are limited data on histological appearances early in the disease. Diffusion tensor imaging allows determination of the directionality of diffusion, which is greater in the direction of white matter bundles. Therefore, the technique might be expected to show loss of anisotropy (directional diffusion) in leukoaraiosis. Methods —Nine patients with ischemic leukoaraiosis (radiological leukoaraiosis and clinical lacunar stroke) and 10 age-matched controls were studied. Diffusion tensor imaging was performed, and maps of diffusion trace and fractional anisotropy were constructed. Mean values of trace and fractional anisotropy were determined in standard regions of the anterior and posterior white matter in both hemispheres. Results —In all patients with ischemic leukoaraiosis, a characteristic abnormal pattern was found, with loss of anisotropy and increased trace in the white matter. For example, in the right anterior white matter mean (SD) trace/3 was 1.12 (0.33) ×10 −3 mm 2 s −1 in patients and 0.75 (0.11) in controls ( P =0.001). In the same region, fractional anisotropy was 0.53 (0.11) in patients and 0.78 (0.09) in controls ( P r =−0.92, P Conclusions —The characteristic pattern found on diffusion tensor imaging in this patient group is consistent with axonal loss and gliosis leading to impairment to and loss of directional diffusion. The “in vivo histological” information obtained may be useful in monitoring disease progression and in investigating the pathogenesis of the cognitive impairment that may be present.
- Published
- 1999
373. An exploration of the importance of family for older people with chronic pain
- Author
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B. Smith, P. Schofield, Derek K. Jones, A. Clarke, P. McNamee, Denis Martin, and G. Anthony
- Subjects
medicine.medical_specialty ,Anesthesiology and Pain Medicine ,Neurology ,business.industry ,medicine ,Chronic pain ,Physical therapy ,Pain catastrophizing ,Neurology (clinical) ,Psychiatry ,medicine.disease ,Older people ,business - Published
- 2013
- Full Text
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374. Individual Differences in Fornix Microstructure and Body Mass Index
- Author
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John Patrick Aggleton, Claudia Metzler-Baddeley, Derek K. Jones, Michael O'Sullivan, and Roland J. Baddeley
- Subjects
Male ,Central Nervous System ,Pathology ,Anatomy and Physiology ,Fornix, Brain ,Individuality ,lcsh:Medicine ,Physiology ,Overweight ,Social and Behavioral Sciences ,Hippocampus ,Brain mapping ,Nucleus Accumbens ,Body Mass Index ,030218 nuclear medicine & medical imaging ,Behavioral Neuroscience ,Cognition ,0302 clinical medicine ,Homeostasis ,Psychology ,Cingulum (brain) ,lcsh:Science ,Aged, 80 and over ,2. Zero hunger ,Brain Mapping ,Multidisciplinary ,Fornix ,Middle Aged ,Frontal Lobe ,Mental Health ,Brain size ,Medicine ,Female ,Public Health ,medicine.symptom ,Behavioral and Social Aspects of Health ,Research Article ,medicine.medical_specialty ,BF ,Biology ,Neurological System ,03 medical and health sciences ,Reward ,Neuropsychology ,medicine ,Humans ,Obesity ,Aged ,Nutrition ,lcsh:R ,Feeding Behavior ,Neuroanatomy ,Multivariate Analysis ,lcsh:Q ,Orbitofrontal cortex ,Weight gain ,Body mass index ,030217 neurology & neurosurgery ,Neuroscience - Abstract
The prevalence of obesity and associated health conditions is increasing in the developed world. Obesity is related to atrophy and dysfunction of the hippocampus and hippocampal lesions may lead to increased appetite and weight gain. The hippocampus is connected via the fornix tract to the hypothalamus, orbitofrontal cortex, and the nucleus accumbens, all key structures for homeostatic and reward related control of food intake. The present study employed diffusion MRI tractography to investigate the relationship between microstructural properties of the fornix and variation in Body Mass Index (BMI), within normal and overweight ranges, in a group of community-dwelling older adults (53–93 years old). Larger BMI was associated with larger axial and mean diffusivity in the fornix (r = 0.64 and r = 0.55 respectively), relationships that were most pronounced in overweight individuals. Moreover, controlling for age, education, cognitive performance, blood pressure and global brain volume increased these correlations. Similar associations were not found in the parahippocampal cingulum, a comparison temporal association pathway. Thus, microstructural changes in fornix white matter were observed in older adults with increasing BMI levels from within normal to overweight ranges, so are not exclusively related to obesity. We propose that hippocampal-hypothalamic-prefrontal interactions, mediated by the fornix, contribute to the healthy functioning of networks involved in food intake control. The fornix, in turn, may display alterations in microstructure that reflect weight gain.
- Published
- 2013
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375. A comparison of FDG PET and IQNB SPECT in normal subjects and in patients with dementia
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R. E. Gibson, D.R. Weinberger, R.C. Reba, U. Mann, Julia G. Gorey, Allen R. Braun, T. N. Chase, Derek K. Jones, and Richard Coppola
- Subjects
Adult ,Blood Glucose ,Male ,Models, Anatomic ,Glucose utilization ,Frontal cortex ,Thalamus ,Deoxyglucose ,Neuropsychological Tests ,Iodine Radioisotopes ,Alzheimer Disease ,Fluorodeoxyglucose F18 ,Reference Values ,Clinical information ,medicine ,Dementia ,Humans ,In patient ,Receptors, Cholinergic ,Aged ,Aged, 80 and over ,Cerebral Cortex ,Tomography, Emission-Computed, Single-Photon ,business.industry ,Brain ,Middle Aged ,medicine.disease ,Magnetic Resonance Imaging ,Quinuclidinyl Benzilate ,Psychiatry and Mental health ,Normal volunteers ,Cerebral blood flow ,Regional Blood Flow ,Female ,Neurology (clinical) ,business ,Nuclear medicine ,Tomography, Emission-Computed - Abstract
Prior studies of patients with dementia have found similar qualitative patterns of cerebral glucose utilization with [18F]2-fluoro-2-deoxyglucose (FDG) PET and of putative muscarinic receptor activity with [123I]3-quinuclidinyl-4-iodobenzilate (IQNB). This raised doubts about whether receptor binding determines IQNB distribution and whether clinical information in IQNB scans is unique. To compare the methods directly, 4 normal volunteers and 7 patients with dementia underwent FDG PET and high-resolution IQNB SPECT scans. In normal subjects, relative regional activity from the paired scans was only weakly correlated (r = 0.29). Some regions (e.g., thalamus, frontal cortex) showed a clear disassociation of activity. In demented patients, IQNB scans tended to show larger defects than FDG scans, although one focal defect appeared only with PET. Results suggest that IQNB SPECT data are not primarily related to general physiological activity or regional cerebral blood flow and are not explained by attenuation or volume-averaging artifacts. Further studies should investigate whether IQNB scanning is a more sensitive in vivo measure of the extent of Alzheimer's disease than is FDG PET.
- Published
- 1992
376. The level of GABAergic inhibition predicts peak gamma frequency and fMRI amplitude in humans
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Jennifer B. Swettenham, Rae Edden, Derek K. Jones, Suresh D. Muthukumaraswamy, and Krish D. Singh
- Subjects
Amplitude ,Neurology ,Cognitive Neuroscience ,Gabaergic inhibition ,Psychology ,Neuroscience - Published
- 2009
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377. On repeatability and variability in human visual gamma oscillations
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Suresh D. Muthukumaraswamy, Derek K. Jones, Krish D. Singh, and Jennifer B. Swettenham
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Physics ,Neurology ,Cognitive Neuroscience ,Acoustics ,Repeatability - Published
- 2009
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- View/download PDF
378. IV.P6 Cueing therapy in the home environment of patients with Parkinson's Disease: effects on ambulatory physical activity in the RESCUE trial
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E.E.H. van Wegen, Alice Nieuwboer, Lynn Rochester, G. Kwakkel, and Derek K. Jones
- Subjects
medicine.medical_specialty ,Parkinson's disease ,Home environment ,business.industry ,Physical activity ,medicine.disease ,Physical medicine and rehabilitation ,Neurology ,Ambulatory ,medicine ,Physical therapy ,Neurology (clinical) ,Geriatrics and Gerontology ,business - Published
- 2006
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379. IV.P7 The effect of external cueing with a prototype cueing device in a Parkinson patient with severe on-freezing:a case study
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Ingrid A. L. Burgers-Bots, E.E.H. van Wegen, G. Kwakkel, Derek K. Jones, and C. de Goede
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medicine.medical_specialty ,Physical medicine and rehabilitation ,Neurology ,medicine ,Neurology (clinical) ,Geriatrics and Gerontology ,Psychology ,Cognitive psychology - Published
- 2006
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380. 15.25 The effects of guideline-based cueing therapy on gait related mobility in patients with Parkinson's disease: The RESCUE-project
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F Chavret, A M Willems, Derek K. Jones, Alice Nieuwboer, E van Wegen, Gert Kwakkel, and Lynn Rochester
- Subjects
medicine.medical_specialty ,Parkinson's disease ,business.industry ,Rehabilitation ,Biophysics ,Guideline ,medicine.disease ,Gait (human) ,Physical medicine and rehabilitation ,medicine ,Physical therapy ,Orthopedics and Sports Medicine ,In patient ,business - Published
- 2005
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381. Simultaneous DT-fMRI: Preliminary results
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Derek K. Jones, P A Boulby, Geoffrey J. M. Parker, Gareth J. Barker, Claudia A. M. Wheeler-Kingshott, and Mark R. Symms
- Subjects
Neurology ,Cognitive Neuroscience - Published
- 2001
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382. A least squares continuous diffusion tensor field approximation
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Derek K. Jones
- Subjects
Physics ,Neurology ,Field (physics) ,Cartesian tensor ,Cauchy stress tensor ,Cognitive Neuroscience ,Mathematical analysis ,Tensor density ,Least squares ,Diffusion MRI - Published
- 2001
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383. Commentary on HIV Lipodystrophy
- Author
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Derek K. Jones
- Subjects
business.industry ,HIV-Lipodystrophy ,Medicine ,Surgery ,Dermatology ,General Medicine ,Bioinformatics ,business - Published
- 2001
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384. Diffusion Tensor MRI Applied to Intra-axial Brain Tumours
- Author
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Mark A. Horsfield, A. Simmons, A Darekar, T. S. Cox, Derek K. Jones, Martin Jeffree, and Scr Williams
- Subjects
Physics ,Nuclear magnetic resonance ,Neurology ,Cognitive Neuroscience ,Diffusion MRI - Published
- 1998
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385. Book Review: The Legal Rights Manual: A Guide for Social Workers and Advice Centres
- Author
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Derek K. Jones
- Subjects
Occupational Therapy ,Social work ,Political science ,Law ,Advice (programming) - Published
- 1997
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386. Occipito‐temporal connections in the human brain.
- Author
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Marco Catani, Derek K. Jones, Rosario Donato, and Dominic H. ffytche
- Published
- 2003
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387. Application of diffusion tensor MRI to neurological segmentation
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Derek K. Jones, Steven Williams, Mark A. Horsfield, and Andrew Simmons
- Subjects
Trace (linear algebra) ,business.industry ,Computer science ,Pattern recognition ,Image segmentation ,Electronic, Optical and Magnetic Materials ,Data acquisition ,Computer Science::Computer Vision and Pattern Recognition ,Fractional anisotropy ,Segmentation ,Computer Vision and Pattern Recognition ,Artificial intelligence ,Electrical and Electronic Engineering ,Diffusion (business) ,business ,Software ,Tractography ,Diffusion MRI - Abstract
We consider the application of segmentation based on cluster classification techniques to a series of images derived from the diffusion tensor. The extension of a sophisticated cluster simulation tool used for optimizing data acquisition for such segmentation methods to diffusion-based images is described. The characteristics of a variety of diffusion-based images including fractional anisotropy images, diffusion tensor trace images, and isotropically diffusion-weighted images are considered and their application to neurological image segmentation is investigated. The critical effect of the signal-to-noise ratio on fractional anisotropy is analyzed and limitations of current echo planar–based strategies are discussed. Segmentation is shown to be possible using only images derived from the diffusion tensor, and such images are shown to offer exciting new avenues for neurological segmentation. © 1999 John Wiley & Sons, Inc. Int J Imaging Syst Technol 10, 273–286, 1999
388. Noninvasive quantification of axon radii using diffusion MRI
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Umesh S. Rudrapatna, Daniel Nunes, Noam Shemesh, Jelle Veraart, Derek K. Jones, Els Fieremans, and Dmitry S. Novikov
- Subjects
Male ,computer.software_genre ,Nerve conduction velocity ,030218 nuclear medicine & medical imaging ,corpus callosum ,diffusion MRI ,0302 clinical medicine ,Voxel ,Image Processing, Computer-Assisted ,Axon ,Biology (General) ,Physics ,General Neuroscience ,Brain ,General Medicine ,Radius ,Middle Aged ,medicine.anatomical_structure ,Medicine ,Female ,white matter ,Research Article ,Human ,Adult ,QH301-705.5 ,Science ,Neuroimaging ,General Biochemistry, Genetics and Molecular Biology ,White matter ,Young Adult ,03 medical and health sciences ,medicine ,Animals ,Humans ,Rats, Long-Evans ,Biology ,General Immunology and Microbiology ,axon diameter ,Axons ,Rats ,Diffusion Magnetic Resonance Imaging ,Entire axon ,nervous system ,Rat ,Human medicine ,computer ,Neuroscience ,030217 neurology & neurosurgery ,Diffusion MRI - Abstract
Axon caliber plays a crucial role in determining conduction velocity and, consequently, in the timing and synchronization of neural activation. Noninvasive measurement of axon radii could have significant impact on the understanding of healthy and diseased neural processes. Until now, accurate axon radius mapping has eluded in vivo neuroimaging, mainly due to a lack of sensitivity of the MRI signal to micron-sized axons. Here, we show how – when confounding factors such as extra-axonal water and axonal orientation dispersion are eliminated – heavily diffusion-weighted MRI signals become sensitive to axon radii. However, diffusion MRI is only capable of estimating a single metric, the effective radius, representing the entire axon radius distribution within a voxel that emphasizes the larger axons. Our findings, both in rodents and humans, enable noninvasive mapping of critical information on axon radii, as well as resolve the long-standing debate on whether axon radii can be quantified.
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389. Resolving bundle-specific intra-axonal T2 values within a voxel using diffusion-relaxation tract-based estimation
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Erick J. Canales-Rodríguez, Umesh S. Rudrapatna, Jonathan Rafael-Patino, Chantal M. W. Tax, Derek K. Jones, Muhamed Barakovic, Cristina Granziera, Alessandro Daducci, Maxime Chamberland, and Jean-Philippe Thiran
- Subjects
T2 relaxometry ,Computer science ,Cognitive Neuroscience ,Human brain ,computer.software_genre ,Corpus callosum ,050105 experimental psychology ,lcsh:RC321-571 ,Diffusion MRI ,White matter ,03 medical and health sciences ,0302 clinical medicine ,Voxel ,medicine ,Arcuate fasciculus ,0501 psychology and cognitive sciences ,Fiber bundle ,T(2) relaxometry ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,business.industry ,05 social sciences ,Pattern recognition ,COMMIT ,medicine.anatomical_structure ,Neurology ,Bundle ,Corticospinal tract ,Artificial intelligence ,business ,computer ,Tractography ,030217 neurology & neurosurgery - Abstract
At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T1-relaxation properties, how to resolve intra-voxel T2 heterogeneity remains an open question. Here a novel framework, named COMMIT-T2, is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T2 values within a voxel. Unlike previously-proposed voxel-based T2 estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T2 for all bundles in the voxel, COMMIT-T2 can recover specific T2 values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T2 values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T2 profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T2 compared to that of voxelwise approaches for mapping intra-axonal T2 exploiting diffusion, including a direction-averaged method and AMICO-T2, a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework.
390. Evidence for cortical 'disconnection' as a mechanism of age-related cognitive decline
- Author
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Michael O'Sullivan, Hugh S. Markus, Paul Summers, Derek K. Jones, Robin G. Morris, and Steven Williams
- Subjects
Adult ,Male ,medicine.medical_specialty ,Aging ,Trail Making Test ,Audiology ,Nerve Fibers, Myelinated ,Corpus Callosum ,White matter ,medicine ,Humans ,Neuropsychological assessment ,Cognitive decline ,Aged ,Cerebral Cortex ,Memory Disorders ,medicine.diagnostic_test ,Cognitive disorder ,Middle Aged ,medicine.disease ,Executive functions ,Magnetic Resonance Imaging ,medicine.anatomical_structure ,Female ,Neurology (clinical) ,Disconnection ,Psychology ,Neuroscience ,Diffusion MRI - Abstract
Background: Normal aging is accompanied by a decline of cognitive abilities, and executive skills may be affected selectively, but the underlying mechanisms remain obscure and preventive strategies are lacking. It has been suggested that cortical “disconnection” due to the loss of white matter fibers may play an important role. But, to date, there has been no direct demonstration of structural disconnection in humans in vivo. Methods: The authors used diffusion tensor MRI to look for evidence of ultrastructural changes in cerebral white matter in a group of 20 elderly volunteers with normal conventional MRI scans, and a group of 10 younger controls. The older group also underwent neuropsychological assessment. Results: Diffusional anisotropy, a marker of white matter tract integrity, was reduced in the white matter of older subjects and fell linearly with increasing age in the older group. Mean diffusivity was higher in the older group and increased with age. These changes were maximal in anterior white matter. In the older group, anterior mean diffusivity correlated with executive function assessed by the Trail Making Test. Conclusions: These findings provide direct evidence that white matter tract disruption occurs in normal aging and would be consistent with the cortical disconnection hypothesis of age-related cognitive decline. Maximal changes in anterior white matter provide a plausible structural basis for selective loss of executive functions. In addition to providing new information about the biological basis of cognitive abilities, diffusion tensor MRI may be a sensitive tool for assessing interventions aimed at preventing cognitive decline.
391. A closed-form method for improving inter-subject coherence in diffusion tensor magnetic resonance imaging
- Author
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Nicholas Lange, Carlo Pierpaoli, and Derek K. Jones
- Subjects
Computer science ,business.industry ,Splenium ,Image registration ,Computer vision ,Fiber bundle ,Artificial intelligence ,Tensor ,Corpus callosum ,business ,Diffusion MRI ,Coherence (physics) - Abstract
A simple method is presented to reduce within-group inter-subject scatter in diffusion tensor magnetic resonance imaging (DT-MRI). By "borrowing strength" across co-registered subjects to accommodate indirect effects of unmeasured machine and physiological noise, the method reduces voxel-specific tensor variance across subjects. The technique may aid in fiber bundle atlas construction, in testing differences between groups of subjects, and in automated outlier detection. While the technique does not in itself address DT-MRI signal artifact issues directly, it may serve to lessen the effects of these artifacts when their sources have not been measured. An example application to DT-MRI of twelve healthy male volunteers at the splenium of the corpus callosum slightly right of midline demonstrates the possible utility of the method.
392. SPHERIOUSLY? The challenges of estimating sphere radius non-invasively in the human brain from diffusion MRI
- Author
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Maryam Afzali, Markus Nilsson, Marco Palombo, and Derek K Jones
- Subjects
Diffusion-weighted imaging ,Direction-averaged diffusion signal ,b-tensor encoding ,Three-compartment model ,Spherical compartment ,Neurosciences. Biological psychiatry. Neuropsychiatry ,RC321-571 - Abstract
The Soma and Neurite Density Imaging (SANDI) three-compartment model was recently proposed to disentangle cylindrical and spherical geometries, attributed to neurite and soma compartments, respectively, in brain tissue. There are some recent advances in diffusion-weighted MRI signal encoding and analysis (including the use of multiple so-called ’b-tensor’ encodings and analysing the signal in the frequency-domain) that have not yet been applied in the context of SANDI. In this work, using: (i) ultra-strong gradients; (ii) a combination of linear, planar, and spherical b-tensor encodings; and (iii) analysing the signal in the frequency domain, three main challenges to robust estimation of sphere size were identified: First, the Rician noise floor in magnitude-reconstructed data biases estimates of sphere properties in a non-uniform fashion. It may cause overestimation or underestimation of the spherical compartment size and density. This can be partly ameliorated by accounting for the noise floor in the estimation routine. Second, even when using the strongest diffusion-encoding gradient strengths available for human MRI, there is an empirical lower bound on the spherical signal fraction and radius that can be detected and estimated robustly. For the experimental setup used here, the lower bound on the sphere signal fraction was approximately 10%. We employed two different ways of establishing the lower bound for spherical radius estimates in white matter. The first, examining power-law relationships between the DW-signal and diffusion weighting in empirical data, yielded a lower bound of 7μm, while the second, pure Monte Carlo simulations, yielded a lower limit of 3μm and in this low radii domain, there is little differentiation in signal attenuation. Third, if there is sensitivity to the transverse intra-cellular diffusivity in cylindrical structures, e.g., axons and cellular projections, then trying to disentangle two diffusion-time-dependencies using one experimental parameter (i.e., change in frequency-content of the encoding waveform) makes spherical radii estimates particularly challenging. We conclude that due to the aforementioned challenges spherical radii estimates may be biased when the corresponding sphere signal fraction is low, which must be considered.
- Published
- 2021
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393. Noninvasive quantification of axon radii using diffusion MRI
- Author
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Jelle Veraart, Daniel Nunes, Umesh Rudrapatna, Els Fieremans, Derek K Jones, Dmitry S Novikov, and Noam Shemesh
- Subjects
corpus callosum ,white matter ,axon diameter ,diffusion MRI ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
Axon caliber plays a crucial role in determining conduction velocity and, consequently, in the timing and synchronization of neural activation. Noninvasive measurement of axon radii could have significant impact on the understanding of healthy and diseased neural processes. Until now, accurate axon radius mapping has eluded in vivo neuroimaging, mainly due to a lack of sensitivity of the MRI signal to micron-sized axons. Here, we show how – when confounding factors such as extra-axonal water and axonal orientation dispersion are eliminated – heavily diffusion-weighted MRI signals become sensitive to axon radii. However, diffusion MRI is only capable of estimating a single metric, the effective radius, representing the entire axon radius distribution within a voxel that emphasizes the larger axons. Our findings, both in rodents and humans, enable noninvasive mapping of critical information on axon radii, as well as resolve the long-standing debate on whether axon radii can be quantified.
- Published
- 2020
- Full Text
- View/download PDF
394. Dissociable roles of the inferior longitudinal fasciculus and fornix in face and place perception
- Author
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Carl J Hodgetts, Mark Postans, Jonathan P Shine, Derek K Jones, Andrew D Lawrence, and Kim S Graham
- Subjects
diffusion tensor imaging ,medial temporal lobe ,structure-function ,tractography ,visual perception ,Medicine ,Science ,Biology (General) ,QH301-705.5 - Abstract
We tested a novel hypothesis, generated from representational accounts of medial temporal lobe (MTL) function, that the major white matter tracts converging on perirhinal cortex (PrC) and hippocampus (HC) would be differentially involved in face and scene perception, respectively. Diffusion tensor imaging was applied in healthy participants alongside an odd-one-out paradigm sensitive to PrC and HC lesions in animals and humans. Microstructure of inferior longitudinal fasciculus (ILF, connecting occipital and ventro-anterior temporal lobe, including PrC) and fornix (the main HC input/output pathway) correlated with accuracy on odd-one-out judgements involving faces and scenes, respectively. Similarly, blood oxygen level-dependent (BOLD) response in PrC and HC, elicited during oddity judgements, was correlated with face and scene oddity performance, respectively. We also observed associations between ILF and fornix microstructure and category-selective BOLD response in PrC and HC, respectively. These striking three-way associations highlight functionally dissociable, structurally instantiated MTL neurocognitive networks for complex face and scene perception.
- Published
- 2015
- Full Text
- View/download PDF
395. Individual differences in fornix microstructure and body mass index.
- Author
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Claudia Metzler-Baddeley, Roland J Baddeley, Derek K Jones, John P Aggleton, and Michael J O'Sullivan
- Subjects
Medicine ,Science - Abstract
The prevalence of obesity and associated health conditions is increasing in the developed world. Obesity is related to atrophy and dysfunction of the hippocampus and hippocampal lesions may lead to increased appetite and weight gain. The hippocampus is connected via the fornix tract to the hypothalamus, orbitofrontal cortex, and the nucleus accumbens, all key structures for homeostatic and reward related control of food intake. The present study employed diffusion MRI tractography to investigate the relationship between microstructural properties of the fornix and variation in Body Mass Index (BMI), within normal and overweight ranges, in a group of community-dwelling older adults (53-93 years old). Larger BMI was associated with larger axial and mean diffusivity in the fornix (r = 0.64 and r = 0.55 respectively), relationships that were most pronounced in overweight individuals. Moreover, controlling for age, education, cognitive performance, blood pressure and global brain volume increased these correlations. Similar associations were not found in the parahippocampal cingulum, a comparison temporal association pathway. Thus, microstructural changes in fornix white matter were observed in older adults with increasing BMI levels from within normal to overweight ranges, so are not exclusively related to obesity. We propose that hippocampal-hypothalamic-prefrontal interactions, mediated by the fornix, contribute to the healthy functioning of networks involved in food intake control. The fornix, in turn, may display alterations in microstructure that reflect weight gain.
- Published
- 2013
- Full Text
- View/download PDF
396. In Vivo Evidence of Reduced Integrity of the Gray-White Matter Boundary in Autism Spectrum Disorder.
- Author
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Andrews DS, Avino TA, Gudbrandsen M, Daly E, Marquand A, Murphy CM, Lai MC, Lombardo MV, Ruigrok AN, Williams SC, Bullmore ET, The Mrc Aims Consortium, Suckling J, Baron-Cohen S, Craig MC, Murphy DG, and Ecker C
- Subjects
- Adolescent, Adult, Algorithms, Cerebral Cortex diagnostic imaging, Cerebral Cortex pathology, Female, Functional Laterality, Humans, Image Processing, Computer-Assisted, Magnetic Resonance Imaging, Male, Middle Aged, Sex Characteristics, Young Adult, Autism Spectrum Disorder diagnostic imaging, Autism Spectrum Disorder pathology, Gray Matter diagnostic imaging, Gray Matter pathology, White Matter diagnostic imaging, White Matter pathology
- Abstract
Atypical cortical organization and reduced integrity of the gray-white matter boundary have been reported by postmortem studies in individuals with autism spectrum disorder (ASD). However, there are no in vivo studies that examine these particular features of cortical organization in ASD. Hence, we used structural magnetic resonance imaging to examine differences in tissue contrast between gray and white matter in 98 adults with ASD and 98 typically developing controls, to test the hypothesis that individuals with ASD have significantly reduced tissue contrast. More specifically, we examined contrast as a percentage between gray and white matter tissue signal intensities (GWPC) sampled at the gray-white matter boundary, and across different cortical layers. We found that individuals with ASD had significantly reduced GWPC in several clusters throughout the cortex (cluster, P < 0.05). As expected, these reductions were greatest when tissue intensities were sampled close to gray-white matter interface, which indicates a less distinct gray-white matter boundary in ASD. Our in vivo findings of reduced GWPC in ASD are therefore consistent with prior postmortem findings of a less well-defined gray-white matter boundary in ASD. Taken together, these results indicate that GWPC might be utilized as an in vivo proxy measure of atypical cortical microstructural organization in future studies., (© The Author 2017. Published by Oxford University Press.)
- Published
- 2017
- Full Text
- View/download PDF
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