312 results on '"Yoonkyung Park"'
Search Results
302. Antioxidative constituents from Buddleia officinalis.
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Mei Shan, Piao, Mi -Ran, Kim, Dong Gun, Lee, Yoonkyung, Park, Kyung -Soo, Hahm, Young -Hee, Moon, and Eun -Rhan, Woo
- Abstract
Four flavonoids ( 1–4), a phenylethyl glycoside ( 5), and a phenylpropanoid glycoside ( 6) were isolated from the flowers of Buddleia officinalis (Loganiaceae). Their structures were determined by chemical and spectral analysis. Among the isolated compounds, luteolin ( 1) and acteoside ( 6) exhibited the most potent antioxidative activity on the NBT superoxide scavenging assay. In addition, compounds 1–6 revealed weak antifungal activity, and no hemolytic activity. [ABSTRACT FROM AUTHOR]
- Published
- 2003
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303. Antibacterial activities of peptides designed as hybrids of antimicrobial peptides.
- Author
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Hyung Keun Kim, Dong Gun Lee, Yoonkyung Park, Hee Nam Kim, Bo Hwa Choi, Cheol-Hee Choi, and Kyung-Soo Hahm
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ANTIBACTERIAL agents ,PEPTIDES ,HELICOBACTER pylori ,GRAM-negative bacteria ,GRAM-positive bacteria ,DICHROISM - Abstract
Hybrid peptides (HP-MA, HP-ME), each of 20 residues and incorporating 2–9 residues of Helicobacter pylori ribosomal protein L1 (HP) and 1–12 residues of magainin 2 and melittin, were designed. The antibiotic activities of these peptides were evaluated using bacterial, tumor and human erythrocyte cells. HP-MA had a stronger antibacterial activity against Gram-positive bacteria and Gram-negative bacteria than HP (2-20) and magainin 2, and HP-ME was similar to melittin. None of the hybrids had anti-tumor or hemolytic activity. These peptides were further investigated using an artificial liposomal vesicle and 1,6-diphenyl-1,3,5-hexatriene as a membrane probe, and confirmed to have similar antibacterial activities. The antibacterial effect of these hybrids is probably caused by their ability to damage the bacterial plasma membrane. Additional circular dichroism spectra suggested that the α-helical structure of these peptides plays an important role in their antibiotic effect but that α-helical property is less connected with the enhanced antibiotic activity. [ABSTRACT FROM AUTHOR]
- Published
- 2002
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304. Amphipathic α-helical peptide, HP (2–20), and its analogues derived from Helicobacter pylori: Pore formation mechanism in various lipid compositions
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Lorenzo Stella, John D. Wade, Kyung-Soo Hahm, Song Yub Shin, Mohammed Akhter Hossain, Seong-Cheol Park, Yoonkyung Park, Yangmee Kim, and Mi-Hyun Kim
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Lipopolysaccharides ,Circular dichroism ,Antifungal Agents ,Chitin ,Spheroplasts ,Biochemistry ,Membrane Potentials ,chemistry.chemical_compound ,Protein structure ,Cell Wall ,Yeasts ,Oligomerization ,Cytotoxicity ,HP(2–20) ,Settore CHIM/02 - Chimica Fisica ,Liposome ,Circular Dichroism ,Fluorescent markers ,Lipids ,Anti-Bacterial Agents ,Membrane ,Artificial ,Intercellular Signaling Peptides and Proteins ,medicine.symptom ,Ribosomal Proteins ,Protein Structure ,Helicobacter pylori ,Humans ,Melitten ,Cell Survival ,Permeability ,Peptide Fragments ,Microbial Sensitivity Tests ,Bacteria ,Protein Structure, Quaternary ,Membranes, Artificial ,Hemolysis ,Peptidoglycan ,Peptides ,Cell Line ,Antimicrobial Cationic Peptides ,Biophysics ,Biology ,Mechanism of action ,Pore-forming ,Melittin ,Quaternary ,medicine ,Membranes ,Cell Biology ,chemistry ,Cell culture - Abstract
In a previous study, we determined that HP(2–20) (residues 2–20 of parental HP derived from the N-terminus of Helicobacter pylori Ribosomal Protein L1) and its analogue, HPA3, exhibit broad-spectrum antimicrobial activity. The primary objective of the present study was to gain insight into the relevant mechanisms of action using analogues of HP(2–20) together with model liposomes of various lipid compositions and electron microscopy. We determined that these analogues, HPA3 and HPA3NT3, exert potent antibacterial effects in low-salt buffer and antifungal activity against chitin-containing fungi, while having little or no hemolytic activity or cytotoxicity against mammalian cell lines. Our examination of the interaction of HP(2–20) and its analogues with liposomes showed that the peptides disturb both neutral and negatively-charged membranes, as demonstrated by the release of encapsulated fluorescent markers. The release of fluorescent markers induced by HP(2–20) and its analogues was inversely related to marker size. The pore created by HP(2–20) shows that the radius is approximately 1.8 nm, whereas HPA3, HPA3NT3, and melittin have apparent radii between 3.3 and 4.8 nm. Finally, as shown by electron microscopy, the liposomes and various microbial cells treated with HPA3 and HPA3NT3 showed oligomerization and blebbing similar to that seen with melittin, while HP(2–20) exhibited flabbiness. These results suggest that HP(2–20) may exert its antibiotic effects through a small pore (about 1.8 nm), whereas HPA3 and HPA3NT3 formed pores of a size consistent with those formed by melittin.
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305. Cell specificity, anti-inflammatory activity, and plausible bactericidal mechanism of designed Trp-rich model antimicrobial peptides
- Author
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Ka Hyon Park, Il-Seon Park, Yoonkyung Park, Yong Hai Nan, Kyung-Soo Hahm, Song Yub Shin, and Jae Il Kim
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Lipopolysaccharides ,Stereochemistry ,Antimicrobial peptides ,Biophysics ,Nitric Oxide Synthase Type II ,Peptide ,Microbial Sensitivity Tests ,Bactericidal mechanism ,In Vitro Techniques ,Biology ,Nitric Oxide ,medicine.disease_cause ,Hemolysis ,Biochemistry ,Cell Line ,Cell membrane ,Mice ,Anti-inflammatory activity ,medicine ,Animals ,Humans ,Amino Acid Sequence ,RNA, Messenger ,Escherichia coli ,Peptide sequence ,chemistry.chemical_classification ,Cell specificity ,Trp-rich model antimicrobial peptide ,Macrophages ,Anti-Inflammatory Agents, Non-Steroidal ,Tryptophan ,DNA ,Cell Biology ,Molecular biology ,Spectrometry, Fluorescence ,medicine.anatomical_structure ,chemistry ,Cell culture ,Drug Design ,Liposomes ,Indolicidin ,Oligopeptides ,Intracellular ,Antimicrobial Cationic Peptides - Abstract
To develop novel short Trp-rich antimicrobial peptides (AMPs) with potent cell specificity (targeting bacteria but not eukaryotic cells) and anti-inflammatory activity, a series of 11-meric Trp-rich model peptides with different ratios of Leu and Lys/Arg residues, XXWXXWXXWXX-NH(2) (X indicates Leu or Lys/Arg), was synthesized. K(6)L(2)W(3) displayed an approximately 40-fold increase in cell specificity, compared with the natural Trp-rich AMP indolicidin (IN). Lys-containing peptides (K(8)W(3), K(7)LW(3) and K(6)L(2)W(3)) showed approximately 2- to 4-fold higher cell specificities than did their counterparts, the Arg-containing peptides (R(8)W(3), R(7)LW(3) and R(6)L(2)W(3)), indicating that multiple Lys residues are more important than multiple Arg residues in the design of AMPs with good cell specificity. The excellent resistance of d-enantiomers (K(6)L(2)W(3)-D and R(6)L(2)W(3)-D) and Orn/Nle-containing peptides (O(6)L(2)W(3) and O(6)L(2)W(3)) to trypsin digestion compared with the rapid breakdown of the l-enantiomers (K(6)L(2)W(3) and R(6)L(2)W(3)), highlights the clinical potential of such peptides. K(6)L(2)W(3), R(6)L(2)W(3), K(6)L(2)W(3)-D and R(6)L(2)W(3)-D caused weak dye leakage from bacterial membrane-mimicking negatively charged EYPG/EYPE (7:3, v/v) liposomes. Confocal microscopy showed that these peptides penetrated the cell membrane of Escherichia coli and accumulated in the cytoplasm, as observed for buforin-2. Gel retardation studies revealed that the peptides bound more strongly to DNA than did IN. These results suggested that one possible peptide bactericidal mechanism may relate to the inhibition of intracellular functions via interference with DNA/RNA synthesis. Furthermore, some model peptides, containing K(6)L(2)W(3), K(5)L(3)W(3), R(6)L(2)W(3), O(6)L(2)W(3), O(6)L(2)W(3), and K(6)L(2)W(3)-D inhibited LPS-induced inducible nitric oxide synthase (iNOS) mRNA expression, the release of nitric oxide (NO) following LPS stimulation in RAW264.7 cells and had powerful LPS binding activities at bactericidal concentrations. Collectively, our results indicated that these peptides have potential for future development as novel antimicrobial and anti-inflammatory agents.
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306. The Lipid Dependence of Antimicrobial Peptide Activity Is an Unreliable Experimental Test for Different Pore Models.
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Bobone, Sara, Roversi, Daniela, Giordano, Lorenzo, De Zotti, Marta, Formaggio, Fernando, Toniolo, Claudio, Yoonkyung Park, and Stella, Lorenzo
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- 2012
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307. Increasing Amphiphilicity in Peptaibiotics: Gly to LysReplacements in Trichogin GA IV
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Marta De Zotti, Barbara, Biondi, Cristina Peggion, FERNANDO FORMAGGIO, Yoonkyung, Park, Kyung Soo Hahm, Toniolo, Claudio, and M Lebl, M. Meldal
308. Corrigendum.
- Author
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Okjeong Lee, Sangdan Kim, Jungmin Lee, and Yoonkyung Park
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EARTH system science ,RAIN gardens ,ENVIRONMENTAL engineering ,WATER purification ,RESEARCH departments - Abstract
A correction is presented to the article "Optimal design of bioretention cells using multi-objective optimization technique."
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- 2018
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309. A phage protein-derived antipathogenic peptide that targets type IV pilus assembly.
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In-Young Chung, Bi-o Kim, Ju-Hyun Han, Jonggwan Park, Hee Kyoung Kang, Yoonkyung Park, and You-Hee Cho
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PEPTIDES , *PSEUDOMONAS aeruginosa infections , *N-terminal residues , *PSEUDOMONAS aeruginosa , *BACTERIAL physiology , *DRUG target , *BACTERIOPHAGES - Abstract
Phage-inspired antibacterial discovery is a new approach that recruits phages in search for antibacterials with new molecular targets, in that phages are the biological entities well adapted to hijack host bacterial physiology in favor of their own thrive. We previously observed that phage-mediated twitching motility inhibition was effective to control the acute infections caused by Pseudomonas aeruginosa and that the motility inhibition was attributed to the delocalization of PilB, the type IV pilus (TFP) assembly ATPase by binding of the 136-amino acid (aa) phage protein, Tip. Here, we created a series of truncated and point-mutant Tip proteins to identify the critical residues in the Tip bioactivity: N-terminal 80-aa residues were dispensable for the Tip activity; we identified that Asp82, Leu84, and Arg85 are crucial in the Tip function. Furthermore, a synthetic 15-aa peptide (P1) that corresponds to Leu73 to Ala87 is shown to suffice for PilB delocalization, twitching inhibition, and virulence attenuation upon exogenous administration. The transgenic flies expressing the 15-aa peptide were resistant to P. aeruginosa infections as well. Taken together, this proof-of-concept study reveals a new antipathogenic peptide hit targeting bacterial motility and provides an insight into antibacterial discovery targeting TFP assembly. [ABSTRACT FROM AUTHOR]
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- 2021
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310. Colonization and Infection of the Skin by S. aureus: Immune System Evasion and the Response to Cationic Antimicrobial Peptides.
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Sunhyo Ryu, Song, Peter I., Chang Ho Seo, Hyeonsook Cheong, and Yoonkyung Park
- Subjects
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SKIN infections , *STAPHYLOCOCCUS aureus infections , *METHICILLIN-resistant staphylococcus aureus , *NATURAL immunity , *ANTIMICROBIAL peptides , *ANTI-infective agents , *THERAPEUTICS - Abstract
Staphylococcus aureus (S. aureus) is a widespread cutaneous pathogen responsible for the great majority of bacterial skin infections in humans. The incidence of skin infections by S. aureus reflects in part the competition between host cutaneous immune defenses and S. aureus virulence factors. As part of the innate immune system in the skin, cationic antimicrobial peptides (CAMPs) such as the ß-defensins and cathelicidin contribute to host cutaneous defense, which prevents harmful microorganisms, like S. aureus, from crossing epithelial barriers. Conversely, S. aureus utilizes evasive mechanisms against host defenses to promote its colonization and infection of the skin. In this review, we focus on host-pathogen interactions during colonization and infection of the skin by S. aureus and methicillin-resistant Staphylococcus aureus (MRSA). We will discuss the peptides (defensins, cathelicidins, RNase7, dermcidin) and other mediators (toll-like receptor, IL-1 and IL-17) that comprise the host defense against S. aureus skin infection, as well as the various mechanisms by which S. aureus evades host defenses. It is anticipated that greater understanding of these mechanisms will enable development of more sustainable antimicrobial compounds and new therapeutic approaches to the treatment of S. aureus skin infection and colonization. [ABSTRACT FROM AUTHOR]
- Published
- 2014
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311. Selective Algicidal Action of Peptides against Harmful Algal Bloom Species.
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Seong-Cheol Park, Jong-Kook Lee, Si Wouk Kim, and Yoonkyung Park
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PEPTIDE antibiotics , *PLANKTON blooms , *PLANKTON populations , *ALGAL blooms , *MARINE ecology - Abstract
Recently, harmful algal bloom (HAB), also termed "red tide", has been recognized as a serious problem in marine environments according to climate changes worldwide. Many novel materials or methods to prevent HAB have not yet been employed except for clay dispersion, in which can the resulting sedimentation on the seafloor can also cause alteration in marine ecology or secondary environmental pollution. In the current study, we investigated that antimicrobial peptide have a potential in controlling HAB without cytotoxicity to harmless marine organisms. Here, antimicrobial peptides are proposed as new algicidal compounds in combating HAB cells. HPA3 and HPA3NT3 peptides which exert potent antimicrobial activity via pore forming action in plasma membrane showed that HPA3NT3 reduced the motility of algal cells, disrupted their plasma membrane, and induced the efflux of intracellular components. Against raphidoflagellate such as Heterosigma akashiwo, Chattonella sp., and C. marina, it displayed a rapid lysing action in cell membranes at 1∼4 μM within 2 min. Comparatively, its lysing effects occurred at 8 μM within 1 h in dinoflagellate such as Cochlodium polykrikoides, Prorocentrum micans, and P. minimum. Moreover, its lysing action induced the lysis of chloroplasts and loss of chlorophyll a. In the contrary, this peptide was not effective against Skeletonema costatum, harmless algal cell, even at 256 μM, moreover, it killed only H. akashiwo or C. marina in co-cultivation with S. costatum, indicating to its selective algicidal activity between harmful and harmless algal cells. The peptide was non-hemolytic against red blood cells of Sebastes schlegeli, the black rockfish, at 120 μM. HAB cells were quickly and selectively lysed following treatment of antimicrobial peptides without cytotoxicity to harmless marine organisms. Thus, the antibiotic peptides examined in our study appear to have much potential in effectively controlling HAB with minimal impact on marine ecology. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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312. Antimicrobial and Anti-Inflammatory Effects of Cecropin A(1-8)-Magainin2(1-12) Hybrid Peptide Analog P5 against Malassezia furfur Infection in Human Keratinocytes.
- Author
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Sunhyo Ryu, Soon-Yong Choi, Acharya, Samudra, Young-Jin Chun, Gurley, Catherine, Yoonkyung Park, Armstrong, Cheryl A., Song, Peter I., and Beom-Joon Kim
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ANTI-infective agents , *ANTI-inflammatory agents , *KERATINOCYTES , *KETOCONAZOLE , *SKIN diseases - Abstract
The lipophilic fungus Malassezia furfur (M. furfur) is a commensal microbe associated with several chronic diseases such as pityriasis versicolor, folliculitis, and seborrheic dermatitis. Because M. furfur-related diseases are difficult to treat and require prolonged use of medications, the treatment for M. furfur-related skin diseases is supposed to gain control over M. furfur growth and the inflammation associated with it, as well as to prevent secondary infections. In this study, we investigated the antifungal and anti-inflammatory effects of cecropin A(1-8)-magainin 2(1-12) hybrid peptide analog P5 on M. furfur. The minimal inhibitory concentration of P5 against M. furfur was 0.39 μM, making it 3-4 times more potent than commonly used antifungal agents such as ketoconazole (1.5 μM) or itraconazole (1.14 μM). P5 efficiently inhibited the expression of IL-8 and Toll-like receptor 2 in M. furfur-infected human keratinocytes without eukaryotic cytotoxicity at its fungicidal concentration. Moreover, P5 significantly downregulated NF-κB activation and intracellular calcium fluctuation, which are closely related with enhanced responses of keratinocyte inflammation induced by M. furfur infection. Taken together, these observations suggest P5 may be a potential therapeutic agent for M. furfur-associated human skin diseases because of its distinct antifungal and anti-inflammatory action. [ABSTRACT FROM AUTHOR]
- Published
- 2011
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