323 results on '"Jacquet, D."'
Search Results
302. Differences between fast and slow explorers in short-term tail temperature responses to handling in a rodent of wild origin.
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Duparcq M, Jean O, Verjat A, Jaravel L, Jacquet D, Robles Guerrero F, Féron C, and Rödel HG
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- Animals, Animals, Outbred Strains, Animals, Wild, Behavior, Animal, Female, Individuality, Male, Mice, Rodentia, Stress, Psychological physiopathology, Temperature, Thermography methods, Body Temperature physiology, Exploratory Behavior physiology, Stress, Physiological physiology
- Abstract
Animals of different behavioral types typically show associated differences in their physiological stress response, including differential reactivity of the sympathetic nervous system. Infrared thermography offers the possibility to explore this link in a non-invasive way via the quantification of fine-scale changes in peripheral body temperature due to changes in cutaneous blood flow. We used this technique to investigate the association between exploration tendency, a behavioral trait frequently used to phenotype mammals and birds, and short-term thermal responses to challenge in a small rodent of wild origin, the mound-building mouse (Mus spicilegus). We applied a brief handling procedure consisting in the transfer of subjects into a small arena. This procedure led to a significant increase in subjects' maximum peripheral body temperature (mainly reflecting the temperature of the eyes) and to significant decreases in maximum temperatures at different positions on the tail. Maximum peripheral body and tail temperatures showed significant individual-level consistencies in response to repeated applications of the handling procedure, suggesting stable individual differences in the animals' sympathetic activity. We then compared the thermal responses to handling between 'fast' and 'slow' explorers, who were phenotyped through repeated open field and novel object tests. Fast explorers showed significantly lower tail temperatures than slow explorers shortly after handling, suggesting a stronger sympathetic reactivity in the former. Comparisons within sibling groups kept in different cages showed that the differences between explorer types were particularly pronounced during the first minute after handling, and increased in magnitude along the first millimeters distal to the tail base., (Copyright © 2019 Elsevier B.V. All rights reserved.)
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- 2019
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303. Sensitivity and specificity of HAT Sero-K-SeT, a rapid diagnostic test for serodiagnosis of sleeping sickness caused by Trypanosoma brucei gambiense: a case-control study.
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Büscher P, Mertens P, Leclipteux T, Gilleman Q, Jacquet D, Mumba-Ngoyi D, Pyana PP, Boelaert M, and Lejon V
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- Adult, Agglutination Tests standards, Animals, Antibodies, Protozoan blood, Case-Control Studies, Diagnostic Tests, Routine standards, Female, Gambia, Hemagglutination Tests methods, Humans, Male, Mass Screening methods, Middle Aged, Sensitivity and Specificity, Serologic Tests standards, Young Adult, Diagnostic Tests, Routine methods, Serologic Tests methods, Trypanosoma brucei gambiense immunology, Trypanosomiasis, African blood
- Abstract
Background: Human African trypanosomiasis (HAT) is a life-threatening infection affecting rural populations in sub-Saharan Africa. Large-scale population screening by antibody detection with the Card Agglutination Test for Trypanosomiasis (CATT)/Trypanosoma brucei (T b) gambiense helped reduce the number of reported cases of gambiense HAT to fewer than 10 000 in 2011. Because low case numbers lead to decreased cost-effectiveness of such active screening, we aimed to assess diagnostic accuracy of a rapid serodiagnostic test (HAT Sero-K-SeT) applicable in primary health-care centres., Methods: In our case-control study, we assessed participants older than 11 years who presented for HAT Sero-K-SeT and CATT/T b gambiense at primary care centres or to mobile teams (and existing patients with confirmed disease status at these centres) in Bandundu Province, DR Congo. We defined cases as patients with trypanosomes that had been identified in lymph node aspirate, blood, or cerebrospinal fluid. During screening, we recruited controls without previous history of HAT or detectable trypanosomes in blood or lymph who resided in the same area as the cases. We assessed diagnostic accuracy of three antibody detection tests for gambiense HAT: HAT Sero-K-SeT and CATT/T b gambiense (done with venous blood at the primary care centres) and immune trypanolysis (done with plasma at the Institute of Tropical Medicine, Antwerp, Belgium)., Findings: Between June 6, 2012, and Feb 25, 2013, we included 134 cases and 356 controls. HAT Sero-K-SeT had a sensitivity of 0·985 (132 true positives, 95% CI 0·947-0·996) and a specificity of 0·986 (351 true negatives, 0·968-0·994), which did not differ significantly from CATT/T b gambiense (sensitivity 95% CI 0·955, 95% CI 0·906-0·979 [128 true positives] and specificity 0·972, 0·949-0·985 [346 true negatives]) or immune trypanolysis (sensitivity 0·985, 0·947-0·996 [132 true positives] and specificity 0·980, 0·960-0·990 [349 true negatives])., Interpretation: The diagnostic accuracy of HAT Sero-K-SeT is adequate for T b gambiense antibody detection in local health centres and could be used for active screening whenever a cold chain and electricity supply are unavailable and CATT/T b gambiense cannot be done., (Copyright © 2014 Büscher et al. Open Access article distributed under the terms of CC BY-NC-ND. Published by .. All rights reserved.)
- Published
- 2014
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304. X-ray fluorescence from the element with atomic number Z=120.
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Frégeau MO, Jacquet D, Morjean M, Bonnet E, Chbihi A, Frankland JD, Rivet MF, Tassan-Got L, Dechery F, Drouart A, Nalpas L, Ledoux X, Parlog M, Ciortea C, Dumitriu D, Fluerasu D, Gugiu M, Gramegna F, Kravchuk VL, Marchi T, Fabris D, Corsi A, and Barlini S
- Abstract
An atomic clock based on x-ray fluorescence yields has been used to estimate the mean characteristic time for fusion followed by fission in reactions 238U + 64Ni at 6.6 MeV/A. Inner shell vacancies are created during the collisions in the electronic structure of the possibly formed Z=120 compound nuclei. The filling of these vacancies accompanied by a x-ray emission with energies characteristic of Z=120 can take place only if the atomic transitions occur before nuclear fission. Therefore, the x-ray yield characteristic of the united atom with 120 protons is strongly related to the fission time and to the vacancy lifetimes. K x rays from the element with Z=120 have been unambiguously identified from a coupled analysis of the involved nuclear reaction mechanisms and of the measured photon spectra. A minimum mean fission time τ(f)=2.5×10(-18) s has been deduced for Z=120 from the measured x-ray multiplicity.
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- 2012
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305. Leishmaniasis direct agglutination test: using pictorials as training materials to reduce inter-reader variability and improve accuracy.
- Author
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Adams ER, Jacquet D, Schoone G, Gidwani K, Boelaert M, and Cunningham J
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- Africa, Eastern, Asia, Health Services Research, Humans, Laboratory Proficiency Testing, Latin America, Observer Variation, Sensitivity and Specificity, Agglutination Tests methods, Agglutination Tests standards, Leishmaniasis, Visceral diagnosis, Parasitology education, Parasitology methods
- Abstract
Background: The Direct Agglutination Test (DAT) has a high diagnostic accuracy and remains, in some geographical areas, part of the diagnostic algorithm for Visceral Leishmaniasis (VL). However, subjective interpretation of results introduces potential for inter-reader variation. We report an assessment of inter-laboratory agreement and propose a pictorial-based approach to standardize reading of the DAT., Methodology: In preparation for a comparative evaluation of immunochromatographic diagnostics for VL, a proficiency panel of 15 well-characterized sera, DAT-antigen from a single batch and common protocol was sent to nine laboratories in Latin-America, East-Africa and Asia. Agreement (i.e., equal titre or within 1 titer) with the reading by the reference laboratory was computed. Due to significant inter-laboratory disagreement on-site refresher training was provided to all technicians performing DAT. Photos of training plates were made, and end-titres agreed upon by experienced users of DAT within the Visceral-Leishmaniasis Laboratory-Network (VL-LN)., Results: Pre-training, concordance in DAT results with reference laboratories was only 50%, although agreement on negative sera was high (94%). After refresher training concordance increased to 84%; agreement on negative controls increased to 98%. Variance in readings significantly decreased after training from 3.3 titres to an average of 1.0 titre (two-sample Wilcoxon rank-sum (Mann-Whitney) test (z = -3,624 and p = 0.0003))., Conclusion: The most probable explanation for disagreement was subjective endpoint reading. Using pictorials as training materials may be a useful tool to reduce disparity in results and promote more standardized reading of DAT, without compromising diagnostic sensitivity.
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- 2012
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306. [Verbal expression of pain in children: intermodal comparison between pain sensation and tactile manipulation].
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Bienvenu M, Jacquet D, Michelutti M, and Wood C
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- Adolescent, Age Factors, Child, Child, Preschool, Female, Humans, Male, Pain Measurement methods, Physical Stimulation adverse effects, Physical Stimulation methods, Sensory Thresholds physiology, Surveys and Questionnaires, Pain physiopathology, Pain psychology, Pain Perception physiology, Touch physiology, Verbal Behavior physiology
- Abstract
Background: The present study was set in the context of verbal pain expression in children and concerns, more exactly, the qualitative dimension of painful sensations., Objective: To identify the peculiarities of verbal expressions related to the qualitative aspect of pain., Methods: Sixty patients presenting with pain at a university pediatric hospital were included in the study. Their ages ranged from four to 18 years. The origin of sensorial pain descriptors was confirmed, reflecting the past perceptive experiences of children that are not necessarily painful. These experiences are characterized as prototypes because, although they are related to various contexts of life, their type of interaction with the world does not vary., Results: In such a context, pinching, tugging, palpitation, squashing and pressing, tingling and squeezing each convey particular sensorial and motor experiences whose basic structure does not change from one situation to another. The results also showed that from four years of age onward, children are able to compare and recognize an analogy between an exclusively tactile experience and their painful sensation., Conclusion: The results emphasize the central role of analogical reasoning in the verbal expression of pain, showing that the level of cognitive development is not an a priori determinant variable for qualifying pain.
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- 2011
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307. Fission time measurements: a new probe into superheavy element stability.
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Morjean M, Jacquet D, Charvet JL, L'Hoir A, Laget M, Parlog M, Chbihi A, Chevallier M, Cohen C, Dauvergne D, Dayras R, Drouart A, Escano-Rodriguez C, Frankland JD, Kirsch R, Lautesse P, Nalpas L, Ray C, Schmitt C, Stodel C, Tassan-Got L, Testa E, and Volant C
- Abstract
Reaction mechanism analyses performed with a 4pi detector for the systems 208Pb + Ge, 238U + Ni and 238U + Ge, combined with analyses of the associated reaction time distributions, provide us with evidence for nuclei with Z=120 and 124 living longer than 10(-18) s and arising from highly excited compound nuclei. By contrast, the neutron deficient nuclei with Z=114 possibly formed in 208Pb + Ge reactions have shorter lifetimes, close to or below the sensitivity limit of the experiment.
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- 2008
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308. Estimating divergence times in large phylogenetic trees.
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Britton T, Anderson CL, Jacquet D, Lundqvist S, and Bremer K
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- Computer Simulation, Fossils, Likelihood Functions, Plants classification, Software, Models, Biological, Phylogeny
- Abstract
A new method, PATHd8, for estimating ultrametric trees from trees with edge (branch) lengths proportional to the number of substitutions is proposed. The method allows for an arbitrary number of reference nodes for time calibration, each defined either as absolute age, minimum age, or maximum age, and the tree need not be fully resolved. The method is based on estimating node ages by mean path lengths from the node to the leaves but correcting for deviations from a molecular clock suggested by reference nodes. As opposed to most existing methods allowing substitution rate variation, the new method smoothes substitution rates locally, rather than simultaneously over the whole tree, thus allowing for analysis of very large trees. The performance of PATHd8 is compared with other frequently used methods for estimating divergence times. In analyses of three separate data sets, PATHd8 gives similar divergence times to other methods, the largest difference being between crown group ages, where unconstrained nodes get younger ages when analyzed with PATHd8. Overall, chronograms obtained from other methods appear smoother, whereas PATHd8 preserves more of the heterogeneity seen in the original edge lengths. Divergence times are most evenly spread over the chronograms obtained from the Bayesian implementation and the clock-based Langley-Fitch method, and these two methods produce very similar ages for most nodes. Evaluations of PATHd8 using simulated data suggest that PATHd8 is slightly less precise compared with penalized likelihood, but it gives more sensible answers for extreme data sets. A clear advantage with PATHd8 is that it is more or less instantaneous even with trees having several thousand leaves, whereas other programs often run into problems when analyzing trees with hundreds of leaves. PATHd8 is implemented in freely available software.
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- 2007
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309. Clonal propagation and the fast generation of karyotype diversity: An in vitro Leishmania model.
- Author
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Dujardin JC, De Doncker S, Jacquet D, Bañuls AL, Balavoine M, Van Bockstaele D, Tibayrenc M, Arevalo J, and Le Ray D
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- Animals, Clone Cells, Culture Techniques, Karyotyping, Leishmania chemistry, Leishmania cytology, Leishmania growth & development, Leishmania braziliensis cytology, Leishmania braziliensis growth & development, Life Cycle Stages, Models, Biological, Ploidies, Chromosomes ultrastructure, Genome, Protozoan, Leishmania genetics, Leishmania braziliensis genetics
- Abstract
In the present work we studied the karyotype stability during long-term in vitro maintenance in 3 cloned strains of Leishmania (Viannia) peruviana, Leishmania (Viannia) braziliensis and a hybrid between both species. Only the L. (V.) peruviana strain showed an unstable karyotype, even after subcloning. Four chromosomes were studied in detail, each of them characterized by homologous chromosomes of different size (heteromorphy). Variations in chromosome patterns during in vitro maintenance were rapid and discrete, involving loss of heteromorphy or appearance of additional chromosome size variants. The resulting pattern was not the same according to experimental conditions (subinoculation rate or incubation temperature), and interestingly, this was associated with differences in growth behaviour of the respective parasites. No change in total ploidy of the cells was observed by flow cytometry. We discuss several mechanisms that might account for this variation of chromosome patterns, but we favour the occurrence of aneuploidy, caused by aberrant chromosome segregation during mitosis. Our results provide insight into the generation of karyotype diversity in natural conditions and highlight the relativity of the clone concept in parasitology.
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- 2007
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310. Comparative evaluation of freeze-dried and liquid antigens in the direct agglutination test for serodiagnosis of visceral leishmaniasis (ITMA-DAT/VL).
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Jacquet D, Boelaert M, Seaman J, Rijal S, Sundar S, Menten J, and Magnus E
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- Agglutination Tests methods, Animals, Drug Stability, Freeze Drying, Humans, Reproducibility of Results, Antigens, Protozoan immunology, Leishmania donovani immunology, Leishmaniasis, Visceral diagnosis
- Abstract
Objective: The direct agglutination test (DAT) for visceral leishmaniasis (VL) with liquid (LQ) antigen is known to be only moderately reproducible because of inter-observer and batch-to-batch variability as well as its sensitivity to temperature and shaking during transport. We evaluated a DAT with freeze-dried (FD) antigen and compared it with the LQ antigen version., Methods: Blood samples of clinical VL suspects and healthy endemic controls were collected in Sudan, Nepal and India. Both test versions were performed in duplicate in the respective countries and in the reference laboratory. Interbatch variability and stability tests were conducted and agreement was examined within and between centres on a dichotomic scale by Cohen's kappa as well as on a continuous scale through Bland-Altman plots., Results: The FD antigen remains fully active even after storage at 45 degrees C for 24 months. Using a cut-off titre of 1:6400, the agreement between the FD and the LQ formats was excellent., Conclusion: The major advantages of FD antigen are its better stability at higher temperatures and its longer shelf life, which make it much more suitable than the LQ version for use in the field.
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- 2006
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311. Infrared specular reflection spectroscopy of rough metallic substrates.
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Caron J and Jacquet D
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- Computer Simulation, Metals analysis, Metals chemistry, Surface Properties, Algorithms, Models, Chemical, Refractometry methods, Spectroscopy, Fourier Transform Infrared methods, Steel analysis, Steel chemistry
- Abstract
A study of the infrared reflectance of rough metallic surfaces is presented. We show that one reflectance measurement, made in the specular direction under specific conditions, allows the accurate calculation of the shape of the roughness histogram. As a theoretical background, we use modified expressions from Kirchhoff theory for surface scattering. To illustrate our method, we present experimental results obtained with surfaces having a multimode histogram, which means having several different populations with distinct peaks. For these surfaces, we observe oscillations in the regularly decreasing reflectance (with decreasing wavelength) that are created by a partial interference phenomenon between the peaks. To our knowledge, this effect is presented for the first time in the literature. Our study demonstrates that some very useful information can be obtained in the infrared spectrum of metallic substrates, although they do not have any absorption band. We hope that our results help further the understanding of complex spectral data obtained on such scattering substrates covered with organic films.
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- 2005
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312. A new PCR-ELISA for diagnosis of visceral leishmaniasis in blood of HIV-negative subjects.
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De Doncker S, Hutse V, Abdellati S, Rijal S, Singh Karki BM, Decuypere S, Jacquet D, Le Ray D, Boelaert M, Koirala S, and Dujardin JC
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- Animals, DNA, Protozoan analysis, DNA, Ribosomal analysis, Endemic Diseases prevention & control, Humans, Leishmania donovani genetics, Leishmania donovani isolation & purification, Leishmaniasis, Visceral epidemiology, Leishmaniasis, Visceral parasitology, Nepal epidemiology, Sensitivity and Specificity, Enzyme-Linked Immunosorbent Assay methods, HIV Seronegativity physiology, Leishmaniasis, Visceral diagnosis, Polymerase Chain Reaction methods
- Abstract
The PCR-ELISA represents a promising advance for diagnosis of visceral leishmaniasis (VL) in blood samples. However, the method has been validated mostly with HIV-positive patients who are known to have high levels of parasitaemia. We developed a new PCR-ELISA assay for specific detection of Leishmania in patients' blood and validated it in Nepalese subjects with clinically suspected VL, almost all of whom were HIV-negative. For blood samples, PCR-ELISA was more sensitive (83.9%) than conventional PCR (73.2%), and demonstrated 100% and 87.2% specificity when using healthy controls who had never travelled to a VL-endemic area and controls from a VL-endemic area as references, respectively. We have demonstrated the ability of PCR-ELISA to detect parasites in blood of HIV-negative patients. The method could be used for epidemiological as well as clinical purposes, as it reduces the need for traumatic bone marrow sampling and risky spleen aspiration.
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- 2005
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313. Suppressor of cytokine signaling 3 expression and insulin resistance in skeletal muscle of obese and type 2 diabetic patients.
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Rieusset J, Bouzakri K, Chevillotte E, Ricard N, Jacquet D, Bastard JP, Laville M, and Vidal H
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- Adipose Tissue physiology, Adult, Cells, Cultured, Diabetes Mellitus physiopathology, Diabetes Mellitus, Type 2 physiopathology, Female, Gene Expression drug effects, Humans, Hyperglycemia metabolism, Hyperglycemia physiopathology, Insulin Resistance, Interleukin-6 blood, Interleukin-6 pharmacology, Male, Middle Aged, Muscle Fibers, Skeletal cytology, Muscle Fibers, Skeletal metabolism, Muscle, Skeletal cytology, RNA, Messenger analysis, Repressor Proteins genetics, Signal Transduction physiology, Suppressor of Cytokine Signaling 3 Protein, Suppressor of Cytokine Signaling Proteins, Transcription Factors genetics, Diabetes Mellitus metabolism, Diabetes Mellitus, Type 2 metabolism, Insulin metabolism, Muscle, Skeletal metabolism, Obesity, Repressor Proteins metabolism, Transcription Factors metabolism
- Abstract
Interleukin-6 (IL-6) could be a possible mediator of insulin resistance. We investigated whether IL-6 could inhibit insulin signaling in human skeletal myotubes and whether suppressor of cytokine signaling 3 (SOCS-3) could be related to insulin resistance in vivo in humans. IL-6 inhibited insulin signaling and induced SOCS-3 expression in differentiated myotubes. SOCS-3 mRNA levels were significantly increased in the skeletal muscle of type 2 diabetic patients compared with control subjects and correlated with reduced insulin-stimulated glucose uptake. In contrast, SOCS-3 mRNA levels were reduced in muscle of obese nondiabetic subjects compared with type 2 diabetic patients, despite similar circulating concentrations of IL-6. Increased SOCS-3 mRNA levels in diabetes were not attributable to hyperglycemia, as type 1 diabetic patients had normal SOCS-3 mRNA expression in muscle. However, the combination of high glucose and IL-6 levels in type 2 diabetic patients may induce SOCS-3 expression, as has been seen in human muscle cells. In subcutaneous adipose tissue, SOCS-3 mRNA levels were increased in obese individuals and strongly correlated with IL-6 expression, supporting a paracrine effect of IL-6 on SOCS-3 expression in fat. Taken together, our results showed that SOCS-3 expression in human skeletal muscle in vivo is not related to insulin resistance in the presence of elevated IL-6 concentrations and suggest that cytokine action could differ in type 2 diabetic patients and nondiabetic obese subjects.
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- 2004
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314. Evaluation of a urinary antigen-based latex agglutination test in the diagnosis of kala-azar in eastern Nepal.
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Rijal S, Boelaert M, Regmi S, Karki BM, Jacquet D, Singh R, Chance ML, Chappuis F, Hommel M, Desjeux P, Van der Stuyft P, Le Ray D, and Koirala S
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- Adult, Antigens, Protozoan urine, Humans, Leishmaniasis, Visceral epidemiology, Leishmaniasis, Visceral urine, Nepal epidemiology, Prospective Studies, Reproducibility of Results, Sensitivity and Specificity, Latex Fixation Tests methods, Leishmaniasis, Visceral diagnosis
- Abstract
Background: We evaluated the diagnostic accuracy as well as the reproducibility of the urine latex agglutination test 'KAtex' in the diagnosis of kala-azar in patients recruited at a tertiary care centre in Dharan, Nepal, between November 2000 and January 2002., Methods: All patients presenting with fever of 2 weeks or more and splenomegaly were consecutively enrolled. Bone marrow and--if negative--spleen aspirates were examined for Leishmania donovani. Serum and urine samples were taken in duplicate for the Direct Agglutination Test (DAT) and KAtex. The reference laboratory determined sensitivity and specificity of KAtex. Reproducibility between both laboratories was assessed., Results: KAtex was performed on urine from 155 parasitologically confirmed kala-azar and 77 non-kala-azar cases (parasitology and DAT-negative). KAtex showed a sensitivity of 47.7% (74/155, 95% CI: 39.7-55.9) and a specificity of 98.7% (76/77, 95% CI: 93.0-100.0). Reproducibility of KAtex showed a kappa of 0.684 (P < 0.001, n = 232)., Conclusion: KAtex evaluation showed high specificity, low sensitivity and moderate reproducibility. A urine test for kala-azar could become a real breakthrough in kala-azar management if its reproducibility and sensitivity could be further improved.
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- 2004
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315. A comparative study of the effectiveness of diagnostic tests for visceral leishmaniasis.
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Boelaert M, Rijal S, Regmi S, Singh R, Karki B, Jacquet D, Chappuis F, Campino L, Desjeux P, Le Ray D, Koirala S, and Van der Stuyft P
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- Adolescent, Adult, Agglutination Tests, Animals, Antibodies, Protozoan blood, Bone Marrow parasitology, Female, Fluorescent Antibody Technique, Indirect, Formaldehyde, Humans, Male, Models, Statistical, Pancytopenia parasitology, Reagent Kits, Diagnostic, Sensitivity and Specificity, Spleen parasitology, Leishmania donovani isolation & purification, Leishmaniasis, Visceral diagnosis
- Abstract
We compared the validity of pancytopenia, the formol-gel test (FGT), the indirect fluorescence antibody test (IFAT), the direct agglutination test (DAT), and the rK39 dipstick test as diagnostic criteria for visceral leishmaniasis (VL) in Nepal. Between September 2000 and January 2002, 310 clinical suspects had a bone marrow aspirate, and if negative, a spleen aspirate smear examined for Leishmania donovani. Sensitivity and specificity of all tests were determined compared with parasitology and by latent class analysis (LCA). Compared with parasitology, the sensitivities of the other tests were as follows: pancytopenia = 16.3% (95% confidence interval [CI] = 11.3-22.5%), FGT = 39.9% (95% CI = 32.7-47.4%), IFAT = 28.4% (95% CI = 22.0-35.5%), DAT = 95.1% (95% CI = 90.8-97.7%), and the rK39 dipstick test = 87.4% (95% CI = 81.7-91.9%). Sensitivity estimates obtained by LCA were similar, but specificity estimates were substantially higher (DAT = 93.7% versus 77.8%; rK39 dipstick test = 93.1% versus 77.0%). The DAT or the rK39 dipstick test can replace parasitology as the basis of a decision to treat VL in Nepalese peripheral health services.
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- 2004
316. Orthogonal time-of-flight secondary ion mass spectrometric analysis of peptides using large gold clusters as primary ions.
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Tempez A, Schultz JA, Della-Negra S, Depauw J, Jacquet D, Novikov A, Lebeyec Y, Pautrat M, Caroff M, Ugarov M, Bensaoula H, Gonin M, Fuhrer K, and Woods A
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- Dynorphins analysis, Dynorphins chemistry, Gastrins analysis, Gastrins chemistry, Gramicidin analysis, Gramicidin chemistry, Ions chemistry, Peptides chemistry, Spectrometry, Mass, Secondary Ion, Gold chemistry, Mass Spectrometry methods, Peptides analysis
- Abstract
Secondary ion mass spectrometry (SIMS) for biomolecular analysis is greatly enhanced by the instrumental combination of orthogonal extraction time-of-flight mass spectrometry with massive gold cluster primary ion bombardment. Precursor peptide molecular ion yield enhancements of 1000, and signal-to-noise improvements of up to 20, were measured by comparing SIMS spectra obtained using Au(+) and massive Au(400) (4+) cluster primary ion bombardment of neat films of the neuropeptide fragment dynorphin 1-7. Remarkably low damage cross-sections were also measured from dynorphin 1-7 and gramicidin S during prolonged bombardment with 40 keV Au(400) (4+). For gramicidin S, the molecular ion yield increases slightly as a function of Au(400) (4+) beam fluence up to at least 2 x 10(13) Au(400) (4+)/cm(2). This is in marked contrast to the rapid decrease observed when bombarding with ions such as Au(5) (+) and Au(9) (+). When gramicidin S is impinged with Au(5) (+), the molecular ion yield decreases by a factor of 10 after a fluence of only 8 x 10(12) ions/cm(2). Comparison of these damage cross-sections implies that minimal surface damage occurs during prolonged Au(400) (4+) bombardment. Several practical analytical implications are drawn from these observations., (Copyright 2004 John Wiley & Sons, Ltd.)
- Published
- 2004
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317. A neglected disease of humans: a new focus of visceral leishmaniasis in Bakool, Somalia.
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Marlet MV, Wuillaume F, Jacquet D, Quispe KW, Dujardin JC, and Boelaert M
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- Adolescent, Adult, Age Distribution, Aged, Animals, Antimony Sodium Gluconate therapeutic use, Antiprotozoal Agents therapeutic use, Child, Child, Preschool, Cysteine Endopeptidases genetics, Female, Humans, Infant, Leishmaniasis, Visceral drug therapy, Male, Middle Aged, Prevalence, Retrospective Studies, Sex Distribution, Somalia epidemiology, Leishmania donovani enzymology, Leishmania donovani genetics, Leishmaniasis, Visceral epidemiology
- Abstract
Visceral leishmaniasis (VL) was observed in children in Bakool region, Somalia, an area where VL has not been reported before. We describe the extent of the problem in this war- and famine-stricken area. A retrospective analysis was done of all cases admitted to a VL treatment centre between July 2000 and August 2001. Patients with longstanding fever, splenomegaly and a positive direct agglutination test (DAT; titre > 1:3200) were treated as suspected VL cases. A rapid epidemiological and entomological assessment was performed in the area. Species identification was attempted from blood samples by polymerase chain reaction-restriction fragment length polymorphism analysis of cysteine proteinase B genes. In 1 year, 230 serologically-positive cases were diagnosed as VL, and response to therapy was good in 91.6% of the 225 treated with sodium stibogluconate. Parasitological confirmation was attempted and obtained in 2 cases. Parasites were found to be most similar to Sudanese and Ethiopian reference strains of the Leishmania donovani complex. In a serological survey of 161 healthy displaced persons, 15% were positive by the leishmanin skin test and 3 (2%) were positive by the DAT. The sandfly captures showed Phlebotomus martini and P. vansomerenae. VL seems to be a longstanding and serious health problem in Bakool region. Food insecurity might have contributed to the emergence and detection of VL in this area.
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- 2003
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318. Is Leishmania (Viannia) peruviana a distinct species? A MLEE/RAPD evolutionary genetics answer.
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Bañuls AL, Dujardin JC, Guerrini F, De Doncker S, Jacquet D, Arevalo J, Noël S, Le Ray D, and Tibayrenc M
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- Animals, Electrophoresis methods, Enzymes genetics, Genotype, Humans, Leishmania enzymology, Leishmania genetics, Peru, Phenotype, Phylogeny, Psychodidae parasitology, Random Amplified Polymorphic DNA Technique, Leishmania classification
- Abstract
A set of 38 Leishmania stocks from the Andean valleys of Peru was characterized by both Multilocus Enzyme Electrophoresis (MLEE) and Random Amplified Polymorphic DNA (RAPD). Data were analyzed in terms of taxonomy and evolutionary genetics. Synapomorphic MLEE and RAPD characters, clear-cut clustering, and strong agreement between the phylogenies inferred from either MLEE or RAPD supported the view that Leishmania (Viannia) peruviana and Leishmania (Viannia) braziliensis correspond to two closely related, but distinct monophyletic lines (clades) and can therefore be considered as "discrete typing units" (DTUs). The question whether the L. (V.) peruxviana DTU deserves species status is dependent upon the desirability of it, in terms of epidemiological and medical relevance. A previous Orthogonal Field Alternating Gel Electrophoresis (OFAGE) analysis of the same L. (V.) peruviana isolates was published by Dujardin et al. (1995b). The data from the different markers (i.e. MLEE, RAPD and OFAGE) were compared by population genetics analysis. RAPD and OFAGE provided divergent results, since RAPD showed a strong linkage disequilibrium whereas OFAGE revealed no apparent departure from panmictic expectation. MLEE showed no linkage disequilibrium. Nevertheless, contrary to OFAGE, this is most probably explainable by the limited variability revealed by this marker in L. (V.) peruviana (statistical type II error). RAPD data were consistent with the hypothesis that the present L. (V.) peruviana sample displays a basically clonal population structure with limited or no genetic exchange. Disagreement between RAPD and OFAGE can be explained either by accumulation of chromosomal rearrangements due to amplification/deletion of repeated sequences, or by pseudo-recombinational events.
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- 2000
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319. Putative Leishmania hybrids in the Eastern Andean valley of Huanuco, Peru.
- Author
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Dujardin JC, Bañuls AL, Llanos-Cuentas A, Alvarez E, DeDoncker S, Jacquet D, Le Ray D, Arevalo J, and Tibayrenc M
- Subjects
- Animals, Base Sequence, Humans, Isoenzymes analysis, Karyotyping, Leishmania enzymology, Leishmania genetics, Leishmania braziliensis enzymology, Leishmania braziliensis genetics, Molecular Sequence Data, Peru, Phylogeny, Protozoan Proteins analysis, Random Amplified Polymorphic DNA Technique, Leishmania classification, Leishmania braziliensis classification, Leishmaniasis, Cutaneous parasitology
- Abstract
During an outbreak of tegumentary leishmaniasis that developed in the 1990s in the Eastern Andean valley of Huanuco, Peru, the coexistence of Andean (uta) and sylvatic leishmaniases was suspected for ecological and geographical reasons, and sympatric sampling was carried out. Seven human isolates of Leishmania were characterized by multilocus enzyme electrophoresis, random amplification of polymorphic DNA and molecular karyotyping. The three methods identified 3 isolates as L. braziliensis, and 4 isolates as putative hybrids with characters of L. braziliensis and L. peruviana. Data from Huanuco are compared to previous results from other areas endemic for uta. Biological and epidemiological implications are discussed.
- Published
- 1995
- Full Text
- View/download PDF
320. Molecular karyotype variation in Leishmania (Viannia) peruviana: indication of geographical populations in Peru distributed along a north-south cline.
- Author
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Dujardin JC, Llanos-Cuentas A, Caceres A, Arana M, Dujardin JP, Guerrini F, Gomez J, Arroyo J, De Doncker S, and Jacquet D
- Subjects
- Animals, Chromosome Banding, DNA, Protozoan analysis, Karyotyping, Leishmania classification, Leishmania braziliensis genetics, Nucleic Acid Hybridization, Peru, Polymorphism, Genetic, Leishmania genetics
- Abstract
Forty-one Leishmania peruviana isolates were selected along a north-south transect which crossed areas endemic for uta in three different biogeographical regions in the Peruvian Andes. The isolates were analysed by molecular karyotyping and hybridization with three chromosome-derived DNA probes. All the isolates could be distinguished from L. braziliensis by their pLb-134 hybridization patterns. However, the patterns with the other probes (pLb-168 and -22) could be used to cluster the Peruvian isolates in discrete groups (karyodemes) which varied in their level of similarity with L. braziliensis. The geographical distribution of these karyodemes supports the hypothesis that eco-graphical isolation has contributed to the heterogeneity of L. peruviana.
- Published
- 1993
- Full Text
- View/download PDF
321. Karyotype polymorphism and conserved characters in the Leishmania (Viannia) braziliensis complex explored with chromosome-derived probes.
- Author
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Dujardin JC, Gajendran N, Arevalo J, Llanos-Cuentas A, Guerra H, Gomez J, Arroyo J, De Doncker S, Jacquet D, and Hamers R
- Subjects
- Animals, DNA Probes, Electrophoresis, Gel, Pulsed-Field, Karyotyping, Leishmania braziliensis classification, Leishmania mexicana genetics, Nucleic Acid Hybridization, Restriction Mapping, Leishmania braziliensis genetics, Polymorphism, Genetic
- Abstract
Molecular karyotype of 45 reference populations of Neotropical leishmanias was analyzed with ethidium bromide staining and with 6 chromosome-derived probes selected from a genomic library of Leishmania (Viannia) braziliensis. Size-conserved patterns were identified and found to be specific to subgenus Viannia and to its constitutive species. An important issue for epidemiology and clinical investigations was the discrimination between L. (V.) peruviana and L. (V.) braziliensis, 2 species found very similar by other genetic techniques, but responsible for totally different clinical patterns. The suggested existence of genetically distinct demes, or karyodemes, within the group-species might also show to be of importance, as these populations might differ in virulence, host-specificity and clinical manifestations.
- Published
- 1993
322. Chromosome rearrangement in Leishmania mexicana M379.
- Author
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Liu JH, Gajendran N, Muthui D, Muyldermans S, Dujardin JC, De Doncker S, Jacquet D, Le Ray D, Mathieu-Daudé F, and Hamers R
- Subjects
- Animals, Blotting, Southern, Cloning, Molecular, DNA, Circular genetics, DNA, Protozoan genetics, Restriction Mapping, Leishmania mexicana genetics, Recombination, Genetic
- Abstract
Circular extrachromosomal elements were observed in a variety of Leishmania species. We show here that two lines originating from the same isolate have been found to contain a circular DNA molecule of 26.6 kb and a linear chromosome of about 250 kb, respectively, which share a homology of more than 20 kb. The circular DNA molecule and its related region on the linear chromosome were cloned and their restriction maps compared. This investigation reveals information about chromosome rearrangement in L. mexicana M379. Further examination will enable us to understand the nature of chromosome rearrangement such as circularization or linearization.
- Published
- 1991
- Full Text
- View/download PDF
323. Nuclear disassembly of the Pb+Au system at Elab=29 MeV per nucleon.
- Author
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Piasecki E, Bresson S, Lott B, Bougault R, Colin J, Crema E, Galin J, Gatty B, Genoux-Lubain A, Guerreau D, Horn D, Jacquet D, Jahnke U, Jastrzebski J, Kordyasz A, Le Brun C, Lecolley JF, Louvel M, Morjean M, Paulot C, Pienkowski L, Pouthas J, Quednau B, Schröder WU, Schwinn E, Skulski W, and Töke J
- Published
- 1991
- Full Text
- View/download PDF
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