579 results on '"Shalbaf A"'
Search Results
252. Clinical response to electroconvulsive therapy among patients with treatment-refractory psychosis: the BC Psychosis Program experience
- Author
-
Ainsworth, N.J., primary, Leon, A., additional, Green, K., additional, White, R.F., additional, Sung, J., additional, Smith, G., additional, Shalbaf, R., additional, Singh, A., additional, Honer, W.G., additional, and Vila-Rodriguez, F., additional
- Published
- 2017
- Full Text
- View/download PDF
253. Characterizing Awake and Anesthetized States Using a Dimensionality Reduction Method
- Author
-
H. Jelveh Moghadam, Hamid Behnam, Reza Shalbaf, and M. Mirsadeghi
- Subjects
Adult ,Male ,Spectrum analyzer ,Computer science ,Medicine (miscellaneous) ,Health Informatics ,Unconsciousness ,Electroencephalography ,Machine learning ,computer.software_genre ,Signal ,03 medical and health sciences ,0302 clinical medicine ,Health Information Management ,030202 anesthesiology ,medicine ,Humans ,Anesthesia ,Wakefulness ,Reliability (statistics) ,Aged ,Cardiopulmonary Bypass ,medicine.diagnostic_test ,business.industry ,Dimensionality reduction ,Discriminant Analysis ,Reproducibility of Results ,Pattern recognition ,Signal Processing, Computer-Assisted ,Middle Aged ,Linear discriminant analysis ,Discriminant ,Female ,Artificial intelligence ,business ,computer ,Eeg monitoring ,030217 neurology & neurosurgery ,Algorithms ,Information Systems - Abstract
Distinguishing between awake and anesthetized states is one of the important problems in surgery. Vital signals contain valuable information that can be used in prediction of different levels of anesthesia. Some monitors based on electroencephalogram (EEG) such as the Bispectral (BIS) index have been proposed in recent years. This study proposes a new method for characterizing between awake and anesthetized states. We validated our method by obtaining data from 25 patients during the cardiac surgery that requires cardiopulmonary bypass. At first, some linear and non-linear features are extracted from EEG signals. Then a method called "LLE"(Locally Linear Embedding) is used to map high-dimensional features in a three-dimensional output space. Finally, low dimensional data are used as an input to a quadratic discriminant analyzer (QDA). The experimental results indicate that an overall accuracy of 88.4 % can be obtained using this method for classifying the EEG signal into conscious and unconscious states for all patients. Considering the reliability of this method, we can develop a new EEG monitoring system that could assist the anesthesiologists to estimate the depth of anesthesia accurately.
- Published
- 2015
254. Cerebellar Infarction in a 9 Year Old Child Presenting with Fever and Ataxia: A Case Report.
- Author
-
VAFAEE SHAHI, Mohammad, AZIZI SHALBAF, Nazanin, and TAHERNIA, Leila
- Subjects
CEREBRAL ischemia treatment ,INFARCTION ,CEREBELLUM diseases ,STROKE treatment ,AGE factors in disease ,ATAXIA ,DIAGNOSIS of brain abnormalities ,BRAIN stem ,CEREBRAL hemispheres ,HOSPITAL care of children ,CHILDREN'S hospitals ,COMPUTED tomography ,DIAGNOSIS ,DIAGNOSTIC errors ,FEVER ,HEADACHE ,HOSPITAL emergency services ,HYDROCEPHALUS ,INTENSIVE care units ,MAGNETIC resonance imaging ,MEDICAL errors ,NEUROSURGERY ,OCCUPATIONAL therapy ,PEDIATRICS ,VOMITING ,DISEASE relapse ,ACUTE diseases ,SYMPTOMS ,CHILDREN ,THERAPEUTICS - Abstract
Cerebellar acute ischemic stroke (CAIS) can be a complication of minor head trauma, vertebral artery dissection, vasospasm or systemic hypoperfusion. CT scan usually is negative few hours after acute infarction. Magnetic resonance imaging (MRI) is superior to CT scan for posterior fossa lesions and also in acute phase of cerebellar stroke especially in children. Here we report a 9-year-old girl referred to the Pediatric Emergency Room, Moosavi Hospital, Zanjan, Iran in January 2017 presenting with sudden onset of headache and recurrent vomiting, ataxia, and history of 3 consecutive days of fever and malaise. In the report of MRI, there were abnormal low T1 and high T2 signal intensity in left cerebellar hemisphere involving superior and middle cerebellar peduncles. After 4 days of admission, the patient became drowsy, symptoms progressed and transferred to the pediatric intensive care unit (PICU). The patient underwent hemispherectomy surgery of the left cerebellar hemisphere because of acute obstructive hydrocephaly. After 5 months of occupational therapy, the force of her extremities was normal and the ataxia completely disappeared. Childhood acute ischemic stroke although rare can happen with cerebellar involvement. Because in our patient the first brain CT scan was nearly normal and a false negative rate for initial computed tomography (CT) scanning of 60%-80% also contributes to missed and delayed diagnosis of childhood AIS, for every child presenting with acute ataxia without identified cause in addition to CT scan, MRI also being ordered and from the beginning besides other causes, stroke be contemplated as a cause of ataxia. [ABSTRACT FROM AUTHOR]
- Published
- 2019
255. Comparison of Glasgow-Blatchford score and full Rockall score systems to predict clinical outcomes in patients with upper gastrointestinal bleeding
- Author
-
Mokhtare,Marjan, Bozorgi,Vida, Agah,Shahram, Nikkhah,Mehdi, Faghihi,Amirhossein, Boghratian,Amirhossein, Shalbaf,Neda, Khanlari,Abbas, Seifmanesh,Hamidreza, Mokhtare,Marjan, Bozorgi,Vida, Agah,Shahram, Nikkhah,Mehdi, Faghihi,Amirhossein, Boghratian,Amirhossein, Shalbaf,Neda, Khanlari,Abbas, and Seifmanesh,Hamidreza
- Abstract
Marjan Mokhtare, Vida Bozorgi, Shahram Agah, Mehdi Nikkhah, Amirhossein Faghihi, Amirhossein Boghratian, Neda Shalbaf, Abbas Khanlari, Hamidreza Seifmanesh Colorectal Research Center, Rasoul Akram Hospital, Tehran, Iran Background: Various risk scoring systems have been recently developed to predict clinical outcomes in patients with upper gastrointestinal bleeding (UGIB). The two commonly used scoring systems include full Rockall score (RS) and the Glasgow-Blatchford score (GBS). Bleeding scores were assessed in terms of prediction of clinical outcomes in patients with UGIB. Patients and methods: Two hundred patients (age >18 years) with obvious symptoms of UGIB in the emergency department of Rasoul Akram Hospital were enrolled. Full RS and GBS were calculated. We followed the patients for records of rebleeding and 1-month mortality. A receiver operating characteristic curve by using areas under the curve (AUCs) was used to statistically identify the best cutoff point. Results: Eighteen patients were excluded from the study due to failure to follow-up. Rebleeding and mortality rate were 9.34% (n=17) and 11.53% (n=21), respectively. Regarding 1-month mortality, full RS was better than GBS (AUC, 0.648 versus 0.582; P=0.021). GBS was more accurate in terms of detecting transfusion need (AUC, 0.757 versus 0.528; P=0.001), rebleeding rate (AUC, 0.722 versus 0.520; P=0.002), intensive care unit admission rate (AUC, 0.648 versus 0.582; P=0.021), and endoscopic intervention rate (AUC, 0.771 versus 0.650; P<0.001). Conclusion: We found the full RS system is better for 1-month mortality prediction while GBS system is better for prediction of other outcomes. Keywords: full Rockall score, Glasgow-Blatchford score, gastrointestinal bleeding, mortality, prognosis
- Published
- 2016
256. Synthesis of Some of New Substituted 2-(Phenyl)-1,3-dimethyl- and -1,1,3,3-tetramethylguanidines
- Author
-
Akbar Mobinikhaledi, H. Shalbaf, N. Forughifar, and S. Mohtasabi
- Subjects
Phosphorus ,4-Bromoaniline ,Organic Chemistry ,Extraction (chemistry) ,chemistry.chemical_element ,Biochemistry ,Medicinal chemistry ,Toluene ,Inorganic Chemistry ,chemistry.chemical_compound ,Aniline ,chemistry ,Yield (chemistry) ,Proton NMR ,Organic chemistry ,Guanidine - Abstract
A series of new 2-(phenyl)-1,3- and 2-(phenyl)-1,3,3-tetramethylguanidines ( a-k ) were synthesized by reaction of different substituted aniline and urea derivatives in the presence of phosphorus oxychloride. The yields of products following extraction from toluene without further purification were of the order of 50-70%. We have found that adjusting of the pH at 8-9 in the work up process increases the yield of products. IR, 1 HNMR, and also mass spectrscopies were used for identification of these compounds.
- Published
- 2003
- Full Text
- View/download PDF
257. The acute effects of a combined yoga and transcranial direct current stimulation on neurophysiological markers: preliminary data
- Author
-
C. Pang, Ruiyang Ge, Marlon Danilewitz, Reza Shalbaf, Dorian Aur, J. Brown, Emily McLellan, and Fidel Vila-Rodriguez
- Subjects
Acute effects ,Transcranial direct-current stimulation ,General Neuroscience ,medicine.medical_treatment ,Biophysics ,medicine ,Neurology (clinical) ,Neurophysiology ,Psychology ,lcsh:Neurosciences. Biological psychiatry. Neuropsychiatry ,Neuroscience ,lcsh:RC321-571 - Published
- 2017
- Full Text
- View/download PDF
258. Depth of anesthesia indicator using combination of complexity and frequency measures
- Author
-
Hamid Behnam, A. H. Mehrnam, and Reza Shalbaf
- Subjects
Computational complexity theory ,medicine.diagnostic_test ,Computer science ,business.industry ,Pattern recognition ,Electroencephalography ,Deep anesthesia ,Anesthetic ,medicine ,Artificial intelligence ,Permutation entropy ,business ,Brain function ,Depth of anesthesia ,medicine.drug ,Biomedical engineering ,Sevoflurane anesthesia - Abstract
Depth of anesthesia estimation with the Electroencephalogram (EEG) is a main current challenge in anesthesia studies. This paper proposes an original method founded on combination of permutation entropy and frequency measure to calculate an index, called Brain function index (BFI), to quantify depth of anesthesia. As EEG derived features characterize different aspects of EEG signal, it would be logical to utilize multiple features to evaluate the effect of anesthetic. Such a method implemented in the Saadat brain function assessment module (Saadat Co., Tehran, Iran). The BFI and commercial RE index as employed in the Datex-Ohmeda monitor are applied to EEG signals gathered from 18 patients during sevoflurane anesthesia. The results show that both BFI and RE indices track the changes in EEG especially at deep anesthesia state. However, the BFI index makes better response about the point of loss of consciousness and it can be derived with significantly less computational complexity. Taking into account the high accuracy of this method, an innovative EEG processing device may be extended to help the anesthetists to estimate the depth of anesthesia precisely.
- Published
- 2014
- Full Text
- View/download PDF
259. Echocardiography without electrocardiogram using nonlinear dimensionality reduction methods
- Author
-
Hamid Behnam, Zahra Alizadeh-Sani, and Ahmad Shalbaf
- Subjects
medicine.medical_specialty ,Computer science ,Myocardial Ischemia ,Image processing ,Pattern Recognition, Automated ,Heart Rate ,Internal medicine ,medicine ,Image Processing, Computer-Assisted ,Humans ,Radiology, Nuclear Medicine and imaging ,Cardiac cycle ,business.industry ,Heart motion ,Frame (networking) ,Nonlinear dimensionality reduction ,Pattern recognition ,Heart ,General Medicine ,Manifold ,Nonlinear system ,Nonlinear Dynamics ,Echocardiography ,Cardiology ,Artificial intelligence ,business ,Isomap ,Algorithms - Abstract
The aim of this study is to evaluate the efficiency of a new automatic image processing technique, based on nonlinear dimensionality reduction (NLDR) to separate a cardiac cycle and also detect end-diastole (ED) (cardiac cycle start) and end-systole (ES) frames on an echocardiography system without using ECG. Isometric feature mapping (Isomap) and locally linear embeddings (LLE) are the most popular NLDR algorithms. First, Isomap algorithm is applied on recorded echocardiography images. By this approach, the nonlinear embedded information in sequential images is represented in a two-dimensional manifold and each image is characterized by a symbol on the constructed manifold. Cyclicity analysis of the resultant manifold, which is derived from the cyclic nature of the heart motion, is used to perform cardiac cycle length estimation. Then, LLE algorithm is applied on extracted left ventricle (LV) echocardiography images of one cardiac cycle. Finally, the relationship between consecutive symbols of the resultant manifold by the LLE algorithm, which is based on LV volume changes, is used to estimate ED (cycle start) and ES frames. The proposed algorithms are quantitatively compared to those obtained by a highly experienced echocardiographer from ECG as a reference in 20 healthy volunteers and 12 subjects with pathology. Mean difference in cardiac cycle length, ED, and ES frame estimation between our method and ECG detection by the experienced echocardiographer is approximately 7, 17, and 17 ms (0.4, 1, and 1 frame), respectively. The proposed image-based method, based on NLDR, can be used as a useful tool for estimation of cardiac cycle length, ED and ES frames in echocardiography systems, with good agreement to ECG assessment by an experienced echocardiographer in routine clinical evaluation.
- Published
- 2014
260. Monitoring depth of anesthesia using combination of EEG measure and hemodynamic variables
- Author
-
H. Jelveh Moghadam, Hamid Behnam, and Reza Shalbaf
- Subjects
Spectrum analyzer ,Artifact (error) ,Measure (data warehouse) ,medicine.diagnostic_test ,Computer science ,business.industry ,Cognitive Neuroscience ,Speech recognition ,Hemodynamics ,Pattern recognition ,Electroencephalography ,Signal ,Autonomic nervous system ,Burst suppression ,medicine ,Artificial intelligence ,business ,Research Article - Abstract
Monitoring depth of anesthesia (DOA) via vital signs is a major ongoing challenge for anesthetists. A number of electroencephalogram (EEG)-based monitors such as the Bispectral (BIS) index have been proposed. However, anesthesia is related to central and autonomic nervous system functions whereas the EEG signal originates only from the central nervous system. This paper proposes an automated DOA detection system which consists of three steps. Initially, we introduce multiscale modified permutation entropy index which is robust in the characterization of the burst suppression pattern and combine multiscale information. This index quantifies the amount of complexity in EEG data and is computationally efficient, conceptually simple and artifact resistant. Then, autonomic nervous system activity is quantified with heart rate and mean arterial pressure which are easily acquired using routine monitoring machine. Finally, the extracted features are used as input to a linear discriminate analyzer (LDA). The method is validated with data obtained from 25 patients during the cardiac surgery requiring cardiopulmonary bypass. The experimental results indicate that an overall accuracy of 89.4 % can be obtained using combination of EEG measure and hemodynamic variables, together with LDA to classify the vital sign into awake, light, surgical and deep anesthetised states. The results demonstrate that the proposed method can estimate DOA more effectively than the commercial BIS index with a stronger artifact-resistance.
- Published
- 2014
261. 3,6-BIS(TRIPHENYLPHOSPHONIUM)-CYCLOHEXENE PEROXODISULFATE: A HIGHLY EFFICIENT OXIDANT FOR THE SELECTIVE OXIDATION OF BENZYLIC ALCOHOLS
- Author
-
H. Shalbaf, M. A. Heidary, and Rashid Badri
- Subjects
chemistry.chemical_compound ,Chemistry ,organic chemicals ,Organic Chemistry ,Cyclohexene ,Medicinal chemistry - Abstract
The synthesis of 3,6-bis(triphenylphosphonium)cyclohexene peroxodisulfate and its application for the selective oxidation of benzylic alcohols is reported.
- Published
- 2001
- Full Text
- View/download PDF
262. A Real-Time Algorithm for Extraction of Heart Beat in Invasive Blood Pressure
- Author
-
R. Kahnamouei, Reza Shalbaf, and Ahmad Shalbaf
- Subjects
medicine.diagnostic_test ,Pulse (signal processing) ,Computer science ,business.industry ,Cardiac arrhythmia ,Interval (mathematics) ,Signal ,Beat detection ,Pulse oximetry ,Blood pressure ,Moving average ,medicine ,Computer vision ,Artificial intelligence ,business - Abstract
Beat detection algorithms have many clinical applications including pulse oximetry, cardiac arrhythmia detection, and cardiac output monitoring. Most of these algorithms have been developed by medical device companies and are proprietary. Thus, researchers who wish to investigate pulse contour analysis must rely on manual annotations or develop their own algorithms. Our algorithm involves three stages: filtering of the acquired signal, preliminary peak-to-peak interval detection and RP calculation, analysis of the original signal by means of producing two moving averages.
- Published
- 2008
- Full Text
- View/download PDF
263. Recognition of Six Digits from Lip Movement Using Color Image
- Author
-
R. Kahnamouei, M. Vafadoost, Ahmad Shalbaf, and Reza Shalbaf
- Subjects
Fuzzy clustering ,Computer science ,Color image ,business.industry ,Feature extraction ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,Pattern recognition ,Image (mathematics) ,ComputingMethodologies_PATTERNRECOGNITION ,Joint probability distribution ,Probability distribution ,Computer vision ,Noise (video) ,Artificial intelligence ,Hidden Markov model ,business ,ComputingMethodologies_COMPUTERGRAPHICS - Abstract
Visual information from lip shapes and movement help to improve the accuracy of a speech recognition system. This paper describes a novel approach for visual speech recognition that includes two stages: feature extraction from sequence of lip images and classifying them. This algorithm describes a region-based lip contour extraction algorithm based on deformable model for feature extraction. The algorithm employs a stochastic cost function to partition a color lip image into lip and non-lip regions such that the joint probability of the two regions is maximized. Given a discrete probability map generated by spatial fuzzy clustering, we show how the optimization of the cost function can be done in the continuous setting. The region-based approach makes the algorithm more tolerant to noise and artifacts in the image. The extracted parameters representing the lip shape are modeled as continuous probability distributions and Hidden Markov Models model their temporal dependencies. The system achieved an accuracy of 92% for a speaker independent recognition task of the six digits using lip shape information only.
- Published
- 2008
- Full Text
- View/download PDF
264. Epidemiological aspects and clinical outcome of patients with Rhinocerebral zygomycosis: a survey in a referral hospital in Iran
- Author
-
Bozorgi, Vida, primary, Talebitaher, Mahshid, additional, Shalbaf, Neda, additional, Radmanesh, Nima, additional, Nasri, Fatemeh, additional, and Ansari-Ramandi, Mohammad Mostafa, additional
- Published
- 2016
- Full Text
- View/download PDF
265. A Real-Time Algorithm for Extraction of Heart Beat in Invasive Blood Pressure
- Author
-
Shalbaf, R., primary, Kahnamouei, R., additional, and Shalbaf, A., additional
- Full Text
- View/download PDF
266. Recognition of Six Digits from Lip Movement Using Color Image
- Author
-
Shalbaf, Reza, primary, Vafadoost, M., additional, Shalbaf, A., additional, and Kahnamouei, R., additional
- Full Text
- View/download PDF
267. Automatic Computation of Left Ventricular Volume Changes Over a Cardiac Cycle from Echocardiography Images by Nonlinear Dimensionality Reduction
- Author
-
Alizadeh Sani, Zahra, primary, Shalbaf, Ahmad, additional, Behnam, Hamid, additional, and Shalbaf, Reza, additional
- Published
- 2014
- Full Text
- View/download PDF
268. The Brain function index as a depth of anesthesia indicator using complexity measures
- Author
-
Reza Shalbaf, M. Sadaghiani, H. Jelveh Moghadam, Hamid Behnam, and A. H. Mehrnam
- Subjects
Computational complexity theory ,medicine.diagnostic_test ,Brain activity and meditation ,business.industry ,Computer science ,Noise (signal processing) ,Pattern recognition ,Neurophysiology ,Electroencephalography ,Burst suppression ,Bispectral index ,Anesthetic ,medicine ,Artificial intelligence ,business ,Biomedical engineering ,medicine.drug - Abstract
Monitoring depth of anesthesia using the Electroencephalogram (EEG) is a major ongoing challenge in anesthesia research. This paper offers a real-time method based on combination of permutation entropy and burst suppression pattern ratio to calculate an index, called Brain function index (BFI), to quantify the effect of anesthetic drug on brain activity quickly and accurately. Such a method implemented in the Saadat brain function assessment module (Saadat Co., Tehran, Iran). The BFI and commercial Bispectral index (BIS) are applied to EEG signals collected from 25 patients during general surgery. The results show that both BFI and BIS track the gross changes in EEG especially at high doses of anesthetics. However, the BFI index has significant advantages as; it has an open source algorithm and doesn't involve a complex mixture of three unrelated sub-indices; it is less sensitive to the noise embedded in the EEG signal and it considerably reduces computational complexity.
- Published
- 2013
- Full Text
- View/download PDF
269. An image processing pipeline for segmenting the retinal layers from optical coherence tomography images
- Author
-
Jason Turuwhenua, Farzaneh Shalbaf, Ehsan Vaghefi, and Socrates Dokos
- Subjects
genetic structures ,medicine.diagnostic_test ,Computer science ,business.industry ,Pipeline (computing) ,Noise reduction ,ComputingMethodologies_IMAGEPROCESSINGANDCOMPUTERVISION ,Image processing ,Image segmentation ,Edge detection ,Optical coherence tomography ,medicine ,Computer vision ,Artificial intelligence ,Optical tomography ,business ,ComputingMethodologies_COMPUTERGRAPHICS ,Interpolation - Abstract
Optical Coherence Tomography (OCT) is the standard clinical modality for high resolution, three dimensional imaging of the multi-layered anatomy of the retina. This paper describes an image processing pipeline we developed for automated segmentation of the retinal strata within OCT image data-sets. The pipeline consists of three independent postprocessing modules that involve combinations of noise reduction i.e. 2D log-Gabor filtering, edge detection and interpolation. Our automated method was validated against manual measurements from three anonymized clinical OCT datasets. We found that our approach was able to accurately segment the layers of the retinal ultrastructure with mean differences of 1μm compared to manual measurements. Overall, we have developed a sophisticated automated application for segmenting the highly-structured retinal anatomy. Ultimately, this tool will be used to create detailed computer meshes of the retinal ultrastructure for our future modeling.
- Published
- 2013
- Full Text
- View/download PDF
270. Automatic assessment of regional and global wall motion abnormalities in echocardiography images by nonlinear dimensionality reduction
- Author
-
Ahmad, Shalbaf, Hamid, Behnam, Zahra, Alizade-Sani, and Maryam, Shojaifard
- Subjects
Male ,Automation ,Ventricular Dysfunction, Left ,Nonlinear Dynamics ,Echocardiography ,Movement ,Image Processing, Computer-Assisted ,Humans ,Female - Abstract
Identification and assessment of left ventricular (LV) global and regional wall motion (RWM) abnormalities are essential for clinical evaluation of various cardiovascular diseases. Currently, this evaluation is performed visually which is highly dependent on the training and experience of echocardiographers and thus is prone to considerable interobserver and intraobserver variability. This paper presents a new automatic method, based on nonlinear dimensionality reduction (NLDR) for global wall motion evaluation and also detection and classification of RWM abnormalities of LV wall in a three-point scale as follows: (1) normokinesia, (2) hypokinesia, and (3) akinesia.Isometric feature mapping (Isomap) is one of the most popular NLDR algorithms. In this paper, a modified version of Isomap algorithm, where image to image distance metric is computed using nonrigid registration, is applied on two-dimensional (2D) echocardiography images of one cycle of heart. By this approach, nonlinear information in these images is embedded in a 2D manifold and each image is characterized by a point on the constructed manifold. This new representation visualizes the relationship between these images based on LV volume changes. Then, a new global and regional quantitative index from the resultant manifold is proposed for global wall motion estimation and also classification of RWM of LV wall in a three-point scale. Obtained results by our method are quantitatively evaluated to those obtained visually by two experienced echocardiographers as the reference (gold standard) on 10 healthy volunteers and 14 patients.Linear regression analysis between the proposed global quantitative index and the global wall motion score index and also with LV ejection fraction obtained by reference experienced echocardiographers resulted in the correlation coefficients of 0.85 and 0.90, respectively. Comparison between the proposed automatic RWM scoring and the reference visual scoring resulted in an absolute agreement of 82% and a relative agreement of 97%.The proposed diagnostic method can be used as a useful tool as well as a reference visual assessment by experienced echocardiographers for global wall motion estimation and also classification of RWM abnormalities of LV wall in a three-point scale in clinical evaluations.
- Published
- 2013
271. Nanohybrid Platform of Functionalized Graphene Oxide for Chemo-Photothermal Therapy.
- Author
-
Hashemi, Mohadeseh, Omidi, Meisam, Mohammadi, Javad, Shalbaf, Mohammad, Shayeh, Javad Shabani, and Mohagheghi, Mohammad Ali
- Subjects
GRAPHENE oxide ,PHOTOTHERMAL effect ,DRUG delivery systems ,LYSINE ,DOXORUBICIN ,CANCER cells - Abstract
Background: Despite the enormous effort has been done for cancer therapy, fabricating targeted drug delivery platform which can effectively eliminate cancer is a challenge. Methods: In this study, we have developed a novel platform composed of graphene oxide (GO), poly-l-lysine (PLL), Herceptin (Her) and doxorubicin (DOX) for chemo-photothermal therapy. GO has been prepared using the hummers method. The morphology of the prepared carriers has studied using transmission electron microscopy (TEM) and scanning electron microscopy (SEM). The successful conjugation of PLL and Her to the surface of GO has been examined using Fourier-transform infrared spectroscopy (FTIR). DOX loading on GO sheets was characterized using UV-Vis absorption spectra. MTT and live/dead assay have been administrated to study the synergistic chemo-photothermal therapy potential of the carries. Results: FTIR shows the successful conjugation of the PLL and Herceptin to the GO surface. TGA analysis suggests that, in comparison to GO, GO-PLL has higher thermal stability. In addition, DOX loading efficiency is around 78.5 ± 4.3 %. Also, Live /dead and MTT assays reveal that the introduced carrier can effectively kill cancerous cells via chemo-photothermal effects. Conclusion: Our results have suggested that the novel carrier is a versatile platform for chemo-photothermal therapy application. [ABSTRACT FROM AUTHOR]
- Published
- 2018
272. Trachyspermum copticum essential oil incorporated niosome for cancer treatment
- Author
-
Trinh, Le Huy, Takzare, Alireza, Ghafoor, Dlzar D., Siddiqi, Ahmed Faisal, Ravali, Sahithya, Shalbaf, Mohammad, and Bakhtiar, Mahdiyeh
- Abstract
The Trachyspermum copticum essential oil (TCEO) has been incorporated into niosomes (NIO-TCEO). The chemical composition of the TCEO has been evaluated using Gas chromatography mass spectrometry (GC-MS) and the antioxidant activity of the TCEO has been characterized by radical scavenging capacity (RSC). The niosomes have been characterized with respect to their size, zeta potential, morphology, encapsulation efficiency, in vitro release, and cell toxicity against hepatocellular carcinoma cell line (HepG2). The interaction of the TCEO with niosomes has been studied using Fourier transform infrared spectroscopy (FTIR) and differential scanning calorimetry (DSC). Our study has shown an excellent antioxidant activity of the essential oil with IC50 of 18.32 ± 3.6 μg/ml. The size of the niosomes has been around 151.06 ± 5.3 nm and the TCEO entrapment efficiency has been 87.41 ± 5.97%. Our results have demonstrated that niosomes loaded with TCEO have a potential application for cancer therapy.
- Published
- 2019
- Full Text
- View/download PDF
273. Prediction of treatment outcome for repetitive transcranial magnetic stimulation in major depressive disorder using connectivity measures and ensemble of pre-trained deep learning models.
- Author
-
Sadat Shahabi, Mohsen, Nobakhsh, Behrooz, Shalbaf, Ahmad, Rostami, Reza, and Kazemi, Reza
- Subjects
TRANSCRANIAL magnetic stimulation ,MENTAL depression ,TREATMENT effectiveness ,DEEP learning ,CONVOLUTIONAL neural networks ,PLURALITY voting - Abstract
• New methodology for prediction of the rTMS treatment of MDD to improve treatment efficacy and reduce health care costs. • Effective connectivity used for transforming EEG signals to image and provides an informative feature map. • An ensemble of Transfer Learning models was developed using the weighted majority voting to predict the treatment outcome. Repetitive Transcranial Magnetic Stimulation (rTMS) can be used as an effective treatment for Major Depressive Disorder (MDD) especially when a patient does not respond to multiple antidepressants. However, the prediction of the treatment outcome of rTMS is a vital task to prevent starting an inefficient treatment which may waste several important weeks for the patient and clinic. In the present study, we acquired 19-channel Electro-Encephalogram (EEG) for 34 MDD patients diagnosed with drug-resistant Depression before initiating rTMS treatment. Effective Connectivity matrix was obtained from four frequency bands of EEG signal to create connectivity images which, simultaneously, represent spatial and frequency information of EEG signals. Then, we investigated five powerful pre-trained Convolutional Neural Networks (CNN) named VGG16, Xception, InceptionResNetV2, DenseNet121, and EfficientNetB0 as Transfer Learning (TL) models to predict rTMS treatment outcome by discriminating Responders and NonResponders. VGG16 and DenseNet121 achieved the best performance with an accuracy of 89.22%. Additionally, we developed a new ensemble model based on all pre-trained CNN models using a weighted majority voting approach. The Differential Evolution Optimization (DEO) algorithm is used to find the optimal weights for the ensemble model and the mean accuracy of 92.28% was obtained. The superior performance of the optimized ensemble of these pre-trained CNN models, using effective connectivity images obtained from EEG signals, shows that the proposed method is highly capable of predicting the treatment outcome of rTMS. [ABSTRACT FROM AUTHOR]
- Published
- 2023
- Full Text
- View/download PDF
274. Exergy, Economic, and Environmental Analysis of a PEM Fuel Cell Power System to Meet Electrical and Thermal Energy Needs of Residential Buildings
- Author
-
Ebrahim Hajidavalloo, Farideh Atabi, Mehdi Ali Ehyaei, S. Shalbaf, G. R. Ashari, and A. A. Mozafari
- Subjects
Exergy ,Engineering ,Waste management ,Renewable Energy, Sustainability and the Environment ,business.industry ,Mechanical Engineering ,Environmental engineering ,Energy Engineering and Power Technology ,Proton exchange membrane fuel cell ,Electronic, Optical and Magnetic Materials ,Steam reforming ,Electric power system ,Mechanics of Materials ,Hydrogen fuel ,Heat exchanger ,Combustor ,business ,Thermal energy - Abstract
In this paper, a Polymer Electrolyte Membrane (PEM) fuel cell power system including burner, steam reformer, heat exchanger, and water heater has been considered. A PEM fuel cell system is designed to meet the electrical, domestic hot water, heating, and cooling loads of a residential building located in Tehran. Operating conditions of the system with consideration of the electricity cost has been studied. The cost includes social cost of the environmental pollutants (e.g. CO2, CO and NO). The results show that the maximum energy needs of the building can be met by 12 fuel cell stacks with nominal capacity of 8.5 kW. Annual average electricity cost of thissystem is equal to 0.39 US$/kWh and entropy generation of this system through a year is equal to 1004.54 GJ/K1. It is also concluded that increase in ambient temperature from 1 °C to 40 °C increases the entropy generation by 5.73%, carbon monoxide by 14.56%, and nitrogen monoxide by 8.9%, but decreases carbon dioxide by 0.47%.
- Published
- 2012
- Full Text
- View/download PDF
275. Measuring the effects of sevoflurane on electroencephalogram using sample entropy
- Author
-
R, Shalbaf, H, Behnam, J, Sleigh, and L, Voss
- Subjects
Adult ,Male ,Methyl Ethers ,Adolescent ,Dose-Response Relationship, Drug ,Entropy ,Electroencephalography ,Middle Aged ,Signal-To-Noise Ratio ,Sevoflurane ,Young Adult ,Monitoring, Intraoperative ,Anesthetics, Inhalation ,Humans ,Female ,Anesthesia, Inhalation ,Algorithms - Abstract
Monitoring the effect of anesthetic drugs on the neural system is a major ongoing challenge for anesthetists. During the past few years, several electroencephalogram (EEG)-based methods such as the response entropy (RE) as implemented in the Datex-Ohmeda M-Entropy Module have been proposed. In this paper, sample entropy is used to quantify the predictability of EEG series, which could provide an index to show the effect of sevoflurane anesthesia. The dose-response relation of sample entropy is compared with that of RE.EEG data from 21 subjects is collected during the induction of general anesthesia with sevoflurane. The sample entropy is applied to the EEG recording. Pharmacokinetic-pharmacodynamic modeling and prediction probability statistic are used to evaluate the efficiency of sample entropy in comparison with RE.Both methods track the gross changes in EEG, especially the occurrence of burst-suppression pattern at high doses of anesthetics. However, our method produces faster reaction to transients in EEG during the induction of anesthesia as indicated from the pharmacokinetic and pharmacodynamic modeled parameters and analysis around the point of loss of consciousness. Also, sample entropy correlated more closely with effect-site sevoflurane concentration than the RE. In addition, our proposed method exhibits greater resistance to noise in the EEG signals.The results demonstrate that sample entropy can estimate the sevoflurane drug effect on the EEG more effectively than the commercial RE index with a stronger noise resistance.
- Published
- 2012
276. Automatic Computation of Left Ventricular Volume Changes Over a Cardiac Cycle from Echocardiography Images by Nonlinear Dimensionality Reduction.
- Author
-
Alizadeh Sani, Zahra, Shalbaf, Ahmad, Behnam, Hamid, and Shalbaf, Reza
- Subjects
ECHOCARDIOGRAPHY ,ALGORITHMS ,AUTOMATION ,DIAGNOSTIC imaging ,LEFT heart ventricle ,LONGITUDINAL method ,COMPUTERS in medicine ,DICOM (Computer network protocol) - Abstract
Curve of left ventricular (LV) volume changes throughout the cardiac cycle is a fundamental parameter for clinical evaluation of various cardiovascular diseases. Currently, this evaluation is often performed manually which is tedious and time consuming and suffers from significant interobserver and intraobserver variability. This paper introduces a new automatic method, based on nonlinear dimensionality reduction (NLDR) for extracting the curve of the LV volume changes over a cardiac cycle from two-dimensional (2-D) echocardiography images. Isometric feature mapping (Isomap) is one of the most popular NLDR algorithms. In this study, a modified version of Isomap algorithm, where image to image distance metric is computed using nonrigid registration, is applied on 2-D echocardiography images of one cycle of heart. Using this approach, the nonlinear information of these images is embedded in a 2-D manifold and each image is characterized by a symbol on the constructed manifold. This new representation visualizes the relationship between these images based on LV volume changes and allows extracting the curve of the LV volume changes automatically. Our method in comparison to the traditional segmentation algorithms does not need any LV myocardial segmentation and tracking, particularly difficult in the echocardiography images. Moreover, a large data set under various diseases for training is not required. The results obtained by our method are quantitatively evaluated to those obtained manually by the highly experienced echocardiographer on ten healthy volunteers and six patients which depict the usefulness of the presented method. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
277. Noise reduction in echocardigraphy images using Contourlet transform
- Author
-
Hamid Behnam, Laleh Panjeh Shahi, Ahmad Shalbaf, and Zahra Alizadeh Sani
- Subjects
Mean squared error ,business.industry ,Noise reduction ,Wiener filter ,Speckle noise ,Peak signal-to-noise ratio ,Contourlet ,symbols.namesake ,Speckle pattern ,Noise ,symbols ,Computer vision ,Artificial intelligence ,business ,Mathematics - Abstract
Echocardiographic images have considerable noises (Especially speckle noise) because of their inherent nature and do not have desirable quality which makes difficult to analyze them. Therefore, it is essential to run pre-processing to reduce noises before their interpretation and analysis. In this paper, we have used Contourlet method to reduce the noise of echocardiographic images. In order to evaluate and compare the proposed method with some common de noising methods, three different criteria (mean square error (MSE), peak signal-to-noise ratio and signal to mean square error) are used. The results showed that the proposed method is much better than the other methods. Moreover, according to expert echo cardiologist opinion, we have achieved maximum resolution other common de noising methods.
- Published
- 2011
- Full Text
- View/download PDF
278. Noise reduction of echocardiography images using Isomap algorithm
- Author
-
Parisa Gifani, Ahmad Shalbaf, Zahra Alizadeh Sani, and Hamid Behnam
- Subjects
Heartbeat ,business.industry ,Noise reduction ,Nonlinear dimensionality reduction ,Speckle noise ,Pattern recognition ,Iterative reconstruction ,Manifold ,Point (geometry) ,Computer vision ,Noise (video) ,Artificial intelligence ,business ,Mathematics - Abstract
Medical applications of ultrasound imaging have expanded enormously over the last two decades. De-noising is challenging issues for better medical interpretation and diagnosis on high volume of data sets in echocardiography. In this paper, manifold learning algorithm is applied on 2-D echocardiography images to discover the relationship between the frames of consecutive cycles of the heart motion. By this approach, each image is depicted by a point on reconstructed two-dimensional manifold by Isomap algorithm and similar points related to similar images according to the property of periodic heartbeat cycle stand together. Noise reduction is achieved by averaging similar images on reconstructed manifold. By comparing the proposed method with some common methods and according to qualitative expert's opinions, the proposed method has maximum noise reduction, minimum blurring and better contrast among the similar methods.
- Published
- 2011
- Full Text
- View/download PDF
279. Automatic detection of end systole and end diastole within a sequence of 2-D echocardiographic images using modified Isomap algorithm
- Author
-
Parisa Gifani, Ahmad Shalbaf, Hamid Behnam, and Zahra Alizadeh-Sani
- Subjects
Pixel ,business.industry ,Computer vision ,Point (geometry) ,Iterative reconstruction ,Artificial intelligence ,Stroke volume ,Isomap ,business ,Manifold ,Mathematics ,Visualization ,Volume (compression) - Abstract
The first step for automatic calculation of the ejection fraction, stroke volume and some other features related to heart motion abnormalities in echocardiographic images is automatic detection of the end-systole and end-diastole frames. In this paper, modified Isomap algorithm is applied on two dimensional (2-D) echocardiographic images to reveal the relationship between the frames of one cycle of heart motion. By this approach, the image sequences are represented in a 2-D manifold and each image is characterized by a point on reconstructed manifold. By considering the fact that end-diastolic and the end-systolic frames have the highest volume difference and consequently highest image difference comparing to the other two frames, the maximum distance between the two points in manifold is used to find these frames. The results obtained with our method were validated to those obtained with the reference experienced echo-cardiologist on six healthy volunteers and depicted the usefulness of presented method.
- Published
- 2011
- Full Text
- View/download PDF
280. Selection and Exergy Analysis of Fuel Cell System to Meet all Energy Needs of Residential Buildings
- Author
-
G.R. Ashari, N.Hedayat, S. Shalbaf, and E.Hajidavalloo
- Subjects
exergy ,no of fuel cell stacks ,CHP mode ,entropy - Abstract
In this paper a polymer electrolyte membrane (PEM) fuel cell power system including burner, steam reformer, heat exchanger and water heater has been considered to meet the electrical, heating, cooling and domestic hot water loads of residential building which in Tehran. The system uses natural gas as fuel and works in CHP mode. Design and operating conditions of a PEM fuel cell system is considered in this study. The energy requirements of residential building and the number of fuel cell stacks to meet them have been estimated. The method involved exergy analysis and entropy generation thorough the months of the year. Results show that all the energy needs of the building can be met with 12 fuel cell stacks at a nominal capacity of 8.5 kW. Exergy analysis of the CHP system shows that the increase in the ambient air temperature from 1oC to 40oC, will have an increase of entropy generation by 5.73%.Maximum entropy generates for 15 hour in 15th of June and 15th of July is estimated to amount at 12624 (kW/K). Entropy generation of this system through a year is estimated to amount to 1004.54 GJ/k.year., {"references":["M.A. Rosen, N.M. Lee, and I. Dincer, \"Efficiency analysis of a\ncogeneration and district energy system\", Applied Thermal\nEngineering, vol. 25, pp. 147-159, 2005.","J.L. Silveira, A.C.S. Walter, C.A. Luengo, \"A case study of compact\ncogeneration using various fuels\", Fuel, vol. 76, pp. 447-451, 1997.","M.A. Ehyaei, M.N. Bahadori, \"Selection of micro turbines to meet\nelectrical and thermal energy needs of residential buildings in Iran\",\nEnergy & Buildings, vol. 39, pp. 1227-1234, 2006.","M.A. Ehyaei, A. Mozafari, \"Energy, economic and environmental (3E)\nanalysis of a micro gas turbine employed for on-site combined heat and\npower production\", Energy and Buildings, vol.42, pp. 259-264, 2010.","M.H. Saidi, M.A. Ehyaei, A. Abbasi, \"Optimization of a combined heat\nand power PEFC by exergy analysis\", Journal of Power Sources, vol.\n143, pp. 179-184, 2005.","M.H. Saidi, M.A. Ehyaei, A. Abbasi, \"Exergetic optimization of a PEM\nfuel cell for domestic hot water heater\", ASME journal of fuel cell\ntechnology 2, pp. 284-289, 2005.","C.J. Renedo, A. Ortiz, M. Monana, D. Silio, S. Perez, \"Study of\ndifferent cogeneration alternatives for Spanish hospital center\", Energy\nand Buildings, vol. 38, pp. 484-490, 2006.","K.H. Khan, M.G. Rasul, M.M.K. Khan \"Energy conservation in\nbuildings: cogeneration and cogeneration coupled with thermal energy\nstorage\", Applied Energy, vol. 7, pp. 15-34, 2004.","M. Dentice, D. Accadia, M. Sasso, \"Micro-combined heat and power in\nresidential and light commericial applications\" Applied Thermal\nEngineering, vol. 23, pp. 1247-1259, 2003.\n[10] J.L. Miguez, S. Murillo, J. Porteiro J, \"Feasibility of a new domestic\nCHP tri generation with heat pump: I. Design development\", Applied\nThermal Engineering, vol. 24, pp. 1409-1419, 2004.\n[11] J.L. Miguez, S. Murillo, J. Porteiro J, \"Feasibility of a new domestic\nCHP tri generation with heat pump: II. Availability analysis\", Applied\nThermal Engineering, vol.24, pp. 1421-1429, 2004.\n[12] G. Gigliucci , L. Petruzzi , E. Cerelli, \"Demonstration of a residential\nCHP system based on PEM fuel cells\", Journal of Power Sources, vol.\n131, pp. 62-68, 2004.\n[13] X.Q. Kong, R.Z. Wang, X.H. Huang, \"Energy efficiency and economic\nfeasibility of CCHP driven by sterling engine\", Energy Conversion and\nManagement, vol.45, pp. 1433-1442, 2004.\n[14] K.M. Maribu, R. Firestone , C. Marnay, A.S. Siddiqui, \"Distributed\nenergy resources market diffusion model\", Energy Policy, vol. 35, pp.\n4471-4484, 2007.\n[15] G.G. Maidment, R.M. Tozer, \"Combined cooling heat and power in\nsupermarkets\", Applied Thermal Engineering, vol. 22, pp. 653-665,\n2002.\n[16] D. Ziher, A. Poredos, \"Economics of a three-generation system in a\nhospital\", Applied Thermal Engineering, vol. 26, pp. 680-687, 2006.\n[17] E. Cardona, P.Sannino, A.Piacentino, F.Cardona, \"Energy saving in\nairports by three-generation. Part II: Short and long term planning for\nthe Malpensa 2000 CHCP plant\", Applied Thermal Engineering, vol.\n26, pp. 1437-1447, 2006.\n[18] A. Bejan, Advanced Engineering Thermodynamics. New York: John\nWiley & Sons, 1988.\n[19] A. Mozafari, and A. Ahmadi and M.A. Ehyaei, \"Optimization of micro\ngas turbine by exergy, economic and environmental (3E) analysis\", IJ\nExergy, vol. 7, pp. 1-19, 2010."]}
- Published
- 2011
- Full Text
- View/download PDF
281. Characterizing Awake and Anesthetized States Using a Dimensionality Reduction Method
- Author
-
Mirsadeghi, M., primary, Behnam, H., additional, Shalbaf, R., additional, and Jelveh Moghadam, H., additional
- Published
- 2015
- Full Text
- View/download PDF
282. ORDER PATTERNS RECURRENCE ANALYSIS OF ELECTROENCEPHALOGRAM DURING SEVOFLURANE ANESTHESIA
- Author
-
Shalbaf, Reza, primary, Behnam, Hamid, additional, and Sleigh, Jamie, additional
- Published
- 2015
- Full Text
- View/download PDF
283. Automatic detection of end-diastole and end-systole from echocardiography images using manifold learning
- Author
-
Parisa Gifani, Ahmad Shalbaf, Zahra Alizadeh Sani, and Hamid Behnam
- Subjects
Physiology ,Systole ,Biomedical Engineering ,Biophysics ,Image processing ,law.invention ,Automation ,law ,Artificial Intelligence ,Diastole ,Physiology (medical) ,Image Processing, Computer-Assisted ,Humans ,Point (geometry) ,Computer vision ,Isovolumetric contraction ,Mathematics ,Ejection fraction ,Cardiac cycle ,business.industry ,Nonlinear dimensionality reduction ,Heart ,Stroke volume ,body regions ,Echocardiography ,Artificial intelligence ,business ,Manifold (fluid mechanics) ,Algorithms - Abstract
The automatic detection of end-diastole and end-systole frames of echocardiography images is the first step for calculation of the ejection fraction, stroke volume and some other features related to heart motion abnormalities. In this paper, the manifold learning algorithm is applied on 2D echocardiography images to find out the relationship between the frames of one cycle of heart motion. By this approach the nonlinear embedded information in sequential images is represented in a two-dimensional manifold by the LLE algorithm and each image is depicted by a point on reconstructed manifold. There are three dense regions on the manifold which correspond to the three phases of cardiac cycle ('isovolumetric contraction', 'isovolumetric relaxation', 'reduced filling'), wherein there is no prominent change in ventricular volume. By the fact that the end-systolic and end-diastolic frames are in isovolumic phases of the cardiac cycle, the dense regions can be used to find these frames. By calculating the distance between consecutive points in the manifold, the isovolumic frames are mapped on the three minimums of the distance diagrams which were used to select the corresponding images. The minimum correlation between these images leads to detection of end-systole and end-diastole frames. The results on six healthy volunteers have been validated by an experienced echo cardiologist and depict the usefulness of the presented method.
- Published
- 2010
284. ChemInform Abstract: 3,6-Bis(triphenylphosphonium)cyclohexene Peroxodisulfate: A Highly Efficient Oxidant for the Selective Oxidation of Benzylic Alcohols
- Author
-
Rashid Badri, H. Shalbaf, and M. A. Heidary
- Subjects
chemistry.chemical_compound ,Chemistry ,organic chemicals ,Cyclohexene ,General Medicine ,Medicinal chemistry - Abstract
The synthesis of 3,6-bis(triphenylphosphonium)cyclohexene peroxodisulfate and its application for the selective oxidation of benzylic alcohols is reported.
- Published
- 2010
- Full Text
- View/download PDF
285. Frontal-Temporal Synchronization of EEG Signals Quantified by Order Patterns Cross Recurrence Analysis During Propofol Anesthesia
- Author
-
Shalbaf, Reza, primary, Behnam, Hamid, additional, Sleigh, Jamie W., additional, Steyn-Ross, D. Alistair, additional, and Steyn-Ross, Moira L., additional
- Published
- 2015
- Full Text
- View/download PDF
286. ChemInform Abstract: Nucleophilic Ring Opening of Epoxides Promoted by Multi-Site Phase-Transfer Catalyst: An Efficient and Eco-Friendly Route to Synthesis of β-Hydroxy-thiocyanate
- Author
-
Ali Reza Kiasat, Tahereh Tabatabaei, Roya Mirzajani, and Haji Shalbaf
- Subjects
chemistry.chemical_compound ,Nucleophile ,Thiocyanate ,Chemistry ,Multi site ,General Medicine ,Ring (chemistry) ,Phase-transfer catalyst ,Combinatorial chemistry ,Environmentally friendly - Published
- 2009
- Full Text
- View/download PDF
287. Enhanced DNA binding capacity on up-regulated epidermal wild-type p53 in vitiligo by H2O2-mediated oxidation: a possible repair mechanism for DNA damage
- Author
-
Bhaven Chavan, Nicholas C.J. Gibbons, J. M. Thornton, Mohamed M. Salem, Karin U. Schallreuter, and Mohammad Shalbaf
- Subjects
Adult ,DNA Repair ,DNA repair ,DNA damage ,Vitiligo ,Apoptosis ,Cell Cycle Proteins ,Electrophoretic Mobility Shift Assay ,Ataxia Telangiectasia Mutated Proteins ,Protein Serine-Threonine Kinases ,medicine.disease_cause ,Biochemistry ,chemistry.chemical_compound ,Peroxynitrous Acid ,Genetics ,medicine ,Humans ,p300-CBP Transcription Factors ,Molecular Biology ,integumentary system ,biology ,Guanosine ,Caspase 3 ,Nitrotyrosine ,Tumor Suppressor Proteins ,Cytochromes c ,Proto-Oncogene Proteins c-mdm2 ,DNA ,Hydrogen Peroxide ,Middle Aged ,medicine.disease ,Molecular biology ,Proliferating cell nuclear antigen ,Up-Regulation ,DNA-Binding Proteins ,Oxidative Stress ,chemistry ,Proto-Oncogene Proteins c-bcl-2 ,biology.protein ,DNA mismatch repair ,Epidermis ,Tumor Suppressor Protein p53 ,Oxidation-Reduction ,Oxidative stress ,Biotechnology ,Nucleotide excision repair ,DNA Damage - Abstract
Vitiligo is characterized by a patchy loss of inherited skin color affecting approximately 0.5% of individuals of all races. Despite the absence of the protecting pigment and the overwhelming evidence for hydrogen peroxide (H(2)O(2))-induced oxidative stress in the entire epidermis of these patients, there is neither increased photodamage/skin aging nor a higher incidence for sun-induced nonmelanoma skin cancer. Here we demonstrate for the first time increased DNA damage via 8-oxoguanine in the skin and plasma in association with epidermal up-regulated phosphorylated/acetylated p53 and high levels of the p53 antagonist p76(MDM2). Short-patch base-excision repair via hOgg1, APE1, and polymerasebeta DNA repair is up-regulated. Overexpression of Bcl-2 and low caspase 3 and cytochrome c levels argue against increased apoptosis in this disease. Moreover, we show the presence of high epidermal peroxynitrite (ONOO(-)) levels via nitrotyrosine together with high nitrated p53 levels. We demonstrate by EMSA that nitration of p53 by ONOO(-) (300 x 10(-6) M) abrogates DNA binding, while H(2)O(2)-oxidized p53 (10(-3) M) enhances DNA binding capacity and prevents ONOO(-)-induced abrogation of DNA binding. Taken together, we add a novel reactive oxygen species to the list of oxidative stress inducers in vitiligo. Moreover, we propose up-regulated wild-type p53 together with p76(MDM2) as major players in the control of DNA damage/repair and prevention of photodamage and nonmelanoma skin cancer in vitiligo.
- Published
- 2009
288. Epilepsy detection using Detrended Fluctuation Analysis
- Author
-
Pegah Tayaranian Hosseini, Reza Shalbaf, and Morteza Analoui
- Subjects
medicine.diagnostic_test ,Computer science ,business.industry ,Speech recognition ,Pattern recognition ,Electroencephalography ,Linear discriminant analysis ,medicine.disease ,Epilepsy ,Feature (computer vision) ,medicine ,Detrended fluctuation analysis ,Proper treatment ,Detection theory ,Ictal ,Artificial intelligence ,business - Abstract
Epilepsy is a disorder of the central nervous system characterized by the loss of consciousness and convulsions. If some early warning signal of an upcoming seizure (diagnosis of preictal period) could be detected, proper treatment could be applied to the patient to help prevent the seizure. In this articles, Detrended Fluctuation Analysis (DFA) has been introduced and used to extract the DFA feature from EEG signal. DFA is a scaling analysis method that provides a simple quantitative parameter to represent the correlation properties of a signal, we come to 100% separation of Normal, Preictal, and Ictal states of the brain.
- Published
- 2009
- Full Text
- View/download PDF
289. Cholesterol regulates melanogenesis in human epidermal melanocytes and melanoma cells
- Author
-
Bhaven Chavan, Hartmut Rokos, Jennifer D. Spencer, Mohamed Shalbaf, John M. Wood, Sybille Hasse, and Karin U. Schallreuter
- Subjects
medicine.medical_specialty ,Time Factors ,Tyrosinase ,Dermatology ,Biology ,Melanocyte ,Biochemistry ,Models, Biological ,Melanin ,chemistry.chemical_compound ,Internal medicine ,Cell Line, Tumor ,medicine ,Cyclic AMP ,Humans ,Vitamin D ,Molecular Biology ,Melanoma ,integumentary system ,Cholesterol ,Pigmentation ,medicine.disease ,Microphthalmia-associated transcription factor ,Cell biology ,medicine.anatomical_structure ,Endocrinology ,chemistry ,Epidermal Cells ,Receptors, Estrogen ,Receptors, LDL ,HMG-CoA reductase ,LDL receptor ,Apolipoprotein B-100 ,biology.protein ,Melanocytes ,lipids (amino acids, peptides, and proteins) - Abstract
Cholesterol is important for membrane stability and is the key substrate for the synthesis of steroid hormones and vitamin D. Furthermore, it is a major component of the lipid barrier in the stratum corneum of the human epidermis. Considering that steroid hormone synthesis is taking place in epidermal melanocytes, we tested whether downstream oestrogen receptor/cAMP signalling via MITF/tyrosine hydroxylase/tyrosinase/pigmentation could be possibly modulated by cholesterol. For this purpose, we utilized human primary melanocyte cell cultures and human melanoma cells with different pigmentation capacity applying immunofluorescence, RT-PCR, Western blotting and determination of melanin content. Our in situ and in vitro results demonstrated that melanocytes can synthesize cholesterol via HMG-CoA reductase and transport cholesterol via LDL/Apo-B100/LDLR. Moreover, we show that cholesterol increases melanogenesis in these cells and in human melanoma cells of intermediate pigmentation (FM55) in a time- and dose-dependent manner. Cellular cholesterol levels in melanoma cells with different pigmentation patterns, epidermal melanocytes and keratinocytes do not differ except in the amelanotic (FM3) melanoma cell line. This result is in agreement with decreasing cholesterol content versus increasing pigmentation in melanosomes. Cholesterol induces cAMP in a biphasic manner i.e. after 30 min and later after 6 and 24 h, meanwhile protein expression of oestrogen receptor beta, CREB, MITF, tyrosine hydroxylase and tyrosinase is induced after 72 h. Taken together, we show that human epidermal melanocytes have the capacity of cholesterol signalling via LDL/Apo-B100/LDL receptor and that cholesterol under in vitro conditions increases melanogenesis.
- Published
- 2009
290. Presence of epidermal allantoin further supports oxidative stress in vitiligo
- Author
-
John M. Wood, Karin U. Schallreuter, Derek J. Maitland, Mohammad Shalbaf, Lee K. Marles, Hartmut Rokos, Souna M. Elwary, and Nicholas C.J. Gibbons
- Subjects
Keratinocytes ,Xanthine Oxidase ,Xanthine Dehydrogenase ,Blotting, Western ,Vitiligo ,Dermatology ,Biology ,medicine.disease_cause ,Biochemistry ,Hydroxylation ,chemistry.chemical_compound ,Allantoin ,Catalytic Domain ,medicine ,Humans ,Computer Simulation ,RNA, Messenger ,Xanthine oxidase ,Molecular Biology ,Hypoxanthine ,Cells, Cultured ,integumentary system ,Molecular Structure ,Hydrogen Peroxide ,Xanthine ,Immunohistochemistry ,Uric Acid ,Oxidative Stress ,chemistry ,Xanthine dehydrogenase ,Models, Chemical ,Case-Control Studies ,Flavin-Adenine Dinucleotide ,Uric acid ,Melanocytes ,Epidermis ,Oxidation-Reduction ,Oxidative stress - Abstract
Xanthine dehydrogenase/xanthine oxidase (XDH/XO) catalyses the hydroxylation of hypoxanthine to xanthine and finally to uric acid in purine degradation. These reactions generate H(2)O(2) yielding allantoin from uric acid when reactive oxygen species accumulates. The presence of XO in the human epidermis has not been shown so far. As patients with vitiligo accumulate H(2)O(2) up to mm levels in their epidermis, it was tempting to examine whether this enzyme and consequently allantoin contribute to the oxidative stress theory in this disease. To address this question, reverse transcription-polymerase chain reaction, immunoreactivity, western blot, enzyme kinetics, computer modelling and high performance liquid chromatography/mass spectrometry analysis were carried out. Our results identified the presence of XDH/XO in epidermal keratinocytes and melanocytes. The enzyme is regulated by H(2)O(2) in a concentration-dependent manner, where concentrations of 10(-6 )m upregulates the activity. Moreover, we demonstrate the presence of epidermal allantoin in acute vitiligo, while this metabolite is absent in healthy controls. H(2)O(2)-mediated oxidation of Trp and Met in XO yields only subtle alterations in the enzyme active site, which is in agreement with the enzyme kinetics in the presence of 10(-3 )m H(2)O(2). Systemic XO activities are not affected. Taken together, our results provide evidence that epidermal XO contributes to H(2)O(2)-mediated oxidative stress in vitiligo via H(2)O(2)-production and allantoin formation in the epidermal compartment.
- Published
- 2008
291. ORDER PATTERNS RECURRENCE ANALYSIS OF ELECTROENCEPHALOGRAM DURING SEVOFLURANE ANESTHESIA
- Author
-
Hamid Behnam, Jamie Sleigh, and Reza Shalbaf
- Subjects
Artifact (error) ,medicine.diagnostic_test ,business.industry ,Brain activity and meditation ,Biomedical Engineering ,Biophysics ,Bioengineering ,Pattern recognition ,Electroencephalography ,Sevoflurane ,Standard deviation ,Correlation ,Recurrence quantification analysis ,Anesthetic ,medicine ,Artificial intelligence ,business ,Biomedical engineering ,medicine.drug - Abstract
Characterizing the brain activity during anesthesia is considered a major challenge for researchers. The concentration-relevant effect of the sevoflurane is evaluated on EEG signals collected from 19 patients during a proscribed induction and recovery setup. Recurrence Quantification Analysis based on order patterns is employed to provide an index named order laminarity (OLAM) to evaluate changes in the neuronal system. This index computes the activity of a part of brain without considering the number or dynamical nature of the individual sources and signifies segments staying in the same phase space region for a short time. Pharmacokinetic-pharmacodynamic modeling and statistical features are used to assess the effectiveness of the OLAM index compared with response entropy index as implemented in the commercial Datex-Ohmeda Module. Both methods track the overall changes in EEG. However, the OLAM can be proficiently computed and is artifact resistant (standard deviation of 0.016 for OLAM relative to 0.02 for response entropy index). This measure as a neurophysiologic correlation of general anesthesia also reacts quicker to alternations in EEG signals during induction and correlates more powerfully with drug concentration (The prediction probability of 0.89 for OLAM is proportionate to 0.83 for response entropy). This examination exemplifies a crucial translational phase from the neuroscience of consciousness to more intricate monitoring of anesthetic effects in patients.
- Published
- 2015
- Full Text
- View/download PDF
292. Effect of Iron Particles Size on the High-Frequency Magnetic Properties of Iron-Borosilicate Soft Magnetic Composites.
- Author
-
Gheiratmand, T., Madaah Hosseini, H., Shalbaf, F., Mohhebali, M., Mozaffari, M., Arabi, S., and Farzanegan, F.
- Subjects
IRON boron alloys ,BOROSILICATES ,PARTICLE size distribution ,SOFT magnetic materials ,MAGNETIC properties ,HIGH temperatures - Abstract
Iron-borosilicate magnetic composites could be applied as a soft magnetic material in high temperature and high frequency applications. In this research, the magnetic properties of soft magnetic composites with different iron particle sizes made by spark plasma sintering have been investigated. Different magnetic properties such as permeability, loss factor, and quality factor were examined up to frequencies in the order of kilohertz. The microstructural observations indicated the distribution of borosilicate on the iron grain boundaries. The results revealed that the loss factor is smaller for composites with fine particles at high frequencies. In addition, the magnetic impedance for smaller particles was greater. It was also found that the permeability and quality factor of composites with coarse particles are larger than those of fine particles. Indeed, when the particles become coarse, the density of porosities and consequently, the demagnetizing fields decrease which result in the increase of permeability. Furthermore, when the size of particles reduces, the density of grain boundaries enhances which is the main reason of lower loss factor achieved in the composites with fine particles. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
293. Monitoring of shrimp stocks in the coastal waters of the Persian Gulf (Khouzestan Province)
- Author
-
Ansari, Hooshang, Shalbaf, M.R., Kashi, M.T., and Alavi, A.
- Subjects
Monitoring ,Length ,Coastal waters ,M. affinis ,CPUE ,Frequency ,Shrimp stocks ,Sex ratio - Abstract
Study of shrimp stock was carried out from January 2003 to March 2004 in two sampling areas of Khouzestan coastal waters. In this period, eight cruises in Life- Buseif (western coastal area) and six cruises in Bahrekan (eastern coastal area) were carried using shrimp trawl net. In Life- Buseif fishing area, the CPUE of total shrimp was the highest (19.18 kg/ h) in November 2002. This parameter estimated 9.42 kg/ h for M.affinis in March. In this area, the highest biomass of total shrimps was in November 2002 (410.1 t). This value was 204.2 t for M. affinis in same month. Maximum mean length of males and females of M.affinis were observed in December (12.4 & 11.4 cm respectively). Maximum and minimum sex ratio (f: m) of this species was 1.4: 1 in August and 0.89: 1 in December 2002. Relative frequency of shrimp in total catch was observed in December (23%) in Life- Buseif. This parameter was 6.24% in January in Bahrekan area. In Bahrekan fishing area, total shrimp CPUE was highest (3.7 kg/ h) in January, and max. CPUE for M. af inis was 3.2 kg/h in same month. Maximum biomass of total shrimp and M. affinis were 72.9 t and 62.9 t in January. Maximum length of male and female of M.affinis were 13.3 and 11.1 cm (in May and March respectively). Maximum and minimum sex ratio (f: m) of M. af inis was 2.9: 1 in May and 0.8: 1 in February. According to the results of this study, shrimp catch season was opened in Life- Buseif from 6 th Nov until 5th Dec 2003. Winter shrimp catch season has been closed in Bahrekan since 2001. Iranian Fisheries Science Research Institute Published
- Published
- 2005
294. Introducing A Family With Tens of Rare Craniofacial Clefts.
- Author
-
Kalantar-Hormozi, Abdoljalil, Abbaszadeh-Kasbi, Ali, Shalbaf, Shervin, and Davai, Nazanin Rita
- Published
- 2019
- Full Text
- View/download PDF
295. Study of Metapenaeus affinis in coastal waters of Khouzestan province
- Author
-
Ansari, Hooshang, Parsamanesh, A., Shalbaf, M.R., Kashi, M.T., and Alavi, A.
- Subjects
Shrimp ,Metapenaeus affinis ,CPUE - Abstract
Study of M. affinis was carried out from June 2001 to December 2002 in two sampling areas of Khouzestan coastal waters. In this period, 18 cruises in Life- Buseif (western coastal area) and 13 cruises in Bahrekan (eastern coastal area) were came by using shrimp trawl net. In Life- Buseif fishing area, the CPUE of total shrimp was the highest (27.8 kg/ h) in September 2001. This parameter estimated 17.4 kg/ h for M.affinis in March. In this area, the highest biomass of total shrimps was In April 2002 (533.3 t). This value was 380.7! for M. Affinis on March. Maximum mean length of males and females of M.affinis were observed m January (13.4 & 11.5 cm respectively). Maximum and minimum sex ratio (f: m) of this species was 2.25: I July and 0.86: I in October 2002. Relative frequency of shrimp in total catch was observed m March (52.5%) in Life- Buseif. This parameter was 27.3% in February in Bahrekan area. In Bahrekan fishing area, total shrimp CPUE was highest (7.5 kg/ h) in March, and max. CPUE for M. affinis was 6.9 kgffl in same month. Maxmum biomass of total shrimp and M. affinis were 1800.4 t and t in March Maximum length of male and female of M.qffinis were 124 and 11.3 cm in March Maximum and minimum sex ratio (f: m) of M. affinis was 3.51 in May and 09: 1 in January, March and August 2002 respectively. According to the results of this study, shrimp catch season was opened in Life- Buseif from 3rd Nov until 29th Dec 2001 and from 6th Nov until 15th Dec 2002 winter shrimp catch season has been closed in Bahrekan since 2001. Iranian Fisheries Science Research Institute Published
- Published
- 2004
296. Generating 3D anatomically detailed models of the retina from OCT data sets: implications for computational modelling
- Author
-
Shalbaf, Farzaneh, primary, Dokos, Socrates, additional, Lovell, Nigel H., additional, Turuwhenua, Jason, additional, and Vaghefi, Ehsan, additional
- Published
- 2014
- Full Text
- View/download PDF
297. Echocardiography without electrocardiogram using nonlinear dimensionality reduction methods
- Author
-
Shalbaf, Ahmad, primary, AlizadehSani, Zahra, additional, and Behnam, Hamid, additional
- Published
- 2014
- Full Text
- View/download PDF
298. Depth of anesthesia indicator using combination of complexity and frequency measures
- Author
-
Shalbaf, R., primary, Mehrnam, A. H., additional, and Behnam, H., additional
- Published
- 2014
- Full Text
- View/download PDF
299. Monitoring depth of anesthesia using combination of EEG measure and hemodynamic variables
- Author
-
Shalbaf, R., primary, Behnam, H., additional, and Jelveh Moghadam, H., additional
- Published
- 2014
- Full Text
- View/download PDF
300. Stock assessment of Khouzestan fishes
- Author
-
Parsamanesh, Afshin, Shalbaf, M., Eskandari, Gh., and Kashi, M.T.
- Subjects
Species ,Samples ,Fish ,Stock assessment - Abstract
Catch/effort statistics of Khouzestan Province collected from Shilat Statistical System in 1379 have been analyzed. Trends in Khouzestan fisheries from 1372 until 1379 have been also investigated, Length frequency samples collected by catch observers in two main landing centers have also been analyzed. For this purpose, some of the most important commercial fish species were selected for length measurements, the highest no.. of fishing units were operating in Abadan area. Total no. of fishing uints in Khouzestan Province have been increased about 9.3% comparing to the previous year. Total NO. of fishing days were about 174486 days, from which 532% was excreted by speed boats and 46.8% by Lenj. Total landed catch was estimated to be about 24061895 kg which was 0.2% less than the previous year. The highest landed catches belonged to Mid, Otolithes ruber and Tenualosa ilisha respectively, estimated biologic parameters fir the selected species show that in most of the cases their exploitation levels are too high. Iranian Fisheries Science Research Institute Published
- Published
- 2003
Catalog
Discovery Service for Jio Institute Digital Library
For full access to our library's resources, please sign in.