935 results on '"Fonseca, Rodrigo"'
Search Results
252. Scanning the Internet for ROS: A View of Security in Robotics Research
- Author
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DeMarinis, Nicholas, primary, Tellex, Stefanie, additional, Kemerlis, Vasileios P., additional, Konidaris, George, additional, and Fonseca, Rodrigo, additional
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- 2019
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253. A Sociologia Econômica do Direito como Método Interpretativo da Lei de Inovação: o Caso da Indústria de Transformação do Petróleo.
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Tarouco da Fonseca, Rodrigo, Scarpati Costa, Elizardo, and Vaz-Ferreira, Luciano
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- 2021
254. Establishment of suitable reference genes for studying relative gene expression during the transition from trophozoites to cyst-like stages and first evidences of stress-induced expression of meiotic genes in Trichomonas vaginalis.
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Peixoto, Juliana Figueiredo, dos Santos, Daniele Graças, Ribeiro, Lupis, de Oliveira, Vitor Silva Cândido, Nunes-da-Fonseca, Rodrigo, and Nepomuceno-Silva, José Luciano
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GENE expression ,TRICHOMONAS vaginalis ,REVERSE transcriptase polymerase chain reaction ,TROPHOZOITES ,SEXUALLY transmitted diseases ,MEIOSIS ,TRICHOMONIASIS - Abstract
Trichomonas vaginalis is a parasite of the human urogenital tract and the causative agent of trichomoniasis, a sexually transmitted disease of worldwide importance. This parasite is usually found as a motile flagellated trophozoite. However, when subjected to stressful microenvironmental conditions, T. vaginalis trophozoites can differentiate into peculiar cyst-like stages, which exhibit notable physiological resistance to unfavourable conditions. Although well documented in morphological and proteomic terms, patterns of gene expression changes involved in the cellular differentiation into cyst-like stages are mostly unknown. The real-time reverse transcription polymerase chain reaction (RT-qPCR) is recognized as a sensitive and accurate method for quantification of gene expression, providing fluorescence-based data that are proportional to the amount of a target RNA. However, the reliability of relative expression studies depends on the validation of suitable reference genes, which RNAs exhibit a minimum of variation between tested conditions. Here, we attempt to determine suitable reference genes to be used as controls of invariant expression during cold-induced in vitro differentiation of T. vaginalis trophozoites into cyst-like forms. Furthermore, we reveal that the mRNA from the meiotic recombinase Dmc1 is upregulated during this process, indicating that cryptic sexual events may take place in cyst-like stages of T. vaginalis. [ABSTRACT FROM AUTHOR]
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- 2021
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255. Fog signaling has diverse roles in epithelial morphogenesis in insects
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Benton, Matthew Alan, Frey, Nadine, da Fonseca, Rodrigo Nunes, von Levetzow, Cornelia, Stappert, Dominik, Hakeemi, Muhammad Salim, Conrads, Kai H., Pechmann, Matthias, Panfilio, Kristen A., Lynch, Jeremy A., Roth, Siegfried, Benton, Matthew Alan, Frey, Nadine, da Fonseca, Rodrigo Nunes, von Levetzow, Cornelia, Stappert, Dominik, Hakeemi, Muhammad Salim, Conrads, Kai H., Pechmann, Matthias, Panfilio, Kristen A., Lynch, Jeremy A., and Roth, Siegfried
- Abstract
The Drosophila Fog pathway represents one of the best-understood signaling cascades controlling epithelial morphogenesis. During gastrulation, Fog induces apical cell constrictions that drive the invagination of mesoderm and posterior gut primordia. The cellular mechanisms underlying primordia internalization vary greatly among insects and recent work has suggested that Fog signaling is specific to the fast mode of gastrulation found in some flies. On the contrary, here we show in the beetle Tribolium, whose development is broadly representative for insects, that Fog has multiple morphogenetic functions. It modulates mesoderm internalization and controls a massive posterior infolding involved in gut and extraembryonic development. In addition, Fog signaling affects blastoderm cellularization, primordial germ cell positioning, and cuboidal-to-squamous cell shape transitions in the extraembryonic serosa. Comparative analyses with two other distantly related insect species reveals that Fog's role during cellularization is widely conserved and therefore might represent the ancestral function of the pathway.
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- 2019
256. Brazilian silverside, Atherinella brasiliensis (Quoy & Gaimard, 1825) embryos as a test-species for marine fish ecotoxicological tests.
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Martins Feitosa, Natália, Nicolas Calderon, Emiliano, Nascimento da Silva, Rhennã, Rezende de Melo, Sônia Lopes, Souza-Menezes, Jackson, Nunes-da-Fonseca, Rodrigo, and Vieira Reynier, Márcia
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MARINE fishes ,EMBRYOS ,EMBRYOLOGY ,TOXICITY testing ,HAZARDS ,CHRONIC toxicity testing - Abstract
The fish embryo test (FET) is an alternative to the classic freshwater toxicity test used to assess environmental hazards and risks to fish. This test has been standardized and adopted by the Organization for Economic and Cooperation and Development (OECD). As salinity may affect the substances' toxicity, we describe the development of an alternative euryhaline test species for embryonic ecotoxicological tests: the Brazilian silverside Atherinella brasiliensis (Quoy & Gaimard, 1825). This species is broadly distributed along the coast of South America and is able to inhabit a broad range of environmental and saline conditions. Ours is the first study on the maintenance of a native South American species for natural reproduction and the generation of embryos for tests. The embryos used are transparent and possess fluorescent cells which have only been seen in a few species and which may be used as markers, making it an alternative assessment tool for the lethal and sublethal substances in marine and estuarine environments. We provide a detailed description and analysis of embryonic development under different salinities and temperatures. The embryos and larvae developed in similar ways at different salinities, however as temperatures increased, mortality also increased. We considered the effects of the reference toxicants Zn2+ and SDS using a protocol similar to the FET that was standardized for zebrafish. Brazilian silverside embryos are as sensitive as freshwater, or euryhaline fish, to the surfactant but are more resistant to metals prior to hatching. We were able to show the advantages of the Brazilian silverside as a model for a marine fish embryo test (FETm) with high levels of reproducibility and little contaminated waste. [ABSTRACT FROM AUTHOR]
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- 2021
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257. Business-oriented resource management policies for e-commerce servers
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Menascé, Daniel A, Almeida, Virgilio A.F, Fonseca, Rodrigo, and Mendes, Marco A
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- 2000
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258. Fog signaling has diverse roles in epithelial morphogenesis in insects
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Benton, Matthew A., primary, Frey, Nadine, additional, da Fonseca, Rodrigo Nunes, additional, von Levetzow, Cornelia, additional, Stappert, Dominik, additional, Hakeemi, Muhammad S., additional, Conrads, Kai H., additional, Pechmann, Matthias, additional, Panfilio, Kristen A., additional, Lynch, Jeremy A., additional, and Roth, Siegfried, additional
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- 2019
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259. EXPERIMENTAL AND NON INVASIVE FUEL CONSUMPTION MEASUREMENT FOR INTERNAL COMBUSTION ENGINES BASED ON OTTO CYCLE
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Alves da Silva, Emerson, primary, Baeta, Jose, additional, Fonseca, Rodrigo, additional, Maia, Antônio, additional, and Ferreira, André, additional
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- 2019
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260. RECORTES DISCURSIVOS, PARADIGMA INDICIÁRIO E PROCEDIMENTOS CONTRAINDUTIVOS
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Beck, Maurício, primary, Fonseca, Rodrigo Oliveira, additional, and Santos, Aretuza Pereira dos, additional
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- 2019
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261. A CONTEMPORANEIDADE DOS ESTUDOS DE PÊCHEUX: RESSONÂNCIAS E ATUALIZAÇÕES EM SOLO BRASILEIRO
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Daltoé, Andréia da Silva, primary, Fernandes, Carolina, additional, and Fonseca, Rodrigo Oliveira, additional
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- 2019
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262. Factors Associated With Seizure Adequacy Along the Course of Electroconvulsive Therapy.
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Tedeschi, Eduardo Antonio, Patusco, Lucas Mohr, Zahler, Sofia, Martini, Murilo, Chiavaro da Fonseca, Rodrigo, and Magalhães, Pedro V.S.
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- 2021
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263. Simulídeos (simuliidae: diptera) como objeto de estudo no Brasil e no mundo.
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Rodrigues da Costa Marinho, Willian, Guimarães dos Santos, Ruann, Santos da Cruz, Lucas, Vilela Borges, Isabelle Chagas, Maravilha Medeiros, Beatriz, Alves da Silva, Rodrigo, Karl Araujo, Aline, de Souza Menezes, Jackson, Martins Feitosa, Natália, Portella Pereira, Ronaldo Figueiró, and Nunes da Fonseca, Rodrigo
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ARTHROPODA ,DIPTERA ,INDUSTRIAL wastes ,PHYLOGENETIC models - Abstract
Copyright of Nature & Conservation is the property of CBPC - Companhia Brasileira de Producao Cientifica and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
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- 2020
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264. Influence of preheating and post-curing on a novel fiber-reinforced composite post material
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ALMEIDA, Letícia Nunes de, primary, MENDES, Gustavo Adolfo Martins, additional, FAVARÃO, Isabella Negro, additional, KASUYA, Amanda Vessoni Barbosa, additional, BORGES, Marcela Gonçalves, additional, MENEZES, Murilo de Sousa, additional, and FONSECA, Rodrigo Borges, additional
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- 2018
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265. Weighted Sampling of Execution Traces
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Las-Casas, Pedro, primary, Mace, Jonathan, additional, Guedes, Dorgival, additional, and Fonseca, Rodrigo, additional
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- 2018
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266. Molecular and functional characterization of single-box high-mobility group B (HMGB) chromosomal protein from Aedes aegypti
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de Abreu da Silva, Isabel Caetano, primary, Vicentino, Amanda Roberta Revoredo, additional, dos Santos, Renata Coutinho, additional, da Fonseca, Rodrigo Nunes, additional, de Mendonça Amarante, Anderson, additional, Carneiro, Vitor Coutinho, additional, de Amorim Pinto, Marcia, additional, Aguilera, Estefania Anahi, additional, Mohana-Borges, Ronaldo, additional, Bisch, Paulo Mascarello, additional, da Silva-Neto, Mario Alberto Cardoso, additional, and Fantappié, Marcelo Rosado, additional
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- 2018
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267. Novel and Selective Rhipicephalus microplus Triosephosphate Isomerase Inhibitors with Acaricidal Activity
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Saramago, Luiz, primary, Gomes, Helga, additional, Aguilera, Elena, additional, Cerecetto, Hugo, additional, González, Mercedes, additional, Cabrera, Mauricio, additional, Alzugaray, Maria, additional, da Silva Vaz Junior, Itabajara, additional, Nunes da Fonseca, Rodrigo, additional, Aguirre-López, Beatriz, additional, Cabrera, Nallely, additional, Pérez-Montfort, Ruy, additional, Merlino, Alicia, additional, Moraes, Jorge, additional, and Álvarez, Guzmán, additional
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- 2018
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268. The dynamics of energy metabolism in the tick embryo
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Martins, Renato, primary, Ruiz, Newton, additional, Fonseca, Rodrigo Nunes da, additional, Vaz Junior, Itabajara da Silva, additional, and Logullo, Carlos, additional
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- 2018
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269. Universal context propagation for distributed system instrumentation
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Mace, Jonathan, primary and Fonseca, Rodrigo, additional
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- 2018
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270. Rehabilitation of periodontally compromised teeth with fiber-reinforced composite resin: A case report.
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Hoeppner, Márcio Grama, Fonseca, Rodrigo Borges, Pfau, Eduardo Augusto, Justo, Flávio Roberto Machado, Fávero, Alexandre, and Bremm, Laerte Luiz
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PERIODONTAL disease treatment ,PERIODONTIUM ,ALVEOLAR process ,BONE resorption ,BRIDGES (Dentistry) ,DENTAL resins ,COSMETIC dentistry ,DENTAL extraction ,REHABILITATION ,SURGERY - Abstract
The rehabilitation of prosthetic spaces resulting from severe periodontitis represents a challenge in terms of functional and esthetic aspects. Generally, tooth extraction is followed by alveolar ridge volume reduction, which increases the esthetic problem. The aim of this article is to report the integration of esthetics and functional parameters in the oral rehabilitation of extracted periodontally compromised mandibular central incisors through the construction of a direct glass fiber-reinforced composite fixed partial denture (DFPD). After periodontal therapy, the patient received a periodontal subepithelial graft, enabling an increase in the thickness and height of the alveolar ridge. The DFPD was fabricated with the use of extracted teeth. Mandibular canines and lateral incisors received cavities 2 mm deep and wide. After fiber insertion, tooth adaptation, and composite resin coverage, the teeth were finished and polished. Results showed an excellent esthetic result with stabilization and function of the remaining periodontally affected teeth. [ABSTRACT FROM AUTHOR]
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- 2011
271. Influence of Provisional Cements on Ultimate Bond Strength of Indirect Composite Restorations to Dentin.
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Fonseca, Rodrigo Borges, Martins, Luis Roberto Marcondes, Quagliatto, Paulo Sérgio, and Soares, Carlos José
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DENTAL cements ,DENTAL bonding ,DENTAL fillings ,DENTIN ,OPERATIVE dentistry ,COSMETIC dentistry ,DENTAL adhesives ,DENTAL materials - Abstract
Purpose: The aim of this study was to evaluate the effect of provisional cements on the adhesion of resin bonded indirect restorations and determine the best method for avoiding adverse effects. Materials and Methods: Forty-five bovine incisors were selected, and the enamel removed with a 600-grit SiC abrasive disk to expose superficial dentin. Provisional restorations of acrylic resin were cemented with three different provisional cements: calcium hydroxide cement, Dycal (HC); cement containing zinc oxide-eugenol, Provy (ZOE); zinc oxide eugenol-free cement, TempBond NE (ZNE). The specimens were stored at 100% humidity, 37°C. Then provisional restorations were removed with: (1) hand scaler for 10 s; (2) pumice-water slurry for 10 s; (3) aluminum oxide sandblasting for 10 s. The indirect restorations were subsequently cemented with Single Bond and Rely-X ARC. The teeth were sectioned, 4 slices per tooth (n = 16), and each slice trimmed with a diamond bur to obtain an adhesion area of 1 mm². The microtensile bond strength test was performed with a universal testing machine (Instron-4411) at a crosshead speed of 0.5 mm/min. The results were analyzed with ANOVA, followed by Tukey's test (p < 0.05). Results: ANOVA showed significant differences in the interaction between provisional cement and dentin cleaning method; in general, aluminum oxide sandblasting provided the highest values of bond strength and calcium hydroxide the lowest. Conclusion: The type of provisional cement and its method of removal can affect the adhesion of resin-bonded indirect restorations. [ABSTRACT FROM AUTHOR]
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- 2005
272. Encuesta nacional a médicos colegiados sobre Medicinas Complementarias / Integrativas
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Ledezma, Christine, Villarroel, Eva, Vega, Ernesto, Sepúlveda, Jaime, Calderón, David, Grandon, Pedro, Schifferli, Fernando, Kelly, Maeve, Navarrete, Carlos, Lastra, Jorge, Rosas, Álvaro, Silva, Pedro, Fonseca, Rodrigo, Ledezma, Christine, Villarroel, Eva, Vega, Ernesto, Sepúlveda, Jaime, Calderón, David, Grandon, Pedro, Schifferli, Fernando, Kelly, Maeve, Navarrete, Carlos, Lastra, Jorge, Rosas, Álvaro, Silva, Pedro, and Fonseca, Rodrigo
- Abstract
A nivel nacional e internacional ha habido un aumento en el interés sobre la Medicina Complementaria (MC), sin embargo, no existen estudios que dimensionen el conocimiento y opinión que los médicos chilenos tienen sobre estas terapias. Objetivo: Describir el conocimiento y la opinión sobre MC existente entre los médicos miembros del Colegio Médico de Chile. Material y métodos: Se realizó una encuesta anónima y voluntaria con preguntas diseñadas por miembros del Comité de Medicinas Integrativas del Colegio Médico. Esta encuesta se aplicó a los médicos inscritos en el Colegio Médico de Chile. Resultados: La encuesta fue respondida por 1758 médicos. El 55,9% de los participantes considera que las terapias complementarias son útiles, mientras que solo el 9,7% considera que estas terapias son insatisfactorias o inútiles. Entre los encuestados que no evaluaron positivamente la MC, 40,08% carecían de información suficiente y 51,16% afirmaron que tenían información y consideraron que no eran útiles. En el caso de los encuestados que evaluaron positivamente las MC, el 40% recomienda su uso. El 69.4% de los médicos encuestados usan o indican MC a sus pacientes, de los cuales el 98.5% los usa o los indica en combinación con medicamentos convencionales. El 73% piensa que la educación y la comunicación de estas terapias deberían ser mayores. El 83.1% de los encuestados afirma que la educación de la MC se debería realizar a nivel Universitario. Conclusiones: En general se observa interés y una buena percepción hacia la MC, aunque un grado importante de desconocimiento y bajo nivel de formación universitaria en el área, lo que hace importan- te aportar a su conocimiento desde la evidencia y formalizar instancias formativas de calidad. El uso de las MC se realiza casi en su totalidad en combinación con la práctica convencional, considerándose relevante la supervisión médica y el uso del consentimiento informado en su práctica segura. Se deben realizar más estudios para profundizar
- Published
- 2018
273. Mitigando Efectos Adversos de Interrupciones del Servicio de Video-vigilancia del Hogar en Clientes WiFi inalámbricos
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Ministerio de Economía y Competitividad, Gualotuña, Tatiana, Macias, Elsa, Suarez, Alvaro, Fonseca, Rodrigo, Rivadenera, Andrés, Ministerio de Economía y Competitividad, Gualotuña, Tatiana, Macias, Elsa, Suarez, Alvaro, Fonseca, Rodrigo, and Rivadenera, Andrés
- Abstract
[ES] Actualmente los sistemas de videovigilancia en el Hogar se pueden combinar con sensores para formar un sistema de muy bajo coste y fácil manejo por parte del usuario final. Un componente importante en este sistema es el servidor de video streaming en tiempo real a clientes Web que usan Wireless Fidelity. El servidor se puede instalar en open hardware como el Raspberry Pi y se puede ayudar de sensores arduino para detectar alarmas de intrusión o condiciones domóticas adversas en el Hogar. Sin embargo, el Wireless Fidelity tiene conocidos problemas que provoca interrupciones esporádicas e impredecibles del servicio de video y de poca duración que provocan la pérdida de frames de video clave para observar el estado del hogar en un momento dado, mientras el cliente se mueve (después de recibir una alarma). Mitigar los efectos adversos de estas interrupciones es una tarea complicada que hemos trabajado durante años. La novedad es que ahora construimos u sistema de open hardware embebida y de bajo coste (con utilidad práctica a los ciudadanos), y software libre íntegramente basado en servicios Web que es interoperable y basado en ontologías (para incluir decisiones sofisticadas, smart, de reconectar el servicio interrumpido). El elevado valor de parámetros de calidad de experiencia de usuario avalan los buenos resutlados alcanzados.
- Published
- 2018
274. Sociedades abertas : algumas questões levantadas pelo Insider Trading em Portugal
- Author
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Fonseca, Rodrigo Sá Pereira Ribeiro da and Baptista, Daniela Farto
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Ciências Sociais::Direito [Domínio/Área Científica] - Abstract
Submitted by Cristina Afonso (cac@lisboa.ucp.pt) on 2017-11-02T11:00:48Z No. of bitstreams: 1 Tese final Rodrigo.pdf: 759736 bytes, checksum: 738a036a43dd10eca8407305cea2e8aa (MD5) Approved for entry into archive by Cristina Afonso (cac@lisboa.ucp.pt) on 2017-11-02T11:01:01Z (GMT) No. of bitstreams: 1 Tese final Rodrigo.pdf: 759736 bytes, checksum: 738a036a43dd10eca8407305cea2e8aa (MD5) Made available in DSpace on 2017-11-02T11:01:01Z (GMT). No. of bitstreams: 1 Tese final Rodrigo.pdf: 759736 bytes, checksum: 738a036a43dd10eca8407305cea2e8aa (MD5) Previous issue date: 2017-05-15
- Published
- 2017
275. Frequency of brain tissue donation for research after suicide
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Longaray, Vanessa Kenne, Padoan, Carolina Stopinski, Goi, Pedro Domingues, Fonseca, Rodrigo Chiavaro da, Vieira, Daniel Chaves, Oliveira, Francine Hehn de, and Kapczinski, Flávio Pereira
- Subjects
Ethics ,Suicide ,Neuroanatomy ,Molecular biology ,Brasil ,Doadores de tecidos ,Community mental health ,Autópsia ,Doenças neurodegenerativas ,Consentimento livre e esclarecido - Abstract
Objectives: To describe the frequency of brain tissue donation for research purposes by families of individuals that committed suicide. Methods: All requests for brain tissue donation to a brain biorepository made to the families of individuals aged 18-60 years who had committed suicide between March 2014 and February 2016 were included. Cases presenting with brain damage due to acute trauma were excluded. Results: Fifty-six cases of suicide were reported. Of these, 24 fulfilled the exclusion criteria, and 11 others were excluded because no next of kin was found to provide informed consent. Of the 21 remaining cases, brain tissue donation was authorized in nine (tissue fragments in seven and the entire organ in two). Conclusions: Donation of brain tissue from suicide cases for research purposes is feasible. The acceptance rate of 42.8% in our sample is in accordance with international data on such donations, and similar to rates reported for neurodegenerative diseases.
- Published
- 2017
276. Maternal or zygotic: Unveiling the secrets of the Pancrustacea transcription factor zelda
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Nunes da Fonseca, Rodrigo, primary and Venancio, Thiago M., additional
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- 2018
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277. Influence of voxel size on cone-beam computed tomography-based detection of vertical root fractures in the presence of intracanal metallic posts
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Yamamoto-Silva, Fernanda Paula, primary, de Oliveira Siqueira, Claudeir Felipe, additional, Silva, Maria Alves Garcia Santos, additional, Fonseca, Rodrigo Borges, additional, Santos, Ananda Amaral, additional, Estrela, Carlos, additional, and de Freitas Silva, Brunno Santos, additional
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- 2018
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278. Compreensão psicodinâmica do ciclo vital de Daenerys Targaryen, personagem da série Game of Thrones
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Martini, Murilo, Fonseca, Rodrigo Chiavaro da, Garbin, Henrique Iahnke, and Bassols, Ana Margareth Siqueira
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Life Cycle ,Psychological resilience ,Resiliência psicológica ,Período de latência (Psicologia) ,Latency Period (Psychology) ,Estágios do ciclo de vida - Abstract
Este artigo analisa os aspectos psicológicos da personagem Daenerys Targaryen, da série Game of thrones, buscando essencialmente avaliar sua evolução cognitiva, social e comportamental, bem como os conflitos vivenciados em seu ciclo vital e os respectivos mecanismos de enfrentamento das adversidades. Por meio da interpretação subjetiva das simbologias metafóricas citadas na narrativa, extrapola-se a leitura literal da obra, com vistas a compreender também as representações da esfera inconsciente da personagem. Daenerys tem infância conturbada pela morte dos pais, pela fuga da cidade natal, pelo exílio e pelos maus-tratos cometidos pelo irmão. Ademais, são-lhe impostos casamento e erotização precoces, eventos que desrespeitam seu tempo de amadurecimento psíquico, desencadeando encurtamento das fases do seu ciclo vital e desestabilização do processo de latência e desenvolvimento puberal. Contudo, as experiências que vivencia no período, tais quais a gestação e a emancipação por que passa, associadas a variantes inatas da sua personalidade – a exemplo do temperamento dócil, inteligência e autoconfiança na capacidade de resolução de vicissitudes –, permitem a expressão de uma figura icônica de resiliência, com ativação de defesas maduras frente a crises vitais ou acidentais. O estudo permitiu discutir aspectos da realidade contemporânea do desenvolvimento humano e proceder à observação de diversos mecanismos de funcionamento psíquico, além da interação entre variantes intrínsecas e extrínsecas moduladoras da expressão de resiliência frente às dificuldades. Este artigo visa a contribuir para o estudo da teoria psicodinâmica e deve interessar a profissionais da medicina e da psicologia. This article analyzes the psychological aspects of character Daenerys Targaryen, from Game of Thrones’ series, seeking essentially to evaluate her cognitive, social and behavioral evolution, as well as the conflicts experienced to each stage of her life cycle and related adversity coping mechanisms. Through subjective interpretation of metaphoric symbols mentioned in the narrative, the literal reading of the story is extrapolated in order to also comprehend representations of the character’s unconscious domain. Daenerys goes through a troubled childhood due to her parents’ death, fleeing from her home city, exile and mistreatment committed by her brother. Furthermore, events like marriage and early erotization are imposed to her, which disrespect her psychic development timing, causing shortening of her life cycle’s stages, and destabilization of the latency phase process and her pubertal development. Nevertheless, the experiences she goes through in this period, such as pregnancy and emancipation, associated to innate variants of her personality – docile temperament, high cognition and self-confidence in the ability of resolving difficulties –, allow the expression of a resilient iconic figure, with the activation of mature defenses when facing vital or accidental crises. The study allows transpositions to contemporaneous reality of human development and observation of several mechanisms of psychic functions, besides the interaction between intrinsic and extrinsic variants, which modulate the expression of resilience when confronting distress. It contributes to the study of psychodynamic theory and may be of interest to doctors and psychologists, especially those directly involved in psychic development.
- Published
- 2016
279. Erratum to :'Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection' (vol 112, pg 14936, 2015)
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Lowenberger, Carl, Rivera Pomar, Rolando, Monteiro, Fernando A., Minx, Patrick, Spieth, John, Bernardo Carvalho, A., Panzera, Francisco, Lawson, Daniel, Torres, Andre Q., Ribeiro, Jose M. C., Sorgine, Marcos H. F., Waterhouse, Robert M., Montague, Michael J., Abad Franch, Fernando, Alves Bezerra, Michele, Amaral, Laurence R., Araujo, Helena M., Araujo, Ricardo N., Aravind, L., Atella, Georgia C., Azambuja, Patricia, Berni, Mateus, Bittencourt Cunha, Paula R., Braz, Gloria R. C., Calderon Fernandez, Gustavo, Carareto, Claudia M. A., Christensen, Mikkel B., Costa, Igor R., Costa, Samara G., Dansa, Marilvia, Daumas Filho, Carlos R. O., De Paula, Iron F., Dias, Felipe A., Dimopoulos, George, Emrich, Scott J., Esponda Behrens, Natalia, Fampa, Patricia, Fernandez Medina, Rita D., da Fonseca, Rodrigo N., Fontenele, Marcio, Fronick, Catrina, Fulton, Lucinda A., Gandara, Ana Caroline, Garcia, Eloi S., Genta, Fernando A., Giraldo Calderón, Gloria I., Gomes, Bruno, Gondim, Katia C., Granzotto, Adriana, Guarneri, Alessandra A., Guigó, Roderic, Harry, Myriam, Hughes, Daniel S. T., Jablonka, Willy, Jacquin Joly, Emmanuelle, Patricia Juarez, M., Koerich, Leonardo B., Latorre Estivalis, Jose Manuel, Lavore, Andrés, Lawrence, Gena G., Lazoski, Cristiano, Lazzari, Claudio R., Lopes, Raphael R., Lorenzo, Marcelo G., Lugon, Magda D., Majerowicz, David, Marcet, Paula L., Mariotti, Marco, Masuda, Hatisaburo, Megy, Karine, Melo, Ana C.A., Missirlis, Fanis, Mota, Theo, Noriega, Fernando G., Nouzova, Marcela, Nunes, Rodrigo D., Oliveira, Raquel L.L., Oliveira Silveira, Gilbert, Ons, Sheila, Pagola, Lucia, Paiva Silva, Gabriela O., Pascual, Agustina, Pavan, Marcio G., Pedrini, Nicolas, Peixoto, Alexandre A., Pereira, Marcos H., Pike, Andrew, Polycarpo, Carla, Prosdocimi, Francisco, Ribeiro Rodrigues, Rodrigo, Robertson, Hugh M., Salerno, Ana Paula, Salmon, Didier, Santesmasses, Didac, Schama, Renata, Seabra Junior, Eloy S., Silva Cardoso, Livia, Mesquita, Rafael D., and Vionette Amaral, Raquel J.
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rhodnius prolixus ,Rhodnius prolixus ,genome ,hematophagy ,immunity ,Chagas disease ,maladie de chagas - Abstract
Rhodnius prolixus not only has served as a model organism for the study of insect physiology, but also is a major vector of Chagas disease, an illness that affects approximately seven million people worldwide. We sequenced the genome of R. prolixus, generated assembled sequences covering 95% of the genome (similar to 702 Mb), including 15,456 putative protein-coding genes, and completed comprehensive genomic analyses of this obligate blood-feeding insect. Although immune-deficiency (IMD)-mediated immune responses were observed, R. prolixus putatively lacks key components of the IMD pathway, suggesting a reorganization of the canonical immune signaling network. Although both Toll and IMD effectors controlled intestinal microbiota, neither affected Trypanosoma cruzi, the causal agent of Chagas disease, implying the existence of evasion or tolerance mechanisms. R. prolixus has experienced an extensive loss of selenoprotein genes, with its repertoire reduced to only two proteins, one of which is a selenocysteine-based glutathione peroxidase, the first found in insects. The genome contained actively transcribed, horizontally transferred genes from Wolbachia sp., which showed evidence of codon use evolution toward the insect use pattern. Comparative protein analyses revealed many lineage-specific expansions and putative gene absences in R. prolixus, including tandem expansions of genes related to chemoreception, feeding, and digestion that possibly contributed to the evolution of a blood-feeding lifestyle. The genome assembly and these associated analyses provide critical information on the physiology and evolution of this important vector species and should be instrumental for the development of innovative disease control methods.
- Published
- 2016
280. HyperDrive
- Author
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Rasley, Jeff, primary, He, Yuxiong, additional, Yan, Feng, additional, Ruwase, Olatunji, additional, and Fonseca, Rodrigo, additional
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- 2017
- Full Text
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281. Pivot Tracing
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Mace, Jonathan, primary, Roelke, Ryan, additional, and Fonseca, Rodrigo, additional
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- 2017
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282. Toward Usable Network Traffic Policies for IoT Devices in Consumer Networks
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DeMarinis, Nicholas, primary and Fonseca, Rodrigo, additional
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- 2017
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- View/download PDF
283. Mitigando Efectos Adversos de Interrupciones del Servicio de Video-vigilancia del Hogar en Clientes WiFi inalámbricos
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Suarez, Alvaro, primary, Gualotuña, Tatiana, additional, Macias, Elsa, additional, Fonseca, Rodrigo, additional, and Ribadaneira, Andrés, additional
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- 2017
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- View/download PDF
284. Evolution and multiple roles of the Pancrustacea specific transcription factor zelda in insects
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Ribeiro, Lupis, primary, Tobias-Santos, Vitória, additional, Santos, Daniele, additional, Antunes, Felipe, additional, Feltran, Geórgia, additional, de Souza Menezes, Jackson, additional, Aravind, L., additional, Venancio, Thiago M., additional, and Nunes da Fonseca, Rodrigo, additional
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- 2017
- Full Text
- View/download PDF
285. Diabetic rats present higher urinary loss of proteins and lower renal expression of megalin, cubilin, ClC-5, and CFTR
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Figueira, Miriam F., primary, Castiglione, Raquel C., additional, de Lemos Barbosa, Carolina M., additional, Ornellas, Felipe M., additional, da Silva Feltran, Geórgia, additional, Morales, Marcelo M., additional, da Fonseca, Rodrigo N., additional, and de Souza-Menezes, Jackson, additional
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- 2017
- Full Text
- View/download PDF
286. Molecular control of gut formation in the spiderParasteatoda tepidariorum
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Feitosa, Natália Martins, primary, Pechmann, Matthias, additional, Schwager, Evelyn E., additional, Tobias-Santos, Vitória, additional, McGregor, Alistair P., additional, Damen, Wim G. M., additional, and Nunes da Fonseca, Rodrigo, additional
- Published
- 2017
- Full Text
- View/download PDF
287. Rhodnius prolixus: From classical physiology to modern developmental biology
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Nunes-da-Fonseca, Rodrigo, primary, Berni, Mateus, additional, Tobias-Santos, Vitória, additional, Pane, Attilio, additional, and Araujo, Helena Marcolla, additional
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- 2017
- Full Text
- View/download PDF
288. Evolution and multiple roles of the Pancrustacea specific transcription factorzeldain insects
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Ribeiro, Lupis, primary, Tobias-Santos, Vitória, additional, Santos, Danielle, additional, Antunes, Felipe, additional, Feltran, Geórgia, additional, de Souza Menezes, Jackson, additional, Aravind, L., additional, Venancio, Thiago Motta, additional, and Fonseca, Rodrigo Nunes da, additional
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- 2017
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289. The influence of geographical and cultural issues on the cache proxy server workload
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Almeida, Virgilio F., Cesario, Marcio G., Fonseca, Rodrigo C., Meira, Wagner, Jr., and Murta, Cristina
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World Wide Web -- Demographic aspects ,Gateways (Computer networks) -- Analysis ,Business ,Computers and office automation industries - Abstract
An analysis of a busy cache proxy server yielded geographical and cultural differences between users in the use of the Internet. Brazilians showed a propensity for accessing chat sites, while the Internet users in the US, Brazil, Japan, Italy and Taiwan showed accesses to sites in the national domain. These cultural and geographic issues are helpful in managing access traffic in servers.
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- 1998
290. Michel Pêcheux e a crítica aos recalques da história e da língua
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Fonseca, Rodrigo Oliveira
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ciência ,Michel Pêcheux ,circularidade ,interpretação - Abstract
O presente artigo se propõe a percorrer algumas obras de Michel Pêcheux em busca das críticas que o autor apresentou ao problema da circularidade na interpretação dos textos, que, dito de outra forma, é o problema de se “encontrar” na leitura aquilo que se procura. Problema clássico da sobre-interpretação estruturalista, como também do relativismo. O dispositivo teórico de Análise de Discurso proposto por Michel Pêcheux não “puxa o analista pelos cabelos”, livrando-o da história, da exterioridade e dos pragmatismos de mundos semanticamente normais. Pelo contrário, tal dispositivo sublinha e torna pertinente a opção por não se recalcar a memória e seus preenchimentos/capturas que incidem na forma de interdiscurso – entendido enquanto “corpus sócio-histórico de traços discursivos” (PÊCHEUX, 2011 [1982]) –, o que nos conduz para a ordem equívoca da língua, locus privilegiado onde se dão, de modo opaco e diverso, as reinscrições de memória.
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- 2015
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- View/download PDF
291. La Semiótica como herramienta dicotómica a la investigación.
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SANTILLÁN TRUJILLO, Mónica, FONSECA, Rodrigo, ABREU, Omar, RON, Mario, and MEJÍA, Rebeca
- Abstract
Copyright of Revista Espacios is the property of Talleres de Impresos Oma and its content may not be copied or emailed to multiple sites or posted to a listserv without the copyright holder's express written permission. However, users may print, download, or email articles for individual use. This abstract may be abridged. No warranty is given about the accuracy of the copy. Users should refer to the original published version of the material for the full abstract. (Copyright applies to all Abstracts.)
- Published
- 2020
292. Escavações arqueológicas na igreja Nossa Senhora da Conceição, Rio Grande, Rio Grande do Sul, Brasil
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Ribeiro, Pedro Augusto Mentz, Pestana, Marlon Borges, Fonseca, Rodrigo Germano, and Weska, Tatiana Farias
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lcsh:Z ,lcsh:Bibliography. Library science. Information resources - Abstract
O projeto teve como objetivo completar, através da cultura material, lacunas da história da igreja Nossa Senhora da Conceição (1874) e da região onde está inserida. Foram realizados cortes experimentais na parte externa (fundos) e interna do templo (altar e nave central). O perfil estratigráfico do pátio apresentou cinco camadas, alcançando 1,90m de profundidade, já o interno revelou três camadas e a profundidade de 1,20m. Escavações foram realizadas ao redor de uma estrutura (poço) encontrada na nave lateral esquerda, junto ao altar, 0,60cm abaixo do piso atual. O poço mede 2,25m de diâmetro interno, 0,33m de espessura (comprimento dos tijolos) e 0,02m de reboco. Material resgatado: cerâmica (vasilhas das tradições Tupiguarani, Vieira e Neobrasileira e cachimbo da Neobrasileira); cerâmica colonial e colonial vidrada; louça (faiança, faiança fina, ironstone, salt-glazed, etc.); vidro (garrafas, taças, toucador, frascos de remédio, etc.); metal (lâmina de machado, colher, armadilha para animais, tesouras, chaves, cravos, pregos, panelas fragmentadas, moedas portuguesas e do Brasil Império etc.); osso (botões, cabos e restos de alimentação); lítico: material (afiador de faca, lousas, ponteiras, etc.); matéria-prima (ardósia, quartzo leitoso, granito, arenito etc.). O material arqueológico foi classificado, restaurado, analisado, fotografado, desenhado, foram confeccionadas tabelas e o material foi acondicionado conforme método Mentz Ribeiro (2004); em gabinete, realizaram-se estudos comparativos, a arte final e redação do presente artigo científico para publicação. Entre os resultados preliminares, concluímos que o poço pertencia a uma residência situada ao oeste, provavelmente junto à rua, ou seria um dos dez que abasteciam a cidade por volta de 1860. Com o início da construção da igreja (1872), o mesmo teria sido aterrado. Não foram encontrados vestígios do forte Jesus-Maria-José, de 1737, descartando uma tradição oral de que a igreja teria sido construída sobre aquela construção militar, marco da colonização portuguesa no Rio Grande do Sul.
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- 2006
293. Age and sex trends for suicide in Brazil between 2000 and 2016.
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Martini, Murilo, da Fonseca, Rodrigo Chiavaro, de Sousa, Mathias Hasse, de Azambuja Farias, Clarisse, Cardoso, Taiane de Azevedo, Kunz, Mauricio, Longaray, Vanessa Kenne, and Magalhães, Pedro Vieira da Silva
- Subjects
SUICIDE statistics ,OLDER men ,SUICIDE ,GENDER ,MIDDLE-aged women ,AGE - Abstract
Purpose: To evaluate changes in standardized suicide rates in Brazil between 2000 and 2016, stratified by sex and age.Methods: Descriptive analyses of data from the Brazilian Mortality Information System were performed.Results: 156,292 suicides were registered in the period, with a standardized rate of 4.82/100,000. The risk for males was 3.81 times higher than for females, without meaningful regional variations. This ratio was 8.2 at the 80+ group. An increase from 2000 to 2016 was demonstrated in nearly all subgroups over the 17, especially men aged 20-39 and women aged 40-59.Conclusions: Suicide rates continue to rise in Brazil, especially among young men and middle-aged women. Older men remain exposed to the highest absolute risk. [ABSTRACT FROM AUTHOR]- Published
- 2019
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294. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution
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Schwager, Evelyn E., Sharma, Prashant P., Clarke, Thomas, Leite, Daniel J., Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, Lauren, Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D., Chao, Hsu, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G., Funch, Peter, Garb, Jessica, Gonzalez, Luis B., Gonzalez, Vanessa L., Griffiths-Jones, Sam, Han, Yi, Hayashi, Cheryl, Hilbrant, Maarten, Hughes, Daniel S. T., Janssen, Ralf, Lee, Sandra L., Maeso, Ignacio, Murali, Shwetha C., Muzny, Donna M., da Fonseca, Rodrigo Nunes, Paese, Christian L. B., Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schönauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, John H., Wolff, Carsten, Worley, Kim C., Bucher, Gregor, Gibbs, Richard A., Coddington, Jonathan, Oda, Hiroki, Stanke, Mario, Ayoub, Nadia A., Prpic, Nikola-Michael, Flot, Jean-Francois, Posnien, Nico, Richards, Stephen, McGregor, Alistair P., Schwager, Evelyn E., Sharma, Prashant P., Clarke, Thomas, Leite, Daniel J., Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, Lauren, Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D., Chao, Hsu, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G., Funch, Peter, Garb, Jessica, Gonzalez, Luis B., Gonzalez, Vanessa L., Griffiths-Jones, Sam, Han, Yi, Hayashi, Cheryl, Hilbrant, Maarten, Hughes, Daniel S. T., Janssen, Ralf, Lee, Sandra L., Maeso, Ignacio, Murali, Shwetha C., Muzny, Donna M., da Fonseca, Rodrigo Nunes, Paese, Christian L. B., Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schönauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, John H., Wolff, Carsten, Worley, Kim C., Bucher, Gregor, Gibbs, Richard A., Coddington, Jonathan, Oda, Hiroki, Stanke, Mario, Ayoub, Nadia A., Prpic, Nikola-Michael, Flot, Jean-Francois, Posnien, Nico, Richards, Stephen, and McGregor, Alistair P.
- Abstract
Background: The duplication of genes can occur through various mechanisms and is thought to make a major contribution to the evolutionary diversification of organisms. There is increasing evidence for a large-scale duplication of genes in some chelicerate lineages including two rounds of whole genome duplication (WGD) in horseshoe crabs. To investigate this further, we sequenced and analyzed the genome of the common house spider Parasteatoda tepidariorum. Results: We found pervasive duplication of both coding and non-coding genes in this spider, including two clusters of Hox genes. Analysis of synteny conservation across the P. tepidariorum genome suggests that there has been an ancient WGD in spiders. Comparison with the genomes of other chelicerates, including that of the newly sequenced bark scorpion Centruroides sculpturatus, suggests that this event occurred in the common ancestor of spiders and scorpions, and is probably independent of the WGDs in horseshoe crabs. Furthermore, characterization of the sequence and expression of the Hox paralogs in P. tepidariorum suggests that many have been subject to neo-functionalization and/or sub-functionalization since their duplication. Conclusions: Our results reveal that spiders and scorpions are likely the descendants of a polyploid ancestor that lived more than 450 MYA. Given the extensive morphological diversity and ecological adaptations found among these animals, rivaling those of vertebrates, our study of the ancient WGD event in Arachnopulmonata provides a new comparative platform to explore common and divergent evolutionary outcomes of polyploidization events across eukaryotes.
- Published
- 2017
- Full Text
- View/download PDF
295. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution.
- Author
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Schwager, Evelyn E, Schwager, Evelyn E, Sharma, Prashant P, Clarke, Thomas, Leite, Daniel J, Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, Lauren, Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D, Chao, Hsu, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G, Funch, Peter, Garb, Jessica, Gonzalez, Luis B, Gonzalez, Vanessa L, Griffiths-Jones, Sam, Han, Yi, Hayashi, Cheryl, Hilbrant, Maarten, Hughes, Daniel ST, Janssen, Ralf, Lee, Sandra L, Maeso, Ignacio, Murali, Shwetha C, Muzny, Donna M, Nunes da Fonseca, Rodrigo, Paese, Christian LB, Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schönauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, John H, Wolff, Carsten, Worley, Kim C, Bucher, Gregor, Gibbs, Richard A, Coddington, Jonathan, Oda, Hiroki, Stanke, Mario, Ayoub, Nadia A, Prpic, Nikola-Michael, Flot, Jean-François, Posnien, Nico, Richards, Stephen, McGregor, Alistair P, Schwager, Evelyn E, Schwager, Evelyn E, Sharma, Prashant P, Clarke, Thomas, Leite, Daniel J, Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, Lauren, Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D, Chao, Hsu, Dinh, Huyen, Doddapaneni, HarshaVardhan, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G, Funch, Peter, Garb, Jessica, Gonzalez, Luis B, Gonzalez, Vanessa L, Griffiths-Jones, Sam, Han, Yi, Hayashi, Cheryl, Hilbrant, Maarten, Hughes, Daniel ST, Janssen, Ralf, Lee, Sandra L, Maeso, Ignacio, Murali, Shwetha C, Muzny, Donna M, Nunes da Fonseca, Rodrigo, Paese, Christian LB, Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schönauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, John H, Wolff, Carsten, Worley, Kim C, Bucher, Gregor, Gibbs, Richard A, Coddington, Jonathan, Oda, Hiroki, Stanke, Mario, Ayoub, Nadia A, Prpic, Nikola-Michael, Flot, Jean-François, Posnien, Nico, Richards, Stephen, and McGregor, Alistair P
- Abstract
BackgroundThe duplication of genes can occur through various mechanisms and is thought to make a major contribution to the evolutionary diversification of organisms. There is increasing evidence for a large-scale duplication of genes in some chelicerate lineages including two rounds of whole genome duplication (WGD) in horseshoe crabs. To investigate this further, we sequenced and analyzed the genome of the common house spider Parasteatoda tepidariorum.ResultsWe found pervasive duplication of both coding and non-coding genes in this spider, including two clusters of Hox genes. Analysis of synteny conservation across the P. tepidariorum genome suggests that there has been an ancient WGD in spiders. Comparison with the genomes of other chelicerates, including that of the newly sequenced bark scorpion Centruroides sculpturatus, suggests that this event occurred in the common ancestor of spiders and scorpions, and is probably independent of the WGDs in horseshoe crabs. Furthermore, characterization of the sequence and expression of the Hox paralogs in P. tepidariorum suggests that many have been subject to neo-functionalization and/or sub-functionalization since their duplication.ConclusionsOur results reveal that spiders and scorpions are likely the descendants of a polyploid ancestor that lived more than 450 MYA. Given the extensive morphological diversity and ecological adaptations found among these animals, rivaling those of vertebrates, our study of the ancient WGD event in Arachnopulmonata provides a new comparative platform to explore common and divergent evolutionary outcomes of polyploidization events across eukaryotes.
- Published
- 2017
296. Molecular control of gut formation in the spider Parasteatoda tepidariorum
- Author
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Feitosa, Natalia Martins, Pechmann, Matthias, Schwager, Evelyn E., Tobias-Santos, Vitoria, McGregor, Alistair P., Damen, Wim G. M., da Fonseca, Rodrigo Nunes, Feitosa, Natalia Martins, Pechmann, Matthias, Schwager, Evelyn E., Tobias-Santos, Vitoria, McGregor, Alistair P., Damen, Wim G. M., and da Fonseca, Rodrigo Nunes
- Abstract
The development of a digestive system is an essential feature of bilaterians. Studies of the molecular control of gut formation in arthropods have been studied in detail in the fruit fly Drosophila melanogaster. However, little is known in other arthropods, especially in noninsect arthropods. To better understand the evolution of arthropod alimentary system, we investigate the molecular control of gut development in the spider Parasteatoda tepidariorum (Pt), the primary chelicerate model species for developmental studies. Orthologs of the ectodermal genes Pt-wingless (Pt-wg) and Pt-hedgehog (Pt-hh), of the endodermal genes, Pt-serpent (Pt-srp) and Pt-hepatocyte-nuclear factor-4 (Pt-hnf4) and of the mesodermal gene Pt-twist (Pt-twi) are expressed in the same germ layers during spider gut development as in D. melanogaster. Thus, our expression data suggest that the downstream molecular components involved in gut development in arthropods are conserved. However, Pt-forkhead (Pt-fkh) expression and function in spiders is considerably different from its D. melanogaster ortholog. Pt-fkh is expressed before gastrulation in a cell population that gives rise to endodermal and mesodermal precursors, suggesting a possible role for this factor in specification of both germ layers. To test this hypothesis, we knocked down Pt-fkh via RNA interference. Pt-fkh RNAi embryos not only fail to develop a proper gut, but also lack the mesodermal Pt-twi expressing cells. Thus, in spiders Pt-fkh specifies endodermal and mesodermal germ layers. We discuss the implications of these findings for the evolution and development of gut formation in Ecdysozoans.
- Published
- 2017
297. Molecular control of gut formation in the spider Parasteatoda tepidariorum
- Author
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Martins Feitosa, Natália, Pechmann, Matthias, Schwager, Evelyn E., Tobias-Santos, Vitória, McGregor, Alistair P., Damen, Wim G.M., Nunes da Fonseca, Rodrigo, Martins Feitosa, Natália, Pechmann, Matthias, Schwager, Evelyn E., Tobias-Santos, Vitória, McGregor, Alistair P., Damen, Wim G.M., and Nunes da Fonseca, Rodrigo
- Abstract
The development of a digestive system is an essential feature of bilaterians. Studies of the molecular control of gut formation in arthropods have been studied in detail in the fruit fly Drosophila melanogaster. However, little is known in other arthropods, especially in noninsect arthropods. To better understand the evolution of arthropod alimentary system, we investigate the molecular control of gut development in the spider Parasteatoda tepidariorum (Pt), the primary chelicerate model species for developmental studies. Orthologs of the ectodermal genes Pt-wingless (Pt-wg) and Pt-hedgehog (Pt-hh), of the endodermal genes, Pt-serpent (Pt-srp) and Pt-hepatocyte-nuclear factor-4 (Pt-hnf4) and of the mesodermal gene Pt-twist (Pt-twi) are expressed in the same germ layers during spider gut development as in D. melanogaster. Thus, our expression data suggest that the downstream molecular components involved in gut development in arthropods are conserved. However, Pt-forkhead (Pt-fkh) expression and function in spiders is considerably different from its D. melanogaster ortholog. Pt-fkh is expressed before gastrulation in a cell population that gives rise to endodermal and mesodermal precursors, suggesting a possible role for this factor in specification of both germ layers. To test this hypothesis, we knocked down Pt-fkh via RNA interference. Pt-fkh RNAi embryos not only fail to develop a proper gut, but also lack the mesodermal Pt-twi expressing cells. Thus, in spiders Pt-fkh specifies endodermal and mesodermal germ layers. We discuss the implications of these findings for the evolution and development of gut formation in Ecdysozoans.
- Published
- 2017
298. The house spider genome reveals an ancient whole-genome duplication during arachnid evolution
- Author
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Schwager, Evelyn, Sharma, P., Clarke, Thomas, Leite, Daniel C, Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, L., Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D., Chao, Hsu, Dinh, Huyen, Vardhan Doddapaneni, Harsha, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G., Funch, Peter, Garb, Jessica, Gonzalez, Vanessa L., Griffiths-Jones, Sam, Han, Yi, Hayakawa, Cheryl, Hilbrant, Maarten, Hughes, Daniel, Janssen, Ralf, Lee, Sandra, Maeso, Ignacio, Murali, Shwetha, Muzny, Donna, Nunes da Fonseca, Rodrigo, Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schoenauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, Jack, Wolff, Carsten, Worley, Kim, Bucher, Gregor, Gibbs, Richard, Coddington, Jonathan, Hiroki, Oda, Stanke, Mario, Ayoub, Nadia, Prpic, Nikola-Michael, Flot, Jean-François, Posnien, Nico, Richards, Stephen, McGregor, Alistair, Schwager, Evelyn, Sharma, P., Clarke, Thomas, Leite, Daniel C, Wierschin, Torsten, Pechmann, Matthias, Akiyama-Oda, Yasuko, Esposito, L., Bechsgaard, Jesper, Bilde, Trine, Buffry, Alexandra D., Chao, Hsu, Dinh, Huyen, Vardhan Doddapaneni, Harsha, Dugan, Shannon, Eibner, Cornelius, Extavour, Cassandra G., Funch, Peter, Garb, Jessica, Gonzalez, Vanessa L., Griffiths-Jones, Sam, Han, Yi, Hayakawa, Cheryl, Hilbrant, Maarten, Hughes, Daniel, Janssen, Ralf, Lee, Sandra, Maeso, Ignacio, Murali, Shwetha, Muzny, Donna, Nunes da Fonseca, Rodrigo, Qu, Jiaxin, Ronshaugen, Matthew, Schomburg, Christoph, Schoenauer, Anna, Stollewerk, Angelika, Torres-Oliva, Montserrat, Turetzek, Natascha, Vanthournout, Bram, Werren, Jack, Wolff, Carsten, Worley, Kim, Bucher, Gregor, Gibbs, Richard, Coddington, Jonathan, Hiroki, Oda, Stanke, Mario, Ayoub, Nadia, Prpic, Nikola-Michael, Flot, Jean-François, Posnien, Nico, Richards, Stephen, and McGregor, Alistair
- Abstract
The duplication of genes can occur through various mechanisms and is thought to make a major contribution to the evolutionary diversification of organisms. There is increasing evidence for a large-scale duplication of genes in some chelicerate lineages including two rounds of whole genome duplication (WGD) in horseshoe crabs. To investigate this further we sequenced and analyzed the genome of the common house spider Parasteatoda tepidariorum. We found pervasive duplication of both coding and non-coding genes in this spider, including two clusters of Hox genes. Analysis of synteny conservation across the P. tepidariorum genome suggests that there has been an ancient WGD in spiders. Comparison with the genomes of other chelicerates, including that of the newly sequenced bark scorpion Centruroides sculpturatus, suggests that this event occurred in the common ancestor of spiders and scorpions and is probably independent of the WGDs in horseshoe crabs. Furthermore, characterization of the sequence and expression of the Hox paralogs in P. tepidariorum suggests that many have been subject to neofunctionalization and subfunctionalization since their duplication, and therefore may have contributed to the diversification of spiders and other pulmonate arachnids., SCOPUS: ar.j, info:eu-repo/semantics/published
- Published
- 2017
299. A conserved maternal-specific repressive domain in Zelda revealed by Cas9-mediated mutagenesis in Drosophila melanogaster
- Author
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Nunes da Fonseca, Rodrigo and Venancio, Thiago M.
- Subjects
0301 basic medicine ,Cancer Research ,RNA Stability ,Gene Expression ,Biochemistry ,Transcription (biology) ,Invertebrate Genomics ,Drosophila Proteins ,Promoter Regions, Genetic ,Conserved Sequence ,Genetics (clinical) ,Gene Editing ,Genetics ,Insertion Mutation ,Zygote ,biology ,Drosophila Melanogaster ,Messenger RNA ,Eukaryota ,Gene Expression Regulation, Developmental ,Nuclear Proteins ,Zinc Fingers ,Animal Models ,Genomics ,Insects ,Nucleic acids ,Experimental Organism Systems ,Perspective ,Drosophila ,Maternal Inheritance ,lcsh:QH426-470 ,Arthropoda ,Research and Analysis Methods ,03 medical and health sciences ,Model Organisms ,Protein Domains ,DNA-binding proteins ,Animals ,Point Mutation ,Gene Regulation ,RNA, Messenger ,Molecular Biology ,Transcription factor ,Ecology, Evolution, Behavior and Systematics ,Organisms ,Biology and Life Sciences ,Proteins ,biology.organism_classification ,Invertebrates ,Regulatory Proteins ,lcsh:Genetics ,030104 developmental biology ,Animal Genomics ,Mutation ,RNA ,Pancrustacea ,CRISPR-Cas Systems ,Transcription Factors - Abstract
In nearly all metazoans, the earliest stages of development are controlled by maternally deposited mRNAs and proteins. The zygotic genome becomes transcriptionally active hours after fertilization. Transcriptional activation during this maternal-to-zygotic transition (MZT) is tightly coordinated with the degradation of maternally provided mRNAs. In Drosophila melanogaster, the transcription factor Zelda plays an essential role in widespread activation of the zygotic genome. While Zelda expression is required both maternally and zygotically, the mechanisms by which it functions to remodel the embryonic genome and prepare the embryo for development remain unclear. Using Cas9-mediated genome editing to generate targeted mutations in the endogenous zelda locus, we determined the functional relevance of protein domains conserved amongst Zelda orthologs. We showed that neither a conserved N-terminal zinc finger nor an acidic patch were required for activity. Similarly, a previously identified splice isoform of zelda is dispensable for viability. By contrast, we identified a highly conserved zinc-finger domain that is essential for the maternal, but not zygotic functions of Zelda. Animals homozygous for mutations in this domain survived to adulthood, but embryos inheriting these loss-of-function alleles from their mothers died late in embryogenesis. These mutations did not interfere with the capacity of Zelda to activate transcription in cell culture. Unexpectedly, these mutations generated a hyperactive form of the protein and enhanced Zelda-dependent gene expression. These data have defined a protein domain critical for controlling Zelda activity during the MZT, but dispensable for its roles later in development, for the first time separating the maternal and zygotic requirements for Zelda. This demonstrates that highly regulated levels of Zelda activity are required for establishing the developmental program during the MZT. We propose that tightly regulated gene expression is essential to navigate the MZT and that failure to precisely execute this developmental program leads to embryonic lethality.
- Published
- 2018
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300. Genome of Rhodnius prolixus, an insect vector of Chagas disease, reveals unique adaptations to hematophagy and parasite infection
- Author
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Mesquita, Rafael D., Vionette-Amaral, Raquel J., Lowenberger, Carl, Rivera-Pomar, Rolando, Monteiro, Fernando A., Minx, Patrick, Spieth, John, Bernardo Carvalho, A., Panzera, Francisco, Lawson, Daniel, Torres, Andre Q., Ribeiro, Jose M. C., Sorgine, Marcos H. F., Waterhouse, Robert M., Montague, Michael J., Abad-Franch, Fernando, Alves-Bezerra, Michele, Amaral, Laurence R., Araujo, Helena M., Araujo, Ricardo N., Aravind, L., Atella, Georgia C., Azambuja, Patricia, Berni, Mateus, Bittencourt-Cunha, Paula R., Braz, Gloria R. C., Calderon-Fernandez, Gustavo, Carareto, Claudia M. A., Christensen, Mikkel B., Costa, Igor R., Costa, Samara G., Dansa, Marilvia, Daumas-Filho, Carlos R. O., De-Paula, Iron F., Dias, Felipe A., Dimopoulos, George, Emrich, Scott J., Esponda-Behrens, Natalia, Fampa, Patricia, Fernandez-Medina, Rita D., Da Fonseca, Rodrigo N., Marcio Pavan, Fronick, Catrina, Fulton, Lucinda A., Gandara, Ana Caroline, Garcia, Eloi S., Genta, Fernando A., Giraldo-Calderon, Gloria I., Gomes, Bruno, Gondim, Katia C., Granzotto, Adriana, Guarneri, Alessandra A., Guigo, Roderic, Harry, Myriam, Hughes, Daniel S. T., Jablonka, Willy, Jacquin-Joly, Emmanuelle, Patricia Juarez, M., Koerich, Leonardo B., Latorre-Estivalis, Jose Manuel, Lavore, Andres, Lawrence, Gena G., Lazoski, Cristiano, Lazzari, Claudio R., Lopes, Raphael R., Lorenzo, Marcelo G., Lugon, Magda D., Majerowicz, David, Marcet, Paula L., Mariotti, Marco, Masuda, Hatisaburo, Megy, Karine, Melo, Ana C. A., Missirlis, Fanis, Mota, Theo, Noriega, Fernando G., Nouzova, Marcela, Nunes, Rodrigo D., Oliveira, Raquel L. L., Oliveira-Silveira, Gilbert, Ons, Sheila, Pagola, Lucia, Paiva-Silva, Gabriela O., Pascual, Agustina, Pavan, Marcio G., Pedrini, Nicolas, Peixoto, Alexandre A., Pereira, Marcos H., Pike, Andrew, Polycarpo, Carla, Prosdocimi, Francisco, Ribeiro-Rodrigues, Rodrigo, Robertson, Hugh M., Salerno, Ana Paula, Salmon, Didier, Santesmasses, Didac, Schama, Renata, Seabra-Junior, Eloy S., Silva-Cardoso, Livia, Silva-Neto, Mario A. C., Souza-Gomes, Matheus, Sterkel, Marcos, Taracena, Mabel L., Tojo, Marta, Tu, Zhijian Jake, Tubio, Jose M. C., Ursic-Bedoya, Raul, Venancio, Thiago M., Walter-Nuno, Ana Beatriz, Wilson, Derek, Warren, Wesley C., Wilson, Richard K., Huebner, Erwin, Dotson, Ellen M., and Oliveira, Pedro L.
- Subjects
Chagas disease ,Base Sequence ,Gene Transfer, Horizontal ,Rhodnius ,Trypanosoma cruzi ,Molecular Sequence Data ,Animals ,Humans ,Adaptation, Physiological ,Rhodnius prolixus ,Wolbachia ,Host-Parasite Interactions ,Insect Vectors - Abstract
Rhodnius prolixus not only has served as a model organism for the study of insect physiology, but also is a major vector of Chagas disease, an illness that affects approximately seven million people worldwide. We sequenced the genome of R. prolixus, generated assembled sequences covering 95% of the genome ( approximately 702 Mb), including 15,456 putative protein-coding genes, and completed comprehensive genomic analyses of this obligate blood-feeding insect. Although immune-deficiency (IMD)-mediated immune responses were observed, R. prolixus putatively lacks key components of the IMD pathway, suggesting a reorganization of the canonical immune signaling network. Although both Toll and IMD effectors controlled intestinal microbiota, neither affected Trypanosoma cruzi, the causal agent of Chagas disease, implying the existence of evasion or tolerance mechanisms. R. prolixus has experienced an extensive loss of selenoprotein genes, with its repertoire reduced to only two proteins, one of which is a selenocysteine-based glutathione peroxidase, the first found in insects. The genome contained actively transcribed, horizontally transferred genes from Wolbachia sp., which showed evidence of codon use evolution toward the insect use pattern. Comparative protein analyses revealed many lineage-specific expansions and putative gene absences in R. prolixus, including tandem expansions of genes related to chemoreception, feeding, and digestion that possibly contributed to the evolution of a blood-feeding lifestyle. The genome assembly and these associated analyses provide critical information on the physiology and evolution of this important vector species and should be instrumental for the development of innovative disease control methods.
- Published
- 2015
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