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A response to a letter to the editor about the article "Ivory-billed woodpecker (Campephilus principalis) persists in continental North America," by D. A. Sibley and colleagues in the March 17, 2006 issue is presented.

Documenting patterns of spatiotemporal change in hyper‐diverse communities remains a challenge for tropical ecology yet is increasingly urgent as some long‐term studies have shown major declines in bird communities in undisturbed sites. In 1982, Terborgh et al. quantified the structure and organisation of the bird community in a 97‐ha. plot in southeastern Peru. We revisited the same plot in 2018 using the same methodologies as the original study to evaluate community‐wide changes. Contrary to longitudinal studies of other neotropical bird communities (Tiputini, Manaus, and Panama), we found little change in community structure and organisation, with increases in 5, decreases in 2 and no change in 7 foraging guilds. This apparent stability suggests that large forest reserves such as the Manu National Park, possibly due to regional topographical influences on precipitation, still provide the conditions for establishing refugia from at least some of the effects of global change on bird communities. [ABSTRACT FROM AUTHOR]

A response by John W. Fitzpatrick and Glen E. Woolfenden to a letter to the editor about their article on breeding birds in the February 1978 issue is presented.

Understanding the genomic consequences of population decline is important for predicting species' vulnerability to intensifying global change. Empirical information about genomic changes in populations in the early stages of decline, especially for those still experiencing immigration, remains scarce. We used 7834 autosomal SNPs and demographic data for 288 Florida scrub jays (Aphelocoma coerulescens; FSJ) sampled in 2000 and 2008 to compare levels of genetic diversity, inbreeding, relatedness, and lengths of runs of homozygosity (ROH) between two subpopulations within dispersal distance of one another but have experienced contrasting demographic trajectories. At Archbold Biological Station (ABS), the FSJ population has been stable because of consistent habitat protection and management, while at nearby Placid Lakes Estates (PLE), the population declined precipitously due to suburban development. By the onset of our sampling in 2000, birds in PLE were already less heterozygous, more inbred, and on average more related than birds in ABS. No significant changes occurred in heterozygosity or inbreeding across the 8‐year sampling interval, but average relatedness among individuals decreased in PLE, thus by 2008 average relatedness did not differ between sites. PLE harbored a similar proportion of short ROH but a greater proportion of long ROH than ABS, suggesting one continuous population of shared demographic history in the past, which is now experiencing more recent inbreeding. These results broadly uphold the predictions of simple population genetic models based on inferred effective population sizes and rates of immigration. Our study highlights how, in just a few generations, formerly continuous populations can diverge in heterozygosity and levels of inbreeding with severe local population decline despite ongoing gene flow. [ABSTRACT FROM AUTHOR]

Variation in ecological and demographic characteristics may alter the value of extrapair paternity (EPP) for socially monogamous species, thereby leading to variation in mating strategies among conspecific populations. Environmental factors influencing the need for parental care, and demographic factors influencing relatedness of social pairs or availability of unrelated extrapair partners, are both predicted to influence the direct and indirect benefits of EPP in cooperatively breeding birds. We examined genetic mating strategies in 3 long-term study populations of cooperatively breeding Florida scrub-jays (FSJs; Aphelocoma coerulescens) in which the value of EPP—or opportunities for it—was likely to vary: a fragmented site with a high frequency of inbreeding (potentially elevating the value of EPP as a means of increasing offspring heterozygosity); a suburban population with high rates of brood reduction (potentially elevating the value of shared parental investment); and a wildland site with a high frequency of unrelated breeders and opposite-sex auxiliaries (potentially elevating the opportunity for shared within-group parentage). Despite these differences, genetic monogamy dominated at all sites: 100% of the offspring sampled from the suburban site (144 offspring) and fragmented site (258 offspring), and 99.5% of offspring from the wildland site (367 of 369 offspring) were produced monogamously. Rare exceptions in our study populations demonstrate that, even in the FSJ, genetic monogamy is a plastic trait. The near ubiquity of genetic monogamy across 3 ecologically different study sites, however, suggests that this tendency toward monogamy is impervious to the population-level environmental and social variation that we documented. [ABSTRACT FROM PUBLISHER]

1. Using data on breeding birds from a 35-year study of Florida scrub-jays Aphelocoma coerulescens (Bosc 1795), we show that survival probabilities are structured by age, birth cohort, and maternal family, but not by sex. Using both accelerated failure time (AFT) and Cox proportional hazard models, the data are best described by models incorporating variation among birth cohorts and greater mortality hazard with increasing age. AFT models using Weibull distributions with the shape parameter > 1 were always the best-fitting models. 2. Shared frailty models allowing for family structure greatly reduce model deviance. The best-fitting models included a term for frailty shared by maternal families. 3. To ask how long a data set must be to reach qualitatively the same conclusions, we repeated the analyses for all possible truncated data sets of 2 years in length or greater. Length of the data set affects the parameter estimates, but not the qualitative conclusions. In all but three of 337 truncated data sets the best-fitting models pointed to same conclusions as the full data set. Shared frailty models appear to be quite robust. 4. The data are not adequate for testing hypotheses as to whether variation in frailty is heritable. 5. Substantial structured heterogeneity for survival exists in this population. Such structured heterogeneity has been shown to have substantial effects in reducing demographic stochasticity. [ABSTRACT FROM AUTHOR]

In disturbance-prone ecosystems, fitness consequences of plant reproductive strategies are often determined by the relative timing of seed production and disturbance events, but the role of disturbances as proximate drivers of seed production has been overlooked. We use long-term data on seed production in Quercus chapmanii, Q. geminata and Q. inopina, rhizomatous oaks found in south central Florida's oak scrub, to investigate the role of fire history and its interaction with weather in shaping acorn production and its synchrony. Acorn production increased with the time since last fire, combined with additive or interactive effects of spring precipitation (+) or drought (–). Furthermore, multiple matrix regression models revealed that ramet pairs with shared fire history were more synchronous in seed production than ones that burned in different years. Long-term trends suggest that increasingly drier spring weather, in interaction with fire frequency, may drive a decline of seed production. Such declines could affect the community of acorn-reliant vertebrates in the Florida scrub, including endangered Florida scrub-jays (Aphelocoma coerulescens). These results illustrate that fire can function as a proximate driver of seed production in mast-seeding species, highlighting the increasingly recognized importance of interactions among reproductive strategies and disturbance regimes in structuring plant populations and communities. This article is part of the theme issue 'The ecology and evolution of synchronized seed production in plants'. [ABSTRACT FROM AUTHOR]

Accurate maps of species ranges are essential to inform conservation, but time-consuming to produce and update. Given the pace of change of knowledge about species distributions and shifts in ranges under climate change and land use, a need exists for timely mapping approaches that enable batch processing employing widely available data. We develop a systematic approach of batch-processing range maps and derived Area of Habitat maps for terrestrial bird species with published ranges below 125,000 km2 in Central and South America. (Area of Habitat is the habitat available to a species within its range.) We combine existing range maps with the rapidly expanding crowd-sourced eBird data of presences and absences from frequently surveyed locations, plus readily accessible, high resolution satellite data on forest cover and elevation to map the Area of Habitat available to each species. Users can interrogate the maps produced to see details of the observations that contributed to the ranges. Previous estimates of Areas of Habitat were constrained within the published ranges and thus were, by definition, smaller—typically about 30%. This reflects how little habitat within suitable elevation ranges exists within the published ranges. Our results show that on average, Areas of Habitat are 12% larger than published ranges, reflecting the often-considerable extent that eBird records expand the known distributions of species. Interestingly, there are substantial differences between threatened and non-threatened species. Some 40% of Critically Endangered, 43% of Endangered, and 55% of Vulnerable species have Areas of Habitat larger than their published ranges, compared with 31% for Near Threatened and Least Concern species. The important finding for conservation is that threatened species are generally more widespread than previously estimated. [ABSTRACT FROM AUTHOR]

This document is a correction notice for an article published in PLOS ONE. The correction states that the authors of the article did not cite a preprint of a similar article published by Palacio et al. in Diversity and Distributions. Both articles address similar research questions and use different methods to build species distribution maps. The PLOS ONE study included more details and discussion of limitations compared to the Diversity and Distributions study. The authors of the correction notice are listed at the end. [Extracted from the article]