268 results on '"Aikichi Iwamoto"'
Search Results
252. T cell function and expression are dramatically altered in T cell receptor Vγ1.1Jγ4Cγ4 transgenic mice
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Wayne M. Yokoyama, Richard G. Miller, Aikichi Iwamoto, David A. Ferrick, Tak W. Mak, Wolfgang Ballhausen, Christina L. Walker, Hanspeter Pircher, and Suryaprakash R. Sambhara
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Genetically modified mouse ,medicine.anatomical_structure ,Cell culture ,Transgene ,T cell ,Gene expression ,T-cell receptor ,medicine ,Endogeny ,T lymphocyte ,Biology ,Molecular biology ,General Biochemistry, Genetics and Molecular Biology - Abstract
We have characterized transgenic mice carrying a functional T cell receptor (TCR) Cγ4 (Vγ1.1Jγ4Cγ4) gene. Results indicate that active transcription of the Cγ4 transgene can influence expression of the endogenous Cγ4, Cγ1 (Vγ3-, Vγ4-, Vγ2-, or Vγ5Jγ1Cγ1) and Cγ2 (Vγ1.2Jγ2Cγ2) genes, while the ultimate expression of other TCR δ, α, and β chain genes, as well as the adult T cell response, are relatively unaltered. Cells expressing transgenic Cγ4 and endogenous δ TCR transcripts can migrate to the skin as dendritic epithelial cells (DEC) even though Cγ4 cells are rarely, if at all, found in the skin. Transgenic and control mice were compared at 2 weeks, 6–7 weeks, and older. At 2 weeks, the thymus of transgenic mice, particularly the medulla, was much larger than control. Moreover, peripheral lymphoid tissues of younger mice were markedly (as much as 100-fold) more immunoreactive (both Con A response and alloreactivity). These differences, although persistent, became smaller in older mice. The data suggest that transgene expression has a major effect on T cell development and reactivity.
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- 1989
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253. Alterations of polypeptide composition of mature granulocytes obtained from patients with chronic myelogenous leukemia
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Kazuhiro Morishita, Hiroshi Yoshikura, Sachiko Teshima, Shigetaka Asano, Shiro Miwa, Jun Yokota, and Aikichi Iwamoto
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Gel electrophoresis ,Pathology ,medicine.medical_specialty ,Spots ,Immunology ,Polypeptide composition ,Cell Biology ,Hematology ,Biology ,medicine.disease ,Biochemistry ,Leukemia, Myeloid ,hemic and lymphatic diseases ,Healthy volunteers ,medicine ,Humans ,Electrophoresis, Polyacrylamide Gel ,Isoelectric Focusing ,Peptides ,Whole cell ,neoplasms ,Granulocytes ,Chronic myelogenous leukemia - Abstract
In order to compare the polypeptide composition of the CML mature granulocytes with that of the normal whole cell lysates, mature granulocytes from four healthy volunteers and six CML patients were analyzed by two-dimensional gel electrophoresis. In the normal subjects, 60 major spots were commonly and reproducibly identified. In the CML, there were constant alterations in some of these major spots. Four spots were totally absent in all the CML samples, and another four spots were absent in five of the six samples. In addition, one spot was larger in CML than in normal cells, and another spot, which was only faintly visible or not detectable in the normal samples, was massively present in all the CML samples. Our data suggest specific changes in the polypeptide compositions of CML granulocytes. This method could be clinically applied for the analysis of granulocytic disorders.
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- 1982
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254. Alteration of polypeptide synthesis and composition during differentiation of human leukemia cell line HL60
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Shiro Miwa, Jun Yokota, Aikichi Iwamoto, Shigetaka Asano, and Hiroshi Yoshikura
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Peptide Biosynthesis ,Cancer Research ,Myeloid ,HL60 ,Biology ,Cell Line ,chemistry.chemical_compound ,Mole ,medicine ,Humans ,Dimethyl Sulfoxide ,Gel electrophoresis ,Two-dimensional gel electrophoresis ,integumentary system ,Monocyte ,Myeloid leukemia ,Cell Differentiation ,Hematology ,Molecular biology ,medicine.anatomical_structure ,Oncology ,chemistry ,Biochemistry ,Leukemia, Myeloid ,Cell culture ,Peptides - Abstract
Using two-dimensional gel electrophoresis, we have analyzed the polypeptide alteration of the human myeloid leukemia cell line HL60 during differentiation induced by dimethylsulfoxide (DMSO) and 12- O -tetradecanoylphorbol-13-acetate (TPA). Three polypeptides increased in synthesis after DMSO treatment, while 5 polypeptides increased after TPA treatment. Most other polypeptides were synthesized at a reduced rate though their net amounts remained unchanged, indicating that myeloid differentiation was associated not only with an increased synthesis of a few specific polypeptides but also with overall depression of most other polypeptides. One of the early differentiation marker proteins (mol. wt approx. 20,000, pl approx. 6.0) of granulopoietic cells was increased specifically after DMSO treatment, while one of the monocyte specific marker proteins (mol. wt approx. 46,000, pl approx. 4.8) was detected after TPA treatment. But, the pattern of HL60 cells did not necessarily become similar to that of normal mature granulocytes after DMSO treatment, indicating that HL60 cell differentiation might be partial or incomplete.
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- 1984
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255. Generation of Rejuvenated Antigen-Specific T Cells by Reprogramming to Pluripotency and Redifferentiation
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Takafumi Shimizu, Naoya Takayama, Yoko Tajima, Toshinobu Nishimura, Daisuke Yamada, Yasushi Uemura, Manami Ohtaka, Haruo Goto, Mahito Nakanishi, Koji Eto, Hiromitsu Nakauchi, Aikichi Iwamoto, Kaori Nakayama-Hosoya, Satoshi Takahashi, Shin Kaneko, Ai Kawana-Tachikawa, Dayong Zhu, Ken Nishimura, Shoichi Iriguchi, Haruhiko Koseki, and Nobukazu Watanabe
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T-cell receptor ,Cancer ,Cell Biology ,Biology ,medicine.disease ,Telomere ,Cell biology ,Antigen ,Antigen specific ,Immunology ,Genetics ,medicine ,Molecular Medicine ,Induced pluripotent stem cell ,Reprogramming ,CD8 - Abstract
SUMMARY Adoptive immunotherapy with functional T cells is potentially an effective therapeutic strategy for combating many types of cancer and viral infection. However, exhaustion of antigen-specific T cells represents a major challenge to this type of approach. In an effort to overcome this problem, we reprogrammed clonally expanded antigen-specific CD8 + T cells from an HIV-1-infected patient to pluripotency. The T cell-derived induced pluripotent stem cells were then redifferentiated into CD8 + T cells that had a high proliferative capacity and elongated telomeres. These ‘‘rejuvenated’’ cells possessed antigen-specific killing activity and exhibited T cell receptor gene-rearrangement patterns identical to those of the original T cell clone from the patient. We also found that this method can be effective for generating specific T cells for other pathology-associated antigens. Thus, this type of approach may have broad applications in the field of adoptive immunotherapy.
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256. Bat Origins of MERS-CoV Supported by Bat Coronavirus HKU4 Usage of Human Receptor CD26
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Ying Wu, Jinghua Yan, Kwok-Yung Yuen, Qihui Wang, Yifang Xuan, Aikichi Iwamoto, Jianwei Wang, Patrick C. Y. Woo, Yan Li, Yuan Yuan, Guangwen Lu, Wei Ji, Pengcheng Han, Jianxun Qi, George F. Gao, and Yuhua Wan
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Cancer Research ,Virus genetics ,Middle East respiratory syndrome coronavirus ,Dipeptidyl Peptidase 4 ,viruses ,Molecular Sequence Data ,Sequence alignment ,Plasma protein binding ,Biology ,medicine.disease_cause ,Microbiology ,Article ,Viral entry ,Chiroptera ,Immunology and Microbiology(all) ,Virology ,medicine ,Animals ,Humans ,Amino Acid Sequence ,Receptor ,Molecular Biology ,Peptide sequence ,Phylogeny ,Coronavirus ,Spike Glycoprotein, Coronavirus ,Middle East Respiratory Syndrome Coronavirus ,Receptors, Virus ,Parasitology ,Coronavirus Infections ,Sequence Alignment ,Protein Binding - Abstract
Summary The recently reported Middle East respiratory syndrome coronavirus (MERS-CoV) is phylogenetically closely related to the bat coronaviruses (BatCoVs) HKU4 and HKU5. However, the evolutionary pathway of MERS-CoV is still unclear. A receptor binding domain (RBD) in the MERS-CoV envelope-embedded spike protein specifically engages human CD26 (hCD26) to initiate viral entry. The high sequence identity in the viral spike protein prompted us to investigate if HKU4 and HKU5 can recognize hCD26 for cell entry. We found that HKU4-RBD, but not HKU5-RBD, binds to hCD26, and pseudotyped viruses embedding HKU4 spike can infect cells via hCD26 recognition. The structure of the HKU4-RBD/hCD26 complex revealed a hCD26-binding mode similar overall to that observed for MERS-RBD. HKU4-RBD, however, is less adapted to hCD26 than MERS-RBD, explaining its lower affinity for receptor binding. Our findings support a bat origin for MERS-CoV and indicate the need for surveillance of HKU4-related viruses in bats., Graphical Abstract, Highlights • The bat coronavirus HKU4 is phylogenetically closely related to MERS-CoV • The BatCoV HKU4, but not HUK5, spike protein binds to the MERS-CoV human receptor hCD26 • Virus particles pseudotyped with BatCoV HKU4 spike infect cells by engaging hCD26 • HKU4-RBD/hCD26 structure delineates the recognition basis and interaction details, Bat origin has been suggested for the recently identified MERS coronavirus (CoV). Wang et al. provide structural and functional evidence that bat coronavirus HKU4 can utilize the MERS-CoV human receptor CD26 for cell entry. These studies support the possible adaptation of HKU4 coronavirus to infect humans and the need for continued surveillance.
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257. Nationwide surveillance of bacterial pathogens from patients with acute uncomplicated cystitis conducted by the Japanese surveillance committee during 2009 and 2010: antimicrobial susceptibility of Escherichia coli and Staphylococcus saprophyticus
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Satoshi Uno, Yasuhiko Oka, Kazushi Tanaka, Yukihiro Kawano, Hiroshi Hayami, Takashi Yamane, Shinya Uehara, Junko Sato, Toru Sumii, Koichi Takahashi, Hisato Inatomi, Tetsuji Uemura, Masato Fujisawa, Shin Egawa, Shingo Yamamoto, Hiromi Kawano, Kiyohito Ishikawa, Akira Fujii, Aikichi Iwamoto, Kikuo Akiyama, Satoshi Ishihara, Hirofumi Chokyu, Kengo Tsuneyoshi, Satoshi Takahashi, Koh Takeyama, Jun-ichi Kadota, Shinichi Minamitani, Shinji Matsushita, Kazuo Takayama, Hideaki Hanaki, Shuichi Kawai, Kyoichi Totsuka, Keisuke Sunakawa, Shinichi Kaji, Takashi Sato, Shigeru Fujihiro, Toshihiro Ikuyama, Akio Matsubara, Masanobu Izumitani, Ryoichi Hamasuna, Shohei Nishi, Katsuhisa Endo, Motonori Kano, Koichi Monden, Akira Watanabe, Tetsuro Matsumoto, Takahiro Kimura, Hideari Ihara, Seiji Naito, Masaru Yoshioka, Takaoki Hirose, Takamine Yamauchi, Soichi Arakawa, Kenji Ito, Hiroshi Kiyota, Shin Ito, Taiji Tsukamoto, Katsunori Tatsugami, Harunori Narita, Mototsugu Kanokogi, Kanao Kobayashi, Takahide Hosobe, Hiromi Kumon, Mitsuru Yasuda, Takamasa Yamaguchi, and Hirofumi Nishimura
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Microbiology (medical) ,Adult ,Male ,Bacilli ,Adolescent ,medicine.drug_class ,Klebsiella pneumoniae ,Cephalosporin ,Resistance ,Microbial Sensitivity Tests ,medicine.disease_cause ,Enterococcus faecalis ,Microbiology ,Japan ,Cystitis ,medicine ,Escherichia coli ,Humans ,Pharmacology (medical) ,Public Health Surveillance ,Acute uncomplicated cystitis ,Aged ,Aged, 80 and over ,Staphylococcus saprophyticus ,Surveillance ,biology ,business.industry ,Bacterial Infections ,Middle Aged ,Antimicrobial ,biology.organism_classification ,Anti-Bacterial Agents ,Infectious Diseases ,Susceptibility ,Female ,business ,Bacteria - Abstract
The Japanese surveillance committee conducted the first nationwide surveillance of antimicrobial susceptibility patterns of uropathogens responsible for female acute uncomplicated cystitis at 43 hospitals throughout Japan from April 2009 to November 2010. In this study, the causative bacteria (Escherichia coli and Staphylococcus saprophyticus) and their susceptibility to various antimicrobial agents were investigated by isolation and culturing of bacteria from urine samples. In total, 387 strains were isolated from 461 patients, including E. coli (n = 301, 77.8 %), S. saprophyticus (n = 20, 5.2 %), Klebsiella pneumoniae (n = 13, 3.4 %), and Enterococcus faecalis (n = 11, 2.8 %). S. saprophyticus was significantly more common in premenopausal women (P = 0.00095). The minimum inhibitory concentrations of 19 antibacterial agents used for these strains were determined according to the Clinical and Laboratory Standards Institute manual. At least 87 % of E. coli isolates showed susceptibility to fluoroquinolones and cephalosporins, and 100 % of S. saprophyticus isolates showed susceptibility to fluoroquinolones and aminoglycosides. The proportions of fluoroquinolone-resistant E. coli strains and extended-spectrum β-lactamase (ESBL)-producing E. coli strains were 13.3 % and 4.7 %, respectively. It is important to confirm the susceptibility of causative bacteria for optimal antimicrobial therapy, and empiric antimicrobial agents should be selected by considering patient characteristics and other factors. However, the number of isolates of fluoroquinolone-resistant or ESBL-producing strains in gram-negative bacilli may be increasing in patients with urinary tract infections (UTIs) in Japan. Therefore, these data present important information for the proper treatment of UTIs and will serve as a useful reference for future surveillance studies.
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258. Questionnaire-based analysis of mefloquine chemoprophylaxis for malaria in a Japanese population.
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Takeshi Matsumura, Takeshi Fujii, Toshiyuki Miura, Tomohiko Koibuchi, Tokiomi Endo, Hitomi Nakamura, Takashi Odawara, Aikichi Iwamoto, and Tetsuya Nakamura
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Although mefloquine is the only drug licensed for malaria chemoprophylaxis in Japan, there have been few reports describing the effects of and adverse events in the prophylactic usage of mefloquine in a Japanese population. We therefore performed a questionnaire-based study in 21 travelers who were prescribed mefloquine for malaria chemoprophylaxis between October 2001 and December 2003. The study revealed that only 8 out of 21 (38.1%) of the travelers could complete the prophylaxis schedules. Another 8 travelers (38.1%) with incomplete adherence stated that they did not take mefloquine because of either actually experienced or anticipated adverse events. Twelve of the 16 travelers (75.0%) who took mefloquine complained of at least one adverse event probably related to mefloquine. As an overall impression about mefloquine chemoprophylaxis, 14 of the 21 travelers stated that they would take mefloquine again for the next travel to malaria-endemic areas, although 5 of them were concerned about adverse events. These results suggest that, although mefloquine is an indispensable drug for malaria prevention, other effective and well-tolerated chemoprophylactic antimalarials should be available for Japanese travelers who do not tolerate mefloquine. [ABSTRACT FROM AUTHOR]
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- 2005
259. Acute disseminated encephalomyelitis following Plasmodium vivax malaria.
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Tomohiko Koibuchi, Tetsuya Nakamura, Toshiyuki Miura, Tokiomi Endo, Hitomi Nakamura, Takashi Takahashi, Hye-Sook Kim, Yusuke Wataya, Kazushige Washizaki, Kouki Yoshikawa, and Aikichi Iwamoto
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A 24-year-old Japanese man showed neurological disturbances 2 weeks after complete recovery from Plasmodium vivax infection. Magnetic resonance (MR) images of the brain showed multiple high-intensity spotty lesions in the left cerebral cortex and subcortex. Cerebrospinal fluid examination, including polymerase chain reaction analysis for viruses, revealed no sign of active infection. Repeated blood smears were negative for malaria. We diagnosed acute disseminated encephalomyelitis (ADEM) following Plasmodium vivax malaria from the clinical course and MR images. ADEM should be regarded as one of the neurological complications after malarial infection. [ABSTRACT FROM AUTHOR]
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- 2003
260. Friend erythroleukaemia cell mutants defective in viral gene expression
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Sachiko Yamaguchi-Tejima, Atsuko Suzuki, Hiroshi Yoshikura, Yoshihiro Kitamura, J. Yokota, and Aikichi Iwamoto
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Genes, Viral ,viruses ,Cell ,Mutant ,Spleen ,Biology ,medicine.disease_cause ,Viral gene ,Virus ,Cell Line ,Mice ,Viral Proteins ,Viral Envelope Proteins ,hemic and lymphatic diseases ,Virology ,medicine ,Animals ,Mutation ,Leukemia, Experimental ,Immune Sera ,Complement System Proteins ,Friend murine leukemia virus ,medicine.anatomical_structure ,Cell culture ,Helper virus ,Electrophoresis, Polyacrylamide Gel - Abstract
Cellular mutants defective in the expression of viral polypeptides were isolated from the Friend erythroleukemia cell line 745a by immunoselection with anti-ecotropic murine leukaemia virus serum in the presence of complement. The mode of appearance of the antiserum-resistant cells showed an interesting pattern which is discussed in the text. One of the mutants obtained contained no detectable gp70 or p15(E) while retaining gPr90env; defects appeared to reside in the processing of the gPr90env to gp70 and p15(E). In another type of mutant, gPr90env was not detected. All these mutants retained spleen focus-forming virus (SFFV)-specific gp55 and gag precursor Pr68gag. The mutants superinfected with the helper virus produced the helper and SFFV also, indicating that these mutations did not affect the replication of the exogenously infecting virus.
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- 1984
261. 5' flanking and first intron sequences of the human beta-actin gene required for efficient promoter activity
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Neil G. Miyamoto, Robert M. Frederickson, Aikichi Iwamoto, and Monette R. Micheau
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Base Sequence ,Transcription, Genetic ,Response element ,Molecular Sequence Data ,Restriction Mapping ,CAAT box ,Intron ,Promoter ,Biology ,Serum Response Element ,Transfection ,Molecular biology ,Actins ,Introns ,DNA-Binding Proteins ,Genes ,Transcription (biology) ,Serum response factor ,Mutation ,Genetics ,Humans ,Electrophoretic mobility shift assay ,Promoter Regions, Genetic ,HeLa Cells - Abstract
We have identified a CCAAT box element that is required for the efficient transcription of the human beta-actin gene. Both in vivo transient transfection assays in cultured HeLa cells and in vitro run-off transcription assays in HeLa whole cell extracts demonstrated the requirement of this element for efficient promoter activity. A gel mobility shift assay revealed a Hela nuclear factor that specifically interacted with the beta-actin CCAAT element in vitro; mutation of the first three base pairs of the CCAAT pentanucleotide abolished binding of this factor. Competition gel shift experiments revealed that three sequence elements located within the beta-actin promoter, each containing a CC(A/T)6GG motif similar to that contained within the c-fos serum response element, were able to bind a different nuclear factor, serum response factor (SRF). One of these CC(A/T)6GG motifs is contained within a first intron fragment that enhanced transcription from a heterologous promoter in vivo.
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- 1989
262. CD79 alpha/CD79 beta heterodimers are expressed on pro-B cell surfaces without associated mu heavy chain
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Katsuhiko Ishihara, Mariko Koyama, Tetsuya Nakamura, Aikichi Iwamoto, Hajime Karasuyama, and Jacqueline L. Cordell
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CD79 ,Surface Immunoglobulin ,Immunology ,Cell ,Receptors, Antigen, B-Cell ,Bone Marrow Cells ,Cell Line ,Epitopes ,Mice ,Antigens, CD ,medicine ,Immunology and Allergy ,Animals ,Beta (finance) ,Receptor ,B cell ,B-Lymphocytes ,biology ,Immunoglobulin mu-Chains ,Cell Membrane ,Antibodies, Monoclonal ,General Medicine ,Molecular biology ,medicine.anatomical_structure ,Cell culture ,biology.protein ,Antibody ,Immunoglobulin Heavy Chains ,Dimerization ,CD79 Antigens - Abstract
During B cell development, the surface expression of CD79 alpha/CD79 beta heterodimers had been thought to begin in the pre-B cell stage where the heterodimers constitute pre-B cell receptors together with mu heavy and surrogate light chains. Thereafter, in mature B cells, CD79 alpha/CD79 beta associates with surface Ig to form B cell antigen receptors. In this study, we revealed by using newly established mAb that CD79 beta was expressed on the surface of pro-B cells which had not undergone the productive Ig gene rearrangement. Biochemical analysis showed that CD79 beta on pro-B cells existed either as monomers or as disulfide-linked heterodimers with CD79 alpha, non-covalently associated with four unidentified membrane molecules. Our finding that CD79 beta is expressed on earlier B-lineage cells than previously expected coincides with the recent study in which CD79 beta-deficient mice exhibit a blockade of B cell differentiation at the pro-B cell stage. Thus, it is speculated that the CD79 beta-containing complexes on pro-B cell surfaces may function to induce early B cell differentiation.
263. Detection of Toxoplasma gondii, Epstein-Barr virus, and JC virus DNAs in the cerebrospinal fluid in acquired immunodeficiency syndrome patients with focal central nervous system complications
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Harutaka Katano, Satoshi Kimura, Tomo Wakabayashi, Mieko Goto, Aikichi Iwamoto, Akira Yasuoka, Natsuo Tachikawa, Shinichi Oka, Hiroyuki Gatanaga, and Yoshihiko Hoshino
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Male ,Pathology ,medicine.medical_specialty ,Herpesvirus 4, Human ,JC virus ,medicine.disease_cause ,Polymerase Chain Reaction ,Herpesviridae ,Virus ,hemic and lymphatic diseases ,Internal Medicine ,medicine ,Animals ,Humans ,DNA Primers ,Lymphoma, AIDS-Related ,Acquired Immunodeficiency Syndrome ,Brain Diseases ,biology ,Base Sequence ,business.industry ,Progressive multifocal leukoencephalopathy ,Primary central nervous system lymphoma ,Leukoencephalopathy, Progressive Multifocal ,Toxoplasma gondii ,General Medicine ,DNA, Protozoan ,biology.organism_classification ,medicine.disease ,Epstein–Barr virus ,Virology ,JC Virus ,Toxoplasmosis ,Toxoplasmosis, Cerebral ,DNA, Viral ,Female ,business ,Toxoplasma - Abstract
Object Toxoplasmic encephalitis (TE), primary central nervous system lymphoma (PCNSL) and progressive multifocal leukoencephalopathy (PML) are major central nervous system (CNS) diseases in patients with acquired immunodeficiency syndrome (AIDS). We assessed the diagnostic value of polymerase chain reaction (PCR) in the detection of DNAs of Toxoplasma gondii (T. gondii), Epstein-Barr virus (EBV) and JC virus (JCV) in the cerebrospinal fluid (CSF). Methods We compared the PCR results with those of pathological findings at autopsy. Patients or Materials The present study included 23 autopsies representing those in whom CSF samples were obtained before death while the patient was hospitalized or at autopsy. Results The threshold levels for PCR detection were 4 tachyzoites of T. gondii, 5-15 genomes of EBV and 10 genomes of JCV. We identified T. gondii DNA in 4 out of 5 autopsy-defined cases of TE, EBV DNA in 5 out of 5 cases with PCNSL, and JCV DNA in 2 out of 2 cases with PML. The specificity of PCR was 100% in TE, 78 % in PCNSL, and 100 % in PML. Conclusion Although the number of cases was relatively small in this study, PCR correctly identified T. gondii DNA in those cases in which PML or PCNSL was the sole clinical diagnosis. Our results indicate that PCR examination of CSF is a clinically useful tool for the diagnosis of focal brain lesions in patients with AIDS.(Internal Medicine 38: 556-562, 1999)
264. In vivo sequence variability of human immunodeficiency virus type 1 envelope gp120: Association of V2 extension with slow disease progression
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Yoshiyuki Nagai, Rie Harukuni, Teiichiro Shiino, Masao Fukushima, Yutaka Takebe, Shinichi Oka, Mohammad K. Hasan, Xiaomi Xin, Aikichi Iwamoto, Tatsuo Shioda, Huanliang Liu, and Atsushi Kurotani
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Immunology ,Molecular Sequence Data ,HIV Infections ,Viral quasispecies ,Disease ,Biology ,HIV Envelope Protein gp120 ,Microbiology ,Genome ,law.invention ,Evolution, Molecular ,law ,Virology ,Genetic variation ,Tumor Cells, Cultured ,Humans ,Amino Acid Sequence ,Peptide sequence ,Phylogeny ,Cell Line, Transformed ,Genetics ,Syncytium ,Base Sequence ,Sequence Homology, Amino Acid ,Genetic Variation ,Phenotype ,Insect Science ,DNA, Viral ,Recombinant DNA ,Disease Progression ,HIV-1 ,Research Article - Abstract
According to the rate of depletion of CD4 cell counts, we grouped 12 cases of human immunodeficiency virus type 1 (HIV-1) infection as 6 rapid (21.0 to 33.8 cells per microl per month) and 6 slow (0.9 to 7.9 cells per microl per month) progressors and determined the individual viral quasispecies patterns by sequencing the genome region encoding the V1, V2, and V3 loops of envelope protein. Although the quasispecies structures varied widely from one individual to another, a strong correlation was observed between a low rate of disease progression and a high degree of genetic diversity of HIV-1. Furthermore, the V2 loop extension was observed specifically in individuals with slow or no disease progression, whereas basic amino acid substitutions in V3 characteristic of a viral phenotype shift from non-syncytium inducing to syncytium inducing were observed in patients with advanced stages of disease regardless of their rate of disease progression. Studies with recombinant viruses suggested that elongation of V2 potentially restricts the capacity of HIV-1 to replicate in macrophages. Thus, our results suggest the association of distinct sequence features of both V3 and V2 with particular patterns of disease progression. Elongation of the V2 loop may be a good predictor of slow disease progression, while basic substitutions of V3 without elongation of V2 are characteristic of rapid progression.
265. HIV-1 replicates in human osteoclasts and enhances their differentiation in vitro
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George F. Gao, Yu Zhang, Aikichi Iwamoto, Bin Gao, Jun-ichiro Inoue, Jin Gohda, Takaomi Ishida, Ying Huang, Lijun Gu, Taisheng Li, Yang Han, and Yijing Ma
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musculoskeletal diseases ,Receptors, CXCR4 ,Receptors, CCR5 ,Bone disease ,CD14 ,Cellular differentiation ,Lipopolysaccharide Receptors ,Osteoclasts ,Biology ,Virus Replication ,Iinfection ,Bone resorption ,Bone remodeling ,Osteoclast ,Virology ,medicine ,Humans ,Calcitonin receptor ,Cells, Cultured ,Cathepsin ,Research ,Macrophages ,virus diseases ,Cell Differentiation ,medicine.disease ,medicine.anatomical_structure ,Infectious Diseases ,CD4 Antigens ,Immunology ,HIV-1 ,Cancer research - Abstract
Background HIV-1 infected patients frequently have osteolytic bone disease, which is caused by the dysregulation of the bone remodeling system that involves the interaction between osteoblasts and osteoclasts, but the relationship between osteolytic disease and HIV-1 infection remains unclear. In this study we tested whether HIV-1 infection of osteoclasts affects their differentiation. Results We prepared human osteoclasts from CD14+ monocytes and examined them for their susceptibility to HIV-1. Furthermore, we investigated the effect of HIV-1 infection on osteoclast differentiation. CD14-derived osteoclasts were shown to express CD4, CCR5, and CXCR4 each at the similar level to that shown with macrophages. R5-tropic HIV-1 and X4-tropic HIV-1 were found to infect CD14-derived osteoclasts and replicate in them. Furthermore, HIV-1 infection induced formation of larger osteoclastst, enhanced the expression of mRNAs for three osteoclast specific marker molecules (tartrate-resistant acid phosphatase, cathepsin K, and the calcitonin receptor), and up-regulated osteoclast bone resorption activity. Conclusions Our results suggest that osteoclasts serve as a novel target for HIV-1 infection, which may enhance the osteoclast differentiation contributing to the development of osteolytic disease in HIV-1-infected patients.
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266. The Polymorphisms in DC-SIGNRAffect Susceptibility to HIV Type 1 Infection.
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Nuanjun Wichukchinda, Yoshihiro Kitamura, Archawin Rojanawiwat, Emi E. Nakayama, Haihan Song, Panita Pathipvanich, Wattana Auwanit, Pathom Sawanpanyalert, Aikichi Iwamoto, Tatsuo Shioda, and Koya Ariyoshi
- Abstract
Dendritic cell-specific intercellular adhesion molecule-3 (ICAM-3) grabbing nonintegrin (DC-SIGN)and its homologue DC-SIGNR (DC-SIGNrelated) have been thought to play an important role in establishing HIV infection by enhancing trans-infection of CD4T cells in the regional lymph nodes. To identify polymorphisms associated with HIV-exposed seronegative (ESN) individuals in Thais, genomic DNA from 102 HIV-seronegative individuals of HIV-seropositive spouses, 305 HIV-seropositive individuals, and 290 HIV-seronegative blood donors was genotyped for two single nucleotide polymorphisms (SNPs) in DC-SIGNpromoter (−139AG and 336AG), a repeat number of 69 bp in Exon 4 of DC-SIGNand DC-SIGNR, and one SNP in Exon 5 of DC-SIGNR(rs2277998AG). We found that the proportion of individuals possessing a heterozygous 75 and 95 repeat and A allele at rs2277998 of DC-SIGNRin HIV-seronegative individuals of HIV-seropositive spouses was significantly higher than HIV-seropositive individuals [p 0.0373, OR (95 CI) 0.57 (0.32,1.01); p 0.0232, OR (95 CI) 0.38 (0.15,0.98); and p 0.0445, OR (95 CI) 0.61 (0.37,1.02), respectively]. Analysis after stratifying by gender showed that these associations were observed only in females but not in males. Moreover, HIV-seropositive females tend to have a homozygous 77 repeat more frequently than HIV-seronegative females with a marginal level of significance [p 0.0556, OR (95 CI) 1.79 (0.94,3.40)]. Haplotype analysis showed that the proportion of individuals possessing the 5A haplotype in HIV-seronegative females was significantly higher than HIV-seropositive females [p 0.0133, OR 0.50 (0.27,0.90)]. These associations suggest that DC-SIGNRmay affect susceptibility to HIV infection by a mechanism that is different in females and males. Further studies are warranted to investigate the mechanisms of their function. [ABSTRACT FROM AUTHOR]
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- 2007
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267. Conserved Vδ1 Binding Geometry in a Setting of Locus-Disparate pHLA Recognition by δ/αβ T Cell Receptors (TCRs): Insight into Recognition of HIV Peptides by TCRs.
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Yi Shi, Ai Kawana-Tachikawa, Feng Gao, Jianxun Qi, Chuansheng Liu, Jia Gao, Hao Cheng, Takamasa Ueno, Aikichi Iwamoto, and Gao, George F.
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VIRUS identification , *T cell receptors , *HIV , *MAJOR histocompatibility complex , *COEVOLUTION , *LOCUS (Genetics) , *GENETICS - Abstract
Given a limited set of TCR V genes which are used to create TCRs that are reactive to different ligands, such as MHC class I, MHC class II and MHC-like proteins (for example, MIC molecules and CD1 molecules), the Vδ1 segment can be rearranged with Dδ-Jδ-Cδ or Jα-Cα segments, to form classical γδTCR or uncommon αβTCR using a Vδ1 segment (δ/αβTCR). Here we have determined two complex structures of the δ/αβTCRs (S19-2 and TU55) bound to different locus-disparate MHCIs with HIV peptides (HLA-A*2402-Nef138-10 and HLA-B*3501-Pol448-9). The overall binding modes resemble classical αβTCRs, but display a strong tilt binding geometry of Vδ1 domain towards the HLA α1 helix, due to a conserved extensive interaction between the CDR1δ loop and N-terminal region of α1 helix (mainly in position 62). The aromatic amino acids of the CDR1δ loop exploit different conformations ("aromatic ladder" or "aromatic hairpin") to accommodate distinct MHC helical scaffolds. This tolerance helps to explain how a particular TCR V region can similarly dock onto multiple MHC molecules and thus may potentially explain the nature of TCR cross-reactivity. In addition, the length of the CDR3δ loop could affect the extent of tilt binding of the Vδ1 domain, and adaptively, the pairing Vδ domains adjust their mass centers to generate differential MHC contacts, hence probably ensuring TCR specificity for a certain peptide-MHC class I (pMHC-I). Our data have provided further structural insights into the TCR recognition of classical pMHC-I molecules, unifying cross-reactivity and specificity. IMPORTANCE The specificity of αβ T cell recognition is determined by the CDR loops of the αβTCR, and the general mode of binding of αβTCRs to pMHC has been established over the last decade. Due to the intrinsic genomic structure of the TCR α/δ chain locus, some Vδ segments can rearrange with the Cα segment, forming a hybrid VδCαVβCβ TCR, the δ/αβTCR. However, the basis for the molecular recognition of such TCRs of their ligands is elusive. Here an αβTCR using the Vδ1 segment, S19-2, was isolated from an HIV-infected patient in an HLA-A*24:02-restricted manner. We then solved the crystal structures of the S19-2 TCR and another δ/αβTCR, TU55, bound to their respective ligands, revealing a conserved Vδ1 binding feature. Further binding kinetics analysis revealed that the S19-2 and TU55 TCRs bind pHLA very tightly and in a long-lasting manner. Our results illustrate the mode of binding of a TCR using the Vδ1 segment to its ligand, virus-derived pHLA. [ABSTRACT FROM AUTHOR]
- Published
- 2017
- Full Text
- View/download PDF
268. Anti-APOBEC3G Activity of HIV-1 Vif Protein Is Attenuated in Elite Controllers.
- Author
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Tadashi Kikuchi, Yukie Iwabu, Takuya Tada, Ai Kawana-Tachikawa, Michiko Koga, Noriaki Hosoya, Shigeru Nomura, Brumme, Zabrina L., Jessen, Heiko, Pereyra, Florencia, Trocha, Alicja, Walker, Bruce D., Aikichi Iwamoto, Kenzo Tokunaga, and Toshiyuki Miura
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VESICULAR stomatitis , *VIREMIA , *VIRUS diseases , *APOLIPOPROTEIN B , *LUCIFERASES - Abstract
HIV-1-infected individuals who control viremia to below the limit of detection without antiviral therapy have been termed elite controllers (EC). Functional attenuation of some HIV-1 proteins has been reported in EC. The HIV-1 accessory protein Vif (virion infectivity factor) enhances viral infectivity through anti-retroviral factor apolipoprotein B mRNA editing enzyme catalytic polypeptide-like 3G (APOBEC3G) degradation; however, little is known regarding Vif function in EC. Here, the anti-APOBEC3G activities of clonal, plasma HIV RNA-derived Vif sequences from 46 EC, 46 noncontrollers (NC), and 44 individuals with acute infection (AI) were compared. Vesicular stomatitis virus glycoprotein (VSV-G)-pseudotyped viruses were generated by cotransfecting 293T cells with expression plasmids encoding patient-derived Vif, human APOBEC3G, VSV-G, and a vif/env-deficient luciferase-reporter HIV-1 proviral DNA clone. Viral stocks were used to infect 293T cells, and Vif anti-APOBEC3G activity was quantified in terms of luciferase signal. On average, the anti-APOBEC3G activities of EC-derived Vif sequences (median log10 relative light units [RLU], 4.54 [interquartile range {IQR}, 4.30 to 4.66]) were significantly lower than those of sequences derived from NC (4.75 [4.60 to 4.92], P<0.0001) and AI (4.74 [4.62 to 4.94], P<0.0001). Reduced Vif activities were not associated with particular HLA class I alleles expressed by the host. Vif functional motifs were highly conserved in all patient groups. No single viral polymorphism could explain the reduced anti-APOBEC3G activity of EC-derived Vif, suggesting that various combinations of minor polymorphisms may underlie these effects. These results further support the idea of relative attenuation of viral protein function in EC-derived HIV sequences. [ABSTRACT FROM AUTHOR]
- Published
- 2015
- Full Text
- View/download PDF
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