201. WASp Deficiency Selectively Affects the TCR Diversity of Different Memory T Cell Subsets in WAS Chimeric Mice
- Author
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Wenyan Li, Yanjun Jia, Yanping Wang, Qin Zhao, Lu Yang, Ting Zeng, Linlin Niu, Rongxin Dai, Yanan Li, Xiaodong Zhao, and Junfeng Wu
- Subjects
Wiskott–Aldrich Syndrome ,memory T cell ,T cell receptor repertoire ,high-throughput sequencing ,chimeric mouse model ,Immunologic diseases. Allergy ,RC581-607 - Abstract
BackgroundThe T cell receptor (TCR) diversity is essential for effective T cell immunity. Previous studies showed that TCR diversity in Wiskott–Aldrich Syndrome (WAS) patients was severely impaired, especially in the memory T cell populations. Whether this defect was caused by intrinsic WASp deficiency or extrinsic reasons is still unclear.MethodsWe sorted different T cell subsets from the bone marrow chimeric mice model using both magnetic beads and flow cytometry. TCR repertoires of memory T cells, especially CD4+ effector memory T (TEM) cells and CD8+ central memory T (TCM) cells, were analyzed using the UMI quantitative high-throughput sequencing (HTS).ResultsAn average of 5.51 million sequencing reads of 32 samples was obtained from the Illumina sequencing platform. Bioinformatic analyses showed that compared with wild type (WT), WAS knock out (KO)-CD4+ TEM cells exhibited increased Simpson index and decreased D50 index (P
- Published
- 2022
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